| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 200934 | hypothetical | YPO0001 | flavodoxin An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group | genbank | 16120354 | NP_403667.1 | 146 | 271 | 711 | |
| 200935 | asnC | hypothetical | YPO0002 | regulatory protein Similar to the Escherichia coli regulator of AnsA: AsnC SW:ASNC_ECOLI (P03809) (152 aa) fasta scores: E(): 0, 84.8% id in 151 aa | genbank | 16120355 | NP_403668.1 | 153 | 804 | 1265 |
| 200936 | asnA | hypothetical | YPO0003 | asparagine synthetase AsnA catalyzes the formation of asparagine from aspartate and ammonia | genbank | 16120356 | NP_403669.1 | 330 | 1435 | 2427 |
| 200937 | hypothetical | YPO0004 | hypothetical protein Similar to Vibrio cholerae hypothetical protein VCA0762 TR:Q9KLI2 (EMBL:AE004404) (481 aa) fasta scores: E(): 0, 34.1% id in 496 aa | genbank | 16120357 | NP_403670.1 | 488 | 2526 | 3992 | |
| 200938 | hypothetical | YPO0005 | hypothetical protein Similar to Escherichia coli hypothetical protein YieN SW:YIEN_ECOLI (P31473) (498 aa) fasta scores: E(): 0, 67.8% id in 497 aa | genbank | 16120358 | NP_403671.1 | 517 | 3996 | 5549 | |
| 200939 | kup | hypothetical | YPO0006 | potassium transport protein Similar to Escherichia coli low affinity potassium uptake system protein Kup SW:KUP_ECOLI (P30016) (622 aa) fasta scores: E(): 0, 84.2% id in 622 aa | genbank | 16120359 | NP_403672.1 | 622 | 5823 | 7691 |
| 200940 | hypothetical | YPO0007 | ribose permease Similar to Lactobacillus sake ribose permease RbsD TR:Q9X4M4 (EMBL:AF115391) (131 aa) fasta scores: E(): 5.7e-18, 39.6% id in 139 aa, and to Escherichia coli high affinity ribose transport protein RbsD SW:RBSD_ECOLI (P04982) (151 aa) fasta scores: E(): 0, 68.3% id in 139 aa. Although lacks the first 12 amino acids of the E. coli protein | genbank | 16120360 | NP_403673.1 | 139 | 7896 | 8315 | |
| 200941 | rbsK | hypothetical | YPO0008 | ribokinase Similar to Escherichia coli ribokinase RbsK SW:RBSK_ECOLI (P05054) (309 aa) fasta scores: E(): 0, 71.4% id in 304 aa | genbank | 16120361 | NP_403674.1 | 308 | 8366 | 9292 |
| 200942 | hypothetical | YPO0009 | putative membrane transport protein Similar to many proteins belonging to the major facilitator family of drug resistance translocases e.g. Neisseria gonorrhoeae efflux transporter membrane protein AgrA TR:BAB13740 (EMBL:AB032563) (468 aa) fasta scores: E(): 0, 45.4% id in 460 aa Also highly similar to Escherichia coli hypothetical 51.5 kDa protein in rbsr-rrsc intergenic region yieO SW:YIEO_ECOLI (P31474) (475 aa) fasta scores: E(): 0, 74.2% id in 457 aa | genbank | 16120362 | NP_403675.1 | 474 | 9512 | 10936 | |
| 200943 | hypothetical | YPO0010 | putative GntR-famly transcriptional regulator Similar to several including: Streptomyces coelicolor putative GntR-famly transcriptional regulator scf37.08 TR:Q9RJZ3 (EMBL:AL133210) (246 aa) fasta scores: E(): 6.5e-18, 32.6% id in 215 aa and Escherichia coli hypothetical protein YieP SW:YIEP_ECOLI (P31475) (181 aa) fasta scores: E(): 0, 64.1% id in 181 aa | genbank | 16120363 | NP_403676.1 | 229 | 11016 | 11705 | |
| 200944 | y1062 | hypothetical | YPO0011 | transposase for the IS285 insertion element Previously sequenced Yersinia pestis transposase Y1062 or Ypmt1.80C TR:O68779 (EMBL:AF053947) (402 aa) fasta scores: E(): 0, 100.0% id in 402 aa. | genbank | 16120364 | NP_403677.1 | 402 | 17906 | 19114 |
| 200945 | mobB | hypothetical | YPO0012 | probable molybdopterin-guanine dinucleotide biosynthesis protein B Similar to Escherichia coli molybdopterin-guanine dinucleotide biosynthesis protein B, MobB SW:MOBB_ECOLI (P32125) (174 aa) fasta scores: E(): 0, 62.2% id in 164 aa | genbank | 16120365 | NP_403678.1 | 176 | 19172 | 19702 |
