R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|11283525|pir||T47912 hypothetical protein T20K12.100 - Arabidopsis thaliana
>gi|6850887|emb|CAB71050.1| (AL137898) putative protein
[Arabidopsis thaliana]
Length = 188
Frame 3 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 188
0 50 100 150
Plus Strand HSPs:
Score = 333 (117.2 bits), Expect = 3.9e-29, P = 3.9e-29
Identities = 68/161 (42%), Positives = 107/161 (66%), Frame = +3
Query: 6 ISKEVDPSHASETLRIVNAMGAATPIPANCNARGFYDAFLRSF---IKVDHIQRGRISCT 176
+SK +DP++ L + + A +P +CN +D+F F + I RGR+SC+
Sbjct: 29 VSKVIDPNYV---LMVADFFKAISP-DESCNDFTSFDSFSVLFQNNTRALSIARGRVSCS 84
Query: 177 VVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSATPANEEV 356
V P I N + LHGG+V S+ E ++ AC +TVV++DK LF+GE+S+SYLS+ P + E+
Sbjct: 85 VTVTPGISNFFKGLHGGAVASIAERVAMACVKTVVSEDKHLFIGELSMSYLSSAPISSEL 144
Query: 357 LANASVVKTGRNLTVVAVEFKLKKAGNLLYITHSTFYNMPVASL 488
L +VV+TGRNL+VV VEFK+K+ + Y++ +TFY+ P++ L
Sbjct: 145 LVEGTVVRTGRNLSVVTVEFKIKETMKVTYLSRATFYHSPISKL 188
>gi|1903364|gb|AAB70447.1| (AC000104) EST gb|T45093 comes from this gene.
[Arabidopsis thaliana]
Length = 155
Frame 3 hits (HSPs): _____________________________________________
__________________________________________________
Database sequence: | | | | | 155
0 50 100 150
Plus Strand HSPs:
Score = 177 (62.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/140 (31%), Positives = 76/140 (54%), Frame = +3
Query: 69 AATPIPANCNARGFYDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVE 248
A P+ A R F + F+ + +KVD I+ GRI C++ P + N LHGG+ +LV+
Sbjct: 18 AKEPMVAKLPHR-FLERFVTNGLKVDLIEPGRIVCSMKIPPHLLNAGKFLHGGATATLVD 76
Query: 249 ILSNACARTVVAKDKELFLGEISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKK 428
++ +A T A + + EI++SYL A +EE+ + ++ G+ + VV+VE + K
Sbjct: 77 LIGSAVIYTAGASHSGVSV-EINVSYLDAAFLDEEIEIESKALRVGKAVAVVSVELRKKT 135
Query: 429 AGNLLYITHSTFYNMPVASL 488
G ++ T Y P ++L
Sbjct: 136 TGKIIAQGRHTKYFAPRSNL 155
>gi|4210351|emb|CAA21139.1| (AL031775) dJ30M3.1 (novel protein similar to
(predicted) plant, worm, yeast and archaea bacterial proteins)
[Homo sapiens]
Length = 113
Frame 3 hits (HSPs): __________________________________________
__________________________________________________
Database sequence: | | | | 113
0 50 100
Plus Strand HSPs:
Score = 111 (39.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/95 (27%), Positives = 47/95 (49%), Frame = +3
Query: 159 GRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSAT 338
G++ C + + N GTLHGG +LV+ +S A + +++I+Y+S
Sbjct: 9 GKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTM-ALLCTERGAPGVSVDMNITYMSPA 67
Query: 339 PANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLL 443
E+++ A V+K G+ L +V+ K G L+
Sbjct: 68 KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLI 102
>gi|8923812 ref|NP_060943.1| uncharacterized hypothalamus protein HT012 [Homo
