R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|11282423|pir||T45676 hypothetical protein F14P22.150 - Arabidopsis thaliana
>gi|6735373|emb|CAB68194.1| (AL137082) putative protein
[Arabidopsis thaliana]
Length = 597
Frame 2 hits (HSPs): _______
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 597
0 150 300 450
Plus Strand HSPs:
Score = 316 (111.2 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
Identities = 67/80 (83%), Positives = 70/80 (87%), Frame = +2
Query: 2 HGYYGLYKRK--EVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQ 175
HGY GL+KRK EV+ GNTNTIDGCATFFRRDRFSHV EFNKAAQSLTEA IP +Q
Sbjct: 316 HGYQGLFKRKTNEVFIGNTNTIDGCATFFRRDRFSHV-----EFNKAAQSLTEAIIPVSQ 370
Query: 176 KKTALNRLVKDNVALIVVLEAK 241
KK ALNRLVKDNVALIVVLEAK
Sbjct: 371 KKNALNRLVKDNVALIVVLEAK 392
Score = 131 (46.1 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
Identities = 24/26 (92%), Positives = 25/26 (96%), Frame = +1
Query: 262 DNPGKRQLLCVANTHVNVPQDLKDVK 339
DNPGKRQLLCVANTHVNVP +LKDVK
Sbjct: 399 DNPGKRQLLCVANTHVNVPHELKDVK 424
>gi|11282424|pir||T45678 hypothetical protein F14P22.170 - Arabidopsis thaliana
>gi|6735375|emb|CAB68196.1| (AL137082) putative protein
[Arabidopsis thaliana]
Length = 605
Frame 2 hits (HSPs): __ _______
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | || 605
0 150 300 450 600
Plus Strand HSPs:
Score = 331 (116.5 bits), Expect = 8.5e-37, Sum P(2) = 8.5e-37
Identities = 66/82 (80%), Positives = 72/82 (87%), Frame = +2
Query: 2 HGYYGLYKRK--EVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQ 175
HGY LYKRK EV SG+T+ IDGCATFFRRDRFSHV KY+VEFNKAAQSLT+A IP Q
Sbjct: 319 HGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAAQSLTDALIPQAQ 378
Query: 176 KKTALNRLVKDNVALIVVLEAK 241
K+TALNRLVKDN+ALIVVLEAK
Sbjct: 379 KRTALNRLVKDNIALIVVLEAK 400
Score = 103 (36.3 bits), Expect = 8.5e-37, Sum P(2) = 8.5e-37
Identities = 22/28 (78%), Positives = 23/28 (82%), Frame = +1
Query: 262 DNPGKRQLLCV--ANTHVNVPQDLKDVK 339
D GKRQL+CV ANTHVNV QDLKDVK
Sbjct: 407 DPSGKRQLICVVLANTHVNVQQDLKDVK 434
Score = 43 (15.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 9/21 (42%), Positives = 12/21 (57%), Frame = +2
Query: 59 IDGCATFF-RRDRFSHVXKYE 118
+ GC T+ D SHV K+E
Sbjct: 173 VGGCKTYTPTADDISHVLKFE 193
>gi|11360082|pir||T42705 hypothetical protein DKFZp434K098.1 - human (fragment)
>gi|6453600|emb|CAB61415.1| (AL133112) hypothetical protein [Homo
sapiens]
Length = 348
Frame 2 hits (HSPs): ___________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 348
0 150 300
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/77 (35%), Positives = 47/77 (61%), Frame = +2
Query: 5 GYYGLYKRKEVYSGNTNT-IDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQKK 181
G++ R ++ S +DGCA FF+ ++F+ V K+ VEFN+ A + ++ + +
Sbjct: 54 GFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGS------E 107
Query: 182 TALNRLV-KDNVALIVVLE 235
LNR++ KDN+ + VVLE
Sbjct: 108 AMLNRVMTKDNIGVAVVLE 126
Score = 49 (17.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 10/21 (47%), Positives = 14/21 (66%), Frame = +1
