BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu0599
(248 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24379130|ref|NP_721085.1| putative MutG [Streptococcus m... 422 e-117
gi|9802354|gb|AAF99693.1|AF267498_3 MutG [Streptococcus mut... 236 8e-61
gi|49186615|ref|YP_029867.1| bacteriocin ABC transporter, p... 124 6e-27
gi|47568268|ref|ZP_00238971.1| lantibiotic transport-associ... 122 1e-26
gi|30263771|ref|NP_846148.1| bacteriocin ABC transporter, p... 121 3e-26
gi|153953914|ref|YP_001394679.1| hypothetical protein CKL_1... 121 3e-26
gi|65321092|ref|ZP_00394051.1| COG4200: Uncharacterized pro... 119 1e-25
gi|148379550|ref|YP_001254091.1| lantibiotic ABC transporte... 115 3e-24
gi|28210357|ref|NP_781301.1| lantibiotic transport-associat... 115 3e-24
gi|118443593|ref|YP_877512.1| antibiotic transport-associat... 112 2e-23
gi|150018152|ref|YP_001310406.1| antibiotic transport-assoc... 105 3e-21
gi|52078767|ref|YP_077558.1| hypothetical protein BL01673 [... 103 7e-21
gi|56962980|ref|YP_174707.1| lantibiotic ABC transporter pe... 102 2e-20
gi|595322|gb|AAB91595.1| SpaG [Bacillus subtilis] 98 4e-19
gi|153938672|ref|YP_001390927.1| antibiotic ABC transporter... 98 5e-19
gi|153931434|ref|YP_001383927.1| antibiotic ABC transporter... 96 2e-18
gi|16223979|gb|AAL15575.1|AF233755_13 putative SpaG [Bacill... 96 2e-18
gi|126698950|ref|YP_001087847.1| putative lantibiotic ABC t... 95 4e-18
gi|154687500|ref|YP_001422661.1| SpaG [Bacillus amyloliquef... 94 1e-17
gi|145955085|ref|ZP_01804089.1| hypothetical protein CdifQ_... 89 3e-16
gi|154503428|ref|ZP_02040488.1| hypothetical protein RUMGNA... 88 4e-16
gi|56418845|ref|YP_146163.1| lantibiotic ABC transporter (p... 88 6e-16
gi|153853494|ref|ZP_01994874.1| hypothetical protein DORLON... 83 2e-14
gi|138893948|ref|YP_001124401.1| SpaG [Geobacillus thermode... 80 8e-14
gi|154484427|ref|ZP_02026875.1| hypothetical protein EUBVEN... 80 8e-14
gi|71903452|ref|YP_280255.1| lantibiotic transport permease... 70 8e-11
gi|15675075|ref|NP_269249.1| conserved hypothetical protein... 69 2e-10
gi|94990434|ref|YP_598534.1| Lantibiotic transport permease... 69 2e-10
gi|145955912|ref|ZP_01804912.1| hypothetical protein CdifQ_... 69 2e-10
gi|126698057|ref|YP_001086954.1| putative lantibiotic ABC t... 69 2e-10
gi|86559590|ref|YP_473411.1| permease [Clostridium perfring... 59 2e-07
>gi|24379130|ref|NP_721085.1| putative MutG [Streptococcus mutans UA159]
gi|24377034|gb|AAN58391.1|AE014909_7 putative MutG [Streptococcus mutans UA159]
Length = 248
Score = 422 bits (1085), Expect = e-117, Method: Composition-based stats.
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP 60
MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP
Sbjct: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP 60
Query: 61 LVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLYR 120
LVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLYR
Sbjct: 61 LVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLYR 120
Query: 121 SKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLG 180
SKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLG
Sbjct: 121 SKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLG 180
Query: 181 DNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILSIIWFDR 240
DNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILSIIWFDR
Sbjct: 181 DNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILSIIWFDR 240
Query: 241 WQGRSNEE 248
WQGRSNEE
Sbjct: 241 WQGRSNEE 248
>gi|9802354|gb|AAF99693.1|AF267498_3 MutG [Streptococcus mutans]
Length = 246
Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats.
Identities = 146/248 (58%), Positives = 191/248 (77%), Gaps = 2/248 (0%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP 60
M+ L+ AE +KY TFLPW+H+ILPV A++ V+GL+TP +SW IT GYL++LGI+FP
Sbjct: 1 MIDLLKAENVKYRHTFLPWLHLILPVTTAIVVIVYGLMTPTHSWADITGGYLELLGISFP 60
Query: 61 LVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLYR 120
+VIA+ C K+V LE EAG FQ +LA QR +++ IKL+NL+++E+ + LA+ ++GL+Y
Sbjct: 61 IVIAVICGKSVGLEVEAGQFQVMLAIKQRNLIFCIKLLNLLILELFSTLLAIGIYGLIY- 119
Query: 121 SKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLG 180
++ +L FYGYA +LL AS +ILYL+HLV+ FLF + A IGLGI E L+SALLLTGLG
Sbjct: 120 -QLSNKHLIFYGYAVILLTASMLILYLIHLVVVFLFGNSANIGLGIAESLLSALLLTGLG 178
Query: 181 DNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILSIIWFDR 240
D IWQF+P AW RLMGTL + Y F QQ+L+WLEVAVPLTLMALILSIIWFDR
Sbjct: 179 DGIWQFIPCAWGTRLMGTLINLWYYSGHSLFFKQQLLIWLEVAVPLTLMALILSIIWFDR 238
Query: 241 WQGRSNEE 248
WQGRS++E
Sbjct: 239 WQGRSSDE 246
>gi|49186615|ref|YP_029867.1| bacteriocin ABC transporter, permease protein subunit, putative
[Bacillus anthracis str. Sterne]
gi|49180542|gb|AAT55918.1| bacteriocin ABC transporter, permease protein subunit, putative
[Bacillus anthracis str. Sterne]
Length = 260
Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 20/255 (7%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPV-GIAVLTAVFGLVTPAYSWGSITS-----GYLQV 54
+ +++ A+F+K T WIHV +P+ GIA+ + YS+ + S GY+QV
Sbjct: 12 LSRVLRADFIKMKHTIFFWIHVAMPIIGIALFLSY-------YSFSKLDSINKVLGYIQV 64
Query: 55 LGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLM-----EIIAVC 109
L I+FPL+I+I CS VE EA AG+F+ +L+ + I V L+L+ ++AV
Sbjct: 65 LSISFPLLISIVCSSVVEQEALAGNFKELLSTEYGRRKALISKVCLLLICGFCSTMLAVV 124
Query: 110 LALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEV 169
+ F L + ++P+ A Y +L + + +Y+ HL + F F GA+IG+GI E
Sbjct: 125 GFATGFHFLL-GQNEIPF-ALYVEISFILFSCQIFMYIWHLFLNFRFSKGASIGIGIIES 182
Query: 170 LVSALLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLM 229
L++AL+LTG+GD IW++ P AW RL E P + + V T++
Sbjct: 183 LLAALMLTGMGDVIWKYTPCAWSMRLCNYFLEYKLSPSSIRALPVEAATGAVICVCFTII 242
Query: 230 ALILSIIWFDRWQGR 244
A ++S++WF ++GR
Sbjct: 243 AFVISLMWFSFYEGR 257
>gi|47568268|ref|ZP_00238971.1| lantibiotic transport-associated permease spaG/mutG [Bacillus
cereus G9241]
gi|47555096|gb|EAL13444.1| lantibiotic transport-associated permease spaG/mutG [Bacillus
cereus G9241]
Length = 252
Score = 122 bits (307), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/250 (33%), Positives = 140/250 (56%), Gaps = 10/250 (4%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPV-GIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAF 59
+ +++ A+F+K T WIHV +P+ GIA+ + + + + SGY+QVL I+F
Sbjct: 4 LSRILRADFIKMKHTIFFWIHVAMPIIGIALFLSYYSF--SKFDSINKVSGYIQVLSISF 61
Query: 60 PLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLM-----EIIAVCLALSV 114
PL+I+I S VE EA AG+F+ +L+ + I V L+L+ ++AV +V
Sbjct: 62 PLLISIVSSSVVEQEALAGNFKELLSTEYGRRKALISKVCLLLICGFCSTMLAVVGFATV 121
Query: 115 FGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSAL 174
F L + ++P+ A Y +L + + +Y+ HL + F F GA+IG+GI E L++AL
Sbjct: 122 FHFLL-GQNEIPF-ALYVEISFILFSCQIFIYIWHLFLNFRFSKGASIGIGIIESLLAAL 179
Query: 175 LLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILS 234
+LTG+GD IW+++P AW ARL P + + + V T++A ++S
Sbjct: 180 MLTGMGDVIWKYMPCAWGARLCNYFLGYKLSPSSIRVLPVEAATGAVICVCFTIIAFVIS 239
Query: 235 IIWFDRWQGR 244
++WF ++GR
Sbjct: 240 LMWFSFYEGR 249
>gi|30263771|ref|NP_846148.1| bacteriocin ABC transporter, permease protein subunit, putative
[Bacillus anthracis str. Ames]
gi|47529190|ref|YP_020539.1| bacteriocin abc transporter, permease protein subunit, putative
[Bacillus anthracis str. 'Ames Ancestor']
gi|30258415|gb|AAP27634.1| bacteriocin ABC transporter, permease protein subunit, putative
[Bacillus anthracis str. Ames]
gi|47504338|gb|AAT33014.1| bacteriocin ABC transporter, permease protein subunit, putative
[Bacillus anthracis str. 'Ames Ancestor']
Length = 252
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 20/255 (7%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPV-GIAVLTAVFGLVTPAYSWGSITS-----GYLQV 54
+ +++ A+F+K T WIHV +P+ GIA+ + YS+ + S GY+QV
Sbjct: 4 LSRVLRADFIKMKHTIFFWIHVAMPIIGIALFLSY-------YSFSKLDSINKVLGYIQV 56
Query: 55 LGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLM-----EIIAVC 109
L I+FPL+I+I CS VE EA AG+F+ +L+ + I V L+L+ ++AV
Sbjct: 57 LSISFPLLISIVCSSVVEQEALAGNFKELLSTEYGRRKALISKVCLLLICGFCSTMLAVV 116
Query: 110 LALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEV 169
+ F L + ++P+ A Y +L + + +Y+ HL + F F GA+IG+GI E
Sbjct: 117 GFATGFHFLL-GQNEIPF-ALYVEISFILFSCQIFMYIWHLFLNFRFSKGASIGIGIIES 174
Query: 170 LVSALLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLM 229
L++AL+LTG+GD IW++ P AW RL E P + + V T++
Sbjct: 175 LLAALMLTGMGDVIWKYTPCAWSMRLCNYFLEYKLSPSSIRALPVEAATGAVICVCFTII 234
Query: 230 ALILSIIWFDRWQGR 244
A ++S++WF ++GR
Sbjct: 235 AFVISLMWFSFYEGR 249
>gi|153953914|ref|YP_001394679.1| hypothetical protein CKL_1289 [Clostridium kluyveri DSM 555]
gi|146346795|gb|EDK33331.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
Length = 246
Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 124/199 (62%), Gaps = 3/199 (1%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVL-TAVFGLVTPAYSWGSITSGYLQVLGIAF 59
+++LI ++F K T + W+H+I+P+ I++L A +G T A S Y QVL + F
Sbjct: 4 LIRLIGSDFYKVRHTAIFWMHIIVPILISLLFVAYYGTSTAAVDNVSKMGLYTQVLSMGF 63
Query: 60 PLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLY 119
PL+I I C+ AVE E +AG+F+ +L + + + + K+ L+ M ++ +A+ +F L
Sbjct: 64 PLIIGIVCAMAVEQEYDAGNFRGLLMSEHKLLSFSSKICALLFMAFFSLIIAIGIFALEL 123
Query: 120 RSKIDVPYLAFYGYAGLLLIA--STVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLT 177
+ FY Y ++LI S + LY+LHL+++F F +GA+IGLGI E L+SAL+LT
Sbjct: 124 EFLVHEDVFNFYIYGNIILILLFSQIFLYILHLLLSFRFGTGASIGLGITESLISALMLT 183
Query: 178 GLGDNIWQFVPAAWPARLM 196
GLGD I +++P +W R++
Sbjct: 184 GLGDVIGKWLPCSWGGRII 202
>gi|65321092|ref|ZP_00394051.1| COG4200: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
Length = 501
Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats.