sapiens] >gi|11418468 ref|XP_004262.1| uncharacterized hypothalamus
protein HT012 [Homo sapiens] >gi|7020647|dbj|BAA91215.1| (AK000508)
unnamed protein product [Homo sapiens]
>gi|7677052|gb|AAF67006.1|AF155649_1 (AF155649) hypothetical 15 kDa
protein [Homo sapiens] >gi|7689023|gb|AAF67651.1|AF220186_1
(AF220186) uncharacterized hypothalamus protein HT012 [Homo
sapiens] >gi|12654153|gb|AAH00894.1|AAH00894 (BC000894)
uncharacterized hypothalamus protein HT012 [Homo sapiens]
Length = 140
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | 140
0 50 100
Plus Strand HSPs:
Score = 111 (39.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/95 (27%), Positives = 47/95 (49%), Frame = +3
Query: 159 GRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSAT 338
G++ C + + N GTLHGG +LV+ +S A + +++I+Y+S
Sbjct: 36 GKVICEMKVEEEHTNAIGTLHGGLTATLVDNISTM-ALLCTERGAPGVSVDMNITYMSPA 94
Query: 339 PANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLL 443
E+++ A V+K G+ L +V+ K G L+
Sbjct: 95 KLGEDIVITAHVLKQGKTLAFTSVDLTNKATGKLI 129
>gi|465883|sp|P34419|YLZ6_CAEEL HYPOTHETICAL 20.1 KD PROTEIN F42H10.6 IN
CHROMOSOME III >gi|1078863|pir||S44652 f42h10.6 protein -
Caenorhabditis elegans >gi|289680|gb|AAA28024.1| (L08403) putative
[Caenorhabditis elegans]
Length = 184
Frame 3 hits (HSPs): _____________________
Annotated Domains: __________________________________________
__________________________________________________
Database sequence: | | | | | 184
0 50 100 150
__________________
Annotated Domains:
PRODOM PD006741: Q18187(2) 14..165
__________________
Plus Strand HSPs:
Score = 115 (40.5 bits), Expect = 0.00016, P = 0.00016
Identities = 26/77 (33%), Positives = 41/77 (53%), Frame = +3
Query: 210 GTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSATPANEEVLANASVVKTGR 389
GTLHGG +L ++++ A A V KDK + E+++SYL + + A V+K GR
Sbjct: 84 GTLHGGQTATLTDVIT-ARAVGVTVKDKGMASVELAVSYLLPVKVGDVLEITAHVLKVGR 142
Query: 390 NLTVVAVEFKLKKAGNL 440
+ EF+ K G +
Sbjct: 143 TMAFTDCEFRRKSDGKM 159
>gi|7484139|pir||S74052 hypothetical protein c0116 - Sulfolobus solfataricus
>gi|1707746|emb|CAA69466.1| (Y08256) orf c01016 [Sulfolobus
solfataricus] >gi|12313068|emb|CAC23784.1| (AL512975) ORF-c01_016
[Sulfolobus solfataricus]
Length = 140
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | 140
0 50 100
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.0085, P = 0.0085
Identities = 28/95 (29%), Positives = 46/95 (48%), Frame = +3
Query: 135 IKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVV-AKDKELFLGE 311
+KV ++++GR + K R G LHGG + S ++I A TV A D+ E
Sbjct: 24 VKVINLEKGRAVVEIPYKEEFTRRGGVLHGGIIMSAIDITGGLAALTVNDAMDQ--VTQE 81
Query: 312 ISISYLSATPANEEVLANASVVKTGRNLTVVAVEFK 419
+ I++L + V++ G + VV +EFK
Sbjct: 82 LKINFLEPMYKGPFTI-EGKVLRKGSTVIVVEIEFK 116
>gi|7496519|pir||T15630 hypothetical protein C25H3.3 - Caenorhabditis elegans
>gi|868253|gb|AAA68782.1| (U29535) C25H3.3 gene product
