BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMT0268
(223 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148983847|ref|ZP_01817166.1| hypothetical protein CGSSp3... 419 e-116
gi|148988206|ref|ZP_01819669.1| hypothetical protein CGSSp6... 392 e-108
gi|148993995|ref|ZP_01823365.1| threonine dehydratase [Stre... 391 e-107
gi|148996855|ref|ZP_01824573.1| hypothetical protein CGSSp1... 391 e-107
gi|15900371|ref|NP_344975.1| hypothetical protein SP_0454 [... 391 e-107
gi|149012203|ref|ZP_01833312.1| hypothetical protein CGSSp1... 391 e-107
gi|149006410|ref|ZP_01830122.1| hypothetical protein CGSSp1... 389 e-107
gi|15902454|ref|NP_358004.1| hypothetical protein spr0410 [... 387 e-106
gi|116516530|ref|YP_815923.1| hypothetical protein SPD_0414... 387 e-106
gi|149003551|ref|ZP_01828425.1| hypothetical protein CGSSp1... 358 1e-97
gi|111657047|ref|ZP_01407844.1| hypothetical protein SpneT_... 354 2e-96
gi|125718752|ref|YP_001035885.1| hypothetical protein SSA_1... 188 2e-46
gi|76786795|ref|YP_328868.1| hypothetical protein SAK_0195 ... 159 9e-38
gi|22536322|ref|NP_687173.1| hypothetical protein SAG0137 [... 159 9e-38
gi|77411797|ref|ZP_00788132.1| conserved hypothetical prote... 159 9e-38
gi|25010208|ref|NP_734603.1| hypothetical protein gbs0133 [... 159 9e-38
gi|77405105|ref|ZP_00782204.1| conserved hypothetical prote... 158 2e-37
gi|77409049|ref|ZP_00785767.1| conserved hypothetical prote... 156 1e-36
gi|71902897|ref|YP_279700.1| hypothetical membrane spanning... 152 2e-35
gi|94987870|ref|YP_595971.1| hypothetical membrane spanning... 150 4e-35
gi|21909740|ref|NP_664008.1| hypothetical protein SpyM3_020... 150 4e-35
gi|15674456|ref|NP_268630.1| hypothetical protein SPy_0278 ... 150 5e-35
gi|71910051|ref|YP_281601.1| hypothetical membrane spanning... 150 5e-35
gi|94989746|ref|YP_597846.1| hypothetical membrane spanning... 150 5e-35
gi|139473095|ref|YP_001127810.1| hypothetical protein SpyM5... 150 5e-35
gi|50913615|ref|YP_059587.1| Hypothetical membrane spanning... 149 1e-34
gi|157075831|gb|ABV10514.1| conserved hypothetical protein ... 147 4e-34
gi|19745410|ref|NP_606546.1| hypothetical protein spyM18_02... 146 1e-33
gi|94993628|ref|YP_601726.1| hypothetical membrane spanning... 82 2e-14
gi|77414943|ref|ZP_00791041.1| conserved hypothetical prote... 82 2e-14
gi|56808472|ref|ZP_00366214.1| COG4907: Predicted membrane ... 80 1e-13
gi|77414650|ref|ZP_00790787.1| conserved hypothetical prote... 79 1e-13
gi|81428480|ref|YP_395480.1| hypothetical protein LSA0870 [... 60 1e-07
gi|28379366|ref|NP_786258.1| integral membrane protein [Lac... 60 1e-07
>gi|148983847|ref|ZP_01817166.1| hypothetical protein CGSSp3BS71_06934 [Streptococcus pneumoniae
SP3-BS71]
gi|147923994|gb|EDK75106.1| hypothetical protein CGSSp3BS71_06934 [Streptococcus pneumoniae
SP3-BS71]
Length = 629
Score = 419 bits (1077), Expect = e-116, Method: Composition-based stats.
Identities = 200/219 (91%), Positives = 209/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLL+ GLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLMFGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPKVQA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKVQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 219
>gi|148988206|ref|ZP_01819669.1| hypothetical protein CGSSp6BS73_11851 [Streptococcus pneumoniae
SP6-BS73]
gi|147926670|gb|EDK77743.1| hypothetical protein CGSSp6BS73_11851 [Streptococcus pneumoniae
SP6-BS73]
Length = 629
Score = 392 bits (1007), Expect = e-108, Method: Composition-based stats.