| 200946 | mobA | hypothetical | YPO0013 | molybdopterin-guanine dinucleotide biosynthesis protein A MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis | genbank | 16120366 | NP_403679.1 | 213 | 19702 | 20343 |
| 200947 | hypothetical | YPO0013a | hypothetical protein Similar to Pectobacterium carotovorum subsp. cartovorum hypothetical protein YihD TR:Q9RB12 (EMBL:AF146615) (89 aa) fasta scores: E(): 6.2e-31, 83.1% id in 89 aa and to Escherichia coli hypothetical protein YihD SW:YIHD_ECOLI (P32126) (89 aa) fasta scores: E(): 1.7e-28, 76.4% id in 89 aa | genbank | 16120367 | NP_403680.1 | 89 | 20443 | 20712 | |
| 200948 | hypothetical | YPO0014 | hypothetical protein Similar to Pectobacterium carotovorum subsp. cartovorum hypothetical protein YihE TR:Q9RB11 (EMBL:AF146615) (328 aa) fasta scores: E(): 0, 74.1% id in 328 aa and to Escherichia coli hypothetical YihE SW:YIHE_ECOLI (P32127) (328 aa) fasta scores: E(): 0, 66.2% id in 328 aa | genbank | 16120368 | NP_403681.1 | 328 | 20792 | 21778 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 200949 | dsbA | hypothetical | YPO0015 | secreted thiol:disulfide interchange protein DsbA Previously sequenced Yersinia pestis thiol:disulfide interchange protein DsbA SW:DSBA_YERPE (Q9XBV2) (207 aa) fasta scores: E(): 0, 100.0% id in 207 aa. Also highly similar to Erwinia carotovora thiol:disulfide interchange protein DsbA precursor SW:DSBA_ERWCA (Q9RB10) (207 aa) fasta scores: E(): 0, 81.6% id in 207 aa | genbank | 16120369 | NP_403682.1 | 207 | 21806 | 22429 |
| 200950 | polA | hypothetical | YPO0017 | DNA polymerase I has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair | genbank | 16120370 | NP_403683.1 | 932 | 22921 | 25719 |
| 200951 | tnp | hypothetical | YPO0018 | transposase for the IS1541 insertion element Similar to Salmonella typhimurium, and Salmonella typhi transposase for insertion sequence IS200 TnpA SW:T200_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 94.1% id in 152 aa. Also identical to the Yersinia pseudotuberculosis IS1541 element transposase Tnp TR:Q9X9F5 (EMBL:AJ238014) (152 aa) fasta scores: E(): 0, 100.0% id in 152 aa | genbank | 16120371 | NP_403684.1 | 152 | 26128 | 26586 |
| 200952 | hypothetical | YPO0019 | GTP-binding protein binds guanine nucleotides; depletion results in defective cell division | genbank | 16120372 | NP_403685.1 | 216 | 26838 | 27488 | |
| 200953 | hypothetical | YPO0020 | hypothetical protein Similar to Salmonella typhimurium hypothetical protein YihI SW:YIHI_SALTY (P37130) (171 aa) fasta scores: E(): 3.7e-26, 51.9% id in 183 aa | genbank | 16120373 | NP_403686.1 | 188 | 28233 | 28799 | |
| 200954 | hemN | hypothetical | YPO0021 | coproporphyrinogen III oxidase catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III | genbank | 16120374 | NP_403687.1 | 457 | 28982 | 30355 |
| 200955 | ntrC | hypothetical | YPO0022 | nitrogen regulation protein Highly similar to Escherichia coli nitrogen regulation protein NtrC SW:NTRC_ECOLI (P06713) (469 aa) fasta scores: E(): 0, 90.2% id in 470 aa | genbank | 16120375 | NP_403688.1 | 470 | 30409 | 31821 |
| 200956 | ntrB | hypothetical | YPO0023 | Two component regulatory protein involved in nitrogen assimilation Similar to Escherichia coli nitrogen regulation protein NtrB SW:NTRB_ECOLI (P06712) (349 aa) fasta scores: E(): 0, 86.5% id in 349 aa | genbank | 16120376 | NP_403689.1 | 349 | 31829 | 32878 |
| 200957 | glnA | hypothetical | YPO0024 | glutamine synthetase forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltran | genbank | 16120377 | NP_403690.1 | 469 | 33131 | 34540 |
