proteins
1 BUDs| 56 proteins |
R | COG2249 | Putative NADPH-quinone reductase (modulator of drug activity B) | Help | |
|---|---|---|---|---|---|
| 3 from | query genome Bacillus subtilis (Bacillales | Bacilli) | ||||
| 1 BUDs | (BS_ydeQ BS_yrkL BS_ywrO ) | ||||
175 letters 0
0 926 = |||BS_ywrO (175) = 0
-1 546 = |||BS_yrkL (174) = 3
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BS_ywrO
(175 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
BS_ywrO 361 e-100
BS_yrkL 214 6e-56
BS_ydeQ 192 4e-49
lin1898 150 1e-36
FN1233 139 2e-33
STM3458 138 5e-33
CC0205 137 9e-33
YPO0190 135 3e-32
ECs4202 134 1e-31
RSc3097 130 2e-30
ECs0049 126 3e-29
SMa0346 119 3e-27
CAC0018 48 9e-06
BH2748 48 9e-06
BH3885 39 0.004
BS_yvaB 37 0.021
BS_lysC 33 0.24
BH4043 33 0.24
PA2424_2 29 5.8
ML1393_1 28 9.9
# >BS_ywrO
# Length = 175
#
# Score = 361 bits (926), Expect = e-100
# Identities = 175/175 (100%), Positives = 175/175 (100%)
#
# Query: 1 MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRI 60
# MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRI
# Sbjct: 1 MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRI 60
#
# Query: 61 VFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGAN 120
# VFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGAN
# Sbjct: 61 VFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGAN 120
#
# Query: 121 HYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQPFV 175
# HYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQPFV
# Sbjct: 121 HYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQPFV 175
#
#
# >BS_yrkL
# Length = 174
#
# Score = 214 bits (546), Expect = 6e-56
# Identities = 96/171 (56%), Positives = 133/171 (77%)
#
# Query: 1 MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRI 60
# MK LV+ +HP++ETSVVNK W L + +ITV DLY EYP+ IDV KEQQL +++RI
# Sbjct: 1 MKTLVIVIHPNLETSVVNKTWMNRLKQEKDITVHDLYGEYPNFIIDVEKEQQLLLDHERI 60
#
# Query: 61 VFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGAN 120
# VFQFP+YWYSSP LLK+W+D VLT+GWA+G+ G LHGKEL+LA+S+G++ YQAGG
# Sbjct: 61 VFQFPMYWYSSPALLKQWEDDVLTHGWAYGTGGTKLHGKELLLAISSGAQESDYQAGGEY 120
#
# Query: 121 HYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQ 171
# + +ISEL++PFQ T+N IGM++LP + YG + + ED+ +SA+RL +Y++
# Sbjct: 121 NITISELIRPFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSAERLVDYLK 171
#
#
# >BS_ydeQ
# Length = 197
#
# Score = 192 bits (487), Expect = 4e-49
# Identities = 93/170 (54%), Positives = 120/170 (69%)
#
# Query: 1 MKILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRI 60
# MK LVL VHP++E+S +NK W E + ++TV DLY++Y D+ IDV EQQ +DRI
# Sbjct: 4 MKTLVLVVHPNIESSRINKKWKEAVLSEPDVTVHDLYEKYRDQPIDVEFEQQQLLAHDRI 63
#
# Query: 61 VFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGAN 120
# VFQFPLYWYSSPPLLK+W D V T+GWA G GN L GKE + A+S GS YQAGG N
# Sbjct: 64 VFQFPLYWYSSPPLLKQWFDEVFTFGWAHGPGGNKLKGKEWVTAMSIGSPEHSYQAGGYN 123
#
# Query: 121 HYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYI 170
# +SISEL KPFQA+++L+GM YLP + Y N + ++I+ SA R ++I
# Sbjct: 124 LFSISELTKPFQASAHLVGMTYLPSFAEYRANTISDQEIAESANRYVKHI 173
#
#
# >lin1898
# Length = 177
#
# Score = 150 bits (380), Expect = 1e-36
# Identities = 72/159 (45%), Positives = 101/159 (63%), Gaps = 1/159 (0%)
#
# Query: 1 MKILVLAVHPHMETSVVNKAWAEELSKH-DNITVRDLYKEYPDEAIDVAKEQQLCEEYDR 59
# MK LV+ HP++E S VN+ W E L K + + + +LY+ YP+ IDVA EQQ + YD+
# Sbjct: 1 MKTLVIIAHPNIENSRVNRVWKEALLKSTEELAIHELYEVYPNWDIDVAFEQQQLQNYDK 60
#
# Query: 60 IVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGA 119
# ++ QFP YWYS PPLLKKW D V +YGWA+GS+G+ + GK+L LAVS G + Y+
# Sbjct: 61 VIIQFPFYWYSYPPLLKKWFDDVFSYGWAYGSKGDKMAGKKLALAVSIGDKKYNYKEDAP 120
#
# Query: 120 NHYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAED 158
# YS+ LL PF+AT N I Y + YG ++ ++
# Sbjct: 121 IDYSLDTLLTPFRATINHIRADYRGAHTIYGSSFEVTDE 159
#
#
# >FN1233
# Length = 180
#
# Score = 139 bits (351), Expect = 2e-33
# Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 8/174 (4%)
#
# Query: 1 MKILVLAVHPHMETSVVNKAWAEELSKH-DNITVRDLYKEYPDEAID-VAKEQQLCEEYD 58
# MK L++ HP+++ S VNK+W +E K+ D T+ +LY+ YP+E ID + KEQ+L EE+D
# Sbjct: 5 MKTLIVVAHPNLKDSKVNKSWLKEAEKYPDKFTIHNLYEAYPNEVIDNIEKEQKLIEEHD 64
#
# Query: 59 RIVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGG 118
# ++ QFP+YW++ P +KKW D V T GWA+G GN L + + LAV+ G Y G
# Sbjct: 65 SLILQFPIYWFNCPSFMKKWLDDVFTDGWAYGKNGNNLENRNIGLAVTAGISENNYSESG 124
#
# Query: 119 ANHYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQ 172
# +S+ E+L PF+ T + Y + FY + A + KR+ + I Q
# Sbjct: 125 KYKHSLKEILLPFEMTFDYCSANYKGFHAFYSAEFEATD------KRIKDSIPQ 172
#
#
# >STM3458
# Length = 183
#
# Score = 138 bits (348), Expect = 5e-33
# Identities = 68/172 (39%), Positives = 99/172 (57%)
#
# Query: 2 KILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIV 61
# K+L+L HP + SV N+ + +H+N+TV DLY YPD ID EQ L E+D IV
# Sbjct: 6 KVLLLYAHPESQDSVANRVLLKPAIQHNNVTVHDLYARYPDFFIDTPYEQALLREHDVIV 65
#
# Query: 62 FQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANH 121
# FQ PLY YS P LLK+W D VL+ G+A G GN L GK ++TG Y+ N
# Sbjct: 66 FQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLVGKYWRSVITTGEPESAYRYDALNR 125
#
# Query: 122 YSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQP 173
# Y +S++L+PF+ T+ + M ++PP + Y + + ++ AK E++ P
# Sbjct: 126 YPMSDVLRPFELTAAMCRMHWMPPIIVYWARRQSPQTLASHAKAYGEWLANP 177
#
#
# >CC0205
# Length = 185
#
# Score = 137 bits (346), Expect = 9e-33
# Identities = 66/156 (42%), Positives = 99/156 (63%), Gaps = 3/156 (1%)
#
# Query: 3 ILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIVF 62
# +L++ HP +E S N+A A+ +T +DLY+ YPD ID+ EQ +D +
# Sbjct: 8 VLLVLAHPALERSRANRALAKAAKGLSGVTFKDLYEIYPDFVIDIESEQAALSAHDVVAL 67
#
# Query: 63 QFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANHY 122
# QFPLYWYS+P L+K+W DLV +G+A+G G AL GK+L +A +TG+ A+ Y A G N +
# Sbjct: 68 