NCI_CGAP_Pr10

Library Description

Organism:	Homo sapiens
Sex:	male
Organ:	prostate
Tissue:	invasive prostate tumor
Vector:	pAMP10
Vector type:	plasmid (ampicillin resistant)
Lab host:	DH10B

mRNA made from invasive prostate tumor, cDNA made by oligo-dT priming. Non-directionally cloned. Size-selected on agarose gel, average insert size 600 bp. Library made by D. Krizman, NIH.

Source: Robert Strausberg, Ph.D.

Gene Content Analysis

883 ESTs from this library were grouped into 536 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM	UniGene Entry
17	19253	Hs.171995	Kallikrein-related peptidase 3.
11	12458	Hs.5662	Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1.
11	12458	Hs.433701	Ribosomal protein L37a.
10	11325	Hs.387208	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed.
10	11325	Hs.381126	Ribosomal protein S14.
9	10193	Hs.546286	Ribosomal protein S3.
9	10193	Hs.397609	Ribosomal protein S16.
9	10193	Hs.275865	Similar to ribosomal protein S18.
8	9060	Hs.469473	Ribosomal protein L31.
7	7928	Hs.658436	Ribosomal protein L41.
7	7928	Hs.652114	Ribosomal protein L28.
7	7928	Hs.534404	Ribosomal protein L10.
7	7928	Hs.515560	Kallikrein-related peptidase 2.
7	7928	Hs.437594	Ribosomal protein, large, P2.
7	7928	Hs.433529	Ribosomal protein S11.
7	7928	Hs.15535	Ribosomal protein L11.
6	6795	Hs.378103	Ribosomal protein S5.
5	5663	Hs.8102	Ribosomal protein S20.
5	5663	Hs.558601	Ribosomal protein L37.
5	5663	Hs.523185	Ribosomal protein L13a.
5	5663	Hs.499839	Ribosomal protein L7a.
5	5663	Hs.466804	Phospholipase A2, group IIA (platelets, synovial fluid).
5	5663	Hs.449909	Ribosomal protein SA.
5	5663	Hs.433670	Ferritin, light polypeptide.
5	5663	Hs.433427	Ribosomal protein S17.
5	5663	Hs.255462	Microseminoprotein, beta-.
5	5663	Hs.181244	Major histocompatibility complex, class I, A.
5	5663	Hs.118076	Ribosomal protein S4, X-linked.
4	4530	Hs.704508	Transcribed locus.
4	4530	Hs.654404	Major histocompatibility complex, class I, C.
4	4530	Hs.653904	Ribosomal protein L41.
4	4530	Hs.5308	Ubiquitin A-52 residue ribosomal protein fusion product 1.
4	4530	Hs.523463	Ribosomal protein L27a.
4	4530	Hs.437638	X-box binding protein 1.
4	4530	Hs.374650	Interferon induced transmembrane protein 3 (1-8U).
4	4530	Hs.372914	N-myc downstream regulated 1.
4	4530	Hs.178551	Ribosomal protein L8.
4	4530	Hs.156367	Ribosomal protein S29.
4	4530	Hs.119598	Ribosomal protein L3.
3	3398	Hs.75864	Lectin, mannose-binding 2.
3	3398	Hs.716396	Heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa).
3	3398	Hs.663504	Transcribed locus.
3	3398	Hs.663477	Transcribed locus.
3	3398	Hs.658976	Transcribed locus.
3	3398	Hs.658437	Ribosomal protein L41.
3	3398	Hs.643910	SRY (sex determining region Y)-box 4.
3	3398	Hs.632703	Ribosomal protein L41.
3	3398	Hs.627414	Ribosomal protein S18.
3	3398	Hs.586423	Eukaryotic translation elongation factor 1 alpha 1.
3	3398	Hs.534322	Major histocompatibility complex, class II, DR beta 1.