Identities = 202/219 (92%), Positives = 210/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPKVQA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKVQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 219
>gi|148993995|ref|ZP_01823365.1| threonine dehydratase [Streptococcus pneumoniae SP9-BS68]
gi|147927584|gb|EDK78611.1| threonine dehydratase [Streptococcus pneumoniae SP9-BS68]
Length = 629
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 202/219 (92%), Positives = 210/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPKVQA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKVQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 219
>gi|148996855|ref|ZP_01824573.1| hypothetical protein CGSSp11BS70_09165 [Streptococcus pneumoniae
SP11-BS70]
gi|147757430|gb|EDK64469.1| hypothetical protein CGSSp11BS70_09165 [Streptococcus pneumoniae
SP11-BS70]
Length = 629
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 202/219 (92%), Positives = 210/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPKVQA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKVQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 219
>gi|15900371|ref|NP_344975.1| hypothetical protein SP_0454 [Streptococcus pneumoniae TIGR4]
gi|14971924|gb|AAK74615.1| hypothetical protein SP_0454 [Streptococcus pneumoniae TIGR4]
Length = 630
Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats.
Identities = 201/219 (91%), Positives = 210/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 2 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 61
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPK+QA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 62 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 121
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 122 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 181
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 182 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 220
>gi|149012203|ref|ZP_01833312.1| hypothetical protein CGSSp19BS75_01868 [Streptococcus pneumoniae
SP19-BS75]
gi|147763805|gb|EDK70739.1| hypothetical protein CGSSp19BS75_01868 [Streptococcus pneumoniae
SP19-BS75]
Length = 629
Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats.
Identities = 201/219 (91%), Positives = 210/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPK+QA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 219
>gi|149006410|ref|ZP_01830122.1| hypothetical protein CGSSp18BS74_03834 [Streptococcus pneumoniae
SP18-BS74]
gi|147762187|gb|EDK69149.1| hypothetical protein CGSSp18BS74_03834 [Streptococcus pneumoniae
SP18-BS74]
Length = 629
Score = 389 bits (999), Expect = e-107, Method: Composition-based stats.
Identities = 201/219 (91%), Positives = 209/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPKVQA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKVQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+EGTI
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFREGTI 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYW RTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWSRTDFASARDQGL 219
>gi|15902454|ref|NP_358004.1| hypothetical protein spr0410 [Streptococcus pneumoniae R6]
gi|15457973|gb|AAK99214.1| Hypothetical protein [Streptococcus pneumoniae R6]
Length = 630
Score = 387 bits (994), Expect = e-106, Method: Composition-based stats.
Identities = 199/219 (90%), Positives = 209/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 2 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 61
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPK+QA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 62 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 121
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+E T+
Sbjct: 122 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV 181
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 182 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 220
>gi|116516530|ref|YP_815923.1| hypothetical protein SPD_0414 [Streptococcus pneumoniae D39]
gi|149023739|ref|ZP_01836219.1| hypothetical protein CGSSp23BS72_07331 [Streptococcus pneumoniae
SP23-BS72]
gi|116077106|gb|ABJ54826.1| membrane protein, putative [Streptococcus pneumoniae D39]
gi|147929676|gb|EDK80668.1| hypothetical protein CGSSp23BS72_07331 [Streptococcus pneumoniae
SP23-BS72]
Length = 629
Score = 387 bits (993), Expect = e-106, Method: Composition-based stats.
Identities = 199/219 (90%), Positives = 209/219 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPK+QA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+E T+
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATDQGL 219
EKSNLDYTIRLDNLP+KRGVELHAYWPRTDFASA DQGL
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWPRTDFASARDQGL 219
>gi|149003551|ref|ZP_01828425.1| hypothetical protein CGSSp14BS69_06507 [Streptococcus pneumoniae
SP14-BS69]
gi|147758487|gb|EDK65486.1| hypothetical protein CGSSp14BS69_06507 [Streptococcus pneumoniae
SP14-BS69]
Length = 209
Score = 358 bits (919), Expect = 1e-97, Method: Composition-based stats.
