| Kingdom |
Category |
Genus/Species |
Count |
|
|
|
195 |
| Archaea |
|
|
14 |
| |
|
|
195 |
| |
Crenarchaeota |
|
1 |
| |
|
Pyrobaculum arsenaticum (pas) |
1 |
| |
Euryarchaeota |
|
13 |
| |
|
Archaeoglobus fulgidus (afu) |
1 |
| |
|
Haloarcula marismortui (hma) |
2 |
| |
|
Candidatus Methanoregula boonei (mbn) |
2 |
| |
|
Methanospirillum hungatei (mhu) |
1 |
| |
|
Methanosarcina mazei (mma) |
2 |
| |
|
Natronomonas pharaonis (nph) |
1 |
| |
|
Uncultured methanogenic archaeon RC-I (rci) |
4 |
| Bacteria |
|
|
2837 |
| |
Acidobacteria |
|
15 |
| |
|
Acidobacteria bacterium (aba) |
7 |
| |
|
Solibacter usitatus (sus) |
8 |
| |
Actinobacteria |
|
91 |
| |
|
Arthrobacter aurescens (aau) |
4 |
| |
|
Arthrobacter sp. FB24 (art) |
1 |
| |
|
Bifidobacterium longum DJO10A (blj) |
1 |
| |
|
Corynebacterium efficiens (cef) |
1 |
| |
|
Clavibacter michiganensis subsp. sepedonicus (cms) |
2 |
| |
|
Frankia alni (fal) |
1 |
| |
|
Frankia sp. CcI3 (fra) |
1 |
| |
|
Frankia sp. EAN1pec (fre) |
4 |
| |
|
Kineococcus radiotolerans (kra) |
3 |
| |
|
Leifsonia xyli xyli CTCB07 (lxx) |
2 |
| |
|
Mycobacterium abscessus ATCC 19977T (mab) |
1 |
| |
|
Mycobacterium avium 104 (mav) |
1 |
| |
|
Mycobacterium sp. JLS (mjl) |
5 |
| |
|
Mycobacterium sp. KMS (mkm) |
1 |
| |
|
Mycobacterium tuberculosis H37Ra (mra) |
1 |
| |
|
Mycobacterium smegmatis (msm) |
1 |
| |
|
Mycobacterium vanbaalenii (mva) |
2 |
| |
|
Nocardia farcinica (nfa) |
3 |
| |
|
Propionibacterium acnes (pac) |
1 |
| |
|
Rhodococcus sp. RHA1 (rha) |
3 |
| |
|
Rubrobacter xylanophilus (rxy) |
16 |
| |
|
Salinispora arenicola (saq) |
5 |
| |
|
Streptomyces coelicolor (sco) |
9 |
| |
|
Saccharopolyspora erythraea (sen) |
4 |
| |
|
Streptomyces griseus (sgr) |
5 |
| |
|
Streptomyces avermitilis (sma) |
6 |
| |
|
Salinispora tropica (stp) |
5 |
| |
|
Thermobifida fusca (tfu) |
2 |
| |
Bacteroides |
|
18 |
| |
|
Candidatus Amoebophilus asiaticus (aas) |
7 |
| |
|
Bacteroides fragilis NCTC9343 (bfs) |
1 |
| |
|
Cytophaga hutchinsonii (chu) |
2 |
| |
|
Flavobacterium johnsoniae (fjo) |
1 |
| |
|
Gramella forsetii (gfo) |
2 |
| |
|
Salinibacter ruber (sru) |
5 |
| |
Cyanobacteria |
|
78 |
| |
|
Acaryochloris marina (amr) |
23 |
| |
|
Anabaena sp. PCC7120 (ana) |
2 |
| |
|
Anabaena variabilis (ava) |
3 |
| |
|
Cyanobacteria Yellowstone A-Prime (cya) |
4 |
| |
|
Cyanobacteria Yellowstone B-Prime (cyb) |
5 |
| |
|