QFPLYWYSTPALMKEWLDLVWLHGFAYGEGGEALKGKKLFVACTTGAGAKAYHAHGYNRF 127
#
# Query: 123 SISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAED 158
# S+ E L+P + T++L GM + P+V +G AA +D
# Sbjct: 128 SMDEFLRPLEQTAHLCGMVWEAPFVVHG---AAVKD 160
#
#
# >YPO0190
# Length = 183
#
# Score = 135 bits (341), Expect = 3e-32
# Identities = 65/172 (37%), Positives = 101/172 (57%)
#
# Query: 2 KILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIV 61
# K+L+L HP + SV N+ + + + +++TV DLY YPD ID+ EQQL ++ IV
# Sbjct: 7 KVLLLYAHPESQDSVANRVLLQPVQQLEHVTVHDLYAHYPDFFIDIHHEQQLLRDHQVIV 66
#
# Query: 62 FQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANH 121
# FQ PLY YS P LLK+W D VL G+A G G+AL GK ++TG + Y+ GG N
# Sbjct: 67 FQHPLYTYSCPALLKEWLDRVLARGFANGVGGHALTGKHWRSVITTGEQEGTYRIGGYNR 126
#
# Query: 122 YSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQP 173
# Y + ++L+PF+ T+ + M ++ P + Y E ++ A+ +++Q P
# Sbjct: 127 YPMEDILRPFELTAAMCHMHWINPMIIYWARRQKPETLASHAQAYVQWLQSP 178
#
#
# >ECs4202
# Length = 184
#
# Score = 134 bits (337), Expect = 1e-31
# Identities = 64/172 (37%), Positives = 100/172 (57%)
#
# Query: 2 KILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIV 61
# K+L+L HP + SV N+ + ++ N+TV DLY YPD ID+ +EQ L E++ IV
# Sbjct: 7 KVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHYPDFFIDIPREQALLREHEVIV 66
#
# Query: 62 FQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANH 121
# FQ PLY YS P LLK+W D VL+ G+A G GN L GK ++TG Y+ N
# Sbjct: 67 FQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALNR 126
#
# Query: 122 YSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQQP 173
# Y +S++L+PF+ + + M +L P + Y +A++++ A+ +++ P
# Sbjct: 127 YPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANP 178
#
#
# >RSc3097
# Length = 182
#
# Score = 130 bits (326), Expect = 2e-30
# Identities = 65/170 (38%), Positives = 96/170 (56%)
#
# Query: 2 KILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIV 61
# +ILV+ HP S NK A L+ + + DLY YP+ IDV EQQ E D +V
# Sbjct: 5 RILVIYAHPAPRRSRANKPLARMLAGLPGVALHDLYWHYPEFDIDVRAEQQALEAADLVV 64
#
# Query: 62 FQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANH 121
# QFP+ WY++P LLK+W D+VL GWA+G G AL GK +++ +TG A Y G +
# Sbjct: 65 LQFPVQWYATPSLLKEWLDVVLEMGWAYGPGGTALRGKHMLVLATTGGRAHAYSRDGIHG 124
#
# Query: 122 YSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDISHSAKRLAEYIQ 171
# ++ L P Q T+ L GM +LPP+V + + A+ E + +++ +Q
# Sbjct: 125 HAFDLFLLPLQQTAALCGMHWLPPHVLHDADDASPEVLDAHLEQVRASLQ 174
#
#
# >ECs0049
# Length = 176
#
# Score = 126 bits (316), Expect = 3e-29
# Identities = 66/171 (38%), Positives = 94/171 (54%), Gaps = 6/171 (3%)
#
# Query: 3 ILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAKEQQLCEEYDRIVF 62
# IL++ HP+ S NK E+ + + +R LY+ YPD ID+A EQ+ D IV+
# Sbjct: 2 ILIIYAHPYPHHSHANKRMFEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVW 61
#
# Query: 63 QFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANHY 122
# Q