Query: 277 RQLLCVANTHVNVPQDLKDVK 339
+QLL VAN H++ + DVK
Sbjct: 144 KQLLIVANAHMHWDPEYSDVK 164
>gi|6330365|dbj|BAA86508.1| (AB033020) KIAA1194 protein [Homo sapiens]
Length = 575
Frame 2 hits (HSPs): ________
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | | 575
0 150 300 450
Plus Strand HSPs:
Score = 113 (39.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 28/79 (35%), Positives = 47/79 (59%), Frame = +2
Query: 5 GYYGLYKRKE----VYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTT 172
GY G + K + +DGCA FF+ ++F+ V K+ VEFN+ A + +E +
Sbjct: 276 GYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS---- 331
Query: 173 QKKTALNRLV-KDNVALIVVLEAK 241
+ LNR++ KDN+ + V+LE +
Sbjct: 332 --EAMLNRVMTKDNIGVAVLLELR 353
Score = 48 (16.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 9/22 (40%), Positives = 15/22 (68%), Frame = +1
Query: 274 KRQLLCVANTHVNVPQDLKDVK 339
++QL+ VAN H++ + DVK
Sbjct: 369 EKQLILVANAHMHWDPEYSDVK 390
>gi|7493814|pir||T18239 transcription effector - yeast (Candida albicans)
(fragment) >gi|3859723|emb|CAA21997.1| (AL033501)
glucose-repressible alcohol dehydrogenase transcriptional effector
[Candida albicans]
Length = 589
Frame 2 hits (HSPs): _________
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | 589
0 150 300 450
Plus Strand HSPs:
Score = 116 (40.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 31/90 (34%), Positives = 50/90 (55%), Frame = +2
Query: 2 HGYYGLY----KRKEVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPT 169
+GY G + + K + ++ +DGCATFF+ D+FS V K E+N S+ +
Sbjct: 326 NGYKGYFFSKTRSKTMSETDSKKVDGCATFFKNDKFSLVHKQNFEYN----SVCMGSDKY 381
Query: 170 TQKKTALNRLV-KDNVALIVVLEAKVNIXLILII 268
+ K NR + KDN+ALI L+ K + I ++
Sbjct: 382 KKTKDLFNRFMNKDNIALISYLQHKESGEKIAVV 415
Score = 35 (12.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 7/18 (38%), Positives = 10/18 (55%), Frame = +1
Query: 286 LCVANTHVNVPQDLKDVK 339
+ V NTH++ DVK
Sbjct: 412 IAVVNTHLHWDPAFNDVK 429
>gi|6319298 ref|NP_009381.1| 95 kDa containng leucine rich tandem repeats;
Ccr4p [Saccharomyces cerevisiae] >gi|486964|pir||S36713 CCR4
protein - yeast (Saccharomyces cerevisiae)
>gi|171854|gb|AAC04936.1| (L05146) Ccr4p: Carbon catabolite
repressor protein [Saccharomyces cerevisiae]
Length = 837
Frame 2 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | | 837
0 150 300 450 600 750
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 0.00033, P = 0.00033
Identities = 28/79 (35%), Positives = 47/79 (59%), Frame = +2
Query: 2 HGYYGLY----KRKEVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPT 169
HGY G++ + K ++S ++ +DGC FF+RD+F + K ++F+ A +
Sbjct: 573 HGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSGAW--MKHKKFQR 630
Query: 170 TQKKTALNRLV-KDNVALIVVLE 235
T+ LNR + KDNVAL + L+
Sbjct: 631 TEDY--LNRAMNKDNVALFLKLQ 651
>gi|399207|sp|P31384|CCR4_YEAST GLUCOSE-REPRESSIBLE ALCOHOL DEHYDROGENASE
TRANSCRIPTIONAL EFFECTOR (CARBON CATABOLITE REPRESSOR PROTEIN 4)
>gi|261567|gb|AAB24455.1| (S50459) CCR4=glucose-repressible alcohol
dehydrogenase transcriptional effector [Saccharomyces cerevisiae,