Cyanothece sp. ATCC 51142 (cyt) |
15 |
| |
|
Gloeobacter violaceus (gvi) |
8 |
| |
|
Microcystis aeruginosa (mar) |
1 |
| |
|
Nostoc punctiforme (npu) |
7 |
| |
|
Synechococcus sp. CC9605 (syd) |
2 |
| |
|
Synechococcus elongatus PCC7942 (syf) |
2 |
| |
|
Synechocystis sp. PCC6803 (syn) |
1 |
| |
|
Synechococcus sp. PCC7002 (syp) |
2 |
| |
|
Thermosynechococcus elongatus (tel) |
1 |
| |
|
Trichodesmium erythraeum (ter) |
2 |
| |
Deinococcus-Thermus |
|
2124 |
| |
|
Deinococcus radiodurans (dra) |
2011 |
| |
|
Thermus thermophilus HB27 (tth) |
41 |
| |
|
Thermus thermophilus HB8 (ttj) |
72 |
| |
Firmicutes |
|
85 |
| |
|
Alkaliphilus metalliredigens (amt) |
1 |
| |
|
Bacillus anthracis Sterne (bat) |
1 |
| |
|
Bacillus amyloliquefaciens (bay) |
2 |
| |
|
Bacillus cereus ATCC 14579 (bce) |
2 |
| |
|
Bacillus clausii (bcl) |
3 |
| |
|
Bacillus cereus subsp. cytotoxis NVH 391-98 (bcy) |
2 |
| |
|
Bacillus cereus ZK (bcz) |
1 |
| |
|
Bacillus halodurans (bha) |
3 |
| |
|
Bacillus licheniformis DSM13 (bld) |
3 |
| |
|
Bacillus weihenstephanensis (bwe) |
2 |
| |
|
Clostridium beijerinckii (cbe) |
1 |
| |
|
Clostridium botulinum B Eklund 17B (cbk) |
1 |
| |
|
Carboxydothermus hydrogenoformans (chy) |
2 |
| |
|
Clostridium perfringens SM101 (cpr) |
1 |
| |
|
Clostridium phytofermentans (cpy) |
1 |
| |
|
Clostridium tetani E88 (ctc) |
1 |
| |
|
Candidatus Desulforudis audaxviator (dau) |
7 |
| |
|
Desulfotomaculum reducens (drm) |
3 |
| |
|
Desulfitobacterium hafniense (dsy) |
1 |
| |
|
Exiguobacterium sibiricum (esi) |
3 |
| |
|
Geobacillus kaustophilus (gka) |
7 |
| |
|
Geobacillus thermodenitrificans (gtn) |
4 |
| |
|
Heliobacterium modesticaldum (hmo) |
2 |
| |
|
Listeria innocua (lin) |
2 |
| |
|
Lysinibacillus sphaericus (lsp) |
2 |
| |
|
Moorella thermoacetica (mta) |
4 |
| |
|
Natranaerobius thermophilus (nth) |
1 |
| |
|
Oceanobacillus iheyensis (oih) |
2 |
| |
|
Pelotomaculum thermopropionicum (pth) |
2 |
| |
|
Staphylococcus aureus Newman (sae) |
1 |
| |
|
Staphylococcus aureus MRSA252 (sar) |
1 |
| |
|
Streptococcus pyogenes MGAS2096 (serotype M3) (spj) |
1 |
| |
|
Streptococcus pyogenes MGAS9429 (serotype M3) (spk) |
2 |
| |
|
Streptococcus suis 05ZYH33 (ssu) |
1 |
| |
|
Symbiobacterium thermophilum (sth) |
8 |
| |
|
Thermoanaerobacter pseudethanolicus (tpd) |
2 |
| |
|
Thermoanaerobacter tengcongensis (tte) |
2 |
| |
Green nonsulfur bacteria |
|
70 |