Identities = 84/255 (32%), Positives = 138/255 (54%), Gaps = 20/255 (7%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPV-GIAVLTAVFGLVTPAYSWGSITS-----GYLQV 54
+ +++ A+F+ T WIHV +P+ GIA+ + YS+ + S GY+QV
Sbjct: 253 LSRVLRADFIXMKHTIFFWIHVAMPIIGIALFLSY-------YSFSKLDSINKVLGYIQV 305
Query: 55 LGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLM-----EIIAVC 109
L I+FPL+I+I CS VE EA AG+F+ +L+ + I V L+L+ ++AV
Sbjct: 306 LSISFPLLISIVCSSVVEQEALAGNFKELLSTEYGRRKALISKVCLLLICGFCSTMLAVV 365
Query: 110 LALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEV 169
+ F L + ++P+ A Y +L + + +Y+ HL + F F GA+IG+GI E
Sbjct: 366 GFATGFHFLL-GQNEIPF-ALYVEISFILFSCQIFMYIWHLFLNFRFSKGASIGIGIIES 423
Query: 170 LVSALLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLM 229
L++AL+LTG+GD IW++ P AW RL E P + + V T++
Sbjct: 424 LLAALMLTGMGDVIWKYTPCAWSMRLCNYFLEYKLSPSSIRALPVEAATGAVICVCFTII 483
Query: 230 ALILSIIWFDRWQGR 244
A ++S++WF ++GR
Sbjct: 484 AFVISLMWFSFYEGR 498
>gi|148379550|ref|YP_001254091.1| lantibiotic ABC transporter, permease protein [Clostridium
botulinum A str. ATCC 3502]
gi|153936123|ref|YP_001387473.1| antibiotic ABC transporter, permease protein [Clostridium botulinum
A str. Hall]
gi|148289034|emb|CAL83123.1| putative lantibiotic ABC transporter, permease protein [Clostridium
botulinum A str. ATCC 3502]
gi|152932037|gb|ABS37536.1| antibiotic ABC transporter, permease protein [Clostridium botulinum
A str. Hall]
Length = 247
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 85/251 (33%), Positives = 143/251 (56%), Gaps = 10/251 (3%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITS--GYLQVLGIA 58
+ + I ++F K RT + W+HV +P+ + + +F L S G+I S GYL+ + I
Sbjct: 4 LFRCIKSDFYKLKRTPILWLHVFIPI---LGSFLFLLYYSFGSKGNIDSICGYLETVAIV 60
Query: 59 FPLVIAITCSKAVELEAEAGHFQTVLANSQ-RKVLYFIKLVNLMLMEIIAVCLALSVFGL 117
FPL+I + +E E G+FQ +L++++ + + Y KLV L+L+ I +V +A+ VF L
Sbjct: 61 FPLLIGLMSGMVIEQEERTGNFQMLLSSTKCKSITYLSKLVLLLLLGIFSVIIAIGVFAL 120
Query: 118 LYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLT 177
++ K+D FY ++L + V+LY+LH+++ GA+IGLGI L+SAL+LT
Sbjct: 121 GFK-KMDA---MFYVQEAVVLFVANVLLYILHVLVTLKLGRGASIGLGIAGTLLSALMLT 176
Query: 178 GLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILSIIW 237
GLGD +WQ+ P A+ R + P I ++ + + + +ALI S++W
Sbjct: 177 GLGDRVWQWTPWAFGVRFCDYTMLKIIDPSNYNIVSRDVNKGFFIMIFEICIALIASLLW 236
Query: 238 FDRWQGRSNEE 248
F W+GR + E
Sbjct: 237 FKYWEGRKSYE 247
>gi|28210357|ref|NP_781301.1| lantibiotic transport-associated permease spaG/mutG [Clostridium
tetani E88]
gi|28202794|gb|AAO35238.1| lantibiotic transport-associated permease spaG/mutG [Clostridium
tetani E88]
Length = 258
Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 116/203 (57%), Gaps = 4/203 (1%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP 60
+++L+ A+F+K T WIH+ LPV V+ + + S G + +GYL L + FP
Sbjct: 3 ILRLMKADFIKMKHTSFYWIHICLPVVGIVMFLGYYSFSILGSIGKV-NGYLDALSLVFP 61
Query: 61 LVIAITCSKAVELEAEAGHFQTVLANSQRK-VLYFIKLVNLMLMEIIAVCLALSVF--GL 117
++I I CS +E E AG F+ +L+ K + K++ +++M ++ LA+ F G
Sbjct: 62 VLIGIICSTVIEQEVMAGKFKEMLSIEYGKGICLLSKILVVLVMGFFSLSLAVGGFFIGF 121
Query: 118 LYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLT 177
Y K ++ FY LL+ S + +YL HL ++ F SGA+IG+GIFE L SAL++T
Sbjct: 122 EYVLKQNILPFKFYVILTLLIFVSQIFIYLFHLWLSIKFGSGASIGMGIFESLFSALIIT 181
Query: 178 GLGDNIWQFVPAAWPARLMGTLF 200
GLGD IWQ++P AW R F
Sbjct: 182 GLGDGIWQWIPCAWSVRFCNNFF 204
>gi|118443593|ref|YP_877512.1| antibiotic transport-associated permease spaG/mutG [Clostridium
novyi NT]
gi|118134049|gb|ABK61093.1| antibiotic transport-associated permease spaG/mutG [Clostridium
novyi NT]
Length = 258
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 85/260 (32%), Positives = 142/260 (54%), Gaps = 17/260 (6%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPV-GIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAF 59
+++L+ A+F+K T WIH+ +P+ GI + + + A S G + +GYL L + F
Sbjct: 3 ILRLMKADFIKMKHTSFYWIHICVPIIGILIFLGYYSF-SIAGSIGKV-NGYLDGLSLVF 60
Query: 60 PLVIAITCSKAVELEAEAGHFQTVLANSQRK-VLYFIKLVNLMLMEIIAVCLALSVF--G 116
P+VI I CS +E E +AG F+ +L+ K + K++ +++M ++ LA+ F G
Sbjct: 61 PVVIGIVCSMVIEQELKAGKFKEMLSVEYGKGICLLSKVLVVLVMGFFSLSLAVGGFFIG 120
Query: 117 LLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLL 176
Y + ++ FY LL+ + + +YL HL ++ F SGA+IG+GIFE L SAL++
Sbjct: 121 FEYILRQNILPFKFYAVLTLLIFMAQIFIYLFHLWLSIKFGSGASIGMGIFESLFSALII 180
Query: 177 TGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQI---------LLWLEVAVPLT 227
TGLGD IWQ++P AW R F ++ + IF + + + T
Sbjct: 181 TGLGDGIWQWIPCAWSIRFCNNFF--IKKANSIDIFNKLADFNTGLSINAIGFRNCIIYT 238
Query: 228 LMALILSIIWFDRWQGRSNE 247
++ IL IWF+ ++GR +E
Sbjct: 239 IILGILFGIWFNFFEGRKSE 258
>gi|150018152|ref|YP_001310406.1| antibiotic transport-associated permease SpaG/MutG [Clostridium
