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UniSTS:55826 Links
STS-K02268
Homo sapiens chromosome 20, locus PDYN
Macaca mulatta chromosome 10, loci LOC717851 and PDYN
Pan troglodytes chromosome 20

Found by e-PCR in sequences from Homo sapiens, Pan troglodytes and Rattus norvegicus.

Primer InformationHelp

Forward primer:GGTTTCCATCAAAGCCCTC
Reverse primer:ATCAGATACCTGGGGACTGC
PCR product size:184 (bp), Homo sapiens

   Homo sapiens
Name: STS-K02268
Also known as: sts-K02268
Polymorphism info:  

Cross References Help
Gene GeneID:5173
 Symbol:PDYN
 Description:prodynorphin
 Position:20pter-p12
UniGeneHs.22584 Prodynorphin

Mapping InformationHelp
STS-K02268 Sequence Map: Chr 20 Map Viewer
  Position: 1907555-1907738 (bp)
 
STS-K02268 Sequence Map: Chr 20|HuRef Map Viewer
  Position: 1909500-1909683 (bp)
 
STS-K02268 Sequence Map: Chr 20|Celera Map Viewer
  Position: 2023528-2023711 (bp)
 
sts-K02268 NCBI RH Map: Chr 20 Map Viewer
  Position: 28.2 (cR)
  Lod score: 1.11
 
sts-K02268 GeneMap99-GB4 Map: Chr 20 Map Viewer
  Position: 11.04 (cR3000)
  Lod score: 3.00
  Reference Interval: D20S117-D20S113

Electronic PCR results Help
RefSeq mRNA (1)
NM_024411.2 2221 .. 2404 (184 bp)  
 
mRNA (1)
BC026334.1 2223 .. 2406 (184 bp)  
 
Genomic (5 of 10)[Show All Hits]
K02268.1 1900 .. 2083 (184 bp)  
G06346.1 1239 .. 1422 (184 bp)  
AH002816.2 2121 .. 2304 (184 bp)  
AL034562.3 58782 .. 58965 (184 bp)  
CH003467.1 1880128 .. 1880311 (184 bp)  
 
ESTs (5 of 7)[Show All Hits]
AA436811.1 131 .. 314 (184 bp)  
AI341273.1 154 .. 337 (184 bp)  
AW139616.1 167 .. 350 (184 bp)  
AW274274.1 155 .. 338 (184 bp)  
AW340668.1 146 .. 329 (184 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01167360.1 7588 .. 7771 (184 bp)  
AADC01141122.1 1131413 .. 1131596 (184 bp)  
AADB02020249.1 307818 .. 308001 (184 bp)  
ABBA01053785.1 7502 .. 7685 (184 bp)  
 

   Macaca mulatta
Name: STS-K02268
Polymorphism info:  

Cross References Help
Gene GeneID:716341
 Symbol:PDYN
 Description:prodynorphin
 Position: 
Gene GeneID:717851
 Symbol:LOC717851
 Description:hypothetical protein LOC717851
 Position: 

Mapping InformationHelp
STS-K02268 Sequence Map: Chr Un|NW_001197257.1 Map Viewer
  Position: 657-841 (bp)
 
STS-K02268 Sequence Map: Chr 10 Map Viewer
  Position: 35293039-35293223 (bp)

   Pan troglodytes
Name: STS-K02268
Polymorphism info:  
Mapping InformationHelp
STS-K02268 Sequence Map: Chr 20 Map Viewer
  Position: 1867065-1867249 (bp)

Electronic PCR results Help
Genomic (1)
CM000334.2 1867065 .. 1867249 (185 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01202620.1 701 .. 885 (185 bp)  
AACZ02188666.1 7349 .. 7533 (185 bp)  
 

   Rattus norvegicus
 
Polymorphism info:  

Electronic PCR results Help
ESTs (1)
BF404262.1 157 .. 340 (184 bp)  
 

 

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