[Caenorhabditis elegans]
Length = 273
Frame 3 hits (HSPs): __________________ _____________________
__________________________________________________
Database sequence: | | | | | | | 273
0 50 100 150 200 250
Plus Strand HSPs:
Score = 105 (37.0 bits), Expect = 0.011, P = 0.011
Identities = 28/114 (24%), Positives = 56/114 (49%), Frame = +3
Query: 111 YDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKD 290
Y A R+ ++ H + G + + N++ TLHGG +L++ + ++ K+
Sbjct: 154 YAAGARN-VRAVHAEEGNLRVEFEVEKDQTNQFETLHGGCTAALIDCFTTGAL--LLTKE 210
Query: 291 KELFLG-EISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLLYIT 452
+ ++ I+YL+A E ++ N++V+K GR+L E +K N + T
Sbjct: 211 ARPGVSVDLHITYLTAANIGETLVLNSTVIKQGRSLGFTKAEL-YRKRDNAMIAT 264
Score = 96 (33.8 bits), Expect = 0.13, P = 0.13
Identities = 21/97 (21%), Positives = 45/97 (46%), Frame = +3
Query: 135 IKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEI 314
++ H + G + + N + TLHGG +L++I + A + + ++
Sbjct: 31 VRAVHAEEGNLRVEFEVEKDQSNHFNTLHGGCTSTLIDIFTTG-ALLLTKPARPGVSVDL 89
Query: 315 SISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLK 425
++YL+A E ++ +++V+K G+ L E K
Sbjct: 90 HVTYLTAAKIGETLVLDSTVIKQGKTLAFTKAELYRK 126
>gi|7630243|dbj|BAA94776.1| (AP001859) hypothetical protein [Oryza sativa]
Length = 167
Frame 3 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | | 167
0 50 100 150
Plus Strand HSPs:
Score = 97 (34.1 bits), Expect = 0.026, P = 0.025
Identities = 28/116 (24%), Positives = 55/116 (47%), Frame = +3
Query: 102 RGFYDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVV 281
R ++A + +V + GR C++ + + G H G++ + + + CA ++
Sbjct: 35 RRAFNALPLAGARVSLAEAGRAVCSLRVTAELTDAEGNWHPGAIAAAAD---DVCAAAIM 91
Query: 282 AKDKELFLG-EISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLLYI 449
+ + + + ISY S +EEV + VV+ +T V VE + K +G L+ I
Sbjct: 92 SVEGIIKVSVHYDISYFSPAKLHEEVELDGRVVEQKGKMTAVTVEIRKKDSGELVAI 148
>gi|7630244|dbj|BAA94777.1| (AP001859) Similar to Arabidopsis thaliana
chromosome 1 BAC F19P19; unknown protein (AC000104) [Oryza sativa]
Length = 174
Frame 3 hits (HSPs): ___________________________________________
__________________________________________________
Database sequence: | | | | | 174
0 50 100 150
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.041, P = 0.040
Identities = 39/147 (26%), Positives = 61/147 (41%), Frame = +3
Query: 24 PSHASETLRIVNAMGAATPIPANCNAR----GFYDAF---LRSFIKVDHIQRGRISCTVV 182
P+ A+ LR+ P + AR G DAF + +V + GR+ C+
Sbjct: 6 PAAAAAALRLAAVARRWLENPRDSLARSREEGCGDAFNTVVMPGFRVSLAEPGRLVCSFC 65
Query: 183 AKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDK-ELFLGEISISYLSATPANEEVL 359
+ + G H G++ + V+ N CA V D F ++S+ S EEV
Sbjct: 66 VPAAVADADGRWHAGAMAAAVD---NLCAAVVYTADGVHRFTISQAMSFFSPAAHGEEVE 122
Query: 360 ANASVVKTGRNLTVVAVEFKLKKAGNLLYI 449
+ V LT VE + K +G L+ I
Sbjct: 123 MDGRVAHRKGKLTAAVVEVRRKASGELVAI 152
>gi|7491588|pir||T40205 hypothetical protein SPBC31F10.02 - fission yeast