beijerinckii NCIMB 8052]
gi|149904617|gb|ABR35450.1| antibiotic transport-associated permease SpaG/MutG [Clostridium
beijerinckii NCIMB 8052]
Length = 258
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 8/205 (3%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSIT--SGYLQVLGIA 58
+++L+ A+F+K T WIH+ LP+ + T +F +W S+ +GYL+VL +
Sbjct: 3 ILRLLKADFIKMKHTPFYWIHICLPI---IGTIIFLEYYSFSTWNSVNKINGYLEVLSLT 59
Query: 59 FPLVIAITCSKAVELEAEAGHFQTVLANSQRK-VLYFIKLVNLMLMEIIAVCLALSVF-- 115
FP++I I CS A+E E AG F+ +L+ K + K++ L+L + ++ LA+ +F
Sbjct: 60 FPVLIGIVCSMAIEQEVMAGKFKEMLSIEYGKGMCLLSKILILLLTGLFSLSLAVGIFFA 119
Query: 116 GLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALL 175
G + + + L FY ++ + YL HL ++ SGA+IG+GI E L+SALL
Sbjct: 120 GFQFILRQNTLPLNFYLNIIFIIFGVQIFFYLFHLWLSIKIGSGASIGMGILESLLSALL 179
Query: 176 LTGLGDNIWQFVPAAWPARLMGTLF 200
+TGLGD IWQ++P W + F
Sbjct: 180 ITGLGDGIWQWIPCGWSVKFCDNFF 204
>gi|52078767|ref|YP_077558.1| hypothetical protein BL01673 [Bacillus licheniformis ATCC 14580]
gi|52784137|ref|YP_089966.1| hypothetical protein BLi00314 [Bacillus licheniformis ATCC 14580]
gi|52001978|gb|AAU21920.1| SpaG [Bacillus licheniformis ATCC 14580]
gi|52346639|gb|AAU39273.1| putative protein [Bacillus licheniformis DSM 13]
Length = 256
Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 128/244 (52%), Gaps = 7/244 (2%)
Query: 7 AEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFPLVIAIT 66
A+F K RT W+H+ +PV A + ++ + + Y + + IA PL+I I
Sbjct: 10 ADFQKTKRTSFIWLHLSVPVICAGVFLLYFYNRQPDPY-QLYRTYFEAIAIALPLLIGIV 68
Query: 67 CSKAVELEAEAGHFQTVLANSQRKVL-YFIKLVNLMLMEIIAVCLALSVFGLLYRSKIDV 125
C LE +AG FQ +L + K+ Y K+ L++M I AV LA+ ++ L R+ V
Sbjct: 69 CGMTASLEEQAGRFQVLLGGTAPKLTAYLSKVTLLLIMNIFAVFLAIGLYLLGLRALFHV 128
Query: 126 PYL--AFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLGDNI 183
P L + + AG L A +V LY ++ +I+ F GA+I G +L++AL+ TGLGD I
Sbjct: 129 PNLPSSLFLEAGAWLAAGSVTLYFIYFLISCTFGMGASILAGGAGLLMTALMNTGLGDVI 188
Query: 184 WQFVPAAWPARLMG--TLFEMLQY-PDQKPIFAQQILLWLEVAVPLTLMALILSIIWFDR 240
W++ P AW RL G + +Q P + + +I + V + LSIIWF R
Sbjct: 189 WKYNPWAWGIRLTGYKGIDRFVQIDPSLRSVLDGEIKQGAFIMVFAIIAVFALSIIWFIR 248
Query: 241 WQGR 244
W+GR
Sbjct: 249 WEGR 252
>gi|56962980|ref|YP_174707.1| lantibiotic ABC transporter permease [Bacillus clausii KSM-K16]
gi|56909219|dbj|BAD63746.1| lantibiotic ABC transporter permease [Bacillus clausii KSM-K16]
Length = 253
Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats.
Identities = 74/254 (29%), Positives = 138/254 (54%), Gaps = 9/254 (3%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP 60
+++ ++A+ LK RT W+H++ P+ + + ++ V I ++ L IA P
Sbjct: 3 LLRCLYADVLKTKRTAFMWVHLLAPLLYSAVCLLYFHVR-ELDGAHIYELFMTPLAIALP 61
Query: 61 LVIAITCSKAVELEAEAGHFQTVLANSQRKVL-YFIKLVNLMLMEIIAVCLALSVFGLLY 119
V+A+ C +V E AGHFQ ++ K++ YF K++ L+L+ +++ LA+ + L +
Sbjct: 62 FVVALVCGLSVSQEERAGHFQNIVGAPLPKLIPYFSKMIFLILLNGVSIFLAIGLLSLGF 121
Query: 120 RS-KIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTG 178
++P L F G L+A++V+LY + ++ LF GA+ G+ +L++AL+ TG
Sbjct: 122 LLSHAELPLLPFL-IGGAWLVATSVVLYFFYFFVSCLFGIGASALFGVAGLLMTALMGTG 180
Query: 179 LGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIF----AQQILLWLEVAVPLTLMALILS 234
LGD W++ P AW RL G ++++ +P+F Q++ + + L ++S
Sbjct: 181 LGDAWWKYNPWAWGTRLSGYA-GIVEFEQMEPVFLSFLQQELRTGFMIVASVILFVTVIS 239
Query: 235 IIWFDRWQGRSNEE 248
IWF RW+G+ E
Sbjct: 240 SIWFHRWEGKKALE 253
>gi|595322|gb|AAB91595.1| SpaG [Bacillus subtilis]
Length = 203
Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 119/204 (58%), Gaps = 8/204 (3%)
Query: 52 LQVLGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLMEIIAVCL 110
++ + +A PL+I + C LE +AG F +L ++ K++ ++ K+ L+ +EI ++ L
Sbjct: 1 MEAIAVALPLLIGVLCGMTASLEEQAGKFHVLLGSTSPKIVAYVSKVFMLLFLEICSIGL 60
Query: 111 ALSVFGLLYRSKIDVPYLAF--YGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFE 168
AL ++ + + + VP L++ + G L+A +V+LY ++ I+ +F GA++ +G
Sbjct: 61 ALFIYFIGLKFILKVPDLSYDIFIMGGAWLVAGSVVLYCIYFFISCMFGMGASVLIGGAG 120
Query: 169 VLVSALLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPD----QKPIFAQQILLWLEVAV 224
+L++AL+ TGLGD IW+F P AW RL +L E+L + + P+ +I + + V
Sbjct: 121 LLMTALMNTGLGDAIWKFNPWAWGIRL-SSLNEVLHFKEVNQGHHPLLMHEINSGVLMMV 179
Query: 225 PLTLMALILSIIWFDRWQGRSNEE 248
+ +I S+IWF +W+GR E
Sbjct: 180 FGIICTIIASLIWFSKWEGRKTFE 203
>gi|153938672|ref|YP_001390927.1| antibiotic ABC transporter, permease protein [Clostridium botulinum
F str. Langeland]
gi|152934568|gb|ABS40066.1| antibiotic ABC transporter, permease protein [Clostridium botulinum
F str. Langeland]
Length = 191
Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 112/195 (57%), Gaps = 5/195 (2%)
Query: 55 LGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQ-RKVLYFIKLVNLMLMEIIAVCLALS 113
