BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu0405
(84 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24378936|ref|NP_720891.1| hypothetical protein SMU.447 [... 110 2e-23
gi|15675547|ref|NP_269721.1| hypothetical protein SPy_1687 ... 93 4e-18
gi|157076192|gb|ABV10875.1| conserved hypothetical protein ... 91 2e-17
gi|22536455|ref|NP_687306.1| hypothetical protein SAG0271 [... 91 2e-17
gi|15901323|ref|NP_345927.1| hypothetical protein SP_1473 [... 90 3e-17
gi|149019422|ref|ZP_01834784.1| hypothetical protein CGSSp2... 90 4e-17
gi|125718676|ref|YP_001035809.1| Conserved uncharacterized ... 90 5e-17
gi|149011705|ref|ZP_01832901.1| hypothetical protein CGSSp1... 89 5e-17
gi|55820589|ref|YP_139031.1| hypothetical protein stu0508 [... 89 9e-17
gi|116627394|ref|YP_820013.1| hypothetical protein STER_054... 88 2e-16
gi|81177282|ref|ZP_00876129.1| protein of unknown function ... 87 2e-16
gi|29376143|ref|NP_815297.1| hypothetical protein EF1580 [E... 70 4e-11
gi|138894850|ref|YP_001125303.1| hypothetical protein GTNG_... 65 1e-09
gi|56419866|ref|YP_147184.1| hypothetical protein GK1331 [G... 62 8e-09
gi|56963930|ref|YP_175661.1| hypothetical protein ABC2165 [... 62 9e-09
gi|81428885|ref|YP_395885.1| hypothetical protein LSA1274 [... 61 2e-08
gi|16803344|ref|NP_464829.1| hypothetical protein lmo1304 [... 60 4e-08
gi|46907531|ref|YP_013920.1| hypothetical protein LMOf2365_... 59 7e-08
gi|116872735|ref|YP_849516.1| hypothetical protein lwe1319 ... 59 9e-08
gi|16078851|ref|NP_389671.1| hypothetical protein BSU17880 ... 59 1e-07
gi|70726567|ref|YP_253481.1| hypothetical protein SH1566 [S... 58 1e-07
gi|16800410|ref|NP_470678.1| hypothetical protein lin1342 [... 58 1e-07
gi|47094163|ref|ZP_00231882.1| conserved hypothetical prote... 58 1e-07
gi|153166681|ref|ZP_01927204.1| hypothetical protein LMHG_0... 58 1e-07
gi|68056500|ref|ZP_00540617.1| protein of unknown function ... 58 2e-07
gi|89208871|ref|ZP_01187352.1| Protein of unknown function ... 58 2e-07
gi|149183288|ref|ZP_01861730.1| hypothetical protein BSG1_1... 57 2e-07
gi|30263635|ref|NP_846012.1| hypothetical protein BA3752 [B... 57 3e-07
gi|90961517|ref|YP_535433.1| hypothetical protein LSL_0541 ... 57 3e-07
gi|154686201|ref|YP_001421362.1| YnzC [Bacillus amyloliquef... 57 4e-07
gi|30021785|ref|NP_833416.1| hypothetical protein BC3688 [B... 56 6e-07
gi|52080410|ref|YP_079201.1| conserved protein YnzC [Bacill... 56 6e-07
gi|114794349|pdb|2HEP|A Chain A, Solution Nmr Structure Of ... 56 7e-07
gi|15614916|ref|NP_243219.1| hypothetical protein BH2353 [B... 55 9e-07
gi|116333963|ref|YP_795490.1| hypothetical protein LVIS_135... 55 1e-06
gi|15924331|ref|NP_371865.1| hypothetical protein SAV1341 [... 54 2e-06
gi|27467942|ref|NP_764579.1| hypothetical protein SE1024 [S... 54 2e-06
gi|15925563|ref|NP_373097.1| hypothetical protein SAV2573 [... 54 3e-06
gi|116511936|ref|YP_809152.1| hypothetical protein LACR_119... 54 3e-06
gi|15673079|ref|NP_267253.1| hypothetical protein L104681 [... 54 4e-06
gi|126650155|ref|ZP_01722388.1| YnzC [Bacillus sp. B14905] ... 54 4e-06
gi|125624282|ref|YP_001032765.1| hypothetical protein llmg_... 53 5e-06
gi|89101004|ref|ZP_01173848.1| YnzC [Bacillus sp. NRRL B-14... 53 5e-06
gi|82465334|emb|CAJ43429.1| YnzC protein [Bacillus megaterium] 53 6e-06
gi|23099126|ref|NP_692592.1| hypothetical protein OB1671 [O... 53 7e-06
gi|16799572|ref|NP_469840.1| hypothetical protein lin0497 [... 52 9e-06
>gi|24378936|ref|NP_720891.1| hypothetical protein SMU.447 [Streptococcus mutans UA159]
gi|38605586|sp|Q8DVN2|Y447_STRMU UPF0291 protein SMU_447
gi|24376822|gb|AAN58197.1|AE014891_1 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 84
Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats.
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND
Sbjct: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPEDNS 84
ITPAKLKEIQRQKGIHGRKPEDNS
Sbjct: 61 ITPAKLKEIQRQKGIHGRKPEDNS 84
>gi|15675547|ref|NP_269721.1| hypothetical protein SPy_1687 [Streptococcus pyogenes M1 GAS]
gi|19746598|ref|NP_607734.1| hypothetical protein spyM18_1699 [Streptococcus pyogenes
MGAS8232]
gi|21911006|ref|NP_665274.1| hypothetical protein SpyM3_1470 [Streptococcus pyogenes MGAS315]
gi|28895308|ref|NP_801658.1| hypothetical protein SPs0396 [Streptococcus pyogenes SSI-1]
gi|50914777|ref|YP_060749.1| hypothetical protein M6_Spy1431 [Streptococcus pyogenes
MGAS10394]
gi|56807941|ref|ZP_00365760.1| COG4224: Uncharacterized protein conserved in bacteria
[Streptococcus pyogenes M49 591]
gi|71904088|ref|YP_280891.1| hypothetical protein M28_Spy1426 [Streptococcus pyogenes
MGAS6180]
gi|71911196|ref|YP_282746.1| hypothetical protein M5005_Spy_1383 [Streptococcus pyogenes
MGAS5005]
gi|94989011|ref|YP_597112.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
gi|94991011|ref|YP_599111.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
gi|94992903|ref|YP_601002.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
gi|94994890|ref|YP_602988.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
gi|139473281|ref|YP_001127996.1| hypothetical protein SpyM50407 [Streptococcus pyogenes str.