P+ WYS PPLLK W D V ++GWA+G G ALHGK L+ AV+TG ++ G H
# Sbjct: 62 QHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGA--HP 119
#
# Query: 123 SISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDIS----HSAKRLAEY 169
# L +P QAT+ G+ +LPP+ + E + H +RL E+
# Sbjct: 120 GFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEW 170
#
#
# >SMa0346
# Length = 205
#
# Score = 119 bits (299), Expect = 3e-27
# Identities = 69/183 (37%), Positives = 100/183 (53%), Gaps = 9/183 (4%)
#
# Query: 2 KILVLAVHPHMETSVVNKAWAEELSKHDNITVRDLYKEYPDEAI---DVAKEQQLCEEYD 58
# K L+L HP ++ S N A A +K D + V D+ YPD D +E + D
# Sbjct: 17 KTLILLFHPDLKRSKANAALAGAAAKLDGVEVADMQAAYPDSMDMFRDGEREARRLLAAD 76
#
# Query: 59 RIVFQFPLYWYSSPPLLKKWQDLVLT--YGWAFGSEGNALHGKELMLAVSTGSEAEKYQA 116
# RIV QFP+ WYS+PPL+K WQD VLT + + +EG AL G LMLA + G+ E Y+
# Sbjct: 77 RIVLQFPIQWYSTPPLMKAWQDGVLTRMFYVTYETEGRALEGTPLMLAATAGNVPESYRP 136
#
# Query: 117 GGANHYSISELLKPFQATSNLIGMKYLPPYVFYGVNYAAAEDI----SHSAKRLAEYIQQ 172
# GG N +++ LL P +AT++ G+ P++ Y + AE++ S+ A L +I
# Sbjct: 137 GGRNMFTMEALLAPLRATAHRCGLSCTAPFIIYQADKLEAEELEAAASNYAATLKNWIAG 196
#
# Query: 173 PFV 175
# P V
# Sbjct: 197 PLV 199
#
#
# >CAC0018
# Length = 200
#
# Score = 48.1 bits (113), Expect = 9e-06
# Identities = 36/145 (24%), Positives = 67/145 (45%), Gaps = 26/145 (17%)
#
# Query: 1 MKILVLAVHPHMETSVVNKAWAEELSKHDN-----ITVRDLYKEYPDEAI---------- 45
# M L++ HP+ + K +E+ K + +RDLY+ D +
# Sbjct: 1 MNNLIVFAHPNPNS--FGKGILDEVVKASEESGAAVRIRDLYQLGFDPILKPADFETFQR 58
#
# Query: 46 -----DVAKEQQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAF----GSEGNAL 96
# D+ EQ+ + + I F +P++W P +LK + D V +YG+A+ G L
# Sbjct: 59 GEVPQDIKDEQENVKWANMITFIYPVWWAGLPAMLKGYVDRVYSYGFAYEYVDGQPRGLL 118
#
# Query: 97 HGKELMLAVSTGSEAEKYQAGGANH 121
# GK+ ++ +TG+ ++ Y A G ++
# Sbjct: 119 TGKKALIFCTTGTPSDVYGANGMHN 143
#
#
# >BH2748
# Length = 198
#
# Score = 48.1 bits (113), Expect = 9e-06
# Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
#
# Query: 1 MKILVLAVHPHMET---SVVNKAWAEELSKHDNITVRDLYKEYPDEAI------------ 45
# M L++ HPH E+ ++++ A + VRDLY + +
# Sbjct: 1 MNHLIIYAHPHPESLNHAILDTAVHALKKNGHEVIVRDLYALHFQPVLTPEDISVMNAGD 60
#
# Query: 46 ---DVAKEQQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAF--GSEGNA---LH 97
# D+ EQ+ D I F +P++W P +LK + D V +YG+A+ G G L
# Sbjct: 61 IPQDIKTEQEYITRADVITFIYPIWWTGLPAILKGYIDRVFSYGFAYEIGENGEVIRMLT 120
#
# Query: 98 GKELMLAVSTGSEAEKYQAGG 118
# GK+ ++ + G E Y G
# Sbjct: 121 GKKGLIINTFGHPKENYDEIG 141
#
#
# >BH3885
# Length = 202
#
# Score = 39.3 bits (90), Expect = 0.004
# Identities = 21/68 (30%), Positives = 37/68 (53%), Gaps = 2/68 (2%)
#
# Query: 46 DVAKEQQLCEEYDRIVFQFPLYWYSSPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAV 105
# +V E + +E+D + FPL+W+ P +LK + D V G+A+G+ N LH + ++
# Sbjct: 76 EVEMEIRRMKEHDALALIFPLWWWHLPAMLKGYIDRVWNNGFAYGA--NHLHHQHVLWIG 133
#
# Query: 106 STGSEAEK 113
# G E+
# Sbjct: 134 LAGVSKEQ 141
#
#
# >BS_yvaB
# Length = 211
#
# Score = 37.0 bits (84), Expect = 0.021
# Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 35/123 (28%)