+ I FPL+I + +E E G+FQ +L++++ + + Y KLV L+L+ I +V +A+
Sbjct: 1 MAIVFPLLIGLMSGMVIEQEERTGNFQMLLSSTKCKSITYLSKLVLLLLLGIFSVIIAIG 60
Query: 114 VFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSA 173
VF L ++ K+D FY ++L + V+LY+LH+++ GA+IGLGI L+SA
Sbjct: 61 VFALGFK-KMDA---MFYAQEAVVLFVANVLLYILHVLVTLKLGRGASIGLGIVGTLLSA 116
Query: 174 LLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALIL 233
L+LTGLGD +WQ+ P A+ R + P I ++ + + + +ALI
Sbjct: 117 LMLTGLGDRVWQWTPWAFGVRFCDYTMLKIIDPSNYNIVSRDVNKGFFIMIFEICIALIA 176
Query: 234 SIIWFDRWQGRSNEE 248
S++WF W+GR + E
Sbjct: 177 SLLWFKYWEGRKSYE 191
>gi|153931434|ref|YP_001383927.1| antibiotic ABC transporter, permease protein [Clostridium botulinum
A str. ATCC 19397]
gi|152927478|gb|ABS32978.1| antibiotic ABC transporter, permease protein [Clostridium botulinum
A str. ATCC 19397]
Length = 191
Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 112/195 (57%), Gaps = 5/195 (2%)
Query: 55 LGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQ-RKVLYFIKLVNLMLMEIIAVCLALS 113
+ I FPL+I + +E E G+FQ +L++++ + + Y KLV L+L+ I +V +A+
Sbjct: 1 MAIVFPLLIGLMSGMVIEQEERTGNFQMLLSSTKCKSITYLSKLVLLLLLGIFSVIIAIG 60
Query: 114 VFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSA 173
VF L ++ K+D FY ++L + V+LY+LH+++ GA+IGLGI L+SA
Sbjct: 61 VFALGFK-KMDA---MFYVQEAVVLFVANVLLYILHVLVTLKLGRGASIGLGIAGTLLSA 116
Query: 174 LLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALIL 233
L+LTGLGD +WQ+ P A+ R + P I ++ + + + +ALI
Sbjct: 117 LMLTGLGDRVWQWTPWAFGVRFCDYTMLKIIDPSNYNIVSRDVNKGFFIMIFEICIALIA 176
Query: 234 SIIWFDRWQGRSNEE 248
S++WF W+GR + E
Sbjct: 177 SLLWFKYWEGRKSYE 191
>gi|16223979|gb|AAL15575.1|AF233755_13 putative SpaG [Bacillus subtilis]
Length = 203
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/204 (31%), Positives = 120/204 (58%), Gaps = 8/204 (3%)
Query: 52 LQVLGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLMEIIAVCL 110
++ + +A PL+I + C LE +AG F+ +L ++ K++ ++ K + L+LM I ++ +
Sbjct: 1 MEAIAVAMPLLIGVLCGMTASLEEQAGKFKVLLGSTSPKIIAYVSKTLLLILMNICSISI 60
Query: 111 ALSVFGLLYRSKIDVPYLAFYGY--AGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFE 168
++ + L + + VP L++ + G L+A ++ LY ++ I+ +F +GA++ +G
Sbjct: 61 SIISYLLGLKFILKVPNLSYTIFISGGAWLVAGSIALYFIYFFISLMFGTGASVLIGGAG 120
Query: 169 VLVSALLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPD----QKPIFAQQILLWLEVAV 224
+L+++L+ TGLGD IW++ P AW RL G L MLQ+ + KP F Q+I + + +
Sbjct: 121 LLMTSLMNTGLGDIIWKYNPWAWGVRLSG-LNGMLQFKEINEKLKPFFIQEINIGALIVI 179
Query: 225 PLTLMALILSIIWFDRWQGRSNEE 248
+ +S+IWF RW+GR E
Sbjct: 180 FSIICLFTVSLIWFSRWEGRQTFE 203
>gi|126698950|ref|YP_001087847.1| putative lantibiotic ABC transporter, permease protein [Clostridium
difficile 630]
gi|115250387|emb|CAJ68209.1| putative lantibiotic ABC transporter, permease protein [Clostridium
difficile 630]
Length = 252
Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 133/256 (51%), Gaps = 15/256 (5%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFP 60
++++ ++ +K R F+ +H+ + + L + V+ A + I GYLQV+ IAFP
Sbjct: 4 LIRIFCSDLIKLKRNFIILMHICIALMGMGLFLWYYKVSGADNILKIV-GYLQVIAIAFP 62
Query: 61 LVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLA-----LSVF 115
L+ + CS VE E AG+++ +L S K L I II VCL +SV
Sbjct: 63 LLSGVVCSMFVEQEYYAGNYKHMLTTSNPKYLTLIS------KYIILVCLGFVATLVSVL 116
Query: 116 GLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALL 175
G + +FY + L+LIA + Y+LHL ++ F G +IG+GI E+L+SALL
Sbjct: 117 GFKFGISKAYFTSSFYMISILILIACNLFEYILHLFLSLRFGKGTSIGVGIVEMLLSALL 176
Query: 176 LTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVP---LTLMALI 232
LTGLG IWQ+ P AW R + + I + I + + +T++A +
Sbjct: 177 LTGLGSGIWQYFPCAWGVRFITIWSSFSSSKTVEYIKVESIKSYQSTGLICGFVTILAFV 236
Query: 233 LSIIWFDRWQGRSNEE 248
+ IWF +W+G+ +EE
Sbjct: 237 ILCIWFSKWEGKKSEE 252
>gi|154687500|ref|YP_001422661.1| SpaG [Bacillus amyloliquefaciens FZB42]
gi|154353351|gb|ABS75430.1| SpaG [Bacillus amyloliquefaciens FZB42]
Length = 256
Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 83/258 (32%), Positives = 144/258 (55%), Gaps = 15/258 (5%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIA--VLTAVFGLVTPAYSWGSITSGYLQVLGIA 58
+++ +WA+ LK RT L W+H PV A L +++G V Y S+ + + +
Sbjct: 4 LLRYMWADVLKMKRTPLIWMHAAAPVLCAGFFLLSMYGRVQEPYMLYSV---FFSAIAVL 60
Query: 59 FPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLMEIIAVCLALSVF-- 115
+P +I+I C + +E +AGHFQ +LA K++ F KL+ L+L+ +++ LA+ ++
Sbjct: 61 YPFIISIVCGMSASVEEQAGHFQMMLAVPYSKIISFAGKLLLLLLLNVLSAGLAICLYLA 120
Query: 116 GLLYRSKI-DVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSAL 174
G+ + I D+PYL F G LIA ++ LY++ ++ + G + LG +L++AL
Sbjct: 121 GMKFVLHINDLPYLLFLK-GGAWLIAGSIPLYMMSFFVSIKYGMGPSGLLGGAGLLMAAL 179
Query: 175 LLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQI---LLWLEVAVPLTLMAL 231