Manfredo]
gi|38605555|sp|P60080|Y1687_STRP1 UPF0291 protein SPy_1687/M5005_Spy1383
gi|38605556|sp|P60081|Y1470_STRP3 UPF0291 protein SpyM3_1470/SPs0396
gi|38605557|sp|P60082|Y1699_STRP8 UPF0291 protein spyM18_1699
gi|62287971|sp|Q5XAJ7|Y1431_STRP6 UPF0291 protein M6_Spy1431
gi|13622749|gb|AAK34442.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|19748815|gb|AAL98233.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21905214|gb|AAM80077.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810554|dbj|BAC63491.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50903851|gb|AAT87566.1| Hypothetical cytosolic protein [Streptococcus pyogenes MGAS10394]
gi|71803183|gb|AAX72536.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS6180]
gi|71853978|gb|AAZ52001.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS5005]
gi|94542519|gb|ABF32568.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS9429]
gi|94544519|gb|ABF34567.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10270]
gi|94546411|gb|ABF36458.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS2096]
gi|94548398|gb|ABF38444.1| hypothetical cytosolic protein [Streptococcus pyogenes MGAS10750]
gi|134271527|emb|CAM29750.1| conserved hypothetical protein [Streptococcus pyogenes str.
Manfredo]
Length = 85
Score = 93.2 bits (230), Expect = 4e-18, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKT GLTG EK+EQ +LREEYIEGYRRS+RHHIEG+K+VDEEGND
Sbjct: 1 MDPKKIARINELAKKKKTVGLTGPEKVEQAKLREEYIEGYRRSVRHHIEGIKLVDEEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|157076192|gb|ABV10875.1| conserved hypothetical protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 85
Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKTEGLT EK+EQ +LREEYIEGYRRS+RHHIEG+KIVDE+GND
Sbjct: 1 MDPKKIARINELAKKKKTEGLTAEEKVEQAKLREEYIEGYRRSVRHHIEGIKIVDEDGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|22536455|ref|NP_687306.1| hypothetical protein SAG0271 [Streptococcus agalactiae 2603V/R]
gi|25010335|ref|NP_734730.1| hypothetical protein gbs0261 [Streptococcus agalactiae NEM316]
gi|76787953|ref|YP_328995.1| hypothetical protein SAK_0343 [Streptococcus agalactiae A909]
gi|76798314|ref|ZP_00780560.1| Hypothetical UPF0291 protein [Streptococcus agalactiae 18RS21]
gi|77405006|ref|ZP_00782107.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77407267|ref|ZP_00784217.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77407411|ref|ZP_00784291.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77408190|ref|ZP_00784935.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77410573|ref|ZP_00786933.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|77414058|ref|ZP_00790228.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gi|38605587|sp|Q8E1T2|Y271_STRA5 UPF0291 protein SAG0271
gi|38605588|sp|Q8E796|Y261_STRA3 UPF0291 protein gbs0261
gi|22533284|gb|AAM99178.1|AE014203_25 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|23094687|emb|CAD45906.1| unknown [Streptococcus agalactiae NEM316]
gi|76563010|gb|ABA45594.1| conserved hypothetical protein [Streptococcus agalactiae A909]
gi|76586344|gb|EAO62856.1| Hypothetical UPF0291 protein [Streptococcus agalactiae 18RS21]
gi|77159900|gb|EAO71041.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gi|77163288|gb|EAO74239.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|77173205|gb|EAO76329.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77173981|gb|EAO76970.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77174124|gb|EAO77043.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77176445|gb|EAO79213.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 85
Score = 90.9 bits (224), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/82 (67%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINEL++KKKT GLTG EK+EQ +LREEYIEG+RRS+RHH+EG+K+VD+EGND
Sbjct: 1 MDPKKIARINELSKKKKTVGLTGEEKVEQAKLREEYIEGFRRSVRHHVEGIKLVDDEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|15901323|ref|NP_345927.1| hypothetical protein SP_1473 [Streptococcus pneumoniae TIGR4]
gi|15903370|ref|NP_358920.1| hypothetical protein spr1327 [Streptococcus pneumoniae R6]
gi|111658114|ref|ZP_01408813.1| hypothetical protein SpneT_02000722 [Streptococcus pneumoniae
TIGR4]
gi|116517108|ref|YP_816769.1| hypothetical protein SPD_1303 [Streptococcus pneumoniae D39]
gi|148984817|ref|ZP_01818070.1| hypothetical protein CGSSp3BS71_09281 [Streptococcus pneumoniae
SP3-BS71]
gi|148990282|ref|ZP_01821493.1| hypothetical protein CGSSp6BS73_03791 [Streptococcus pneumoniae
SP6-BS73]
gi|148992642|ref|ZP_01822310.1| hypothetical protein CGSSp9BS68_04540 [Streptococcus pneumoniae
SP9-BS68]
gi|148997466|ref|ZP_01825071.1| hypothetical protein CGSSp11BS70_01222 [Streptococcus pneumoniae
SP11-BS70]
gi|149002870|ref|ZP_01827796.1| hypothetical protein CGSSp14BS69_04018 [Streptococcus pneumoniae
SP14-BS69]
gi|149007255|ref|ZP_01830913.1| hypothetical protein CGSSp18BS74_00341 [Streptococcus pneumoniae
SP18-BS74]
gi|38605585|sp|Q8DP67|Y1327_STRR6 UPF0291 protein spr1327
gi|38605613|sp|Q97PW7|Y1473_STRPN UPF0291 protein SP_1473
gi|14972963|gb|AAK75567.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4]
gi|15458972|gb|AAL00131.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116077684|gb|ABJ55404.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gi|147756521|gb|EDK63562.1| hypothetical protein CGSSp11BS70_01222 [Streptococcus pneumoniae
SP11-BS70]
gi|147759164|gb|EDK66158.1| hypothetical protein CGSSp14BS69_04018 [Streptococcus pneumoniae
SP14-BS69]