| 200958 | hypothetical | YPO0025 | possible membrane protein Doubtful CDS, No significant database hits | genbank | 16120378 | NP_403691.1 | 52 | 34726 | 34884 | |
| 200959 | bipA | hypothetical | YPO0026 | putative GTPase Similar to Salmonella typhimurium GTPase BipA TR:CAC14270 (EMBL:AJ276889) (607 aa) fasta scores: E(): 0, 89.1% id in 606 aa and to Escherichia coli GTP-binding protein BipA which has shown to be important for virulence of EPEC strains. SW:TYPA_ECOLI (P32132) (591 aa) fasta scores: E(): 0, 89.3% id in 591 aa | genbank | 16120379 | NP_403692.1 | 607 | 35102 | 36925 |
| 200960 | hypothetical | YPO0027 | phosphatase Similar to Escherichia coli hypothetical protein YihX SW:YIHX_ECOLI (P32145) (199 aa) fasta scores: E(): 0, 67.2% id in 195 aa | genbank | 16120380 | NP_403693.1 | 196 | 37247 | 37837 | |
| 200961 | rbn | hypothetical | YPO0028 | ribonuclease BN RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease | genbank | 16120381 | NP_403694.1 | 294 | 37934 | 38818 |
| 200962 | hypothetical | YPO0029 | D-tyrosyl-tRNA deacylase Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine | genbank | 16120382 | NP_403695.1 | 145 | 38825 | 39262 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 200963 | hypothetical | YPO0030 | transposase/IS protein Similar to Escherichia coli insertion sequence IS21 putative ATP-binding protein, IstB SW:ISTB_ECOLI (P15026) (265 aa) fasta scores: E(): 0, 47.4% id in 249 aa. Also almost identical to Yersinia pestis and Escherichia coli putative IS100 transposase ypmt1.57c TR:Q9R3L5 (EMBL:AL117211) (260 aa) fasta scores: E(): 0, 99.6% id in 260 aa. | genbank | 16120383 | NP_403696.1 | 260 | 39336 | 40118 | |
| 200964 | hypothetical | YPO0031 | transposase for insertion sequence IS100 Similar to Escherichia coli transposase for insertion sequence element IS21 IstA SW:ISTA_ECOLI (P15025) (390 aa) fasta scores: E(): 3e-27, 33.1% id in 329 aa. Identical to the previously sequenced Yersinia pestis, Yersinia pseudotuberculosis, and Escherichia coli pesticin plasmid insertion sequence transposase Y1055 TR:P74993 (EMBL:U59875) (340 aa) fasta scores: E(): 0, 100.0% id in 340 aa | genbank | 16120384 | NP_403697.1 | 340 | 40115 | 41137 | |
| 200965 | hypothetical | YPO0032 | hypothetical protein Similar to Escherichia coli hypothetical protein YiiD SW:YIID_ECOLI (P32148) (329 aa) fasta scores: E(): 0, 83.9% id in 298 aa. Note lacks the first 16 amino acids of the E. coli orthologue. | genbank | 16120385 | NP_403698.1 | 307 | 41407 | 42330 | |
| 200966 | hypothetical | YPO0033 | possible exported protein Similar to Escherichia coli hypothetical protein YicH SW:YICH_ECOLI (P31433) (569 aa) fasta scores: E(): 0, 49.0% id in 563 aa | genbank | 16120386 | NP_403699.1 | 569 | 42465 | 44174 | |
| 200967 | hypothetical | YPO0034 | putative membrane permease Similar to Escherichia coli putative purine permease YicE SW:YICE_ECOLI (P27432) (463 aa) fasta scores: E(): 0, 84.0% id in 462 aa and to Vibrio cholerae xanthine/uracil permease family protein vc2712 TR:Q9KNM0 (EMBL:AE004337) (480 aa) fasta scores: E(): 0, 69.1% id in 450 aa | genbank | 16120387 | NP_403700.1 | 461 | 44322 | 45707 | |
| 200968 | gltS | hypothetical | YPO0035 | sodium/glutamate symport carrier protein Highly similar to Escherichia coli sodium/glutamate symport carrier protein GltS SW:GLTS_ECOLI (P19933) (401 aa) fasta scores: E(): 0, 82.5% id in 399 aa | genbank | 16120388 | NP_403701.1 | 404 | 45945 | 47159 |
| 200969 | recG | hypothetical | YPO0036 | ATP-dependent DNA helicase Similar to Escherichia coli ATP-dependent DNA helicase RecG SW:RECG_ECOLI (P24230) (693 aa) fasta scores: E(): 0, 81.5% id in 693 aa | genbank | 16120389 | NP_403702.1 | 693 | 47525 | 49606 |