Identities = 188/207 (90%), Positives = 198/207 (95%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQI 60
MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFR KIVYQFEEDFKGQI
Sbjct: 1 MKKTFFLLVLGLFCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRQKIVYQFEEDFKGQI 60
Query: 61 VGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVEV 120
VGLGRAGKMPSGFDIDPHPK+QA+KNG ELADVTSEV E ADGYTV+VYNPGQEGD VEV
Sbjct: 61 VGLGRAGKMPSGFDIDPHPKIQAAKNGAELADVTSEVTEEADGYTVRVYNPGQEGDIVEV 120
Query: 121 DLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEKLYFHTGKLFKEGTI 180
DLVWNLKNLLFLY+DIAELNWQPLTDSS +I KFEFHVRG+K AEKL+FHTGKLF+E T+
Sbjct: 121 DLVWNLKNLLFLYDDIAELNWQPLTDSSESIEKFEFHVRGDKGAEKLFFHTGKLFRERTV 180
Query: 181 EKSNLDYTIRLDNLPSKRGVELHAYWP 207
EKSNLDYTIRLDNLP+KRGVELHAYWP
Sbjct: 181 EKSNLDYTIRLDNLPAKRGVELHAYWP 207
>gi|111657047|ref|ZP_01407844.1| hypothetical protein SpneT_02001723 [Streptococcus pneumoniae
TIGR4]
Length = 596
Score = 354 bits (909), Expect = 2e-96, Method: Composition-based stats.
Identities = 167/186 (89%), Positives = 177/186 (95%)
Query: 34 LYIHADNTAEFRXKIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADV 93
+YIHADNTAEFR KIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPK+QA+KNG ELADV
Sbjct: 1 MYIHADNTAEFRQKIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPKIQAAKNGAELADV 60
Query: 94 TSEVIEGADGYTVKVYNPGQEGDTVEVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGK 153
TSEV E ADGYTV+VYNPGQEGD VEVDLVWNLKNLLFLY+DIAELNWQPLTDSS +I K
Sbjct: 61 TSEVTEEADGYTVRVYNPGQEGDIVEVDLVWNLKNLLFLYDDIAELNWQPLTDSSESIEK 120
Query: 154 FEFHVRGEKEAEKLYFHTGKLFKEGTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFAS 213
FEFHVRG+K AEKL+FHTGKLF+EGTIEKSNLDYTIRLDNLP+KRGVELHAYWPRTDFAS
Sbjct: 121 FEFHVRGDKGAEKLFFHTGKLFREGTIEKSNLDYTIRLDNLPAKRGVELHAYWPRTDFAS 180
Query: 214 ATDQGL 219
A DQGL
Sbjct: 181 ARDQGL 186
>gi|125718752|ref|YP_001035885.1| hypothetical protein SSA_1960 [Streptococcus sanguinis SK36]
gi|125498669|gb|ABN45335.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
Length = 631
Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 3/211 (1%)
Query: 1 MKKTFFLLVLGLFCL-LPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MK+ F+LL++ CL V A+D+ I SYQGDL + DNTA + K+ Y+F +D+ GQ
Sbjct: 1 MKRYFYLLLVLFSCLCFGRVVSAVDYDIESYQGDLALREDNTATYTEKVTYKFNDDYNGQ 60
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
IV LG AGKMP+GF ID +P V NG+ D+ +V + DGY VK+YN G +GD V
Sbjct: 61 IVSLGSAGKMPNGFAIDGNPTVSVLTNGEPDMDINPQVKDLGDGYEVKIYNSGNDGDRVV 120
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAEK--LYFHTGKLFKE 177
V + W L+NLLFL+ DIAELNW P++D IG+ V G +K L+ H+G +
Sbjct: 121 VTVTWQLRNLLFLHRDIAELNWTPISDWDQGIGEVVLTVSGLSNPDKSELFAHSGYFGTQ 180
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPR 208
++K DY ++L+ + S VELH YW R
Sbjct: 181 PFVDKDGTDYLVKLNGIGSGDNVELHGYWDR 211
>gi|76786795|ref|YP_328868.1| hypothetical protein SAK_0195 [Streptococcus agalactiae A909]
gi|76561852|gb|ABA44436.1| conserved hypothetical protein [Streptococcus agalactiae A909]
Length = 624
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 135/219 (61%), Gaps = 6/219 (2%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 1 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 60
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
V LG AGK+P FDI+ P+V+ S NG + V+ ++ + DGY +KV+N G+ GDTV+
Sbjct: 61 YVTLGTAGKLPDNFDINNKPQVEVSING-KARKVSCQIEDLEDGYRLKVFNDGEAGDTVK 119
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA--EKLYFHTGKLFKE 177
V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+ +L+ H G L
Sbjct: 120 VNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTP 179
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 180 PKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 216
>gi|22536322|ref|NP_687173.1| hypothetical protein SAG0137 [Streptococcus agalactiae 2603V/R]