(Schizosaccharomyces pombe) >gi|2226413|emb|CAB10079.1| (Z97204)
hypothetical protein [Schizosaccharomyces pombe]
Length = 161
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | | 161
0 50 100 150
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.053, P = 0.052
Identities = 29/107 (27%), Positives = 53/107 (49%), Frame = +3
Query: 96 NARGFYDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACART 275
N GF DA + S I++ G + C++ + NR G LHGG + +L ++ +
Sbjct: 23 NTNGF-DAHVVSDIQIISAVPGFVECSLKLQKHHLNRMGNLHGGCIAALTDL-----GGS 76
Query: 276 VVAKDKELFLGEISI----SYL-SATPANEEVLANASVVKTGRNLTVVAVEF 416
+ + LF+ +SI ++L S +L +A + G N+ +V+F
Sbjct: 77 LALASRGLFISGVSIDMNQTFLQSGGTLGSSILLHAKCDRLGSNIAFTSVDF 128
>gi|11350388|pir||E82995 hypothetical protein PA5202 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9951508|gb|AAG08587.1|AE004933_3
(AE004933) hypothetical protein [Pseudomonas aeruginosa]
Length = 129
Frame 3 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | 129
0 50 100
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.11, P = 0.11
Identities = 23/73 (31%), Positives = 37/73 (50%), Frame = +3
Query: 201 NRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSATPANEEVLANASVVK 380
NR G +HGG++ SL+++ + D++ E I+Y+ A A+ EV A V+
Sbjct: 42 NRGGVMHGGALFSLMDVTMGLACSSSHGFDRQSVTLECKINYIRAV-ADGEVRCVARVLH 100
Query: 381 TGRNLTVVAVEFK 419
GR VV E +
Sbjct: 101 AGRRSLVVEAEVR 113
>gi|11499845 ref|NP_071089.1| conserved hypothetical protein [Archaeoglobus
fulgidus] >gi|3334444|sp|O28020|YM64_ARCFU HYPOTHETICAL PROTEIN
AF2264 >gi|7430238|pir||H69532 conserved hypothetical protein
AF2264 - Archaeoglobus fulgidus >gi|2648253|gb|AAB88986.1|
(AE000948) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 154
Frame 3 hits (HSPs): ____________________________________
__________________________________________________
Database sequence: | | | | | 154
0 50 100 150
Plus Strand HSPs:
Score = 89 (31.3 bits), Expect = 0.20, P = 0.18
Identities = 28/112 (25%), Positives = 47/112 (41%), Frame = +3
Query: 138 KVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEIS 317
++ ++ G +V K N HGG + SL ++ A A + K E+S
Sbjct: 39 RILEMKEGYAKVEMVVKKEHLNAANVCHGGIIFSLADL---AFALASNSHGKLALAIEVS 95
Query: 318 ISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLLYITHSTFYNM 473
I+Y+ A E+++A A V G +E K A L+ + T Y +
Sbjct: 96 ITYMKAAYEGEKLVAEAKEVNLGNKTATYLMEVK-NSANKLIALAKGTVYRV 146
>gi|5733877|gb|AAD49765.1|AC007932_13 (AC007932) F11A17.13 [Arabidopsis
thaliana]
Length = 156
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | 156
0 50 100 150
Plus Strand HSPs:
Score = 88 (31.0 bits), Expect = 0.28, P = 0.25
Identities = 32/117 (27%), Positives = 56/117 (47%), Frame = +3
Query: 144 DHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLG-EISI 320
D + RI+ + P C + LHGG + E L++ A +A + G ++SI