| 200970 | trmH | hypothetical | YPO0037 | tRNA (guanosine-2'-O-)-methyltransferase Similar to Escherichia coli tRNA (guanosine-2'-O-)-methyltransferase, TrmH SW:TRMH_ECOLI (P19396) (229 aa) fasta scores: E(): 0, 82.8% id in 227 aa | genbank | 16120390 | NP_403703.1 | 230 | 49607 | 50299 |
| 200971 | spoT | hypothetical | YPO0038 | guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase Similar to Escherichia coli guanosine-3',5'-bis(diphosphate) 3'-pyrophosphydrolase, mediator of the stringent response, SpoT SW:SPOT_ECOLI (P17580) (702 aa) fasta scores: E(): 0, 91.3% id in 702 aa | genbank | 16120391 | NP_403704.1 | 702 | 50305 | 52413 |
| 200972 | rpoZ | hypothetical | YPO0039 | DNA-directed RNA polymerase omega subunit promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits | genbank | 16120392 | NP_403705.1 | 91 | 52433 | 52708 |
| 200973 | gmk | hypothetical | YPO0040 | guanylate kinase catalyzes the formation of GDP from ATP and GMP | genbank | 16120393 | NP_403706.1 | 207 | 52763 | 53386 |
| 200974 | hypothetical | YPO0041 | DNA ligase Similar to Chlamydia trachomatis DNA ligase LigA SW:DNLJ_CHLTR (O84148) (663 aa) fasta scores: E(): 3.1e-07, 24.0% id in 555 aa, and to Escherichia coli hypothetical protein YicF SW:YICF_ECOLI (P25772) (560 aa) fasta scores: E(): 0, 43.8% id in 564 aa | genbank | 16120394 | NP_403707.1 | 567 | 53787 | 55490 | |
| 200975 | hypothetical | YPO0042 | hypothetical protein Similar to Escherichia coli hypothetical protein YicG SW:YICG_ECOLI (P31432) (205 aa) fasta scores: E(): 0, 74.2% id in 182 aa and to Escherichia coli O157:H7 orf, hypothetical protein YicG TR:AAG58790 (EMBL:AE005592) (223 aa) fasta scores: E(): 0, 74.2% id in 182 aa | genbank | 16120395 | NP_403708.1 | 207 | 55503 | 56126 | |
| 200976 | hypothetical | YPO0043 | hypothetical protein Similar to Escherichia coli hypothetical protein YicC SW:YICC_ECOLI (P23839) (287 aa) fasta scores: E(): 0, 87.5% id in 287 aa | genbank | 16120396 | NP_403709.1 | 287 | 56529 | 57392 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 200977 | rph | hypothetical | YPO0044 | ribonuclease PH RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs | genbank | 16120397 | NP_403710.1 | 238 | 57519 | 58235 |
| 200978 | pyrE | hypothetical | YPO0045 | orotate phosphoribosyltransferase involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate | genbank | 16120398 | NP_403711.1 | 215 | 58402 | 59049 |
| 200979 | slmA | hypothetical | YPO0046 | nucleoid occlusion protein FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly | genbank | 16120399 | NP_403712.1 | 198 | 59184 | 59780 |
| 200980 | dut | hypothetical | YPO0047 | deoxyuridine 5'-triphosphate nucleotidohydrolase catalyzes the formation of dUMP from dUTP | genbank | 16120400 | NP_403713.1 | 151 | 59902 | 60357 |
| 200981 | dfp | hypothetical | YPO0048 | phosphopantothenoylcysteine synthase/decarboxylase catalyzes the conversion of 4'-phosphopantothenate to 4'-phosphopantetheine | genbank | 16120401 | NP_403714.1 | 405 | 60338 | 61555 |
| 200982 | radC | hypothetical | YPO0049 | DNA repair protein RadC Involved in repair of DNA damage after UV and X-ray irradiation in prokaryotes | genbank | 16120402 | NP_403715.1 | 222 | 61749 | 62417 |
| 200983 | rpmB | hypothetical | YPO0050 | 50S ribosomal protein L28 Required for 70S ribosome assembly | genbank | 16120403 | NP_403716.1 | 78 | 62680 | 62916 |