Peptide, 837 aa]
Length = 837
Frame 2 hits (HSPs): _____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | | 837
0 150 300 450 600 750
__________________
Annotated Domains:
DOMO DM00016: LRRREPEAT 361..388
Entrez Domain: POLY-GLN. 15..24
Entrez Domain: ASN-RICH. 77..103
Entrez Domain: POLY-ASN. 89..103
Entrez Domain: GLN-RICH. 190..206
Entrez Domain: LEUCINE-RICH REPEATS. 350..467
Entrez Repetitive region: LRR 1. 350..372
Entrez Repetitive region: LRR 2. 373..395
Entrez Repetitive region: LRR 3. 396..418
Entrez Repetitive region: LRR 4. 419..444
Entrez Repetitive region: LRR 5. 445..467
PFAM LRR: Leucine Rich Repeat 358..380
PFAM LRR: Leucine Rich Repeat 381..403
PRODOM PD051477: CCR4_YEAST 25..77
PRODOM PD121798: CCR4_YEAST 104..367
PRODOM PD000020: PGS2(21) ALS(20) CYAA(15) 369..438
PRODOM PD007738: 446..673
PRODOM PD040616: CCR4(1) O74874(1) Q23370(1) 675..825
__________________
Plus Strand HSPs:
Score = 110 (38.7 bits), Expect = 0.00033, P = 0.00033
Identities = 28/79 (35%), Positives = 47/79 (59%), Frame = +2
Query: 2 HGYYGLY----KRKEVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPT 169
HGY G++ + K ++S ++ +DGC FF+RD+F + K ++F+ A +
Sbjct: 573 HGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSGAW--MKHKKFQR 630
Query: 170 TQKKTALNRLV-KDNVALIVVLE 235
T+ LNR + KDNVAL + L+
Sbjct: 631 TEDY--LNRAMNKDNVALFLKLQ 651
>gi|7492369|pir||T41453 probable alcohol dehydrogenase repressor protein -
fission yeast (Schizosaccharomyces pombe) >gi|7493070|pir||T41296
probable alcohol dehydrogenase repressor protein - fission yeast
(Schizosaccharomyces pombe) >gi|3702632|emb|CAA21225.1| (AL031824)
putative global transcriptional regulator; putative ccr4 subunit
homologue [Schizosaccharomyces pombe] >gi|3859080|emb|CAA21957.1|
(AL033406) similar to yeast glucose-repressible alcohol
dehydrogenase transcriptional effector (carbon catabolite repressor
protein 4) [Schizosaccharomyces pombe]
Length = 690
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | 690
0 150 300 450 600
Plus Strand HSPs:
Score = 108 (38.0 bits), Expect = 0.00043, P = 0.00043
Identities = 30/89 (33%), Positives = 50/89 (56%), Frame = +2
Query: 5 GYYGL-YKRKEVYSGNT---NTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTT 172
GY G+ + + V + N +DGCATFF+ ++ K +E+N+A SL I T
Sbjct: 405 GYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMVIEYNQAP-SLRRQDIKLT 463
Query: 173 QKKTALNRLV-KDNVALIVVLEAKVNIXLILI 265
NR++ KDN+++I +LE K N +++
Sbjct: 464 SNM--YNRVMTKDNISVITLLENKENGSRLIV 493
>gi|7301122|gb|AAF56256.1| (AE003746) CG5534 gene product [Drosophila
melanogaster]
Length = 278
Frame 2 hits (HSPs): ___________
__________________________________________________
Database sequence: | | | | | | | 278
0 50 100 150 200 250
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00079, P = 0.00079
Identities = 23/63 (36%), Positives = 37/63 (58%), Frame = +2
Query: 59 IDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQKKTALNRLV-KDNVALIVVLE 235
+DGCA FFR +F+ + + +EFN+ A + E + LNR++ KDN+ L +L+
Sbjct: 9 VDGCAIFFRASKFTLIKESLIEFNQLAMANAEGS------DNMLNRVMPKDNIGLAALLK 62
