TP0163
8 hits
308 letters
ath 
72 _ At1g02920 (209) KOG0867
hsa 
67 _ HsM4759152 (368) KOG1562
hsa 67 _ Hs21264341 (366) KOG1562
hsa 67 _ Hs20373171 (524) KOG3814
cel 
65 _ CE27598 (840) KOG0504
ath 65 At5g10860 (206)
ath 65 _ At1g02930 (208) KOG0867
dme 
65 _ 7291239 (562) KOG0993
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= TP0163
(308 letters)
Database: kyva
112,920 sequences; 47,500,486 total letters
Score E
Sequences producing significant alignments: (bits) Value
At1g02920 32 1.3
HsM4759152 30 4.9
Hs21264341 30 4.9
Hs20373171 30 4.9
CE27598 30 8.3
At5g10860 30 8.3
At1g02930 30 8.3
7291239 30 8.3
# >At1g02920
# Length = 209
#
# Score = 32.3 bits (72), Expect = 1.3
# Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
#
# Query: 66 DPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRLVVAVSETIP-VSQRLS 124
# +P ++ G V + D L+ + + +S +G++LV S+ I ++ +
# Sbjct: 44 EPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSD-KGNQLVSLGSKDIAGIAMGIE 102
#
# Query: 125 LEEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRK 184
# +E EFDP K V+E + K L G T + T + + LD Y R
# Sbjct: 103 IESHEFDP----------VGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRL 152
#
# Query: 185 AQS--LPAERRVLVTAH 199
# +S L +++ LV H
# Sbjct: 153 GESKYLASDKFTLVDLH 169
#
#
# >HsM4759152
# Length = 368
#
# Score = 30.4 bits (67), Expect = 4.9
# Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 28/107 (26%)
#
# Query: 49 NIAQGDV-HLKGLMGPGVDPHLYTATAGDVEWLGNADL-ILYNGLHLETKM--------- 97
# N+A+ D+ + + +MG G + + T DV LG D IL + L+ KM
# Sbjct: 171 NLAESDLAYTRAIMGSGKEDY----TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQM 226
#
# Query: 98 -------------GEVFSKLRGSRLVVAVSETIPVSQRLSLEEAEFD 131
# G+V L+G V + + IPV +R + E EFD
# Sbjct: 227 VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFD 273
#
#
# >Hs21264341
# Length = 366
#
# Score = 30.4 bits (67), Expect = 4.9
# Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 28/107 (26%)
#
# Query: 49 NIAQGDV-HLKGLMGPGVDPHLYTATAGDVEWLGNADL-ILYNGLHLETKM--------- 97
# N+A+ D+ + + +MG G + + T DV LG D IL + L+ KM
# Sbjct: 169 NLAESDLAYTRAIMGSGKEDY----TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQM 224
#
# Query: 98 -------------GEVFSKLRGSRLVVAVSETIPVSQRLSLEEAEFD 131
# G+V L+G V + + IPV +R + E EFD
# Sbjct: 225 VIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFD 271
#
#
# >Hs20373171
# Length = 524
#
# Score = 30.4 bits (67), Expect = 4.9
# Identities = 23/69 (33%), Positives = 34/69 (48%), Gaps = 3/69 (4%)
#
# Query: 88 YNGLHLETKMGEVFSKLRGSRLVVAVSETIPVSQRLSLEEAEFDPHVWFDVKLWSYSVKA 147
# +N L+ E E K R +RLVVAV E QRL EE + P D + + +A
# Sbjct: 340 HNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPR---EAAQA 396
#
# Query: 148 VYESLCKLL 156
# ++ S+ + L
# Sbjct: 397 IFPSMARAL 405
#
#
# >CE27598
# Length = 840
#
# Score = 29.6 bits (65), Expect = 8.3
# Identities = 47/200 (23%), Positives = 84/200 (41%), Gaps = 23/200 (11%)
#
# Query: 77 