gi|147761059|gb|EDK68027.1| hypothetical protein CGSSp18BS74_00341 [Streptococcus pneumoniae
SP18-BS74]
gi|147922839|gb|EDK73955.1| hypothetical protein CGSSp3BS71_09281 [Streptococcus pneumoniae
SP3-BS71]
gi|147924421|gb|EDK75511.1| hypothetical protein CGSSp6BS73_03791 [Streptococcus pneumoniae
SP6-BS73]
gi|147928659|gb|EDK79673.1| hypothetical protein CGSSp9BS68_04540 [Streptococcus pneumoniae
SP9-BS68]
Length = 85
Score = 90.1 bits (222), Expect = 3e-17, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKTEGLT EK+EQ +LREEYIEGYRR++RHHIEG+KIVDEEGND
Sbjct: 1 MDPKKIARINELAKKKKTEGLTPEEKVEQAKLREEYIEGYRRAVRHHIEGIKIVDEEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|149019422|ref|ZP_01834784.1| hypothetical protein CGSSp23BS72_05695 [Streptococcus pneumoniae
SP23-BS72]
gi|147931292|gb|EDK82271.1| hypothetical protein CGSSp23BS72_05695 [Streptococcus pneumoniae
SP23-BS72]
Length = 85
Score = 89.7 bits (221), Expect = 4e-17, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKTEGLT EK+EQ +LREEYIEGYRR++RHHIEG+KIVDEEGND
Sbjct: 1 MDPKKIARINELAKKKKTEGLTSEEKVEQAKLREEYIEGYRRAVRHHIEGIKIVDEEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|125718676|ref|YP_001035809.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
gi|125498593|gb|ABN45259.1| Conserved uncharacterized protein [Streptococcus sanguinis SK36]
Length = 85
Score = 89.7 bits (221), Expect = 5e-17, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKTEGLT EK+EQ +LREEYIEGYRRS+RHHIEG+KIVDE+GND
Sbjct: 1 MDPKKIARINELAKKKKTEGLTAEEKVEQAKLREEYIEGYRRSVRHHIEGIKIVDEDGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|149011705|ref|ZP_01832901.1| hypothetical protein CGSSp19BS75_07052 [Streptococcus pneumoniae
SP19-BS75]
gi|147764136|gb|EDK71068.1| hypothetical protein CGSSp19BS75_07052 [Streptococcus pneumoniae
SP19-BS75]
Length = 85
Score = 89.4 bits (220), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/82 (70%), Positives = 73/82 (89%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKTEGLT EK+EQ +LREEYIEGYRR++RHHIEG+KIVDE+GND
Sbjct: 1 MDPKKIARINELAKKKKTEGLTPEEKVEQAKLREEYIEGYRRAVRHHIEGIKIVDEKGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|55820589|ref|YP_139031.1| hypothetical protein stu0508 [Streptococcus thermophilus LMG
18311]
gi|55822479|ref|YP_140920.1| hypothetical protein str0508 [Streptococcus thermophilus
CNRZ1066]
gi|62287940|sp|Q5M0Y4|Y508_STRT1 UPF0291 protein str0508
gi|62287941|sp|Q5M5H1|Y508_STRT2 UPF0291 protein stu0508
gi|55736574|gb|AAV60216.1| conserved hypothetical protein [Streptococcus thermophilus LMG
18311]
gi|55738464|gb|AAV62105.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 85
Score = 88.6 bits (218), Expect = 9e-17, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 71/82 (86%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKKTEGLT E +EQ +LREEYI GYRR++RHHIEG+KIVDEEGND
Sbjct: 1 MDSKKIARINELAKKKKTEGLTPEEAVEQAKLREEYIAGYRRAVRHHIEGIKIVDEEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|116627394|ref|YP_820013.1| hypothetical protein STER_0541 [Streptococcus thermophilus LMD-9]
gi|116100671|gb|ABJ65817.1| Uncharacterized protein conserved in bacteria [Streptococcus
thermophilus LMD-9]
Length = 85
Score = 87.8 bits (216), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/82 (68%), Positives = 70/82 (85%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+ KI RINELA+KKK EGLT E +EQ +LREEYI GYRR++RHHIEG+KIVDEEGND
Sbjct: 1 MDSKKIARINELAKKKKIEGLTPEEAVEQAKLREEYIAGYRRAVRHHIEGIKIVDEEGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|81177282|ref|ZP_00876129.1| protein of unknown function DUF896 [Streptococcus suis 89/1591]
gi|146319417|ref|YP_001199129.1| hypothetical protein SSU05_1763 [Streptococcus suis 05ZYH33]
gi|146321621|ref|YP_001201332.1| hypothetical protein SSU98_1774 [Streptococcus suis 98HAH33]
gi|80976041|gb|EAP39703.1| protein of unknown function DUF896 [Streptococcus suis 89/1591]
gi|145690223|gb|ABP90729.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
05ZYH33]
gi|145692427|gb|ABP92932.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
98HAH33]
Length = 85
Score = 87.4 bits (215), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/82 (71%), Positives = 70/82 (85%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
MEQ KIDRINELARKKK EGLT E EQ LREEYIEGYRRS+R HIEG+K+VDE+GND
Sbjct: 1 MEQAKIDRINELARKKKAEGLTEEELQEQAALREEYIEGYRRSVRAHIEGIKVVDEDGND 60
Query: 61 ITPAKLKEIQRQKGIHGRKPED 82
+TP KL+++QR+KG+HGR +D
Sbjct: 61 VTPEKLRQVQREKGLHGRSLDD 82
>gi|29376143|ref|NP_815297.1| hypothetical protein EF1580 [Enterococcus faecalis V583]
gi|38605576|sp|Q834Q9|Y1580_ENTFA UPF0291 protein EF_1580
gi|29343606|gb|AAO81367.1| conserved hypothetical protein [Enterococcus faecalis V583]
Length = 80
Score = 70.1 bits (170), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/79 (59%), Positives = 63/79 (79%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + KI RINELA K K E L+ EK+EQ+ LR+EY+E +R +RHHIEG+K+VD+EG D
Sbjct: 2 LSKEKIARINELANKAKVEELSAKEKVEQQELRKEYLEAFRGGMRHHIEGMKVVDQEGTD 61
Query: 61 ITPAKLKEIQRQKGIHGRK 79
+TP KLK+IQR+KG+H RK
Sbjct: 62 VTPEKLKKIQREKGLHNRK 80
>gi|138894850|ref|YP_001125303.1| hypothetical protein GTNG_1186 [Geobacillus thermodenitrificans
NG80-2]
gi|134266363|gb|ABO66558.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 128
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 52/73 (71%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + K+ RINELA+K KT GL+ E +EQ +LR EYI+ +R+++ + +K++D GND
Sbjct: 54 LAKHKLARINELAKKAKTVGLSPEEVMEQAKLRREYIQAFRKAMTDMLHTVKVIDPNGND 113