gi|76798975|ref|ZP_00781175.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|22533145|gb|AAM99045.1|AE014197_13 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
gi|76585670|gb|EAO62228.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
Length = 627
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 136/219 (62%), Gaps = 6/219 (2%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 1 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 60
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
V LG AGK+P FDI+ P+V+ S NG ++ V+ ++ + DGY +KV+N G+ GDTV+
Sbjct: 61 YVTLGTAGKLPDNFDINNKPQVEVSING-KVRKVSYQIEDLEDGYRLKVFNGGEAGDTVK 119
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA--EKLYFHTGKLFKE 177
V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+ +L+ H G L
Sbjct: 120 VNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTP 179
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 180 PKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 216
>gi|77411797|ref|ZP_00788132.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
gi|77162132|gb|EAO73108.1| conserved hypothetical protein [Streptococcus agalactiae CJB111]
Length = 627
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 136/219 (62%), Gaps = 6/219 (2%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 1 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 60
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
V LG AGK+P FDI+ P+V+ S NG ++ V+ ++ + DGY +KV+N G+ GDTV+
Sbjct: 61 YVTLGTAGKLPDNFDINNKPQVEVSING-KVRKVSYQIEDLEDGYRLKVFNGGEAGDTVK 119
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA--EKLYFHTGKLFKE 177
V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+ +L+ H G L
Sbjct: 120 VNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTP 179
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 180 PKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 216
>gi|25010208|ref|NP_734603.1| hypothetical protein gbs0133 [Streptococcus agalactiae NEM316]
gi|23094560|emb|CAD45778.1| unknown [Streptococcus agalactiae NEM316]
Length = 624
Score = 159 bits (403), Expect = 9e-38, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 136/219 (62%), Gaps = 6/219 (2%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 1 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 60
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
V LG AGK+P FDI+ P+V+ S NG ++ V+ ++ + DGY +KV+N G+ GDTV+
Sbjct: 61 YVTLGTAGKLPDNFDINNKPQVEVSING-KVRKVSYQIEDLEDGYRLKVFNGGEAGDTVK 119
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA--EKLYFHTGKLFKE 177
V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+ +L+ H G L
Sbjct: 120 VNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTP 179
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 180 PKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 216
>gi|77405105|ref|ZP_00782204.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
gi|77176248|gb|EAO79018.1| conserved hypothetical protein [Streptococcus agalactiae H36B]
Length = 325
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 135/219 (61%), Gaps = 6/219 (2%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 1 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 60
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
V LG AGK+P FDI+ P+V+ S NG + V+ ++ + DGY +KV+N G+ GDTV+
Sbjct: 61 YVTLGTAGKLPDNFDINNKPQVEVSING-KARKVSCQIEDLEDGYRLKVFNDGEAGDTVK 119
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA--EKLYFHTGKLFKE 177
V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+ +L+ H G L
Sbjct: 120 VNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTP 179
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 180 PKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 216
>gi|77409049|ref|ZP_00785767.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