| |
|
Chloroflexus aurantiacus (cau) |
14 |
| |
|
Dehalococcoides ethenogenes (det) |
1 |
| |
|
Herpetosiphon aurantiacus (hau) |
25 |
| |
|
Roseiflexus castenholzii DSM13941 (rca) |
12 |
| |
|
Roseiflexus sp. RS-1 (rrs) |
18 |
| |
Green sulfur bacteria |
|
7 |
| |
|
Chlorobium phaeobacteroides BS1 (cpb) |
1 |
| |
|
Chlorobaculum tepidum (cte) |
3 |
| |
|
Chloroherpeton thalassium (cts) |
1 |
| |
|
Pelodictyon luteolum (plt) |
1 |
| |
|
Pelodictyon phaeoclathratiforme (pph) |
1 |
| |
Hyperthermophilic bacteria |
|
5 |
| |
|
Thermotoga maritima (tma) |
2 |
| |
|
Thermotoga petrophila (tpt) |
1 |
| |
|
Thermotoga sp. RQ2 (trq) |
1 |
| |
|
Thermodesulfovibrio yellowstonii (tye) |
1 |
| |
Proteobacteria |
|
325 |
| |
|
Acidovorax avenae (aav) |
1 |
| |
|
Alcanivorax borkumensis (abo) |
1 |
| |
|
Acinetobacter baumannii AYE (aby) |
1 |
| |
|
Acidiphilium cryptum JF-5 (acr) |
7 |
| |
|
Anaeromyxobacter dehalogenans (ade) |
4 |
| |
|
Alkalilimnicola ehrlichei (aeh) |
2 |
| |
|
Acidithiobacillus ferrooxidans (afe) |
1 |
| |
|
Anaeromyxobacter sp. Fw109-5 (afw) |
3 |
| |
|
Aeromonas hydrophila (aha) |
2 |
| |
|
Acidovorax sp. JS42 (ajs) |
4 |
| |
|
Alteromonas macleodii (amc) |
1 |
| |
|
Anaeromyxobacter sp. K (ank) |
7 |
| |
|
Actinobacillus pleuropneumoniae L20 (serotype 5b) (apl) |
2 |
| |
|
Agrobacterium tumefaciens C58 (Cereon) (atc) |
4 |
| |
|
Azorhizobium caulinodans (azc) |
2 |
| |
|
Burkholderia ambifaria MC40-6 (bac) |
2 |
| |
|
Burkholderia cepacia (bam) |
1 |
| |
|
Bordetella avium (bav) |
1 |
| |
|
Bdellovibrio bacteriovorus (bba) |
1 |
| |
|
Bradyrhizobium sp. BTAi1 (bbt) |
5 |
| |
|
Burkholderia cenocepacia HI2424 (bch) |
1 |
| |
|
Burkholderia cenocepacia J2315 (bcj) |
1 |
| |
|
Beijerinckia indica (bid) |
3 |
| |
|
Bradyrhizobium japonicum (bja) |
4 |
| |
|
Brucella abortus S19 (bmc) |
1 |
| |
|
Bordetella parapertussis (bpa) |
1 |
| |
|
Burkholderia phymatum (bph) |
4 |
| |
|
Burkholderia pseudomallei K96243 (bps) |
2 |
| |
|
Burkholderia phytofirmans (bpy) |
1 |
| |
|
Bradyrhizobium sp. ORS278 (bra) |
2 |
| |
|
Burkholderia thailandensis (bte) |
3 |
| |
|
Burkholderia sp. 383 (bur) |
3 |
| |
|
Burkholderia vietnamiensis (bvi) |
2 |
| |
|
Burkholderia xenovorans (bxe) |
5 |
| |
|
Caulobacter sp. K31 (cak) |
7 |
| |
|
Caulobacter crescentus (ccr) |
1 |
| |
|
Colwellia psychrerythraea (cps) |
1 |
| |
|
Chromohalobacter salexigens (csa) |
4 |