Sbjct: 23 DELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGAH--MASGFKRVAGIQLSI 80
Query: 321 SYLSATPANEEVLANASVVKTGRNLTVVAVE-FKL--KKAGNLLYITHST---FYNMPV 479
++L + + V A A+ V TG+ + V V+ +K K N + I+ S N+P+
Sbjct: 81 NHLKSADLGDLVFAEATPVSTGKTIQVWEVKLWKTTQKDKANKILISSSRVTLICNLPI 139
>gi|7292257|gb|AAF47666.1| (AE003475) CG16985 gene product [Drosophila
melanogaster]
Length = 149
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | 149
0 50 100
Plus Strand HSPs:
Score = 87 (30.6 bits), Expect = 0.32, P = 0.27
Identities = 30/115 (26%), Positives = 56/115 (48%), Frame = +3
Query: 99 ARGFYDAFLRSFIKVDHIQRGR-ISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACART 275
+ GF D L+ IK+ GR I VA + NR GTLHGG ++V+ N
Sbjct: 21 SNGF-DRVLK-MIKITGGGDGRAIGEFTVANEHL-NRQGTLHGGLTATIVD---NCTTYA 74
Query: 276 VVAKDKELFL-GEISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLL 443
+++K + +++SY++A E + + + V+ G+ + + + K G ++
Sbjct: 75 LMSKGSHPGVTANLNVSYIAAAKPGELIEIDCNTVRAGKKMAYLDCILRRKSDGKII 131
>gi|11350055|pir||A83149 hypothetical protein PA3971 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9950161|gb|AAG07358.1|AE004815_2
(AE004815) hypothetical protein [Pseudomonas aeruginosa]
Length = 143
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | 143
0 50 100
Plus Strand HSPs:
Score = 86 (30.3 bits), Expect = 0.35, P = 0.29
Identities = 28/100 (28%), Positives = 48/100 (48%), Frame = +3
Query: 189 PPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSATPAN-EEVLAN 365
P + G +H G +L + + A A T+V + + + E ++ L PA + +L
Sbjct: 44 PRHAQQNGFIHAGVQATLADHAAGAAAATLVEEGQTVLTLEFKLNLLR--PALCQRLLCR 101
Query: 366 ASVVKTGRNLTVVAVEFKLKKAGNLLYITHSTFYNMPVASL 488
A V+K GR +TVV E ++ G + +T M V +L
Sbjct: 102 AEVLKAGRQVTVVEAEVFAERDGRRHLFSKATV-TMAVVAL 141
>gi|7473619|pir||E75289 probable phenylacetic acid degradation protein PaaI -
Deinococcus radiodurans (strain R1)
>gi|6460126|gb|AAF11862.1|AE002063_5 (AE002063) phenylacetic acid
degradation protein PaaI, putative [Deinococcus radiodurans]
Length = 146
Frame 3 hits (HSPs): _________________________________________
__________________________________________________
Database sequence: | | | | 146
0 50 100
Plus Strand HSPs:
Score = 84 (29.6 bits), Expect = 0.72, P = 0.51
Identities = 35/130 (26%), Positives = 58/130 (44%), Frame = +3
Query: 54 VNAMGAATPIPANCNARGFYDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSV 233
V+A A TP P A + + + + R++ TV N +GT HGG +
Sbjct: 13 VSAPPARTPYP---EAMSYAEVLGMTILDASP-DLTRVALTVTEAG--LNMHGTAHGGLI 66
Query: 234 GSLVE----ILSNACARTVVAKDKELFLGEISISYLSATPANEEVLANASVVKTGRNLTV 401
SL + ++SN A+ V A E +S+ A E ++A A+ + GR L
Sbjct: 67 FSLADEAFAVISNLDAQAVAA--------ETHMSFFRAAREGERLVAVATPERVGRTLAT 118
Query: 402 VAVEFKLKKAGNLL 443
+E + + G +L
Sbjct: 119 YRIEVRRGEEGEVL 132
>gi|7292258|gb|AAF47667.1| (AE003475) CG16986 gene product [Drosophila
melanogaster]
Length = 143
Frame 3 hits (HSPs): __________________________________