| 200984 | rpmG | hypothetical | YPO0051 | 50S ribosomal protein L33 A deletion mutation for this protein showed no difference from wild-type control on ribosome synthesis or function. The function of L33 is unknown | genbank | 16120404 | NP_403717.1 | 55 | 62928 | 63095 |
| 200985 | mutM | hypothetical | YPO0052 | formamidopyrimidine-DNA glycosylase Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases | genbank | 16120405 | NP_403718.1 | 269 | 63178 | 63987 |
| 200986 | coaD | hypothetical | YPO0053 | phosphopantetheine adenylyltransferase catalyzes the reversible formation of dephospho-CoA transfering the adenylyl group from ATP to 4'phosphopantetheine | genbank | 16120406 | NP_403719.1 | 159 | 63993 | 64472 |
| 200987 | kdtX | hypothetical | YPO0054 | lipopolysaccharide core biosynthesis glycosyl transferase Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SW:KDTX_SERMA (Q54435) (257 aa) fasta scores: E(): 0, 76.1% id in 259 aa and to Klebsiella pneumoniae lipopolysaccharide core biosynthesis glycosyl transferase WaaE SW:WAAE_KLEPN (Q9XC90) (258 aa) fasta scores: E(): 0, 70.6% id in 255 aa | genbank | 16120407 | NP_403720.1 | 260 | 64469 | 65251 |
| 200988 | kdtA | hypothetical | YPO0055 | 3-deoxy-D-manno-octulosonic-acid transferase Catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid | genbank | 16120408 | NP_403721.1 | 425 | 65252 | 66529 |
| 200989 | rfaC | hypothetical | YPO0056 | lipopolysaccharide heptosyltransferase-1 Similar to Escherichia coli lipopolysaccharide core biosynthesis heptosyltransferase-1 RfaC SW:RFAC_ECOLI (P24173) (319 aa) fasta scores: E(): 0, 68.3% id in 319 aa | genbank | 16120409 | NP_403722.1 | 321 | 66949 | 67914 |
| 200990 | rfaF | hypothetical | YPO0057 | ADP-heptose--LPS heptosyltransferase II Similar to Escherichia coli ADP-heptose--LPS heptosyltransferase II RfaF, involved in LPS core biosynthesis, SW:RFAF_ECOLI (P37692) (348 aa) fasta scores: E(): 0, 73.8% id in 347 aa | genbank | 16120410 | NP_403723.1 | 354 | 67914 | 68978 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 200991 | rfaD | hypothetical | YPO0058 | ADP-L-glycero-D-manno-heptose-6-epimerase Similar to Escherichia coli ADP-L-glycero-D-manno-heptose-6-epimerase RfaD, involved in lipopolysaccharide biosynthesis SW:RFAD_ECOLI (P17963) (310 aa) fasta scores: E(): 0, 83.1% id in 308 aa | genbank | 16120411 | NP_403724.1 | 310 | 69009 | 69941 |
| 200992 | kbl | hypothetical | YPO0059 | 2-amino-3-ketobutyrate coenzyme A ligase catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine | genbank | 16120412 | NP_403725.1 | 403 | 70187 | 71398 |
| 200993 | tdh | hypothetical | YPO0060 | L-threonine 3-dehydrogenase catalyzes the formation of 1,2-amino-3-oxobutanoate from threonine in threonine catabolism | genbank | 16120413 | NP_403726.1 | 341 | 71408 | 72433 |
| 200994 | hypothetical | YPO0063 | hypothetical protein Similar to many proteins of unknown function e.g. Escherichia coli hypothetical 46.6 kDa protein in secB-tdh intergenic region, YibP SW:YIBP_ECOLI (P37690) (419 aa) fasta scores: E(): 0, 63.2% id in 418 aa | genbank | 16120414 | NP_403727.1 | 450 | 73529 | 74881 | |
| 200995 | hypothetical | YPO0064 | phosphoglyceromutase catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate | genbank | 16120415 | NP_403728.1 | 515 | 74909 | 76456 | |
| 200996 | hypothetical | YPO0065 | hypothetical protein Similar to Escherichia coli hypothetical protein YibN SW:YIBN_ECOLI (P37688) (143 aa) fasta scores: E(): 0, 65.7% id in 143 aa | genbank | 16120416 | NP_403729.1 | 144 | 76853 | 77287 | |
| 200997 | grxC | hypothetical | YPO0066 | glutaredoxin Similar to Escherichia coli glutaredoxin 3 GrxC SW:GLR3_ECOLI (P37687) (82 aa) fasta scores: E(): 1.9e-27, 77.8% id in 81 aa | genbank | 16120417 | NP_403730.1 | 82 | 77406 | 77654 |