| |
|
Cupriavidus taiwanensis (cti) |
1 |
| |
|
Chromobacterium violaceum (cvi) |
11 |
| |
|
Delftia acidovorans (dac) |
4 |
| |
|
Desulfovibrio desulfuricans (dde) |
1 |
| |
|
Candidatus Desulfococcus oleovorans (dol) |
1 |
| |
|
Desulfotalea psychrophila (dps) |
1 |
| |
|
Dinoroseobacter shibae (dsh) |
1 |
| |
|
Desulfovibrio vulgaris DP4 (dvl) |
1 |
| |
|
Desulfovibrio vulgaris Hildenborough (dvu) |
2 |
| |
|
Azoarcus sp. EbN1 (eba) |
4 |
| |
|
Erythrobacter litoralis (eli) |
1 |
| |
|
Enterobacter sp. 638 (ent) |
1 |
| |
|
Enterobacter sakazakii (esa) |
2 |
| |
|
Geobacter bemidjiensis (gbm) |
2 |
| |
|
Gluconacetobacter diazotrophicus (gdi) |
2 |
| |
|
Geobacter metallireducens (gme) |
1 |
| |
|
Gluconobacter oxydans (gox) |
1 |
| |
|
Geobacter sulfurreducens (gsu) |
1 |
| |
|
Geobacter uraniumreducens (gur) |
2 |
| |
|
Herminiimonas arsenicoxydans (har) |
1 |
| |
|
Hahella chejuensis (hch) |
3 |
| |
|
Hyphomonas neptunium (hne) |
1 |
| |
|
Legionella pneumophila Paris (lpp) |
2 |
| |
|
Magnetospirillum magneticum (mag) |
1 |
| |
|
Marinobacter aquaeolei (maq) |
2 |
| |
|
Methylococcus capsulatus (mca) |
2 |
| |
|
Mesorhizobium sp. BNC1 (mes) |
2 |
| |
|
Methylobacterium sp. 4-46 (met) |
4 |
| |
|
Methylobacterium extorquens (mex) |
3 |
| |
|
Methylobacillus flagellatus (mfa) |
3 |
| |
|
Mesorhizobium loti (mlo) |
7 |
| |
|
Maricaulis maris (mmr) |
1 |
| |
|
Minibacterium massiliensis (mms) |
3 |
| |
|
Methylobacterium populi (mpo) |
3 |
| |
|
Methylibium petroleiphilum (mpt) |
2 |
| |
|
Mannheimia succiniciproducens (msu) |
1 |
| |
|
Myxococcus xanthus (mxa) |
6 |
| |
|
Nitrosomonas eutropha (net) |
1 |
| |
|
Nitrobacter hamburgensis (nha) |
1 |
| |
|
Nitrosococcus oceani (noc) |
1 |
| |
|
Ochrobactrum anthropi (oan) |
3 |
| |
|
Pseudomonas aeruginosa PA7 (pap) |
2 |
| |
|
Psychrobacter arcticum (par) |
1 |
| |
|
Pseudoalteromonas atlantica (pat) |
3 |
| |
|
Pseudomonas aeruginosa UCBPP-PA14 (pau) |
1 |
| |
|
Pelobacter carbinolicus (pca) |
1 |
| |
|
Paracoccus denitrificans (pde) |
3 |
| |
|
Pseudomonas entomophila (pen) |
1 |
| |
|
Pseudomonas fluorescens Pf-5 (pfl) |
3 |
| |
|
Parvibaculum lavamentivorans (pla) |
2 |
| |
|
Proteus mirabilis (pmr) |
1 |
| |
|
Pseudomonas mendocina (pmy) |
8 |
| |
|
Polaromonas sp. JS666 (pol) |
3 |
| |
|
Pelobacter propionicus (ppd) |
1 |
| |
|
Pseudomonas putida F1 (ppf) |
1 |
| |
|
Pseudomonas putida GB-1 (ppg) |