__________________________________________________
Database sequence: | | | | 143
0 50 100
Plus Strand HSPs:
Score = 83 (29.2 bits), Expect = 0.87, P = 0.58
Identities = 27/97 (27%), Positives = 48/97 (49%), Frame = +3
Query: 138 KVDHIQRGRISCTVVAK--PPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLG- 308
KV + G +CT K N Y LHGG + +LV++++ T K G
Sbjct: 30 KVKIVDGGDGACTAELKVDQDHVNLYKFLHGGYIMTLVDLIT-----TYALMSKPCHPGV 84
Query: 309 --EISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKK 428
++S+++L+ ++V+ A++ K G+ L + K KK
Sbjct: 85 SVDLSVNFLNGAKLGDDVVIQANLSKVGKYLAFIDCTLKHKK 126
>gi|141254|sp|P20378|YPHR_HALHA HYPOTHETICAL 15.6 KD PROTEIN IN PHR 5'REGION
>gi|99200|pir||A32580 hypothetical 15K protein
(deoxyribodipyrimidine photo-lyase 5' region) - Halobacterium
salinarum >gi|148792|gb|AAA72748.1| (M24544) ORF151 [Halobacterium
halobium] >gi|10580850|gb|AAG19672.1| (AE005055) Vng1336c
[Halobacterium sp. NRC-1]
Length = 151
Frame 3 hits (HSPs): _______________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | || 151
0 50 100 150
__________________
Annotated Domains:
PRODOM PD175497: YPHR_HALHA 1..23
PRODOM PD006741: Q18187(2) 25..144
__________________
Plus Strand HSPs:
Score = 82 (28.9 bits), Expect = 1.5, P = 0.77
Identities = 19/67 (28%), Positives = 37/67 (55%), Frame = +3
Query: 210 GTLHGGSVGSLVEILSNACARTVVAKDKELFLG--EISISYLSATPANEEVLANASVVKT 383
G +HGG +L++ R+ + K + ++++SYL PA +++A+ASVV+
Sbjct: 56 GDVHGGIAATLIDTAGGLAVRSALPKPVAANVATIDLNVSYLR--PARGDLIADASVVRV 113
Query: 384 GRNLTVVAV 410
G + V +
Sbjct: 114 GSTVGVAEI 122
>gi|7471259|pir||E75467 ComA-related protein - Deinococcus radiodurans (strain
R1) >gi|6458566|gb|AAF10426.1|AE001939_3 (AE001939) ComA-related
protein [Deinococcus radiodurans]
Length = 119
Frame 3 hits (HSPs): ______________________________________________
__________________________________________________
Database sequence: | | | | 119
0 50 100
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 1.9, P = 0.86
Identities = 27/109 (24%), Positives = 46/109 (42%), Frame = +3
Query: 135 IKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLG-E 311
I+ HI+RG + + +P + G LH SV +L + R ++ + F E
Sbjct: 4 IRFTHIERGLLRSELTVRPELFAPNGYLHAASVVALADTTCGYGTRVLLPDEATGFTTIE 63
Query: 312 ISISYLSATPANEEVLANASVVKTGRNLTVVAVEFKLKKAGNLLYITHST 461
+ ++L T V A V GR V E + + GN++ + T
Sbjct: 64 LKSNHLG-TSRQGVVTCEARAVHAGRTTQVWDAEVR-NEQGNVMALFRCT 111
>gi|3980377|gb|AAC95180.1| (AC004561) unknown protein [Arabidopsis thaliana]
Length = 157
Frame 3 hits (HSPs): _______________________________________
__________________________________________________
Database sequence: | | | | | 157
0 50 100 150
Plus Strand HSPs:
Score = 81 (28.5 bits), Expect = 2.3, P = 0.90
Identities = 31/121 (25%), Positives = 61/121 (50%), Frame = +3
Query: 102 RGFYDAFLRSFIKVDHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVV 281