+ TGLGD IW+F P AW RL G L +L + K F + + + E+ + +++ L
Sbjct: 180 MNTGLGDTIWRFFPWAWSVRLSG-LAGLLHFDKVKKEFLPYVRYDMRFGEIMLYFSIVIL 238
Query: 232 ILS-IIWFDRWQGRSNEE 248
L+ + W RW+GR + E
Sbjct: 239 CLAGLYWCRRWEGRRSYE 256
>gi|145955085|ref|ZP_01804089.1| hypothetical protein CdifQ_04001496 [Clostridium difficile
QCD-32g58]
Length = 223
Score = 88.6 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 50 GYLQVLGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLMEIIAV 108
YLQV+ IAFPL+ + CS VE E AG+++ +L S K L I K + L+ + +A
Sbjct: 23 AYLQVIAIAFPLLSGVVCSMFVEQEYYAGNYKHMLTTSNPKYLTLISKYIILVCLGFVAT 82
Query: 109 CLALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFE 168
+ SV G + +FY + L+LI + Y+LHL ++ F G +IG+GI E
Sbjct: 83 LV--SVLGFKFGISKAYFTSSFYMISILILIGCNLFEYILHLFLSLRFGKGTSIGVGIVE 140
Query: 169 VLVSALLLTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVP--- 225
+L+SALLLTGLG IWQ+ P AW R + + I + I + +
Sbjct: 141 MLLSALLLTGLGSGIWQYFPCAWGVRFITIWSSFSSSKTVEYIKVESIKAYQSTGLMCGF 200
Query: 226 LTLMALILSIIWFDRWQGRSNEE 248
+T++A ++ IWF +W+G+ +EE
Sbjct: 201 VTILAFVILCIWFSKWEGKKSEE 223
>gi|154503428|ref|ZP_02040488.1| hypothetical protein RUMGNA_01252 [Ruminococcus gnavus ATCC 29149]
gi|153796095|gb|EDN78515.1| hypothetical protein RUMGNA_01252 [Ruminococcus gnavus ATCC 29149]
Length = 250
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 14/249 (5%)
Query: 7 AEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFPLVIAIT 66
+EFLK T++ WIH+ +PV A L ++G V W S+ Y + L I +P V AI
Sbjct: 3 SEFLKLKGTWIFWIHLGVPVAGAGLFLLYG-VAAKREWQSVLEFYAETLAIVYPSVSAII 61
Query: 67 CSKAVELEAEAGHFQTVLANSQ-RKVLYFIKLVNLMLMEIIAVCLALSVFGLLYRSKIDV 125
C ++V E +AG+FQ +L S R K++ L ++ + A LA +FG+
Sbjct: 62 CMQSVMQELKAGNFQNLLCVSTLRWSAVLRKILTLWILGLAASLLAFLLFGMGVWGTKAA 121
Query: 126 PYLAFYGY--AGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLGDNI 183
L+ Y GL+L + +YLLH +A F SGA + G+ + L++ALL TGLGD +
Sbjct: 122 WNLSVKEYLICGLILWITQAGIYLLHFFLAMRFGSGACLAAGVTQSLIAALLFTGLGDGL 181
Query: 184 WQFVPAAWPARLMGTLFEMLQYPDQKPIF-------AQQILLWLEVAVPLTLMALILSII 236
W + P W L L +++ + +F +QI + V +T+ LIL I
Sbjct: 182 WMWFPCGWSGHL---LLYYVKWKTESEVFKMAGEMLKEQIRTGVLSMVGMTITGLILWCI 238
Query: 237 WFDRWQGRS 245
W +S
Sbjct: 239 WIQHHDRKS 247
>gi|56418845|ref|YP_146163.1| lantibiotic ABC transporter (permease) [Geobacillus kaustophilus
HTA426]
gi|56378687|dbj|BAD74595.1| lantibiotic ABC transporter (permease) [Geobacillus kaustophilus
HTA426]
Length = 262
Score = 87.8 bits (216), Expect = 6e-16, Method: Composition-based stats.
Identities = 75/261 (28%), Positives = 133/261 (50%), Gaps = 16/261 (6%)
Query: 2 VKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVF--GLVTPAYSWGSITSGYLQVLGIAF 59
++L+ +E++K RT + + +I P+ ++ + T + I G+ +V+ ++
Sbjct: 4 LRLLSSEWIKTKRTAIRMMVIITPIIYSLFMVWYFSHYRTSTFWQMKIYQGFFEVMAVSL 63
Query: 60 PLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLMEIIAVCLA--LSVFG 116
P++I++ E +AG F +L KV +++ KL L+ + + LA L +FG
Sbjct: 64 PIIISLLTGLMSYQEEKAGSFMNILTGPVSKVQWYVGKLTLLIFIACADILLATILMLFG 123
Query: 117 LLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALL- 175
+ Y K+ + + +L I ++IL+ LHL I+F F GA+I +G L+SAL+
Sbjct: 124 MKYVLKVAHIHYQLFLQGAMLSIVGSLILFSLHLFISFAFGMGASIAVGSGGFLISALIG 183
Query: 176 LTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQ------ILLWLEVAVPLT-- 227
T LGD++W ++P AW RL + F +L P+ K Q + LW +A L
Sbjct: 184 ATSLGDHVWSYIPWAWAVRL--SQFPILMMPEVKQTLGAQLLSSFSLSLWEGIAYALLSF 241
Query: 228 LMALILSIIWFDRWQGRSNEE 248
++ I+ IWF RW+G E
Sbjct: 242 IIVTIIGSIWFHRWEGNQPHE 262
>gi|153853494|ref|ZP_01994874.1| hypothetical protein DORLON_00863 [Dorea longicatena DSM 13814]
gi|153856100|ref|ZP_01996964.1| hypothetical protein DORLON_02994 [Dorea longicatena DSM 13814]
gi|149751717|gb|EDM61648.1| hypothetical protein DORLON_02994 [Dorea longicatena DSM 13814]
gi|149753649|gb|EDM63580.1| hypothetical protein DORLON_00863 [Dorea longicatena DSM 13814]
Length = 246
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 7 AEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFPLVIAIT 66
A+ K T + H+++P+ +V+ ++ +P + + Y Q +G P++I I
Sbjct: 8 ADLRKMKGTSVILAHLLIPIITSVIFLIYYFFSPWNENMKVIAFY-QAIGAGLPVLIGIF 66
Query: 67 CSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLYR--SKID 124
+ +E E AG FQ +L+ + + KL+ L+++ + ++ L +FG+ + + D
Sbjct: 67 TASVMEQEQNAGDFQNLLSLPDKPAAFLSKLLMLLVLCLCSILLTAIIFGIGFGRIASSD 126
Query: 125 VPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLGDNIW 184
+ + +A LLL S+V LYL L++AF F G +IG GI L+SAL+LTGLGD +W
Sbjct: 127 IEIMKGCIFAALLLWGSSVPLYLWQLILAFQFGKGVSIGAGIISGLISALMLTGLGDYVW 186
Query: 185 QFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEV---AVPLTLMALILSIIWFDRW 241
++V W R+ T Q + + WL + T ++++ W + W
Sbjct: 187 KYVFVCWTGRVPYTYL-------QSVLGETSVGEWLSFIPGCLIFTGISMVYYFWWVNHW 239