| 200998 | secB | hypothetical | YPO0067 | export protein SecB Similar to Escherichia coli protein-export protein SecB SW:SECB_ECOLI (P15040) (155 aa) fasta scores: E(): 0, 91.8% id in 158 aa | genbank | 16120418 | NP_403731.1 | 158 | 77742 | 78218 |
| 200999 | gpsA | hypothetical | YPO0068 | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate | genbank | 16120419 | NP_403732.1 | 339 | 78218 | 79237 |
| 201000 | hypothetical | YPO0069 | hypothetical protein No significant database hits | genbank | 16120420 | NP_403733.1 | 46 | 79297 | 79437 | |
| 201001 | cysE | hypothetical | YPO0070 | serine acetyltransferase Similar to Escherichia coli serine acetyltransferase CysE involved in cysteine biosynthesis SW:CYSE_ECOLI (P05796) (273 aa) fasta scores: E(): 0, 86.1% id in 273 aa | genbank | 16120421 | NP_403734.1 | 273 | 79503 | 80324 |
| 201002 | hypothetical | YPO0071 | putative methyltransferase Similar to Escherichia coli hypothetical tRNA/rRNA methyltransferase YibK SW:YIBK_ECOLI (P33899) (157 aa) fasta scores: E(): 0, 80.2% id in 162 aa and to Neisseria meningitidis RNA methyltransferase NMB0268 TR:Q9K199 (EMBL:AE002383) (154 aa) fasta scores: E(): 0, 61.0% id in 159 aa | genbank | 16120422 | NP_403735.1 | 162 | 80447 | 80935 | |
| 201003 | hypothetical | YPO0072 | bifunctional regulatory protein/DNA repair protein Similar to Escherichia coli Ada regulatory protein of the adaptive response, involved in DNA repair and global regulation SW:ADA_ECOLI (P06134) (354 aa) fasta scores: E(): 0, 52.8% id in 345 aa | genbank | 16120423 | NP_403736.1 | 354 | 81124 | 82188 | |
| 201004 | cpxA | hypothetical | YPO0073 | two-component sensor protein part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors | genbank | 16120424 | NP_403737.1 | 458 | 82237 | 83613 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201005 | cpxR | hypothetical | YPO0074 | two component system response regulatory protein Similar to Escherichia coli two component system response regulatory protein CpxR SW:CPXR_ECOLI (P16244) (232 aa) fasta scores: E(): 0, 89.7% id in 232 aa | genbank | 16120425 | NP_403738.1 | 232 | 83610 | 84308 |
| 201006 | cpxP | hypothetical | YPO0075 | hypothetical protein Similar to Escherichia coli periplasmic protein CpxP precursor involved in detoxification of extracytoplasmic proteins: SW:CPXP_ECOLI (P32158) (166 aa) fasta scores: E(): 6.8e-23, 52.5% id in 162 aa | genbank | 16120426 | NP_403739.1 | 162 | 84482 | 84970 |
| 201007 | hypothetical | YPO0076 | hypothetical protein Similar to Salmonella typhimurium hypothetical protein SW:YTL2_SALTY (P37415) (313 aa) fasta scores: E(): 0, 62.3% id in 308 aa and to Yersinia pestis putative transposase Y1072, located on plasmid pMT1, TR:O68786 (EMBL:AF074611) (328 aa) fasta scores: E(): 0, 59.0% id in 312 aa | genbank | 16120427 | NP_403740.1 | 319 | 85648 | 86607 | |
| 201008 | fieF | hypothetical | YPO0077 | ferrous iron efflux protein F member of cation diffusion facilitator family; membrane-bound; indcued by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers | genbank | 16120428 | NP_403741.1 | 300 | 87169 | 88071 |
| 201009 | pfkA | hypothetical | YPO0078 | 6-phosphofructokinase catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis | genbank | 16120429 | NP_403742.1 | 327 | 88289 | 89272 |
| 201010 | sbp1 | hypothetical | YPO0079 | exported sulfate-binding protein Similar to Escherichia coli sulfate-binding protein precursor Sbp involved in sulphate transport: SW:SUBI_ECOLI (P06997) (329 aa) fasta scores: E(): 0, 83.3% id in 329 aa | genbank | 16120430 | NP_403743.1 | 329 | 89493 | 90482 |