gi|77172343|gb|EAO75494.1| conserved hypothetical protein [Streptococcus agalactiae COH1]
Length = 629
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 135/219 (61%), Gaps = 6/219 (2%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 3 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 62
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTVE 119
V LG AGK+ FDI+ P+V+ S NG ++ V+ ++ + DGY +KV+N G+ GDTV+
Sbjct: 63 YVTLGTAGKLSDNFDINNKPQVEVSING-KVRKVSYQIEDLEDGYRLKVFNGGEAGDTVK 121
Query: 120 VDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA--EKLYFHTGKLFKE 177
V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+ +L+ H G L
Sbjct: 122 VNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVALSRLWGHLGYLKTP 181
Query: 178 GTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 182 PKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 218
>gi|71902897|ref|YP_279700.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS6180]
gi|71801992|gb|AAX71345.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS6180]
Length = 323
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 124/213 (58%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGRAG +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRAGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|94987870|ref|YP_595971.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS9429]
gi|94991753|ref|YP_599852.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS2096]
gi|94541378|gb|ABF31427.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS9429]
gi|94545261|gb|ABF35308.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS2096]
Length = 641
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGR G +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRTGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|21909740|ref|NP_664008.1| hypothetical protein SpyM3_0204 [Streptococcus pyogenes MGAS315]
gi|28895122|ref|NP_801472.1| hypothetical protein SPs0210 [Streptococcus pyogenes SSI-1]
gi|21903924|gb|AAM78811.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810367|dbj|BAC63305.1| hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 641
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGR G +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRTGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|15674456|ref|NP_268630.1| hypothetical protein SPy_0278 [Streptococcus pyogenes M1 GAS]
gi|13621553|gb|AAK33351.1| hypothetical protein SPy_0278 [Streptococcus pyogenes M1 GAS]
Length = 632
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGR G +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRTGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|71910051|ref|YP_281601.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS5005]
gi|71852833|gb|AAZ50856.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS5005]
Length = 632
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGR G +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRTGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|94989746|ref|YP_597846.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10270]
gi|94543254|gb|ABF33302.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10270]
Length = 641
Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGR G +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRTGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|139473095|ref|YP_001127810.1| hypothetical protein SpyM50216 [Streptococcus pyogenes str.
Manfredo]
gi|134271341|emb|CAM29559.1| putative membrane protein [Streptococcus pyogenes str. Manfredo]
Length = 641
Score = 150 bits (379), Expect = 5e-35, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 123/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGR G +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRTGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V ++W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|50913615|ref|YP_059587.1| Hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10394]
gi|50902689|gb|AAT86404.1| Hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10394]
Length = 641
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LV F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVF-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGRAG +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRAGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V + W L +LL Y+D+AELNW P++D + K V + + L+ H G K
Sbjct: 119 DVKVTWQLHHLLTAYQDVAELNWTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|157075831|gb|ABV10514.1| conserved hypothetical protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 639
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 83/225 (36%), Positives = 125/225 (55%), Gaps = 7/225 (3%)
Query: 1 MKKTFFLLVLGLFCLLPLSVF-----AIDFKINSYQGDLYIHADNTAEFRXKIVYQFEED 55
MKK ++ LF + L F ID +I Y G L IH DNTA F ++ Y +++
Sbjct: 1 MKKRLLFIISILFLVTLLIPFRGKAAEIDSRIEQYNGRLEIHQDNTATFIEEVTYVYDDP 60
Query: 56 FKGQIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEG 115
+ GQ + LG+AGK+PS F+I+ P V+ NG + E + DG +K+YN G G
Sbjct: 61 YNGQYITLGQAGKVPSNFEIESKPLVEIETNGKTKEPQSIEEVPLEDGKKLKIYNSGNSG 120
Query: 116 DTVEVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE-KLYFHTGKL 174
D V++ + W LKNLLFLY D+AELNW P++D + F V + ++ +L HTG
Sbjct: 121 DRVKIKITWQLKNLLFLYPDVAELNWIPISDWEVGMDHVSFVVTSQPDSSARLIAHTGFF 180
Query: 175 FKEGTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFA-SATDQG 218
K+ +++ + + LD+L +K ELH W R+ F+ S T+ G
Sbjct: 181 KKDPEVKRIENGFEVTLDSLGAKHHFELHGIWDRSLFSQSLTNDG 225
>gi|19745410|ref|NP_606546.1| hypothetical protein spyM18_0265 [Streptococcus pyogenes MGAS8232]
gi|19747520|gb|AAL97045.1| hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 641
Score = 146 bits (368), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 9/213 (4%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYTVKVYNPGQEGDTV 118
Q + LGRAG +P+GF ID PKV+ +NG ++ V+ E + DGY +K+YN GQ GD V
Sbjct: 60 QYISLGRAGHLPAGFAIDQKPKVEVYQNGQQVP-VSQEFSDLGDGYRLKLYNAGQAGDKV 118
Query: 119 EVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEAE--KLYFHTGKLFK 176
+V + W L +LL Y+D+AELN P++D + K V + + L+ H G K
Sbjct: 119 DVKVTWQLHHLLTAYQDVAELNLTPISDWDKTLEKVSLTVTTPTDIQDSNLWAHRGYYQK 178
Query: 177 EGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
+ + K N Y I N+ + +ELHAYW +
Sbjct: 179 KPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 209
>gi|94993628|ref|YP_601726.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10750]
gi|94547136|gb|ABF37182.1| hypothetical membrane spanning protein [Streptococcus pyogenes
MGAS10750]
Length = 105
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MKKTFFLLVLGLFCLLPLSVFA--IDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKG 58
MKK LVL F LL + + A +D+ I +Y+G L + +NTA F K+ YQF+ + G
Sbjct: 1 MKKILMTLVL-CFSLLGIRIKAADVDYSITNYEGQLLLSKENTARFEQKVTYQFDTSYNG 59
Query: 59 QIVGLGRAGKMPSGFDIDPHPKVQASKNGDEL 90
Q + LGRAG +P+GF ID PKV+ +NG ++
Sbjct: 60 QYISLGRAGHLPAGFAIDQKPKVEVYQNGQQV 91
>gi|77414943|ref|ZP_00791041.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gi|77159011|gb|EAO70224.1| conserved hypothetical protein [Streptococcus agalactiae 515]
Length = 105
Score = 82.0 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 1 MKKTFFLLVLGL-FCLLPLSVFAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQ 59
MKK F + L L F ++ + +D+ I Y+G+L IH DN+A+F K+ YQF+ + GQ
Sbjct: 3 MKKCFLAICLALSFFMVSVQADEVDYNIPHYEGNLTIHNDNSADFTEKVTYQFDSSYNGQ 62
Query: 60 IVGLGRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADG 103
V LG AGK+P FDI+ P+V+ S NG ++ V+ ++ + DG
Sbjct: 63 YVTLGTAGKLPDXFDINNKPQVEVSING-KVRKVSYQIEDLEDG 105
