SNP:  Handle|local_snp_id:   KWOK | OVLP-000925-335952
  NCBI Assay Id(ss#):    ss1690200
  Reference SNP Id(rs#): rs268877

Batch Detail:
Submitter Handle:           KWOK
Submitter Batch ID:         OVLP-000925-2-0
Entry Date:                 Oct 05, 2000
Molecular type:             Genomic
No. of Chromosomes sampled: 4
Synonym defined:             
Organism:                   Homo sapiens
Population:                 Not submitted
Submitter Method ID:        OverlapSnpDetectionWithPolyBayes
Method Extra:
   Success rate is assigned as the SNP probability score computed by the
   POLYBAYES SNP discovery program
   Overlap detection parameters
       MinTotalOverlapLength:6000
       MinDiscrepancyRate:0.002
       MaxDiscrepancyRate:0.0001
   SNP detection parameters (PolyBayes)
       ExpectedPolymorphismRateBetweenPairs:0.001

Citation:
   1. A general approach to single-nucleotide polymorphism discovery
   2. Overlapping genomic sequences: a treasure trove of single-nucleotide
   polymorphisms

   View citation details:[1] [2] 
Comment:
   submitted value for SNPASSAY-POPULATION tag: LargeInsertGenomicCl


  SubSNP Detail:
  NCBI Assay ID:       ss1690200
  Submitter SNP ID:    OVLP-000925-335952
  Synonyms:             
  LOCUSID:             Not submitted
  Submitter STS ID:    Not submitted
  STS Accession:       Not submitted
  GenBanK Accession:   AC034121.2 AC007318.3 
  Comment:
     For parameters, see batch record.
     SNP-specific information (for explanation, see method record).
	 SequenceLocalName1:AC007318
	 SequenceAccession1:AC007318
	 SequenceVersion1:3
	 SequenceContigName1:Contig2
	 SequenceContigPosition1:12363
	 SequenceLocalName2:AC034121
	 SequenceAccession2:AC034121
	 SequenceVersion2:2
	 SequenceContigName2:Contig31
	 SequenceContigPosition2:2350
	 PolyBayesConfidence:99

  Gene Name:           
  Length:              401
  Flanking Sequence Information:

  5' Assay:   GCATGCAGGC AAACTTATCT GTTCAAATTG AGGTAAAACA GACAAAAAAC ACTTAATATT
              AACAGAAGCT ACATAATTAA AACTAACCTT CTGCTGCTTA TTTAAGCTAA TGATGTATTC
              TTACCAAACA GAGACCCTCA AGTCAATCAT TTCTTTTGAT TTTAGTTACC ACCCCCAAAT
              TAAGCCTCTT CTTTCAAAGC
  Observed:   T/C
  3' Assay:   ATTATTAGTT AAAAAAAAGT TTTAAAATGA AGAAAAATAT TTTTTCCAGA ACTTGTATTT
              TGTAATTAGT GTGATGCAAT TTCTTTTTAT TTTTCAAACT TAGAAATAAC TCATGTATGG
              TACTATTTGG TATTTTTTTC AGATACCAAG GAATACCGAC AGGATTCATA AATAGGATTT
              TCTGACACTG GCAGGAAAGT