Query: 61 ITPAKLKEIQRQK 73
+TP KLKE QR +
Sbjct: 114 VTPKKLKESQRHR 126
>gi|56419866|ref|YP_147184.1| hypothetical protein GK1331 [Geobacillus kaustophilus HTA426]
gi|62287966|sp|Q5L0C0|Y1331_GEOKA UPF0291 protein GK1331
gi|56379708|dbj|BAD75616.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 76
Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 51/73 (69%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + K+ RINELA+K KT GL+ E EQ +LR EYI+ +R+++ + + ++D GND
Sbjct: 2 LAKHKLARINELAKKAKTAGLSAEEAFEQAKLRREYIQAFRKAMTDMLHTVTVIDPSGND 61
Query: 61 ITPAKLKEIQRQK 73
+TP KLKE QR++
Sbjct: 62 VTPKKLKESQRRR 74
>gi|56963930|ref|YP_175661.1| hypothetical protein ABC2165 [Bacillus clausii KSM-K16]
gi|62287970|sp|Q5WG05|Y2165_BACSK UPF0291 protein ABC2165
gi|56910173|dbj|BAD64700.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 78
Score = 62.0 bits (149), Expect = 9e-09, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M + K+DRINEL++ KT GLT + +EQ+ LR EY+ +R S H+ +K+VD +GND
Sbjct: 1 MSKEKLDRINELSKLAKTVGLTKKQAMEQKALRNEYLSAFRSSFTDHLHTVKVVDAKGND 60
Query: 61 ITPAKLKEIQRQK 73
+TP KLK+ + QK
Sbjct: 61 VTPQKLKDSKAQK 73
>gi|81428885|ref|YP_395885.1| hypothetical protein LSA1274 [Lactobacillus sakei subsp. sakei
23K]
gi|78610527|emb|CAI55578.1| Hypothetical protein [Lactobacillus sakei subsp. sakei 23K]
Length = 80
Score = 60.8 bits (146), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 57/75 (76%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
M+Q ++DRINELA K K EGLT E +E++ LR+ Y++ +R S R +E L++ D+EG +
Sbjct: 3 MDQKRLDRINELAHKAKAEGLTPEETMERQELRDAYLKDFRSSFRSQVEMLQVYDKEGKE 62
Query: 61 ITPAKLKEIQRQKGI 75
+TP K+K+IQR+KG+
Sbjct: 63 VTPEKVKDIQREKGL 77
>gi|16803344|ref|NP_464829.1| hypothetical protein lmo1304 [Listeria monocytogenes EGD-e]
gi|47096929|ref|ZP_00234506.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|153174386|ref|ZP_01929914.1| hypothetical protein LMIG_01415 [Listeria monocytogenes FSL
N3-165]
gi|153179378|ref|ZP_01932597.1| hypothetical protein LMMG_00267 [Listeria monocytogenes F6900]
gi|153183667|ref|ZP_01934484.1| hypothetical protein LMOG_00354 [Listeria monocytogenes J0161]
gi|153190709|ref|ZP_01938072.1| hypothetical protein LMPG_00839 [Listeria monocytogenes J2818]
gi|153196083|ref|ZP_01940491.1| hypothetical protein LMRG_00754 [Listeria monocytogenes 10403S]
gi|38605605|sp|Q8Y7H5|Y1304_LISMO UPF0291 protein lmo1304
gi|16410720|emb|CAC99382.1| lmo1304 [Listeria monocytogenes]
gi|47014689|gb|EAL05645.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|126943319|gb|EBA21040.1| hypothetical protein LMOG_00354 [Listeria monocytogenes J0161]
gi|127634365|gb|EBA23751.1| hypothetical protein LMRG_00754 [Listeria monocytogenes 10403S]
gi|127765693|gb|EBA26038.1| hypothetical protein LMPG_00839 [Listeria monocytogenes J2818]
gi|133730334|gb|EBA32032.1| hypothetical protein LMIG_01415 [Listeria monocytogenes FSL
N3-165]
gi|133732863|gb|EBA34561.1| hypothetical protein LMMG_00267 [Listeria monocytogenes F6900]
Length = 75
Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 55/73 (75%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+E+ KIDRINEL++KKK LT AEK+EQ++LR+EYI+ +R ++ IE I+D G D
Sbjct: 2 LEKAKIDRINELSKKKKAGTLTSAEKVEQDKLRKEYIKSFRTHMKGTIENTTIIDPNGKD 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K++++ K
Sbjct: 62 VTPHKVKQLRKNK 74
>gi|46907531|ref|YP_013920.1| hypothetical protein LMOf2365_1322 [Listeria monocytogenes str.
4b F2365]
gi|153202146|ref|ZP_01943775.1| hypothetical protein LMSG_00629 [Listeria monocytogenes HPB2262]
gi|62287990|sp|Q720B7|Y1322_LISMF UPF0291 protein LMOf2365_1322
gi|46880799|gb|AAT04097.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
F2365]
gi|133735429|gb|EBA37127.1| hypothetical protein LMSG_00629 [Listeria monocytogenes HPB2262]
Length = 75
Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+E+ KIDRINEL++KKK LT EK+EQ++LR+EYI+ +R ++ IE I+D G D
Sbjct: 2 LEKAKIDRINELSKKKKAGTLTATEKVEQDKLRKEYIKSFRTHMKGTIENTTIIDPNGTD 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K++++ K
Sbjct: 62 VTPHKVKQLRKNK 74
>gi|116872735|ref|YP_849516.1| hypothetical protein lwe1319 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741613|emb|CAK20737.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 75
Score = 58.9 bits (141), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 56/73 (76%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+E+ KIDRINEL++KKK LT EK+EQE+LR+EYI+ +R ++ IE I+D +GND
Sbjct: 2 LEKAKIDRINELSKKKKAGTLTSNEKIEQEKLRKEYIKSFRTHMKGTIENTTIIDPKGND 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K++++ K
Sbjct: 62 VTPHKIKQMRKNK 74
>gi|16078851|ref|NP_389671.1| hypothetical protein BSU17880 [Bacillus subtilis subsp. subtilis
str. 168]
gi|38605543|sp|O31818|YNZC_BACSU UPF0291 protein ynzC
gi|2634172|emb|CAB13672.1| ynzC [Bacillus subtilis subsp. subtilis str. 168]
Length = 77
Score = 58.5 bits (140), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 54/76 (71%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ KI RINELA K K +T EK EQ++LR+EY++G+R S+++ ++ +KI+D EGND
Sbjct: 2 ISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGND 61
Query: 61 ITPAKLKEIQRQKGIH 76
+TP KLK QR +H
Sbjct: 62 VTPEKLKREQRNNKLH 77
>gi|70726567|ref|YP_253481.1| hypothetical protein SH1566 [Staphylococcus haemolyticus
JCSC1435]
gi|68447291|dbj|BAE04875.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 77
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 2 EQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDI 61
+ IDRINELA+KKK +GLT AE EQ +LR++Y+E +R+ + IE K++D EGND+
Sbjct: 4 DNLNIDRINELAKKKKEQGLTEAEAKEQSKLRKKYLEAFRKGFKQQIESTKVIDPEGNDV 63
Query: 62 TPAKLKEIQRQ 72
TP KLK+IQ Q
Sbjct: 64 TPEKLKKIQEQ 74
>gi|16800410|ref|NP_470678.1| hypothetical protein lin1342 [Listeria innocua Clip11262]
gi|38605608|sp|Q92C49|Y1342_LISIN UPF0291 protein lin1342
gi|16413815|emb|CAC96573.1| lin1342 [Listeria innocua]
Length = 75
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 56/73 (76%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+E+ KIDRINEL++KKK LT EK+EQE+LR+EYI+ +R ++ IE I+D +GND
Sbjct: 2 LEKAKIDRINELSKKKKAGTLTADEKVEQEKLRKEYIKSFRTHMKGTIENTTIIDPKGND 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K++++ K
Sbjct: 62 VTPHKIKQMRKNK 74
>gi|47094163|ref|ZP_00231882.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47017468|gb|EAL08282.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
Length = 75
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 53/73 (72%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+E+ KIDRINEL++KKK LT EK+EQ+ LR+EYI+ +R ++ IE I+D G D
Sbjct: 2 LEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIENTTIIDPNGKD 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K++++ K
Sbjct: 62 VTPHKVKQLRKNK 74
>gi|153166681|ref|ZP_01927204.1| hypothetical protein LMHG_01483 [Listeria monocytogenes FSL
N1-017]
gi|133727441|gb|EBA29139.1| hypothetical protein LMHG_01483 [Listeria monocytogenes FSL
N1-017]
Length = 75
Score = 58.2 bits (139), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 54/73 (73%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+E+ KIDRINEL++KKK LT EK+EQ++LR+EYI+ +R ++ IE I+D G D
Sbjct: 2 LEKAKIDRINELSKKKKAGTLTATEKVEQDKLRKEYIKSFRTHMKGTIENTTIIDPNGKD 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K++++ K
Sbjct: 62 VTPHKVKQLRKNK 74
>gi|68056500|ref|ZP_00540617.1| protein of unknown function DUF896 [Exiguobacterium sibiricum
255-15]
gi|68006909|gb|EAM86205.1| protein of unknown function DUF896 [Exiguobacterium sibiricum
255-15]
Length = 78
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ Q ++DRINELA K K E LT AE EQ+ LR Y+E +R S ++ + G+KIVDEEG D
Sbjct: 2 LSQEQLDRINELANKSKVEPLTDAETAEQKELRTAYLEAFRGSFKNQMMGIKIVDEEGTD 61
Query: 61 ITPAKLKEIQRQK 73
+TP KLK+ Q ++
Sbjct: 62 VTPEKLKQAQEEE 74
>gi|89208871|ref|ZP_01187352.1| Protein of unknown function DUF896, bacterial [Bacillus
weihenstephanensis KBAB4]
gi|89153186|gb|EAR73274.1| Protein of unknown function DUF896, bacterial [Bacillus
weihenstephanensis KBAB4]
Length = 79
Score = 57.8 bits (138), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 57/70 (81%)
Query: 3 QTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDIT 62
Q I+RIN LA+K K EGLT E+ E++ LRE+Y++G+R+++ + ++G+K+V+EEG D+T
Sbjct: 4 QELIERINFLAKKAKAEGLTEEEQRERQSLREQYLKGFRQNMLNELKGIKVVNEEGTDVT 63
Query: 63 PAKLKEIQRQ 72
PAKLK +++Q
Sbjct: 64 PAKLKALKKQ 73
>gi|149183288|ref|ZP_01861730.1| hypothetical protein BSG1_17100 [Bacillus sp. SG-1]
gi|148849015|gb|EDL63223.1| hypothetical protein BSG1_17100 [Bacillus sp. SG-1]
Length = 83
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 54/76 (71%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + K+ RIN LA+K K +GLT E EQ +LR+EY+E +R S+R IE ++ D EGN+
Sbjct: 8 LSKDKMARINTLAKKAKAKGLTPDEAKEQSKLRKEYLETFRNSMRSTIENTRMFDPEGNE 67
Query: 61 ITPAKLKEIQRQKGIH 76
+TP K++EIQ+ K +H
Sbjct: 68 VTPEKIREIQKNKKLH 83
>gi|30263635|ref|NP_846012.1| hypothetical protein BA3752 [Bacillus anthracis str. Ames]
gi|42782775|ref|NP_980022.1| hypothetical protein BCE_3725 [Bacillus cereus ATCC 10987]
gi|47529042|ref|YP_020391.1| hypothetical protein GBAA3752 [Bacillus anthracis str. 'Ames
Ancestor']
gi|47569213|ref|ZP_00239899.1| hypothetical protein cytosolic protein-related protein [Bacillus
cereus G9241]
gi|49186481|ref|YP_029733.1| hypothetical protein BAS3478 [Bacillus anthracis str. Sterne]
gi|49479436|ref|YP_037764.1| hypothetical protein BT9727_3443 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52141851|ref|YP_084978.1| hypothetical protein BCZK3394 [Bacillus cereus E33L]
gi|65320960|ref|ZP_00393919.1| COG4224: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|118478922|ref|YP_896073.1| hypothetical protein BALH_3326 [Bacillus thuringiensis str. Al
Hakam]
gi|38605575|sp|Q81Y08|Y3752_BACAN UPF0291 protein BA_3752/GBAA3752/BAS3478
gi|47606078|sp|P61462|Y3725_BACC1 UPF0291 protein BCE_3725
gi|62287972|sp|Q637D9|Y3394_BACCZ UPF0291 protein BCE33L3394
gi|62287984|sp|Q6HFB2|Y3443_BACHK UPF0291 protein BT9727_3443
gi|30258270|gb|AAP27498.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
gi|42738702|gb|AAS42630.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|47504190|gb|AAT32866.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|47554087|gb|EAL12452.1| hypothetical protein cytosolic protein-related protein [Bacillus
cereus G9241]
gi|49180408|gb|AAT55784.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|49330992|gb|AAT61638.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51975320|gb|AAU16870.1| conserved hypothetical protein [Bacillus cereus E33L]
gi|118418147|gb|ABK86566.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
Hakam]
Length = 79
Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 56/67 (83%)
Query: 6 IDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDITPAK 65
++RIN LA+K K EGLT E+ E++ LRE+Y++G+R+++ + ++G+K+V+E+G D+TPAK
Sbjct: 7 VERINFLAKKAKAEGLTEEEQRERQSLREQYLKGFRQNMLNELKGIKVVNEQGTDVTPAK 66
Query: 66 LKEIQRQ 72
LK +++Q
Sbjct: 67 LKALKKQ 73
>gi|90961517|ref|YP_535433.1| hypothetical protein LSL_0541 [Lactobacillus salivarius subsp.
salivarius UCC118]
gi|90820711|gb|ABD99350.1| Conserved hypothetical protein [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 84
Score = 57.0 bits (136), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 3 QTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDIT 62
Q IDRINEL++KKK EGLT E EQ+ LRE Y+ +R + R HIE L++ D+ G ++T
Sbjct: 9 QELIDRINELSKKKKEEGLTSEELAEQKELRETYLSLFRENFRSHIEMLQVYDKNGKEVT 68
Query: 63 PAKLKEIQRQKGI 75
P K+K+IQR++G+
Sbjct: 69 PEKVKKIQRERGL 81
>gi|154686201|ref|YP_001421362.1| YnzC [Bacillus amyloliquefaciens FZB42]
gi|154352052|gb|ABS74131.1| YnzC [Bacillus amyloliquefaciens FZB42]
Length = 77
Score = 56.6 bits (135), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 58/76 (76%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + KI RINELA+K K+ +T EK EQ++LR+EY++G+R S+++ ++ +K++D EGND
Sbjct: 2 ISKEKIARINELAQKAKSNTITDEEKAEQQKLRQEYLKGFRSSMKNTLKSVKVIDPEGND 61
Query: 61 ITPAKLKEIQRQKGIH 76
+TP KLK Q++ +H
Sbjct: 62 VTPEKLKREQQKNNLH 77
>gi|30021785|ref|NP_833416.1| hypothetical protein BC3688 [Bacillus cereus ATCC 14579]
gi|38605572|sp|Q812Y7|Y3688_BACCR UPF0291 protein BC_3688
gi|29897341|gb|AAP10617.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579]
Length = 79
Score = 56.2 bits (134), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 55/67 (82%)
Query: 6 IDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDITPAK 65
++RIN LA+K K EGLT E+ E++ LRE+Y++G+R+++ + ++G+K+V+EEG D+TP K
Sbjct: 7 VERINFLAKKAKAEGLTEEEQRERQSLREQYLKGFRQNMLNELKGIKVVNEEGTDVTPTK 66
Query: 66 LKEIQRQ 72
LK +++Q
Sbjct: 67 LKALKKQ 73
>gi|52080410|ref|YP_079201.1| conserved protein YnzC [Bacillus licheniformis ATCC 14580]
gi|52785789|ref|YP_091618.1| YnzC [Bacillus licheniformis ATCC 14580]
gi|62287975|sp|Q65J39|Y2933_BACLD UPF0291 protein BLi02035/BL02933
gi|52003621|gb|AAU23563.1| conserved protein YnzC [Bacillus licheniformis ATCC 14580]
gi|52348291|gb|AAU40925.1| YnzC [Bacillus licheniformis DSM 13]
Length = 77
Score = 55.8 bits (133), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 57/76 (75%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + KI RINELA+K K+ LT EK EQ++LR+EY++G R S+++ ++ + IVD EGND
Sbjct: 2 ISKEKIARINELAKKAKSGSLTDEEKAEQQKLRQEYLQGVRASMKNTLKTVTIVDPEGND 61
Query: 61 ITPAKLKEIQRQKGIH 76
+TP KLK+ +R + +H
Sbjct: 62 VTPEKLKQEKRNRRLH 77
>gi|114794349|pdb|2HEP|A Chain A, Solution Nmr Structure Of The Upf0291 Protein Ynzc From
Bacillus Subtilis. Northeast Structural Genomics Target
Sr384
Length = 85
Score = 55.8 bits (133), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 52/71 (73%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ KI RINELA K K +T EK EQ++LR+EY++G+R S+++ ++ +KI+D EGND
Sbjct: 2 ISNAKIARINELAAKAKAGVITEEEKAEQQKLRQEYLKGFRSSMKNTLKSVKIIDPEGND 61
Query: 61 ITPAKLKEIQR 71
+TP KLK QR
Sbjct: 62 VTPEKLKREQR 72
>gi|15614916|ref|NP_243219.1| hypothetical protein BH2353 [Bacillus halodurans C-125]
gi|38605618|sp|Q9KAD6|Y2353_BACHD UPF0291 protein BH2353
gi|10174973|dbj|BAB06072.1| BH2353 [Bacillus halodurans C-125]
Length = 79
Score = 55.5 bits (132), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 51/68 (75%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + KI+RINELA++ KT GLT E EQ++LREEYI+ +R+S ++ + + +VD GND
Sbjct: 2 LSKQKIERINELAKRAKTTGLTEDELREQKKLREEYIQQFRQSFKNQLHSVTVVDGAGND 61
Query: 61 ITPAKLKE 68
+TP KLK+
Sbjct: 62 VTPDKLKQ 69
>gi|116333963|ref|YP_795490.1| hypothetical protein LVIS_1359 [Lactobacillus brevis ATCC 367]
gi|116099310|gb|ABJ64459.1| hypothetical protein LVIS_1359 [Lactobacillus brevis ATCC 367]
Length = 82
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 8 RINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDITPAKLK 67
RINELA K KT+GLT E E++ LR++Y++ +R S R +E +++ D+ G ++TP K++
Sbjct: 12 RINELAHKNKTDGLTDEETAERDHLRKQYLKLFRESFRSQVEMMQVYDKAGKEVTPEKVR 71
Query: 68 EIQRQKGI 75
+IQR KG+
Sbjct: 72 QIQRDKGL 79
>gi|15924331|ref|NP_371865.1| hypothetical protein SAV1341 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926922|ref|NP_374455.1| hypothetical protein SA1176 [Staphylococcus aureus subsp. aureus
N315]
gi|21282957|ref|NP_646045.1| hypothetical protein MW1228 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483533|ref|YP_040757.1| hypothetical protein SAR1351 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49486185|ref|YP_043406.1| hypothetical protein SAS1281 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650345|ref|YP_186229.1| hypothetical protein SACOL1376 [Staphylococcus aureus subsp.
aureus COL]
gi|82750935|ref|YP_416676.1| hypothetical protein SAB1199 [Staphylococcus aureus RF122]
gi|87160891|ref|YP_493935.1| hypothetical protein SAUSA300_1238 [Staphylococcus aureus subsp.
aureus USA300]
gi|88195065|ref|YP_499865.1| hypothetical protein SAOUHSC_01336 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267829|ref|YP_001246772.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH9]
gi|150393891|ref|YP_001316566.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH1]
gi|151221465|ref|YP_001332287.1| hypothetical protein NWMN_1253 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979661|ref|YP_001441920.1| hypothetical protein SAHV_1330 [Staphylococcus aureus subsp.
aureus Mu3]
gi|38605549|sp|P60074|Y1341_STAAM UPF0291 protein SAV1341
gi|38605551|sp|P60076|Y1176_STAAN UPF0291 protein SA1176
gi|38605553|sp|P60078|Y1228_STAAW UPF0291 protein MW1228
gi|56749715|sp|Q6G9L7|Y1281_STAAS UPF0291 protein SAS1281
gi|56749744|sp|Q6GH65|Y1351_STAAR UPF0291 protein SAR1351
gi|62287961|sp|Q5HG78|Y1376_STAAC UPF0291 protein SACOL1376
gi|13701139|dbj|BAB42434.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus N315]
gi|14247112|dbj|BAB57503.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204396|dbj|BAB95093.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49241662|emb|CAG40350.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49244628|emb|CAG43059.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57284531|gb|AAW36625.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus COL]
gi|82656466|emb|CAI80888.1| conserved hypothetical protein [Staphylococcus aureus RF122]
gi|87126865|gb|ABD21379.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202623|gb|ABD30433.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147740898|gb|ABQ49196.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH9]
gi|149946343|gb|ABR52279.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH1]
gi|150374265|dbj|BAF67525.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156721796|dbj|BAF78213.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu3]
Length = 79
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 6 IDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDITPAK 65
I+RINELA+KKK GLT E EQ LR+ Y+E +R+ + IE K++D EGND+TP K
Sbjct: 8 IERINELAKKKKEVGLTQEEAKEQTALRKAYLESFRKGFKQQIENTKVIDPEGNDVTPEK 67
Query: 66 LKEIQRQK 73
+KEIQ+++
Sbjct: 68 IKEIQQKR 75
>gi|27467942|ref|NP_764579.1| hypothetical protein SE1024 [Staphylococcus epidermidis ATCC
12228]
gi|57866832|ref|YP_188490.1| hypothetical protein SERP0911 [Staphylococcus epidermidis RP62A]
gi|38605584|sp|Q8CSP4|Y1024_STAES UPF0291 protein SE_1024
gi|62287938|sp|Q5HPK0|Y911_STAEQ UPF0291 protein SERP0911
gi|27315487|gb|AAO04621.1|AE016747_118 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637490|gb|AAW54278.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
Length = 78
Score = 54.3 bits (129), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/72 (55%), Positives = 51/72 (70%)
Query: 2 EQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDI 61
E IDRINELARKKK GLT E EQ +LR +Y+E +R+ + IE K++D EGND+
Sbjct: 4 ENLNIDRINELARKKKEHGLTNEEAKEQTKLRRQYLEEFRKGFKQQIENTKVIDPEGNDV 63
Query: 62 TPAKLKEIQRQK 73
TP KLK+IQ +K
Sbjct: 64 TPEKLKKIQEEK 75
>gi|15925563|ref|NP_373097.1| hypothetical protein SAV2573 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15928152|ref|NP_375685.1| hypothetical protein SA2360 [Staphylococcus aureus subsp. aureus
N315]
gi|21284223|ref|NP_647311.1| hypothetical protein MW2494 [Staphylococcus aureus subsp. aureus
MW2]
gi|49484772|ref|YP_041996.1| hypothetical protein SAR2654 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49487353|ref|YP_044574.1| hypothetical protein SAS2460 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57652310|ref|YP_187380.1| hypothetical protein SACOL2589 [Staphylococcus aureus subsp.
aureus COL]
gi|82752155|ref|YP_417896.1| hypothetical protein SAB2447 [Staphylococcus aureus RF122]
gi|87162422|ref|YP_495145.1| hypothetical protein SAUSA300_2511 [Staphylococcus aureus subsp.
aureus USA300]
gi|88196521|ref|YP_501346.1| hypothetical protein SAOUHSC_02893 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148269005|ref|YP_001247948.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH9]
gi|150395084|ref|YP_001317759.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH1]
gi|151222685|ref|YP_001333507.1| hypothetical protein NWMN_2473 [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156980888|ref|YP_001443147.1| hypothetical protein SAHV_2557 [Staphylococcus aureus subsp.
aureus Mu3]
gi|38605550|sp|P60075|Y2573_STAAM UPF0291 protein SAV2573
gi|38605552|sp|P60077|Y2360_STAAN UPF0291 protein SA2360
gi|38605554|sp|P60079|Y2494_STAAW UPF0291 protein MW2494
gi|56749697|sp|Q6G6A0|Y2460_STAAS UPF0291 protein SAS2460
gi|56749726|sp|Q6GDM7|Y2654_STAAR UPF0291 protein SAR2654
gi|62287958|sp|Q5HCX7|Y2589_STAAC UPF0291 protein SACOL2589
gi|13702523|dbj|BAB43664.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus N315]
gi|14248347|dbj|BAB58735.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
gi|21205666|dbj|BAB96359.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MW2]
gi|49242901|emb|CAG41631.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49245796|emb|CAG44276.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|57286496|gb|AAW38590.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus COL]
gi|82657686|emb|CAI82135.1| conserved hypothetical protein [Staphylococcus aureus RF122]
gi|87128396|gb|ABD22910.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87204079|gb|ABD31889.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|147742074|gb|ABQ50372.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH9]
gi|149947536|gb|ABR53472.1| protein of unknown function DUF896 [Staphylococcus aureus subsp.
aureus JH1]
gi|150375485|dbj|BAF68745.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156723023|dbj|BAF79440.1| conserved hypothetical protein [Staphylococcus aureus subsp.
aureus Mu3]
Length = 76
Score = 53.9 bits (128), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 6 IDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDITPAK 65
+DRINELA K+K + LT AEK EQ LR++Y+ R + +K+VD G D+TP K
Sbjct: 4 LDRINELANKEKVQPLTVAEKQEQHALRQDYLSMIRGQVLTTFSTIKVVDPIGQDVTPDK 63
Query: 66 LKEIQRQKG 74
+ ++++Q G
Sbjct: 64 VYDLRQQYG 72
>gi|116511936|ref|YP_809152.1| hypothetical protein LACR_1198 [Lactococcus lactis subsp.
cremoris SK11]
gi|116107590|gb|ABJ72730.1| hypothetical protein LACR_1198 [Lactococcus lactis subsp.
cremoris SK11]
Length = 80
Score = 53.5 bits (127), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 5 KIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEE-GNDITP 63
+++RINELARKKK EGL+ AE EQ LR Y++ + + R +E +K++DE+ G D+TP
Sbjct: 7 QVERINELARKKKAEGLSEAELEEQAFLRRAYLDSVKANFRSQVETIKVIDEKTGEDVTP 66
Query: 64 AKLKEIQRQKGI 75
KLKEIQR+ G+
Sbjct: 67 DKLKEIQRKNGM 78
>gi|15673079|ref|NP_267253.1| hypothetical protein L104681 [Lactococcus lactis subsp. lactis
Il1403]
gi|38605615|sp|Q9CGJ9|YLAC_LACLA UPF0291 protein ylaC
gi|12724054|gb|AAK05195.1|AE006342_1 HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis Il1403]
Length = 80
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 5 KIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEE-GNDITP 63
+++RINELARKKK EGL+ AE EQ LR Y++ + + R +E +K++DE+ G D+TP
Sbjct: 7 QVERINELARKKKAEGLSEAELEEQALLRRAYLDSVKANFRSQVETIKVIDEKTGEDVTP 66
Query: 64 AKLKEIQRQKGI 75
KLKEIQR+ G+
Sbjct: 67 DKLKEIQRKNGM 78
>gi|126650155|ref|ZP_01722388.1| YnzC [Bacillus sp. B14905]
gi|126593327|gb|EAZ87289.1| YnzC [Bacillus sp. B14905]
Length = 77
Score = 53.5 bits (127), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 52/73 (71%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + KI+RINEL+ K K+ LT E E+ LR+EY++ +R ++R IE +K+VD EGND
Sbjct: 2 LSKEKINRINELSAKAKSGQLTDEEAKERTALRKEYLDTFRATMRDTIENVKVVDAEGND 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+++ ++ K
Sbjct: 62 VTPEKVRQAKKNK 74
>gi|125624282|ref|YP_001032765.1| hypothetical protein llmg_1475 [Lactococcus lactis subsp.
cremoris MG1363]
gi|124493090|emb|CAL98054.1| conserved hypothetical protein [Lactococcus lactis subsp.
cremoris MG1363]
Length = 80
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 5 KIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEE-GNDITP 63
+++RINELARKKK EGL+ AE EQ LR Y++ + + R +E +K++DE+ G D+TP
Sbjct: 7 QVERINELARKKKAEGLSEAELEEQALLRRAYLDSVKANFRSQVETIKVIDEKTGEDVTP 66
Query: 64 AKLKEIQRQKGI 75
KLKEIQR+ G+
Sbjct: 67 DKLKEIQRKNGM 78
>gi|89101004|ref|ZP_01173848.1| YnzC [Bacillus sp. NRRL B-14911]
gi|89084300|gb|EAR63457.1| YnzC [Bacillus sp. NRRL B-14911]
Length = 79
Score = 53.1 bits (126), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 51/73 (69%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + K+ RINELA K KT GLT E EQ +LR EY++ +R ++ ++G+ I+D +GND
Sbjct: 2 LPKDKMARINELANKAKTAGLTNEEAKEQTKLRSEYLQTFRSNMLTTLKGVTIMDPKGND 61
Query: 61 ITPAKLKEIQRQK 73
+TP K+K+++ +
Sbjct: 62 VTPKKIKKLREDE 74
>gi|82465334|emb|CAJ43429.1| YnzC protein [Bacillus megaterium]
Length = 76
Score = 52.8 bits (125), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 48/63 (76%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + K+ RIN L++K K EGLT +E EQ+ LR+EY++ +R+S+ +H+ +K+VDEEG D
Sbjct: 2 LSKDKLARINALSKKAKAEGLTESEAKEQQELRQEYLKVFRQSMTNHLHTIKVVDEEGKD 61
Query: 61 ITP 63
+TP
Sbjct: 62 VTP 64
>gi|23099126|ref|NP_692592.1| hypothetical protein OB1671 [Oceanobacillus iheyensis HTE831]
gi|38605589|sp|Q8EQM4|Y1671_OCEIH UPF0291 protein OB1671
gi|22777354|dbj|BAC13627.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 77
Score = 52.8 bits (125), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 52/76 (68%)
Query: 1 MEQTKIDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGND 60
+ + K+DRIN L++K K EGLT EK EQ++LREEY++ R S ++ + + ++D EG D
Sbjct: 2 LSKDKLDRINVLSKKSKEEGLTTEEKAEQKKLREEYLKNVRSSFKNQLSTVTVLDPEGKD 61
Query: 61 ITPAKLKEIQRQKGIH 76
+TP KL++ Q + H
Sbjct: 62 VTPQKLRDYQDRNKKH 77
>gi|16799572|ref|NP_469840.1| hypothetical protein lin0497 [Listeria innocua Clip11262]
gi|16802539|ref|NP_464024.1| hypothetical protein lmo0496 [Listeria monocytogenes EGD-e]
gi|46906742|ref|YP_013131.1| hypothetical protein LMOf2365_0526 [Listeria monocytogenes str.
4b F2365]
gi|47093121|ref|ZP_00230897.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47094722|ref|ZP_00232337.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|116871885|ref|YP_848666.1| hypothetical protein lwe0465 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|153173349|ref|ZP_01929129.1| hypothetical protein LMIG_02667 [Listeria monocytogenes FSL
N3-165]
gi|153186317|ref|ZP_01936658.1| hypothetical protein LMOG_02619 [Listeria monocytogenes J0161]
gi|153189857|ref|ZP_01937332.1| hypothetical protein LMPG_02806 [Listeria monocytogenes J2818]
gi|153195130|ref|ZP_01939928.1| hypothetical protein LMRG_00177 [Listeria monocytogenes 10403S]
gi|38605547|sp|P60072|Y497_LISIN UPF0291 protein lin0497
gi|38605548|sp|P60073|Y496_LISMO UPF0291 protein lmo0496
gi|62287948|sp|Q723F3|Y526_LISMF UPF0291 protein LMOf2365_0526
gi|16409872|emb|CAC98575.1| lmo0496 [Listeria monocytogenes]
gi|16412937|emb|CAC95729.1| lin0497 [Listeria innocua]
gi|46880007|gb|AAT03308.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
F2365]
gi|47016862|gb|EAL07780.1| conserved hypothetical protein [Listeria monocytogenes str. 1/2a
F6854]
gi|47018494|gb|EAL09251.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|116740763|emb|CAK19883.1| unnamed protein product [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|126941199|gb|EBA19092.1| hypothetical protein LMOG_02619 [Listeria monocytogenes J0161]
gi|127634733|gb|EBA24113.1| hypothetical protein LMRG_00177 [Listeria monocytogenes 10403S]
gi|127766505|gb|EBA26842.1| hypothetical protein LMPG_02806 [Listeria monocytogenes J2818]
gi|133731057|gb|EBA32755.1| hypothetical protein LMIG_02667 [Listeria monocytogenes FSL
N3-165]
Length = 74
Score = 52.0 bits (123), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 6 IDRINELARKKKTEGLTGAEKLEQERLREEYIEGYRRSIRHHIEGLKIVDEEGNDITPAK 65
+ INELA K+K+EGLT EK Q LR+EY++ R +++ ++ + I+D G+D+TP K
Sbjct: 5 LKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDVTPKK 64
Query: 66 LKEIQRQ 72
LKEIQ +
Sbjct: 65 LKEIQAE 71
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.310 0.133 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 306,996,337
Number of Sequences: 5470121
Number of extensions: 11515728
Number of successful extensions: 38980
Number of sequences better than 1.0e-05: 82
Number of HSP's better than 0.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 38895
Number of HSP's gapped (non-prelim): 82
length of query: 84
length of database: 1,894,087,724
effective HSP length: 55
effective length of query: 29
effective length of database: 1,593,231,069
effective search space: 46203701001
effective search space used: 46203701001
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 124 (52.4 bits)