VEWL-----GNADLILYNG---LHLETKMGEVFSKLRGSRLVVAVSETIPVSQRLSLEEA 128
# VEWL D+ +NG +HL +G + +++ ++ V S E+
# Sbjct: 326 VEWLLAVDESVLDIPNHNGRTAIHLAASVGNL------EMVILLCTKKCFVDPLCSREKE 379
#
# Query: 129 EFDPHVWFDVKLWSYSVKAVYESLCKLLPGKT-REFTQRY-QAYQQQLDKLDAYVRRKAQ 186
# F P D+ V V E L KL K+ +EF+ Y + ++ + + A RRK
# Sbjct: 380 IFTP---LDLATKQNHV-VVVEYLTKLCRAKSSKEFSPEYIENWKTNFEAMVAEARRKRN 435
#
# Query: 187 SLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEA--SAHDMQELAAFIAQRKLPA 244
# L AE++ + G E+ + GV+T+ + SA + +
# Sbjct: 436 ELKAEQKKQRRPSTSDGIVETERKKEIADV-GVNTSQRSIKSADSNAPKRKYSKSTSVTN 494
#
# Query: 245 IFIESSIPHKNVEALRDAVQ 264
# + SIP K +EAL+++++
# Sbjct: 495 LTEIPSIPKKELEALKESIE 514
#
#
# >At5g10860
# Length = 206
#
# Score = 29.6 bits (65), Expect = 8.3
# Identities = 28/101 (27%), Positives = 47/101 (45%), Gaps = 7/101 (6%)
#
# Query: 17 TGFTHAFGSKDAAADGKPLVVTTIGMIADAVKNIAQGDVHLKGLMGPGVDPHLYTATAGD 76
# T + SK +ADG L TT + DAVK++ Q +V ++ PG A AG
# Sbjct: 55 TTISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ----QALAGI 110
#
# Query: 77 VEWLGNADLILYNGLHLE-TKMGEVFSKLRGSRLVVAVSET 116
# + I+ G + TK+G++ ++ ++L+ ET
# Sbjct: 111 ITERDYLRKIIVQGRSSKSTKVGDIMTE--ENKLITVTPET 149
#
#
# >At1g02930
# Length = 208
#
# Score = 29.6 bits (65), Expect = 8.3
# Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 13/136 (9%)
#
# Query: 66 DPHLYTATAGDVEWLGNADLILYNGLHLETKMGEVFSKLRGSRLVVAVSETIPVSQRLSL 125
# +P + G V + D ++ + + FS +G+ L+ + ++ + +
# Sbjct: 44 EPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSD-KGNNLLSTGKDMAIIAMGIEI 102
#
# Query: 126 EEAEFDPHVWFDVKLWSYSVKAVYESLCKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKA 185
# E EFDP K V+E + K L G T + T + + LD Y R
# Sbjct: 103 ESHEFDP----------VGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLG 152
#
# Query: 186 QS--LPAERRVLVTAH 199
# +S L ++ LV H
# Sbjct: 153 ESKYLASDHFTLVDLH 168
#
#
# >7291239
# Length = 562
#
# Score = 29.6 bits (65), Expect = 8.3
# Identities = 20/80 (25%), Positives = 33/80 (41%)
#
# Query: 153 CKLLPGKTREFTQRYQAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFE 212
# C L KT E Q+Q+D L + ++L E + D + A+ E
# Sbjct: 259 CSLAEKKTEELGAHINKQQKQVDLLQKQLVESRETLVKEAALRKDLEDQWQEKREAHKSE 318
#
# Query: 213 VKGLQGVSTASEASAHDMQE 232
# V+ L+ + +E DMQ+
# Sbjct: 319 VQSLRDQAKTNEQRLLDMQQ 338
#
#
Database: kyva
Posted date: Nov 11, 2002 5:09 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Lambda K H
0.320 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,919,963
Number of Sequences: 112920
Number of extensions: 980155
Number of successful extensions: 2362
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2361
Number of HSP's gapped (non-prelim): 8
length of query: 308
length of database: 47,500,486
effective HSP length: 109
effective length of query: 199
effective length of database: 35,192,206
effective search space: 7003248994
effective search space used: 7003248994
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
S2: 65 (29.6 bits)