Query: 236 AKVN 247
K N
Sbjct: 63 VKEN 66
>gi|7508858|pir||T33226 hypothetical protein W02G9.5 - Caenorhabditis elegans
>gi|3165572|gb|AAC17686.1| (AF067946) similar to S. cerevisiae
glucose-repressible alcohol dehydrogenase transcriptional effector
(SW:P31384) [Caenorhabditis elegans]
Length = 307
Frame 2 hits (HSPs): ____________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | | | 307
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 78 (27.5 bits), Expect = 0.0038, Sum P(2) = 0.0038
Identities = 27/88 (30%), Positives = 41/88 (46%), Frame = +2
Query: 2 HGYYGLYKRKEVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQKK 181
+GY G+YK+K G DGCA F+ +F V EV + +++ I
Sbjct: 144 YGYEGVYKQK---FGTQQKDDGCALFYHPAKFELVANQEVNY-----FISDTAIS----- 190
Query: 182 TALNRLVKDNVALIVVLEAKVNIXLILI 265
NR +N+A IV L ++ LIL+
Sbjct: 191 ---NR---ENIAQIVALRCRITKELILV 212
Score = 46 (16.2 bits), Expect = 0.0038, Sum P(2) = 0.0038
Identities = 9/21 (42%), Positives = 15/21 (71%), Frame = +1
Query: 277 RQLLCVANTHVNVPQDLKDVK 339
++L+ VANTH+ ++ DVK
Sbjct: 207 KELILVANTHLLFNEERGDVK 227
>gi|7510838|pir||T27632 hypothetical protein ZC518.3a - Caenorhabditis elegans
>gi|5824882|emb|CAB54511.1| (Z68753) predicted using
Genefinder~Similarity to Glucose-repressible alcoihol dehydrogenase
transcriptional effector (SW:CCR4_YEAST), contains similarity to
Pfam domain: PF00560 (Leucine Rich Repeat), Score=42.1,
E-value=4e-09, N=4~cDNA EST EMBL:T0185>
Length = 787
Frame 2 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | | 787
0 150 300 450 600 750
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.043, P = 0.042
Identities = 26/82 (31%), Positives = 48/82 (58%), Frame = +2
Query: 5 GYYGLYKRKE----VYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTT 172
GY G+++ K + +DGCA F++ D+F +Y EF+ A + +A+ T+
Sbjct: 470 GYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVA--MKKAS--TS 525
Query: 173 QKKTALNRLV-KDNVALIVVLEAKVNI 250
+ LNR++ +DN+ L VL+ K ++
Sbjct: 526 ENM--LNRVMPRDNIGLCAVLKIKESV 550
>gi|7510839|pir||T27633 hypothetical protein ZC518.3b - Caenorhabditis elegans
>gi|5824883|emb|CAB54512.1| (Z68753) contains similarity to Pfam
domain: PF00560 (Leucine Rich Repeat), Score=42.1, E-value=4e-09,
N=4 [Caenorhabditis elegans]
Length = 794
Frame 2 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | | | | 794
0 150 300 450 600 750
Plus Strand HSPs:
Score = 90 (31.7 bits), Expect = 0.043, P = 0.042
Identities = 26/82 (31%), Positives = 48/82 (58%), Frame = +2
Query: 5 GYYGLYKRKE----VYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTT 172
GY G+++ K + +DGCA F++ D+F +Y EF+ A + +A+ T+
Sbjct: 477 GYAGIFEAKSRAKTMGEEERKYVDGCAIFWKVDKFDMDKQYLFEFSSVA--MKKAS--TS 532
Query: 173 QKKTALNRLV-KDNVALIVVLEAKVNI 250
+ LNR++ +DN+ L VL+ K ++
Sbjct: 533 ENM--LNRVMPRDNIGLCAVLKIKESV 557
>gi|11994114|dbj|BAB01117.1| (AB026658) gene_id:MYF24.23~unknown protein
[Arabidopsis thaliana]
Length = 445
Frame 2 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | 445
0 150 300
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.056, P = 0.054
