ROD1 regulator of differentiation 1 (S. pombe) (Rod1)

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Finding cDNAs

UGID:1967382 UniGene Rn.162818 Rattus norvegicus (Norway rat) Rod1

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ROD1 regulator of differentiation 1 (S. pombe) (Rod1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_112636.1	ROD1 regulator of differentiation 1	R. norvegicus	100.0	522
NP_835458.1	ROD1 regulator of differentiation 1 isoform 2	M. musculus	99.2	522
NP_005147.3	ROD1 regulator of differentiation 1	H. sapiens	95.5	537
XP_001335967.1	PREDICTED: similar to ROD1 regulator of differentiation 1	D. rerio	83.3	521
NP_001080169.1	polypyrimidine tract binding protein 1	X. laevis	77.0	533
NP_524703.1	hephaestus, isoform C	D. melanogaster	55.7	579
NP_741041.1	human PTB (hnRNP) homolog family member (ptb-1)	C. elegans	49.7	601

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; prostate; brain; connective tissue; embryonic tissue; spleen

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	5
	Map position:	5q24

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AB023966.1	Rattus norvegicus mRNA for Rod1, complete cds	P
	NM_031346.1	Rattus norvegicus ROD1 regulator of differentiation 1 (S. pombe) (Rod1), mRNA	P

EST sequences (15)

AI111880.1	Clone UI-R-A1-ec-h-09-0-UI	mixed	3' read	A
AI555171.1	Clone UI-R-C2p-qt-f-04-0-UI	mixed	3' read	PA
BE117776.1	Clone UI-R-BS1-azf-g-12-0-UI	embryonic tissue	3' read	PA
BF545100.1	Clone UI-R-C2p-qt-f-04-0-UI	mixed	5' read	P
BF550279.1	Clone UI-R-A1-ec-h-09-0-UI	mixed	5' read
BU670767.1	Clone IMAGE:5597838	prostate	5' read	P
CA508575.1	Clone IMAGE:7356047	connective tissue	3' read	A
CB693267.1	Clone srpb2-00046-a2	prostate	5' read	P
CB707748.1	Clone mrpe4-00307-b5	mixed	5' read	P
CB772165.1	Clone srpb2-00124-g4	prostate	5' read
CB809751.1	Clone nrhy5-00255-b3	brain	5' read	P
CB724653.1		brain	5' read
CO571153.1	Clone IMAGE:7365924	spleen	5' read	P
DY309743.1	Clone IMAGE:8367988	brain	5' read
FM074295.1	Clone etnoaorP0021D10		5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria