proteins
| 56 proteins |
R | COG2249 | Putative NADPH-quinone reductase (modulator of drug activity B) | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Vibrio cholerae (Vibrionales | Gammaproteobacteria) | ||||
| VC2607 | ||||
196 letters 0
0 1057 = |||VC2607 (196) = -6
-8 573 = ||YPO0190 (183) = -6
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= VC2607
(196 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
VC2607 411 e-115
YPO0190 225 5e-59
yheR 216 2e-56
ZyheR 216 2e-56
ECs4202 216 2e-56
STM3458 213 3e-55
CC0205 139 3e-33
RSc3097 135 6e-32
yabF 124 1e-28
ZyabF 123 2e-28
ECs0049 123 2e-28
BS_ywrO 121 8e-28
BS_ydeQ 121 8e-28
STM0085 121 1e-27
BS_yrkL 118 9e-27
SMc03185 71 1e-12
BH2748 54 3e-07
BH3885 52 1e-06
AF1436 37 0.027
PAE3530 31 1.5
AGl2319 30 4.3
AF1896 29 7.3
# >VC2607
# Length = 196
#
# Score = 411 bits (1057), Expect = e-115
# Identities = 196/196 (100%), Positives = 196/196 (100%)
#
# Query: 1 MRNLVNREQTKAKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHA 60
# MRNLVNREQTKAKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHA
# Sbjct: 1 MRNLVNREQTKAKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHA 60
#
# Query: 61 EQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAFGKQSELKGKLWRSVITTGGN 120
# EQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAFGKQSELKGKLWRSVITTGGN
# Sbjct: 61 EQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAFGKQSELKGKLWRSVITTGGN 120
#
# Query: 121 HTAYDQRGYNRYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL 180
# HTAYDQRGYNRYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL
# Sbjct: 121 HTAYDQRGYNRYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL 180
#
# Query: 181 QEIAHWQGEPYDATDQ 196
# QEIAHWQGEPYDATDQ
# Sbjct: 181 QEIAHWQGEPYDATDQ 196
#
#
# >YPO0190
# Length = 183
#
# Score = 225 bits (573), Expect = 5e-59
# Identities = 102/170 (60%), Positives = 130/170 (76%), Gaps = 1/170 (0%)
#
# Query: 13 KVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLV 72
# KVL++YAHP+ Q SVAN+V+++ + LEHV++ DLYA YP+FFID+H EQQ LR+H V+V
# Sbjct: 7 KVLLLYAHPESQDSVANRVLLQPVQQLEHVTVHDLYAHYPDFFIDIHHEQQLLRDHQVIV 66
#
# Query: 73 LQHPLYMYSCPALLKEWIDRVLSKGFAFGKQSE-LKGKLWRSVITTGGNHTAYDQRGYNR 131
# QHPLY YSCPALLKEW+DRVL++GFA G L GK WRSVITTG Y GYNR
# Sbjct: 67 FQHPLYTYSCPALLKEWLDRVLARGFANGVGGHALTGKHWRSVITTGEQEGTYRIGGYNR 126
#
# Query: 132 YPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQ 181
# YP+ +IL+PFEL+AA+C MHWI P+++YW+R + A HA+ Y QWLQ
# Sbjct: 127 YPMEDILRPFELTAAMCHMHWINPMIIYWARRQKPETLASHAQAYVQWLQ 176
#
#
# >yheR
# Length = 184
#
# Score = 216 bits (550), Expect = 2e-56
# Identities = 98/170 (57%), Positives = 130/170 (75%), Gaps = 1/170 (0%)
#
# Query: 12 AKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVL 71
# AKVL++YAHP+ Q SVAN+V+++ L +V++ DLYA YP+FFID+ EQ LREH+V+
# Sbjct: 6 AKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVI 65
#
# Query: 72 VLQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYN 130
# V QHPLY YSCPALLKEW+DRVLS+GFA G ++L GK WRSVITTG +AY N
# Sbjct: 66 VFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALN 125
#
# Query: 131 RYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL 180
# RYP++++L+PFEL+A +C+MHW+ P+++YW+R S QE A HA Y WL
# Sbjct: 126 RYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWL 175
#
#
# >ZyheR
# Length = 184
#
# Score = 216 bits (550), Expect = 2e-56
# Identities = 98/170 (57%), Positives = 130/170 (75%), Gaps = 1/170 (0%)
#
# Query: 12 AKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVL 71
# AKVL++YAHP+ Q SVAN+V+++ L +V++ DLYA YP+FFID+ EQ LREH+V+
# Sbjct: 6 AKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVI 65
#
# Query: 72 VLQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYN 130
# V QHPLY YSCPALLKEW+DRVLS+GFA G ++L GK WRSVITTG +AY N
# Sbjct: 66 VFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALN 125
#
# Query: 131 RYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL 180
# RYP++++L+PFEL+A +C+MHW+ P+++YW+R S QE A HA Y WL
# Sbjct: 126 RYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARXYGDWL 175
#
#
# >ECs4202
# Length = 184
#
# Score = 216 bits (550), Expect = 2e-56
# Identities = 98/170 (57%), Positives = 130/170 (75%), Gaps = 1/170 (0%)
#
# Query: 12 AKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVL 71
# AKVL++YAHP+ Q SVAN+V+++ L +V++ DLYA YP+FFID+ EQ LREH+V+
# Sbjct: 6 AKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVI 65
#
# Query: 72 VLQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYN 130
# V QHPLY YSCPALLKEW+DRVLS+GFA G ++L GK WRSVITTG +AY N
# Sbjct: 66 VFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALN 125
#
# Query: 131 RYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL 180
# RYP++++L+PFEL+A +C+MHW+ P+++YW+R S QE A HA Y WL
# Sbjct: 126 RYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWL 175
#
#
# >STM3458
# Length = 183
#
# Score = 213 bits (541), Expect = 3e-55
# Identities = 98/170 (57%), Positives = 130/170 (75%), Gaps = 1/170 (0%)
#
# Query: 12 AKVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVL 71
# AKVL++YAHP+ Q SVAN+V+++ +V++ DLYA YP+FFID EQ LREHDV+
# Sbjct: 5 AKVLLLYAHPESQDSVANRVLLKPAIQHNNVTVHDLYARYPDFFIDTPYEQALLREHDVI 64
#
# Query: 72 VLQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYN 130
# V QHPLY YSCPALLKEW+DRVLS+GFA G ++L GK WRSVITTG +AY N
# Sbjct: 65 VFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLVGKYWRSVITTGEPESAYRYDALN 124
#
# Query: 131 RYPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL 180
# RYP++++L+PFEL+AA+C+MHW+ P+++YW+R S Q A HA+ Y +WL
# Sbjct: 125 RYPMSDVLRPFELTAAMCRMHWMPPIIVYWARRQSPQTLASHAKAYGEWL 174
#
#
# >CC0205
# Length = 185
#
# Score = 139 bits (351), Expect = 3e-33
# Identities = 75/165 (45%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
#
# Query: 14 VLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLVL 73
# VL+V AHP + S AN+ + + L V+ DLY YP+F ID+ +EQ L HDV+ L
# Sbjct: 8 VLLVLAHPALERSRANRALAKAAKGLSGVTFKDLYEIYPDFVIDIESEQAALSAHDVVAL 67
#
# Query: 74 QHPLYMYSCPALLKEWIDRVLSKGFAFGKQSE-LKGKLWRSVITTGGNHTAYDQRGYNRY 132
# Q PLY YS PAL+KEW+D V GFA+G+ E LKGK TTG AY GYNR+
# Sbjct: 68 QFPLYWYSTPALMKEWLDLVWLHGFAYGEGGEALKGKKLFVACTTGAGAKAYHAHGYNRF 127
#
# Query: 133 PLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYR 177
# ++E L+P E +A LC M W P V++ + D AERYR
# Sbjct: 128 SMDEFLRPLEQTAHLCGMVWEAPFVVHGAAVKDDAALKAEAERYR 172
#
#
# >RSc3097
# Length = 182
#
# Score = 135 bits (340), Expect = 6e-32
# Identities = 73/170 (42%), Positives = 105/170 (60%), Gaps = 1/170 (0%)
#
# Query: 13 KVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLV 72
# ++LV+YAHP P+ S AN+ + +A L V++ DLY YP F IDV AEQQ L D++V
# Sbjct: 5 RILVIYAHPAPRRSRANKPLARMLAGLPGVALHDLYWHYPEFDIDVRAEQQALEAADLVV 64
#
# Query: 73 LQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNR 131
# LQ P+ Y+ P+LLKEW+D VL G+A+G + L+GK + TTGG AY + G +
# Sbjct: 65 LQFPVQWYATPSLLKEWLDVVLEMGWAYGPGGTALRGKHMLVLATTGGRAHAYSRDGIHG 124
#
# Query: 132 YPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQ 181
# + + L P + +AALC MHW+ P VL+ + + S + H E+ R LQ
# Sbjct: 125 HAFDLFLLPLQQTAALCGMHWLPPHVLHDADDASPEVLDAHLEQVRASLQ 174
#
#
# >yabF
# Length = 176
#
# Score = 124 bits (311), Expect = 1e-28
# Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 6/175 (3%)
#
# Query: 14 VLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLVL 73
# +L++YAHP P HS AN+ M+E+ LE V I LY YP+F ID+ AEQ+ L D++V
# Sbjct: 2 ILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVW 61
#
# Query: 74 QHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNRY 132
# QHP+ YS P LLK WID+V S G+A+G + L GK +TTGG + ++ + +
# Sbjct: 62 QHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGF 121
#
# Query: 133 PLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQEIAHWQ 187
# + + QP + +A C ++W+ P ++ + D+ A Y+Q L E WQ
# Sbjct: 122 DV--LSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLE---WQ 171
#
#
# >ZyabF
# Length = 176
#
# Score = 123 bits (309), Expect = 2e-28
# Identities = 67/175 (38%), Positives = 100/175 (56%), Gaps = 6/175 (3%)
#
# Query: 14 VLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLVL 73
# +L++YAHP P HS AN+ M E+ LE V I LY YP+F ID+ AEQ+ L D++V
# Sbjct: 2 ILIIYAHPYPHHSHANKRMFEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVW 61
#
# Query: 74 QHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNRY 132
# QHP+ YS P LLK WID+V S G+A+G + L GK +TTGG + ++ + +
# Sbjct: 62 QHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGF 121
#
# Query: 133 PLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQEIAHWQ 187
# + + QP + +A C ++W+ P ++ + D+ A Y+Q L E WQ
# Sbjct: 122 DV--LSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLE---WQ 171
#
#
# >ECs0049
# Length = 176
#
# Score = 123 bits (309), Expect = 2e-28
# Identities = 67/175 (38%), Positives = 100/175 (56%), Gaps = 6/175 (3%)
#
# Query: 14 VLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLVL 73
# +L++YAHP P HS AN+ M E+ LE V I LY YP+F ID+ AEQ+ L D++V
# Sbjct: 2 ILIIYAHPYPHHSHANKRMFEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVW 61
#
# Query: 74 QHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNRY 132
# QHP+ YS P LLK WID+V S G+A+G + L GK +TTGG + ++ + +
# Sbjct: 62 QHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGF 121
#
# Query: 133 PLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQEIAHWQ 187
# + + QP + +A C ++W+ P ++ + D+ A Y+Q L E WQ
# Sbjct: 122 DV--LSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLE---WQ 171
#
#
# >BS_ywrO
# Length = 175
#
# Score = 121 bits (304), Expect = 8e-28
# Identities = 62/171 (36%), Positives = 102/171 (59%), Gaps = 1/171 (0%)
#
# Query: 13 KVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLV 72
# K+LV+ HP + SV N+ E+++ +++++ DLY YP+ IDV EQQ E+D +V
# Sbjct: 2 KILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIV 61
#
# Query: 73 LQHPLYMYSCPALLKEWIDRVLSKGFAFGKQ-SELKGKLWRSVITTGGNHTAYDQRGYNR 131
# Q PLY YS P LLK+W D VL+ G+AFG + + L GK ++TG Y G N
# Sbjct: 62 FQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANH 121
#
# Query: 132 YPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQE 182
# Y ++E+L+PF+ ++ L M ++ P V Y + ++ + A+R +++Q+
# Sbjct: 122 YSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQ 172
#
#
# >BS_ydeQ
# Length = 197
#
# Score = 121 bits (304), Expect = 8e-28
# Identities = 67/172 (38%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
#
# Query: 13 KVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLV 72
# K LV+ HP+ + S N+ E + V++ DLY Y + IDV EQQ+L HD +V
# Sbjct: 5 KTLVLVVHPNIESSRINKKWKEAVLSEPDVTVHDLYEKYRDQPIDVEFEQQQLLAHDRIV 64
#
# Query: 73 LQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNR 131
# Q PLY YS P LLK+W D V + G+A G ++LKGK W + ++ G +Y GYN
# Sbjct: 65 FQFPLYWYSSPPLLKQWFDEVFTFGWAHGPGGNKLKGKEWVTAMSIGSPEHSYQAGGYNL 124
#
# Query: 132 YPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQEI 183
# + ++E+ +PF+ SA L M ++ Y + ISDQE A+ A RY + + I
# Sbjct: 125 FSISELTKPFQASAHLVGMTYLPSFAEYRANTISDQEIAESANRYVKHITNI 176
#
#
# >STM0085
# Length = 176
#
# Score = 121 bits (303), Expect = 1e-27
# Identities = 68/177 (38%), Positives = 101/177 (56%), Gaps = 8/177 (4%)
#
# Query: 14 VLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLVL 73
# +L++YAHP P HS AN+ M+E+ LE+V I LY YP+F IDV AEQ+ L ++V
# Sbjct: 2 ILIIYAHPYPHHSHANKRMLEQAGTLENVEIRSLYHLYPDFNIDVAAEQEALSRASLIVW 61
#
# Query: 74 QHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNRY 132
# QHP+ YS P LLK W+D+VL+ G+A+G + L GK +TTGG + +
# Sbjct: 62 QHPMQWYSVPPLLKLWMDKVLTHGWAYGHGGTALHGKHLLWAVTTGGGENHF---AIGSH 118
#
# Query: 133 PLNEIL-QPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWL---QEIAH 185
# P ++L QP + +A C + W+ P ++ + D A +Y+Q L QE+ H
# Sbjct: 119 PGFDVLSQPLQATALYCGLKWLSPFAMHCTFICDDDTLQAQARQYKQRLLAWQEVNH 175
#
#
# >BS_yrkL
# Length = 174
#
# Score = 118 bits (295), Expect = 9e-27
# Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 1/170 (0%)
#
# Query: 13 KVLVVYAHPDPQHSVANQVMMEKIADLEHVSIIDLYATYPNFFIDVHAEQQRLREHDVLV 72
# K LV+ HP+ + SV N+ M ++ + +++ DLY YPNF IDV EQQ L +H+ +V
# Sbjct: 2 KTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERIV 61
#
# Query: 73 LQHPLYMYSCPALLKEWIDRVLSKGFAFGK-QSELKGKLWRSVITTGGNHTAYDQRGYNR 131
# Q P+Y YS PALLK+W D VL+ G+A+G ++L GK I++G + Y G
# Sbjct: 62 FQFPMYWYSSPALLKQWEDDVLTHGWAYGTGGTKLHGKELLLAISSGAQESDYQAGGEYN 121
#
# Query: 132 YPLNEILQPFELSAALCQMHWIEPLVLYWSRNISDQERAQHAERYRQWLQ 181
# ++E+++PF+++A M ++ Y + ++S ++ AER +L+
# Sbjct: 122 ITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSAERLVDYLK 171
#
#
# >SMc03185
# Length = 270
#
# Score = 71.2 bits (173), Expect = 1e-12
# Identities = 62/227 (27%), Positives = 100/227 (43%), Gaps = 49/227 (21%)
#
# Query: 13 KVLVVYAHPDPQ--HSVANQVMMEKIADLEH-VSIIDLYAT-------YPNFFI------ 56
# K+L+V+AHP+ + + V +E++ H V + DLYA + +F +
# Sbjct: 2 KILLVFAHPESRSLNGALRDVAIEELTAQGHEVRVSDLYADGWKSEVGHADFPLLPPDAR 61
#
# Query: 57 ------------------DVHAEQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGF 98
# DV AE ++L DVL+LQ PL+ +S PA+LK W+DRV + GF
# Sbjct: 62 LVPVAASKTAFEAGALTEDVKAEIEKLLWADVLILQFPLWWFSMPAILKGWVDRVFAYGF 121
#
# Query: 99 AFG-------------KQSELKGKLWRSVITTGGNHTAYDQRGYNRYPLNEILQPFELSA 145
# A+G + L GK ++T GG Y RG N P++++L P
# Sbjct: 122 AYGVGEHSDKRWGDRYGEGSLAGKRAMLIVTAGGWEEHYSARGVNG-PIDDLLFPINHGI 180
#
# Query: 146 ALCQMH-WIEPLVLYWSRNISDQERAQHAERYRQWLQEIAHWQGEPY 191
# + + P V Y + + + + AE R+ ++ I PY
# Sbjct: 181 LYYPGYDVLPPFVAYRADRLDEAGFTEVAEGLRERMRTIGTVSPIPY 227
#
#
# >BH2748
# Length = 198
#
# Score = 53.5 bits (127), Expect = 3e-07
# Identities = 40/138 (28%), Positives = 64/138 (45%), Gaps = 24/138 (17%)
#
# Query: 15 LVVYAHPDPQ---HSVANQVMMEKIADLEHVSIIDLYATYPNFFI--------------- 56
# L++YAHP P+ H++ + + + V + DLYA + +
# Sbjct: 4 LIIYAHPHPESLNHAILDTAVHALKKNGHEVIVRDLYALHFQPVLTPEDISVMNAGDIPQ 63
#
# Query: 57 DVHAEQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAF--GKQSE----LKGKL 110
# D+ EQ+ + DV+ +P++ PA+LK +IDRV S GFA+ G+ E L GK
# Sbjct: 64 DIKTEQEYITRADVITFIYPIWWTGLPAILKGYIDRVFSYGFAYEIGENGEVIRMLTGKK 123
#
# Query: 111 WRSVITTGGNHTAYDQRG 128
# + T G YD+ G
# Sbjct: 124 GLIINTFGHPKENYDEIG 141
#
#
# >BH3885
# Length = 202
#
# Score = 51.6 bits (122), Expect = 1e-06
# Identities = 39/116 (33%), Positives = 56/116 (47%), Gaps = 24/116 (20%)
#
# Query: 8 EQTKAKVLVVYAHPDPQHSVANQVMMEKIADLEHVS----IIDLY--------------- 48
# E T KVL V +HP + S+ +V + L I+DL+
# Sbjct: 7 EDTNMKVLTVVSHPR-KDSLTFEVAEHFVKGLTEAGHEYEILDLHEIGFDPVLKGVDEPD 65
#
# Query: 49 ---ATYPNFFIDVHAEQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAFG 101
# A P F +V E +R++EHD L L PL+ + PA+LK +IDRV + GFA+G
# Sbjct: 66 WSVAEQP-FSPEVEMEIRRMKEHDALALIFPLWWWHLPAMLKGYIDRVWNNGFAYG 120
#
#
# >AF1436
# Length = 220
#
# Score = 37.0 bits (84), Expect = 0.027
# Identities = 23/83 (27%), Positives = 42/83 (49%), Gaps = 8/83 (9%)
#
# Query: 57 DVHAEQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAFGKQSELKGKLWRSVIT 116
# D+ ++ + E D ++L P+Y + A +K +IDR+L +G + LKGK S++
# Sbjct: 64 DMDELKRLVEESDAVILASPVYYLNVTAQMKTFIDRML----PYGHRPTLKGKYGGSIVV 119
#
# Query: 117 TGGNHTAYDQRGYNRYPLNEILQ 139
# G + GY +N +L+
# Sbjct: 120 YAGVGKPEEVAGY----MNRVLK 138
#
#
# >PAE3530
# Length = 300
#
# Score = 31.2 bits (69), Expect = 1.5
# Identities = 13/30 (43%), Positives = 20/30 (66%)
#
# Query: 162 RNISDQERAQHAERYRQWLQEIAHWQGEPY 191
# R +SD+ +AER R+ ++E+A W G PY
# Sbjct: 219 RQVSDRGIRLNAERLRRRIRELASWYGVPY 248
#
#
# >AGl2319
# Length = 491
#
# Score = 29.6 bits (65), Expect = 4.3
# Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
#
# Query: 49 ATYPNFFIDVHAEQQRLREHD-------VLVLQHPLYMYSCPALLKEWIDRVLSKGFAFG 101
# A YP + HAE L++ D ++ L L+ ++ P+ ++ I+ L+KGFA G
# Sbjct: 60 ALYP--IVATHAEGAYLQDVDNNRYVDILMGLGTNLFGHN-PSFIRTAIEAQLTKGFALG 116
#
# Query: 102 KQSELKGK 109
# QS+L G+
# Sbjct: 117 PQSDLAGE 124
#
#
# >AF1896
# Length = 201
#
# Score = 28.9 bits (63), Expect = 7.3
# Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
#
# Query: 57 DVHAEQQRLREHDVLVLQHPLYMYSCPALLKEWIDRVLSKGFAFGKQSELKGKLWRSVIT 116
# D++ ++++E D +V+ P Y + ++K IDR S+ G L+ +++ V+T
# Sbjct: 62 DIYKVLEKMQEADAIVIGTPTYFGNVTGIVKNLIDR--SRMARMGNY-RLRNRVFAPVVT 118
#
# Query: 117 TG 118
# +G
# Sbjct: 119 SG 120
#
#
Database: myva
Posted date: Sep 17, 2002 10:27 AM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.321 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,654,722
Number of Sequences: 192987
Number of extensions: 925124
Number of successful extensions: 2204
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2114
Number of HSP's gapped (non-prelim): 80
length of query: 196
length of database: 59,019,183
effective HSP length: 104
effective length of query: 92
effective length of database: 38,948,535
effective search space: 3583265220
effective search space used: 3583265220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
S2: 62 (28.5 bits)