| 201011 | hypothetical | YPO0080 | hypothetical protein Weakly similar to Bacillus subtilis hypothetical protein YvgL TR:O32208 (EMBL:Z99121) (260 aa) fasta scores: E(): 4.5e-05, 22.6% id in 261 aa | genbank | 16120431 | NP_403744.1 | 272 | 90732 | 91550 | |
| 201012 | hypothetical | YPO0081 | putative membrane transport protein Similar to several including: Escherichia coli hypothetical 51.4 kDa protein YbhI SW:YBHI_ECOLI (P75763) (477 aa) fasta scores: E(): 0, 52.2% id in 477 aa, Arabidopsis thaliana 2-oxoglutarate/malate translocator protein TR:Q9LXV3 (EMBL:AL353013) (557 aa) fasta scores: E(): 0, 36.1% id in 465 aa and Neisseria meningitidis C4-dicarboxylate transporter NMB0470 TR:Q9K0U2 (EMBL:AE002404) (488 aa) fasta scores: E(): 0, 35.7% id in 479 aa | genbank | 16120432 | NP_403745.1 | 475 | 91626 | 93053 | |
| 201013 | hypothetical | YPO0082 | hypothetical protein Similar to Sphingomonas SPLB126 FldZ protein FldZ TR:Q9L3A1 (EMBL:AJ277295) (224 aa) fasta scores: E(): 0, 61.6% id in 224 aa and to Pseudomonas ochraceae 4-hydroxy-4-methyl-2-oxoglutarate aldolase ProA TR:BAB21456 (EMBL:AB050935) (227 aa) fasta scores: E(): 0, 57.8% id in 223 aa. Note residue 6 offers an alternative translation initiation site | genbank | 16120433 | NP_403746.1 | 237 | 93119 | 93832 | |
| 201014 | hypothetical | YPO0083 | hypothetical protein Weakly similar to several proteins e.g. Pyrococcus horikoshii hypothetical 31.6 kDa protein PH0499 TR:O58235 (EMBL:AP000002) (272 aa) fasta scores: E(): 1.8e-05, 25.5% id in 247 aa | genbank | 16120434 | NP_403747.1 | 310 | 93829 | 94761 | |
| 201015 | hypothetical | YPO0084 | possible transcriptional regulator Similar to several including: Sphingomonas sp LB126 protein FldY TR:Q9L3A2 (EMBL:AJ277295) (383 aa) fasta scores: E(): 3.1e-24, 32.1% id in 271 aa and to Agrobacterium radiobacter putative transcriptional regulator PcaQ TR:AAG27520 (EMBL:AF230648) (315 aa) fasta scores: E(): 2e-17, 27.0% id in 293 aa | genbank | 16120435 | NP_403748.1 | 348 | 94892 | 95938 | |
| 201016 | tpiA | hypothetical | YPO0085 | triosephosphate isomerase In the reaction catalyzed by triosephosphate isomerase, the three carbon ketone sugar dihydroxyacetone phosphate is rearranged (i.e. isomerized) to the three carbon aldehyde sugar, glyceraldehyde-3-phosphate. Under intracellular conditions, the reaction is | genbank | 16120436 | NP_403749.1 | 255 | 96170 | 96937 |
| 201017 | hypothetical | YPO0086 | hypothetical protein Similar in parts to Escherichia coli hypothetical 21.8 kDa protein in YiiQ SW:YIIQ_ECOLI (P32160) (199 aa) fasta scores: E(): 0, 55.9% id in 195 aa | genbank | 16120437 | NP_403750.1 | 211 | 97066 | 97701 | |
| 201018 | hypothetical | YPO0087 | hypothetical protein Similar to Escherichia coli hypothetical protein YiiR SW:YIIR_ECOLI (P32161) (146 aa) fasta scores: E(): 0, 66.7% id in 141 aa and to Escherichia coli O157:H7 putative cytochrome YhaH TR:AAG58236 (EMBL:AE005540) (121 aa) fasta scores: E(): 0.00022, 30.5% id in 131 aa | genbank | 16120438 | NP_403751.1 | 144 | 97849 | 98283 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201019 | fpr | hypothetical | YPO0088 | ferredoxin--NADP reductase Similar to Escherichia coli ferredoxin--NADP reductase Fpr SW:FENR_ECOLI (P28861) (247 aa) fasta scores: E(): 0, 74.1% id in 247 aa | genbank | 16120439 | NP_403752.1 | 248 | 98624 | 99370 |
| 201020 | glpF | hypothetical | YPO0091 | glycerol uptake facilitator protein Similar to Escherichia coli glycerol uptake facilitator protein GlpF SW:GLPF_ECOLI (P11244) (281 aa) fasta scores: E(): 0, 82.6% id in 282 aa | genbank | 16120440 | NP_403753.1 | 282 | 101532 | 102380 |