+ FY+ F I+V+ ++ G ISC+ + +R L G++ +LV+ + A V
Sbjct: 31 KSFYENFSLRGIRVNRVEPGFISCSFKVPLRLTDRDKNLANGAIANLVDEVGGAL---VH 87
Query: 282 AKDKELFLG-EISISYLSATPANEEVLANASVV--KTGRNLTVVAVEFKLKKAGNLLYI- 449
+ + + ++SI++LS EE+ + ++ + G T+V V K+ G ++
Sbjct: 88 GEGLPMSVSVDMSIAFLSKAKLGEELEITSRLLGERGGYKGTIVVVRNKM--TGEIIAEG 145
Query: 450 THSTF 464
HS F
Sbjct: 146 RHSMF 150
>gi|11350298|pir||B83042 hypothetical protein PA4830 [imported] - Pseudomonas
aeruginosa (strain PAO1) >gi|9951099|gb|AAG08215.1|AE004896_5
(AE004896) hypothetical protein [Pseudomonas aeruginosa]
Length = 179
Frame 3 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | 179
0 50 100 150
Plus Strand HSPs:
Score = 79 (27.8 bits), Expect = 5.8, P = 1.0
Identities = 29/87 (33%), Positives = 40/87 (45%), Frame = +3
Query: 201 NRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISISYLSA-TPANEEVLANASVV 377
N G++HGG SL++ T + + ++ ISYL A T V A VV
Sbjct: 85 NPLGSVHGGYAASLLDSCMGCAIHTRLQAGQGYTTTDLRISYLRALTDKVGPVRAEGRVV 144
Query: 378 KTGRNLTVVAVEFKLKKAGNLLYITHST 461
GR+ T VA E +L + LY ST
Sbjct: 145 HLGRS-TAVA-EGRLYDVDDRLYAVGST 170
>gi|10177184|dbj|BAB10318.1| (AB017061) gb|AAD49765.1~gene_id:K19E20.6~similar
to unknown protein [Arabidopsis thaliana]
Length = 157
Frame 3 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 157
0 50 100 150
Plus Strand HSPs:
Score = 77 (27.1 bits), Expect = 7.2, P = 1.0
Identities = 26/95 (27%), Positives = 42/95 (44%), Frame = +3
Query: 144 DHIQRGRISCTVVAKPPICNRYGTLHGGSVGSLVEILSNACARTVVAKDKELFLGEISIS 323
D + R+S + C + LHGG + E L++ A + + K + +SI
Sbjct: 22 DELSATRVSGHLTLTEKCCQPFKVLHGGVSALIAEALASLGAG-IASGFKRVAGIHLSIH 80
Query: 324 YLSATPANEEVLANASVVKTGRNLTVVAVE-FKLKK 428
+L E V A + V G+N+ V V +K KK
Sbjct: 81 HLRPAALGEIVFAESFPVSVGKNIQVWEVRLWKAKK 116
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.325 0.139 0.405
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.359 0.159 0.702
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.342 0.149 0.509
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.358 0.157 0.654
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.328 0.140 0.431
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.348 0.149 0.474
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 194 194 10. 76 3 12 22 0.091 35
31 0.10 38
+2 0 194 194 10. 76 3 12 22 0.091 35
31 0.10 38
+1 0 195 195 10. 76 3 12 22 0.091 35
31 0.10 38
-1 0 195 195 10. 76 3 12 22 0.091 35
31 0.10 38
-2 0 194 194 10. 76 3 12 22 0.091 35
31 0.10 38
-3 0 194 194 10. 76 3 12 22 0.091 35
31 0.10 38
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 22
No. of states in DFA: 594 (59 KB)
Total size of DFA: 236 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 208.11u 1.22s 209.33t Elapsed: 00:00:36
Total cpu time: 208.18u 1.22s 209.40t Elapsed: 00:00:36
Start: Thu Jan 17 17:27:24 2002 End: Thu Jan 17 17:28:00 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000