Identities = 19/73 (26%), Positives = 41/73 (56%), Frame = +2
Query: 5 GYYGLYKRKEVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQ--SLTEATIPTTQK 178
GY G YKR+ +G+ +DGCA F++ DRF + + +EF++ ++ + + +K
Sbjct: 177 GYAGSYKRR---TGDN--VDGCAMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRK 231
Query: 179 KTALNRLVKDNVALI 223
+++ N+ ++
Sbjct: 232 SNKSRKILLGNIHVL 246
>gi|5823642|emb|CAB53830.1| (AJ242593) gp41 [Bacteriophage A118]
Length = 93
Frame 2 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | | 93
0 20 40 60 80
Plus Strand HSPs:
Score = 68 (23.9 bits), Expect = 0.46, P = 0.37
Identities = 21/64 (32%), Positives = 29/64 (45%), Frame = +2
Query: 53 NTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVL 232
NTI +D+ + K EVE N S+ AT+ T+ A N L ++ I L
Sbjct: 30 NTIKNILDLLEKDQELKIIKMEVELNGVDDSIENATLLGTRLSEA-NSLAEELARTINSL 88
Query: 233 EAKV 244
E KV
Sbjct: 89 EIKV 92
>gi|12322547|gb|AAG51276.1|AC027135_17 (AC027135) hypothetical protein
[Arabidopsis thaliana] >gi|12597833|gb|AAG60143.1|AC074360_8
(AC074360) hypothetical protein [Arabidopsis thaliana]
Length = 335
Frame 2 hits (HSPs): ____________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | 335
0 150 300
Plus Strand HSPs:
Score = 70 (24.6 bits), Expect = 0.68, Sum P(2) = 0.49
Identities = 23/79 (29%), Positives = 39/79 (49%), Frame = +2
Query: 5 GYYGLYKRKEVYSGNTNTIDGCATFFRRDRFSHVXKYEVEFNKAAQSLTEATIPTTQKKT 184
GY G+Y ++ +G DGCA F++ V K +E+N S+ ++ +++K
Sbjct: 63 GYSGIYIQR---TGQRKR-DGCAIFYKPSCAELVTKERIEYNDLVDSIKADSVSCSEQKI 118
Query: 185 ALNRLVK-DNVAL--IVVLEAK 241
+ K D A V+LE K
Sbjct: 119 ETSNEGKGDEKAKDKFVLLEEK 140
Score = 44 (15.5 bits), Expect = 0.68, Sum P(2) = 0.49
Identities = 9/21 (42%), Positives = 14/21 (66%), Frame = +1
Query: 277 RQLLCVANTHVNVPQDLKDVK 339
+ ++ VANTH+ +L DVK
Sbjct: 173 QHIVIVANTHLYWDPELADVK 193
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.87
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.363 0.159 0.616
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.329 0.141 0.416
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.359 0.159 0.657
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.354 0.157 0.618
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.342 0.150 0.526
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.353 0.155 0.504
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 113 109 10. 69 3 12 22 0.12 32
29 0.12 34
+2 0 113 109 10. 69 3 12 22 0.12 32
29 0.12 34
+1 0 113 112 10. 70 3 12 22 0.12 32
29 0.096 35
-1 0 113 110 10. 69 3 12 22 0.12 32
29 0.12 34
-2 0 113 109 10. 69 3 12 22 0.12 32
29 0.12 34
-3 0 113 109 10. 69 3 12 22 0.12 32
29 0.12 34
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 15
No. of states in DFA: 596 (59 KB)
Total size of DFA: 163 KB (192 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 107.82u 1.23s 109.05t Elapsed: 00:00:19
Total cpu time: 107.85u 1.26s 109.11t Elapsed: 00:00:19
Start: Wed Jan 30 19:13:01 2002 End: Wed Jan 30 19:13:20 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000