| 201021 | hypothetical | YPO0092 | hypothetical protein No significant database hits | genbank | 16120441 | NP_403754.1 | 79 | 102390 | 102629 | |
| 201022 | hypothetical | YPO0093 | hypothetical protein Similar to Escherichia coli hypothetical protein YiiU SW:YIIU_ECOLI (P32164) (81 aa) fasta scores: E(): 3.7e-19, 75.9% id in 79 aa | genbank | 16120442 | NP_403755.1 | 79 | 103008 | 103247 | |
| 201023 | tnp | hypothetical | YPO0094 | transposase for the IS1541 insertion element Similar to Salmonella typhimurium and Salmonella typhi transposase for insertion sequence IS200, TnpA, SW:TNPA_SALTY (Q57334) (152 aa) fasta scores: E(): 0, 93.4% id in 152 aa. Almost identical to the Yersinia pseudotuberculosis IS1541 element transposase Tnp TR:Q9X9F5 (EMBL:AJ238014) (152 aa) fasta scores: E(): 0, 99.3% id in 152 aa | genbank | 16120443 | NP_403756.1 | 152 | 103455 | 103913 |
| 201024 | hypothetical | YPO0096 | transposase/IS protein Similar to Escherichia coli insertion sequence IS21 putative ATP-binding protein, IstB SW:ISTB_ECOLI (P15026) (265 aa) fasta scores: E(): 0, 47.4% id in 249 aa. Identical to Yersinia pestis and Escherichia coli putative IS100 transposase ypmt1.57c TR:Q9R3L5 (EMBL:AL117211) (260 aa) fasta scores: E(): 0, 99.6% id in 260 aa. | genbank | 16120444 | NP_403757.1 | 260 | 105645 | 106427 | |
| 201025 | hypothetical | YPO0097 | transposase for insertion sequence IS100 Similar to Escherichia coli transposase for insertion sequence element IS21 IstA SW:ISTA_ECOLI (P15025) (390 aa) fasta scores: E(): 3e-27, 33.1% id in 329 aa. Identical to the previously sequenced Yersinia pestis, Yersinia pseudotuberculosis, and Escherichia coli pesticin plasmid insertion sequence transposase Y1055 TR:P74993 (EMBL:U59875) (340 aa) fasta scores: E(): 0, 100.0% id in 340 aa | genbank | 16120445 | NP_403758.1 | 340 | 106424 | 107446 | |
| 201026 | hypothetical | YPO0099 | hypothetical protein Similar to several members of the HlyD family of secretion proteins e.g. Escherichia coli colicin V secretion protein CvaA SW:CVAA_ECOLI (P22519) (413 aa) fasta scores: E(): 0, 47.1% id in 410 aa and to Escherichia coli MtfA TR:Q46972 (EMBL:U47048) (414 aa) fasta scores: E(): 0, 46.6% id in 410 aa | genbank | 16120446 | NP_403759.1 | 411 | 108358 | 109593 | |
| 201027 | hypothetical | YPO0100 | hypothetical protein no significant database hits | genbank | 16120447 | NP_403760.1 | 79 | 109863 | 110102 | |
| 201028 | hypothetical | YPO0101 | hypothetical protein Doubtful CDS with no significant database hits | genbank | 16120448 | NP_403761.1 | 49 | 110277 | 110426 | |
| 201029 | hypothetical | YPO0102 | hypothetical protein No significant database hits | genbank | 16120449 | NP_403762.1 | 194 | 110732 | 111316 | |
| 201030 | menG | hypothetical | YPO0103 | ribonuclease activity regulator protein RraA regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity | genbank | 16120450 | NP_403763.1 | 161 | 111433 | 111918 |
| 201031 | menA | hypothetical | YPO0104 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase, catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate | genbank | 16120451 | NP_403764.1 | 305 | 112060 | 112977 |
| 201032 | hslU | hypothetical | YPO0105 | ATP-dependent protease ATP-binding subunit heat shock protein involved in degradation of misfolded proteins | genbank | 16120452 | NP_403765.1 | 443 | 113213 | 114544 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 201033 | hslV | hypothetical | YPO0106 | ATP-dependent protease peptidase subunit heat shock protein involved indegradation of misfolded proteins | genbank | 16120453 | NP_403766.1 | 174 | 114615 | 115139 |