Query: 242 QGRSNEE 248
+G E
Sbjct: 240 EGNRISE 246
>gi|138893948|ref|YP_001124401.1| SpaG [Geobacillus thermodenitrificans NG80-2]
gi|134265461|gb|ABO65656.1| SpaG [Geobacillus thermodenitrificans NG80-2]
Length = 204
Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 14/206 (6%)
Query: 55 LGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLMEIIAVCLA-- 111
+ ++ P++I++ E +AG F +L KV +++ KL L+ + + LA
Sbjct: 1 MAVSLPIIISLLTGLMSYQEEKAGSFMNILTGPVSKVQWYVGKLTLLIFIACADILLATI 60
Query: 112 LSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLV 171
L +FG+ Y K+ + + +L I ++IL+ LHL I+F F GA+I +G L+
Sbjct: 61 LMLFGMKYVLKVAHIHYQLFLQGAMLSIVGSLILFSLHLFISFAFGMGASIAVGSGGFLI 120
Query: 172 SALL-LTGLGDNIWQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQIL------LWLEVAV 224
SAL+ T LGD++W ++P AW RL + F +L P+ K Q+L LW +A
Sbjct: 121 SALIGATSLGDHVWSYIPWAWAVRL--SQFPILMMPEVKQALGAQLLNSFSLSLWEGIAY 178
Query: 225 PLT--LMALILSIIWFDRWQGRSNEE 248
L ++ I+ IWF RW+G E
Sbjct: 179 ALLSFIIVTIIGSIWFHRWEGNQPHE 204
>gi|154484427|ref|ZP_02026875.1| hypothetical protein EUBVEN_02140 [Eubacterium ventriosum ATCC
27560]
gi|149734904|gb|EDM50821.1| hypothetical protein EUBVEN_02140 [Eubacterium ventriosum ATCC
27560]
Length = 246
Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 7 AEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFPLVIAIT 66
A+ K T + H+++P+ +V+ ++ +P + + Y Q +G P++I I
Sbjct: 8 ADLRKMKGTSVILAHLLIPIITSVIFLIYYFFSPWNENMKVIAFY-QAIGAGLPVLIGIF 66
Query: 67 CSKAVELEAEAGHFQTVLANSQRKVLYFIKLVNLMLMEIIAVCLALSVFGLLYR--SKID 124
+ +E E AG FQ +L+ + + KL+ L+++ + ++ L +FG+ + + D
Sbjct: 67 TASVMEQEQNAGDFQNLLSLPDKPAAFLSKLLLLLVLCLCSILLTAIIFGIGFGRIASSD 126
Query: 125 VPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLGDNIW 184
+ + +A LLL S+V LYL L++AF F G +IG GI L+SAL+LTGLGD +W
Sbjct: 127 IEIMKGCIFAALLLWGSSVPLYLWQLILAFQFGKGVSIGAGIISGLISALMLTGLGDYVW 186
Query: 185 QFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEV---AVPLTLMALILSIIWFDRW 241
++V W R+ T Q + + WL + T ++++ W + W
Sbjct: 187 KYVFVCWTGRVPYTYL-------QSVLGETSVGEWLSFIPGCLTFTGISMVYYFWWVNHW 239
Query: 242 QGRSNEE 248
+G E
Sbjct: 240 EGNRISE 246
>gi|71903452|ref|YP_280255.1| lantibiotic transport permease protein [Streptococcus pyogenes
MGAS6180]
gi|94988559|ref|YP_596660.1| lantibiotic transport permease protein [Streptococcus pyogenes
MGAS9429]
gi|94992381|ref|YP_600480.1| Lantibiotic transport permease protein [Streptococcus pyogenes
MGAS2096]
gi|71802547|gb|AAX71900.1| lantibiotic transport permease protein [Streptococcus pyogenes
MGAS6180]
gi|94542067|gb|ABF32116.1| lantibiotic transport permease protein [Streptococcus pyogenes
MGAS9429]
gi|94545889|gb|ABF35936.1| Lantibiotic transport permease protein [Streptococcus pyogenes
MGAS2096]
Length = 240
Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 46 SITSGYLQVLGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLME 104
++ Y Q++G+ P V +I C + LE +G ++ +L SQ FI +LV L L
Sbjct: 46 TVLFSYFQIVGVLLPFVASIVCIQLKNLEESSGKYKYLLGYSQSNYKPFIVELVFLWLCY 105
Query: 105 IIAVCLALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGL 164
I + +++++F LL ++ L L+ I + YL++ +I+++F +G +G+
Sbjct: 106 CIVLIISITIFILLLKTIGINVSLRLLILNSLIYIIFAYVTYLINHIISYIFSTGVALGI 165
Query: 165 GIFEVLVSALLLTGLGDNIWQFVPAAWPARLMGTLF 200
+ V+V+A T LGD +W +P AW R+ TL+
Sbjct: 166 SMVGVIVAAFCETSLGDKVWFLIPWAWLLRISDTLY 201
>gi|15675075|ref|NP_269249.1| conserved hypothetical protein - lantibiotics associated
[Streptococcus pyogenes M1 GAS]
gi|71910623|ref|YP_282173.1| lantibiotic transport permease protein [Streptococcus pyogenes
MGAS5005]
gi|13622230|gb|AAK33970.1| conserved hypothetical protein - lantibiotics associated
[Streptococcus pyogenes M1 GAS]
gi|71853405|gb|AAZ51428.1| lantibiotic transport permease protein [Streptococcus pyogenes
MGAS5005]
Length = 240
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 46 SITSGYLQVLGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLME 104
++ Y Q++G+ P V +I C + LE +G ++ +L SQ FI +LV L L
Sbjct: 46 TVLFSYFQIVGVLLPFVASIVCIQLKNLEESSGKYKYLLGYSQSNYKPFIVELVFLWLCY 105
Query: 105 IIAVCLALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGL 164
I + +++++F LL ++ L L+ I + YL++ +I+++F +G +G+
Sbjct: 106 CIVLIISITIFILLLKTIGINVSLRLLILNSLIYIIFAYVTYLINHIISYIFSTGVALGI 165
Query: 165 GIFEVLVSALLLTGLGDNIWQFVPAAWPARLMGTLF 200
+ V+ +A T LGD +W +P AW R+ TL+
Sbjct: 166 SMVGVIAAAFCETSLGDKVWFLIPWAWLLRISDTLY 201
>gi|94990434|ref|YP_598534.1| Lantibiotic transport permease protein [Streptococcus pyogenes
MGAS10270]
gi|94994357|ref|YP_602455.1| Lantibiotic transport permease protein [Streptococcus pyogenes
MGAS10750]
gi|9757555|dbj|BAB08168.1| SrtG [Streptococcus pyogenes]
gi|94543942|gb|ABF33990.1| Lantibiotic transport permease protein [Streptococcus pyogenes
MGAS10270]