3	3398	Hs.524910	Ferritin, heavy polypeptide 1.
3	3398	Hs.524368	Vitamin D (1,25- dihydroxyvitamin D3) receptor.
3	3398	Hs.517155	Prostate transmembrane protein, androgen induced 1.
3	3398	Hs.513083	Ribosomal protein L9.
3	3398	Hs.512676	Ribosomal protein S25.
3	3398	Hs.446852	Eukaryotic translation initiation factor 3, subunit L.
3	3398	Hs.445351	Lectin, galactoside-binding, soluble, 1.
3	3398	Hs.424126	Small EDRK-rich factor 2.
3	3398	Hs.38972	Tetraspanin 1.
3	3398	Hs.381219	Ribosomal protein L15.
3	3398	Hs.370504	Ribosomal protein S15a.
3	3398	Hs.350927	Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6.
3	3398	Hs.337766	Ribosomal protein L18a.
3	3398	Hs.265174	Ribosomal protein L32.
3	3398	Hs.211511	Tectonic family member 1.
3	3398	Hs.182825	Ribosomal protein L35.
3	3398	Hs.144835	Eukaryotic translation elongation factor 1 gamma.
3	3398	Hs.122523	Staphylococcal nuclease and tudor domain containing 1.
2	2265	Hs.97887	Reticulocalbin 1, EF-hand calcium binding domain.
2	2265	Hs.75914	Transmembrane emp24 domain trafficking protein 2.
2	2265	Hs.716791	Transcribed locus, strongly similar to NP_940993.1 basigin isoform 4 [Homo sapiens].
2	2265	Hs.716390	Similar to 23 kD highly basic protein.
2	2265	Hs.709644	Nuclear receptor coactivator 4.
2	2265	Hs.709581	COX16 cytochrome c oxidase assembly homolog (S. cerevisiae).
2	2265	Hs.709251	Transcribed locus, strongly similar to XP_001476854.1 PREDICTED: hypothetical protein [Mus musculus].
2	2265	Hs.709037	Transcribed locus, moderately similar to XP_904556.1 PREDICTED: similar to hCG2016250, isoform 3 [Mus musculus].
2	2265	Hs.707347	Transcribed locus, strongly similar to XP_418020.1 PREDICTED: similar to Rpl10a-prov protein [Gallus gallus].
2	2265	Hs.687808	Transcribed locus.
2	2265	Hs.663508	Transcribed locus.
2	2265	Hs.663487	Transcribed locus.
2	2265	Hs.656298	Transmembrane protein 87B.
2	2265	Hs.655787	Transcribed locus.
2	2265	Hs.655684	Contactin associated protein-like 2.
2	2265	Hs.654816	Jumonji domain containing 2B.
2	2265	Hs.647371	Metallothionein 2A.
2	2265	Hs.644980	Transcribed locus.
2	2265	Hs.644906	Heterogeneous nuclear ribonucleoprotein L.
2	2265	Hs.644421	Ubiquitin-conjugating enzyme E2B (RAD6 homolog).
2	2265	Hs.642660	Chromosome 10 open reading frame 116.
2	2265	Hs.632891	Transcribed locus, strongly similar to NP_001002079.1 ribosomal protein S13 [Danio rerio].
2	2265	Hs.632717	Myosin, light chain 6, alkali, smooth muscle and non-muscle.
2	2265	Hs.632626	HCG18290.
2	2265	Hs.632015	Argininosuccinate lyase.
2	2265	Hs.628393	Ceroid-lipofuscinosis, neuronal 3.
2	2265	Hs.567619	Phosphatidic acid phosphatase type 2 domain containing 1B.
2	2265	Hs.560655	Ribosomal protein SA pseudogene.
2	2265	Hs.546285	Ribosomal protein, large, P0.
2	2265	Hs.546269	Ribosomal protein L10a.
2	2265	Hs.535464	Eukaryotic translation initiation factor 3, subunit C-like.
2	2265	Hs.534477	Ubiquitin-like 5.