>gi|56808472|ref|ZP_00366214.1| COG4907: Predicted membrane protein [Streptococcus pyogenes M49
591]
Length = 553
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 93 VTSEVIEGADGYTVKVYNPGQEGDTVEVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIG 152
V+ E + DGY +K+YN GQ GD V+V ++W L +LL Y+D+AELNW P++D +
Sbjct: 5 VSQEFSDLGDGYRLKLYNAGQAGDKVDVKVIWQLHHLLTAYQDVAELNWTPISDWDKTLE 64
Query: 153 KFEFHVRGEKEAE--KLYFHTGKLFKEGTIEKS-NLDYTIRLDNLPSKRGVELHAYWPR 208
K V + + L+ H G K+ + K N Y I N+ + +ELHAYW +
Sbjct: 65 KVSLTVTTPTDIQDSNLWAHRGYYQKKPQVLKEGNSRYQINAKNVSGQ--LELHAYWDK 121
>gi|77414650|ref|ZP_00790787.1| conserved hypothetical protein [Streptococcus agalactiae 515]
gi|77159292|gb|EAO70466.1| conserved hypothetical protein [Streptococcus agalactiae 515]
Length = 523
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 106 VKVYNPGQEGDTVEVDLVWNLKNLLFLYEDIAELNWQPLTDSSGAIGKFEFHVRGEKEA- 164
+KV+N G+ GDTV+V++ W LKN+LF+++D+ ELNW P++D + K +F + +K+
Sbjct: 5 LKVFNGGEAGDTVKVNVQWKLKNVLFMHKDVGELNWIPISDWDKTLEKVDFWISTDKKVA 64
Query: 165 -EKLYFHTGKLFKEGTIEKSNLDYTIRLDNLPSKRGVELHAYWPRTDFASATD 216
+L+ H G L I ++N Y + N+ +KR +E H YW R+ F T+
Sbjct: 65 LSRLWGHLGYLKTPPKIRQNNNRYHLTAFNV-NKR-LEFHGYWDRSYFNLPTN 115
>gi|81428480|ref|YP_395480.1| hypothetical protein LSA0870 [Lactobacillus sakei subsp. sakei 23K]
gi|78610122|emb|CAI55171.1| Hypothetical protein [Lactobacillus sakei subsp. sakei 23K]
Length = 601
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 25 FKINSYQGDLYIHADNTAEFRXKIVYQFEEDFKGQIVGLGRAGKMPSGFDIDPHPKVQ-- 82
+ I+ Y + + D +A+ K+ + ++D G + L + + G +P VQ
Sbjct: 12 YDISRYHVQVNVQKDGSAQVEQKMNFDIQDDING--IYLNQNLQTTVG---EPKKLVQPQ 66
Query: 83 ASKNGDELADVTSE------VIEGADGYTVKVYNPGQEGDTVEVDLVWNLKNLLFLYEDI 136
+ NG SE + Y K+Y P E D + V L + L+NL+ Y+D
Sbjct: 67 VAVNGRTFQASQSETAGTYSLTNDNQKYRFKLYQPATEDDRLAVTLKYQLQNLIINYQDT 126
Query: 137 AELNWQPLTDS-SGAIGKFEFHVR---GEKEAEKLYFHTGKLFKEGTIEKSNLDYTIRLD 192
AELNW+ + D+ ++G + ++ K++E + G L + ++ + TI++
Sbjct: 127 AELNWKVIGDAWDSSLGDVQVTIQLPTTLKQSELKSWTHGDLDGQQIVDPAKGRVTIKMT 186
Query: 193 NLPSKRGVELHAYWPRT 209
N P+ + VE H +P +
Sbjct: 187 NNPANQFVESHLIFPTS 203
>gi|28379366|ref|NP_786258.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28272205|emb|CAD65113.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 641
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 36/230 (15%)
Query: 2 KKTFFLLVLGL---FCL-LPLSV-FAIDFKINSYQGDLYIHADNTAEFRXKIVYQFEEDF 56
++ +L VLGL FC L++ A D+ I+ YQ ++ I D +A + YQF++D+
Sbjct: 36 RRLSWLSVLGLLAGFCWWFSLAMRAAADYDIDQYQVNVAIQRDGSANVTQAMTYQFDDDY 95
Query: 57 KG-----QIVGL------GRAGKMPSGFDIDPHPKVQASKNGDELADVTSEVIEGADGYT 105
G + G+ G ++ G + P + N T ++ + AD
Sbjct: 96 HGVFNVQDLKGIQGAQLEGVTTQLNGGTTVTAAPSETGANN-------TYQLTQNADRMR 148
Query: 106 VKVYNPGQEGDTVEVDLVWNLKNLLFLYEDIAELNWQ--------PLTDSSGAIGKFEFH 157
VK+Y QE D + V + LK ++ Y D AELNW+ PL + K
Sbjct: 149 VKLYRQVQEDDKLRVVYRYRLKGVVTNYADTAELNWKVIGSGWDVPLNNV-----KIVIQ 203
Query: 158 VRGEKEAEKLYFHTGKLFKEGTIEKSNLDYTIRLDNLPSKRGVELHAYWP 207
+ + + + G L + +E++ T+ L + P+ + VE H +P
Sbjct: 204 LPAKNVSALQAWTHGPLSGQTKVERAAGRVTMTLGHNPANQFVESHLLFP 253
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.319 0.139 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 853,218,763
Number of Sequences: 5470121
Number of extensions: 37131907
Number of successful extensions: 77025
Number of sequences better than 1.0e-05: 36
Number of HSP's better than 0.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 76954
Number of HSP's gapped (non-prelim): 36
length of query: 223
length of database: 1,894,087,724
effective HSP length: 128
effective length of query: 95
effective length of database: 1,193,912,236
effective search space: 113421662420
effective search space used: 113421662420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)