Submitter records for this RefSNP Cluster

NCBI Assay ID	Handle|Submitter ID	Validation Status	ss to rs Orientation /Strand	Alleles	5' Near Seq 30 bp	3' Near Seq 30 bp	Entry Date	Update Date	Build Added	Molecule Type	Freq Warning	Ancestral Allele	Success Rate
ss2885818	TSC-CSHL|TSC0927206		fwd/T	A/G	aatcggaccctacccacaccacacaaaagc	aattcagagtaaacacctagatgcagggga	01/03/01	10/25/06	92	Genomic			unknown
ss9826924	BCM_SSAHASNP|chr1.NT_004873.14_2352402		fwd/T	A/G	aatcggaccctacccacaccacacaaaagc	aattcagagtaaacacctagatgcagggga	06/27/03	10/10/03	116	Genomic			unknown
ss67605389	ILLUMINA|HumanHap650Yv1.0_rs1980607		fwd/T	A/G	aatcggaccctacccacaccacacaaaagc	aattcagagtaaacacctagatgcagggga	11/14/06	11/14/06	127	Genomic			unknown
ss71255260	ILLUMINA|HumanHap650Yv3.0_rs1980607		fwd/T	A/G	aatcggaccctacccacaccacacaaaagc	aattcagagtaaacacctagatgcagggga	04/23/07	04/23/07	127	Genomic			unknown
ss75378849	ILLUMINA|ILMN_Human_1M_rs1980607		fwd/T	A/G	aatcggaccctacccacaccacacaaaagc	aattcagagtaaacacctagatgcagggga	08/28/07	08/29/07	129	Genomic			unknown

Fasta sequence   (Legend)

 gcccaggctg gtctcgaact cctgagctca aagtgattcg cctgcctcag cctcccaaag
 tgctgggatt acaggcgtga gctgctgcgc ctggcTGGTG ATGTTTCCTA TTAGAACATG
 GCAGTATAGT TTTCTGCACA TTTTGATTTT TTCCCCCTAG TCAAGATTCC TATAAGTGAA
 ACTACTGAAT CAAAGTTACG GATGCTTTAG GACTCTTGAT ATGTTGCTAA CCTGTACCAA
 TCCAGTTTAT CCACCACTGA ATGAATATTC ATCTTAGTGT CCTATACTGT TAAGGAATAT
 TAGTTTTCCC TCTTAAATTT ACAAATAAGG Tgggtgtggt ggctcatgtc tgaaatccta
 gcactttgag aggccaaggt gggcagattg cttgagctca ggagtttgag accagcctgg
 gggccatagc gaaaccacat ctctactaaa actacaaaaa attagccggt tgtcatgacc
 gtacgcctgt agtcccagct actcaggagg ctgaggtgag aggatcactt gaacccggga
 ggcaaaggtt gcagtgagcc gagatcatgc cagtgtactt cagcctgggc aatagagcaa
 tactcttttc tcaaaaaaaa TTTTTTTTTA CAAATAAAAG AGTGGTTTCT TATTGTAAGT
 TACTTTTCTT TCATTGTAAA TGATAGTTTT TCTGCACATT TGCTCTTCCT TTCTTTTGAA
 ATATGTATGT CTGTTTATTA GGGTCTTTGT GTTTCTCTTA TTGATTTGTG TAGGATAAAG
 ATAGTTCAAC TACCTTACAC TTTCCTAAAC ACAGTAGGAC TAAGAGTTTT GCAGGAATAC
 CATAAACTGG TTCCTTCAGG GGCTGAGTTC TCAGATTTTT GATGACTTTA AATGAGAAGA
 TAATAGGAGG AGACAAAATA AGTACCAAGC TCTGTGGCCA TCCTTGTGGA TTTTACAACC
 GTGGCTATGA TCAGCATGAA AAAACCCTTA TAGCAATAGG GGAAACCTAA ATAAAAGGAA
 AGCTTTACCA TGGATTAGAG ATTCAGTATG TTGGGGGTGG CAGTTCTCCC ACATTAATCC
 ACAGAACCAT TGAGATGCCA TCAAAATCCT GGTAGATTTT TTGTGAGACT GGATGTGCTC
 ATTTTAAATT TGGCGTGGGC CCTATATTGT GAGAATGGGC AAAATACTCT AGAAAAACAT
 TGCCTTCTAG ATATCAAAGG ACTATCTAGA AGATATGAGT AGAAACAAAC CCATGATTCT
 ATGAACATTG ATCAATGAGA GGAAGTCTTA CAGAGCAATG GGGAAATGTT AGGAAATGTT
 GCTGGGACAA GAGGTATCCA TGGGGAGAAA TGAATTAGAA ATCGGACCCT ACCCACACCA
 CACAAAAGC
 R
 AATTCAGAGT AAACACCTAg atgcagggga gggaggattg cttgagccta ggagtttgag
 accagcctgg gcaacgtagc agaccctgt

GeneView

Group Label	Contig->mRNA	Gene Model (contig mRNA transcript) Color Legend
reference	NT_004873->NM_032341 function

Integrated Maps:

NCBI Resource Links

Population Diversity

	Sample Ascertainment				Genotype Detail				Alleles
ss#	Population	Individual Group	Chrom. Sample Cnt.	Source	A/A	A/G	G/G	HWP	A	G
ss2885818	HapMap-CEU	European	118	IG	0.525	0.356	0.119	0.273	0.703	0.297
	HapMap-HCB	Asian	90	IG	0.867	0.133		0.655	0.933	0.067
	HapMap-JPT	Asian	88	IG	0.886	0.114		0.752	0.943	0.057
	HapMap-YRI	Sub-Saharan African	120	IG	0.100	0.583	0.317	0.100	0.392	0.608

Validation Summary:

Validation status	Marker displays Mendelian segregation	PCR results confirmed in multiple reactions	Homozygotes detected in individual genotype data
DoubleHit found by:  BCM_SSAHASNP, NCBI	UNKNOWN	UNKNOWN	UNKNOWN