#
# Query: 2 KILVLAVHPHMETS----VVNKAWAE---ELSKHDNITVRDLYKEY-------------- 40
# K+L + HPH E + KA+ E E + +D + DLYKE
# Sbjct: 3 KVLYITAHPHDEATSYSMATGKAFIESYKEANPNDEVVHIDLYKENIPHIDADVFSGWGK 62
#
# Query: 41 -----------PDEAIDVAKEQQLCEEY---DRIVFQFPLYWYSSPPLLKKWQDLVLTYG 86
# E V + +L +++ D+ VF PL+ +S PP++K + D V G
# Sbjct: 63 LQSGTGFEELSESEKAKVGRLGELSDQFASADKYVFVTPLWNFSFPPVMKAYLDSVAVAG 122
#
# Query: 87 WAF 89
# +F
# Sbjct: 123 KSF 125
#
#
# >BS_lysC
# Length = 408
#
# Score = 33.5 bits (75), Expect = 0.24
# Identities = 28/108 (25%), Positives = 45/108 (40%), Gaps = 5/108 (4%)
#
# Query: 15 SVVNKAWAEELSKHDNITVRDLYKEYPDEAIDVAK---EQQLCEEYDRIVFQFPLYWYS- 70
# + N+A AE+ H + V + DE + +AK +Q E D ++ S
# Sbjct: 21 NAANRAIAEKQKGHQVVVVVSAMGKSTDELVSLAKAISDQPSKREMDMLLATGEQVTISL 80
#
# Query: 71 -SPPLLKKWQDLVLTYGWAFGSEGNALHGKELMLAVSTGSEAEKYQAG 117
# S L +K D V GW G A+HG + + T A++ + G
# Sbjct: 81 LSMALQEKGYDAVSYTGWQAGIRTEAIHGNARITDIDTSVLADQLEKG 128
#
#
# >BH4043
# Length = 211
#
# Score = 33.5 bits (75), Expect = 0.24
# Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 35/123 (28%)
#
# Query: 2 KILVLAVHPHMETSVVNKAWA-------EELSKHDNITVRDLYKEY-------------- 40
# K+L + HP E + A +E K D + DLYKE
# Sbjct: 3 KVLYITAHPLNEEQSFSLAAGTAFIETYKEEHKDDEVIHLDLYKEEIPHIDAHVFSGWGK 62
#
# Query: 41 -----------PDEAIDVAKEQQLCEEY---DRIVFQFPLYWYSSPPLLKKWQDLVLTYG 86
# +E V + +L E++ D+ VF PL+ +S PP+LK + D V G
# Sbjct: 63 LQNNKGFEELSQEEQAKVGRLSELSEQFVAADKYVFVTPLWNFSFPPVLKAYIDAVAVAG 122
#
# Query: 87 WAF 89
# F
# Sbjct: 123 KTF 125
#
#
# >PA2424_2
# Length = 1050
#
# Score = 28.9 bits (63), Expect = 5.8
# Identities = 16/53 (30%), Positives = 24/53 (45%)
#
# Query: 87 WAFGSEGNALHGKELMLAVSTGSEAEKYQAGGANHYSISELLKPFQATSNLIG 139
# W + G LHG L + T + + G H +++E L+ QAT L G
# Sbjct: 588 WPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYTLDG 640
#
#
# >ML1393_1
# Length = 546
#
# Score = 28.1 bits (61), Expect = 9.9
# Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
#
# Query: 72 PPLLKKWQDLVLTYGWAFGSEGNALHGKELML-----AVSTGSEA 111
# P + W +L TYGWA G G + G ++ A+ G EA
# Sbjct: 233 PQAVDAWLELCQTYGWAPGVMGASSQGAQVFRRAGFNAIELGDEA 277
#
#
Database: myva
Posted date: Sep 17, 2002 10:27 AM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.317 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,708,831
Number of Sequences: 192987
Number of extensions: 795892
Number of successful extensions: 2291
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2213
Number of HSP's gapped (non-prelim): 84
length of query: 175
length of database: 59,019,183
effective HSP length: 102
effective length of query: 73
effective length of database: 39,334,509
effective search space: 2871419157
effective search space used: 2871419157
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
S2: 61 (28.1 bits)