gi|94547865|gb|ABF37911.1| Lantibiotic transport permease protein [Streptococcus pyogenes
MGAS10750]
Length = 240
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 46 SITSGYLQVLGIAFPLVIAITCSKAVELEAEAGHFQTVLANSQRKVLYFI-KLVNLMLME 104
++ Y Q++G+ P V +I C + LE +G ++ +L SQ FI +LV L L
Sbjct: 46 TVLFSYFQIVGVLLPFVASIVCIQLKNLEESSGKYKYLLGYSQSNYKPFIVELVFLWLCY 105
Query: 105 IIAVCLALSVFGLLYRSKIDVPYLAFYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGL 164
I + +++++F LL ++ L L+ I + YL++ +I+++F +G +G+
Sbjct: 106 CIVLIISITIFILLLKTIGINVSLRLLILNSLIYIIFAYVTYLINHIISYIFSTGVALGI 165
Query: 165 GIFEVLVSALLLTGLGDNIWQFVPAAWPARLMGTLF 200
+ V+ +A T LGD +W +P AW R+ TL+
Sbjct: 166 SMVGVIAAAFCETSLGDKVWFLIPWAWLLRISDTLY 201
>gi|145955912|ref|ZP_01804912.1| hypothetical protein CdifQ_04000513 [Clostridium difficile
QCD-32g58]
Length = 258
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 19/261 (7%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSIT-SGYLQVLGI-A 58
M+KL+ +E+L+ RT + W+ + +P+ I L VF L T + S G+ V +
Sbjct: 1 MIKLLSSEWLRAKRTAVQWLTLCMPI-IFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFI 59
Query: 59 FPLVIAITCSKAVELEAEAGHFQTVLANSQRKV-LYFIKLVNLMLMEIIAVCLALSVFGL 117
P+ + I V+ E AG+F L +V LY K L L+ + +C ++ L
Sbjct: 60 IPIGVGILAGFIVQEEELAGNFNGFLCVGISRVRLYLGKF--LFLLFCLTICTFIATLIL 117
Query: 118 LYRSKIDVPYLA----FYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSA 173
I VP A F AGL++I T+ L +HL ++F + GA+IG+ I +L++A
Sbjct: 118 CIGMSIAVPSGATIWLFLSAAGLVVIG-TLPLLAIHLWVSFAWGMGASIGISIGGILMAA 176
Query: 174 LL-LTGLGDNIWQFVPAAWPAR---LMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLM 229
+L LT +G+ +W FVP WP + L G F F +++ + + + +
Sbjct: 177 ILGLTSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAI 236
Query: 230 ALIL----SIIWFDRWQGRSN 246
LI+ +IWF W+GR +
Sbjct: 237 GLIIFLIGGVIWFKMWEGRKS 257
>gi|126698057|ref|YP_001086954.1| putative lantibiotic ABC transporter, permease protein [Clostridium
difficile 630]
gi|115249494|emb|CAJ67309.1| putative lantibiotic ABC transporter, permease protein [Clostridium
difficile 630]
Length = 258
Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 19/261 (7%)
Query: 1 MVKLIWAEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSIT-SGYLQVLGI-A 58
M+KL+ +E+L+ RT + W+ + +P+ I L VF L T + S G+ V +
Sbjct: 1 MIKLLSSEWLRAKRTAVQWLTLFMPI-IFSLCVVFYLTTKSGSTQEFAFEGFFTVWTVFI 59
Query: 59 FPLVIAITCSKAVELEAEAGHFQTVLANSQRKV-LYFIKLVNLMLMEIIAVCLALSVFGL 117
P+ + I V+ E AG+F L +V LY K L L+ + +C ++ L
Sbjct: 60 IPIGVGILAGFIVQEEELAGNFNGFLCVGISRVRLYLGKF--LFLLFCLTICTFIATLIL 117
Query: 118 LYRSKIDVPYLA----FYGYAGLLLIASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSA 173
I VP A F AGL++I T+ L +HL ++F + GA+IG+ I +L++A
Sbjct: 118 CIGMSIAVPSGATIWLFLSAAGLVVIG-TLPLLAIHLWVSFAWGMGASIGISIGGILMAA 176
Query: 174 LL-LTGLGDNIWQFVPAAWPAR---LMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLM 229
+L LT +G+ +W FVP WP + L G F F +++ + + + +
Sbjct: 177 ILGLTSVGEKVWAFVPWTWPVKLGMLPGIYFIKEAGTISTEAFYSKVMQTASIELIVVAI 236
Query: 230 ALIL----SIIWFDRWQGRSN 246
LI+ +IWF W+GR +
Sbjct: 237 GLIIFLIGGVIWFKMWEGRKS 257
>gi|86559590|ref|YP_473411.1| permease [Clostridium perfringens CPE str. F4969]
gi|86475862|dbj|BAE79038.1| permease [Clostridium perfringens]
Length = 243
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 7 AEFLKYNRTFLPWIHVILPVGIAVLTAVFGLVTPAYSWGSITSGYLQVLGIAFPLVIAIT 66
+ F+K RT L +H++ P+ I L + ++ Y + + +L + +P+ I I+
Sbjct: 9 SNFIKLKRTSLLLLHLLTPIVITFLFLYYYTIS-GYHIITDVRVFFIILQMCYPIFIGIS 67
Query: 67 CSKAVELEAEAGHFQTVLANSQRKV-LYFIKLVNLMLMEIIAVCLALSVFGLLYRSKIDV 125
S +LE Q L + ++ +Y KL+ ++ + I + L F + +D+
Sbjct: 68 VSAFTQLERNINAIQNTLGLVESRISIYLGKLLFMLFLSAINLILYELCFYIGTNLFLDM 127
Query: 126 PYLAFYGYAGLLLI--ASTVILYLLHLVIAFLFDSGATIGLGIFEVLVSALLLTGLGDNI 183
+ Y G+ LI S + +Y LHL IAF F S ++ LGI +++ T +GD I
Sbjct: 128 NIFSLNLYVGIFLIFLLSNLFIYSLHLSIAFRFGSTVSVLLGIAGTILAGYFQTDIGDKI 187
Query: 184 WQFVPAAWPARLMGTLFEMLQYPDQKPIFAQQILLWLEVAVPLTLMALILSIIWFDRWQG 243
W +P R + P I+ + + LT + LILSI+WF+RW+G
Sbjct: 188 WPIIPWECGIRFLENYLNFSNSP---------IIFGIASMIILTSIILILSILWFNRWEG 238
Query: 244 RSNEE 248
+ +E
Sbjct: 239 KIIQE 243
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.330 0.144 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 856,170,273
Number of Sequences: 5470121
Number of extensions: 32736167
Number of successful extensions: 124842
Number of sequences better than 1.0e-05: 37
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 124730
Number of HSP's gapped (non-prelim): 38
length of query: 248
length of database: 1,894,087,724
effective HSP length: 129
effective length of query: 119
effective length of database: 1,188,442,115
effective search space: 141424611685
effective search space used: 141424611685
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 128 (53.9 bits)