3 |
| |
|
Photobacterium profundum (ppr) |
1 |
| |
|
Pseudomonas putida KT2440 (ppu) |
1 |
| |
|
Pseudomonas stutzeri (psa) |
1 |
| |
|
Pseudomonas syringae pv. syringae B728a (psb) |
1 |
| |
|
Pseudomonas syringae pv. tomato DC3000 (pst) |
1 |
| |
|
Rhizobium etli CIAT 652 (rec) |
1 |
| |
|
Ralstonia eutropha JMP134 (reu) |
3 |
| |
|
Rhodoferax ferrireducens (rfr) |
7 |
| |
|
Rhizobium leguminosarum (rle) |
4 |
| |
|
Ralstonia metallidurans (rme) |
2 |
| |
|
Rhodopseudomonas palustris HaA2 (rpb) |
1 |
| |
|
Rhodopseudomonas palustris BisA53 (rpe) |
2 |
| |
|
Ralstonia pickettii (rpi) |
1 |
| |
|
Rhodopseudomonas palustris TIE-1 (rpt) |
1 |
| |
|
Rhodospirillum rubrum (rru) |
2 |
| |
|
Rhodobacter sphaeroides ATCC 17029 (rsh) |
1 |
| |
|
Ralstonia solanacearum (rso) |
9 |
| |
|
Rhodobacter sphaeroides 2.4.1 (rsp) |
1 |
| |
|
Sphingopyxis alaskensis (sal) |
2 |
| |
|
Syntrophus aciditrophicus (sat) |
1 |
| |
|
Shewanella amazonensis (saz) |
2 |
| |
|
Sorangium cellulosum (scl) |
8 |
| |
|
Salmonella enterica subsp. enterica serovar Newport (see) |
1 |
| |
|
Syntrophobacter fumaroxidans (sfu) |
1 |
| |
|
Shigella flexneri 2457T (serotype 2a) (sfx) |
4 |
| |
|
Shewanella sp. W3-18-1 (shw) |
1 |
| |
|
Silicibacter pomeroyi (sil) |
3 |
| |
|
Sinorhizobium meliloti (sme) |
6 |
| |
|
Stenotrophomonas maltophilia (sml) |
2 |
| |
|
Stenotrophomonas maltophilia R551-3 (smt) |
1 |
| |
|
Serratia proteamaculans (spe) |
1 |
| |
|
Sulfurovum sp. NBC37-1 (sun) |
1 |
| |
|
Sphingomonas wittichii (swi) |
3 |
| |
|
Thiobacillus denitrificans (tbd) |
2 |
| |
|
Vibrio cholerae O395 (vco) |
1 |
| |
|
Verminephrobacter eiseniae (vei) |
8 |
| |
|
Vibrio vulnificus CMCP6 (vvu) |
1 |
| |
|
Xanthomonas axonopodis (xac) |
2 |
| |
|
Xanthobacter autotrophicus (xau) |
4 |
| |
|
Xanthomonas campestris pv. vesicatoria (xcv) |
3 |
| |
|
Xylella fastidiosa 9a5c (xfa) |
1 |
| |
|
Yersinia pseudotuberculosis PB1/+ (ypb) |
1 |
| |
Spirochete |
|
2 |
| |
|
Leptospira biflexa serovar Patoc Patoc 1 (Ames) (lbf) |
2 |
| |
Synergistetes |
|
1 |
| |
|
Caldicellulosiruptor saccharolyticus (csc) |
1 |
| |
Verrucomicrobia |
|
16 |
| |
|
Methylacidiphilum infernorum (min) |
2 |
| |
|
Opitutus terrae (ote) |
14 |
| Eukaryotes |
|
|
16 |
| |
Animals |
|
8 |
| |
|
Caenorhabditis briggsae (cbr) |
1 |
| |
|
Drosophila ananassae (dan) |
1 |
| |
|
Mus musculus (mouse) (mmu) |
1 |
| |
|
Ornithorhynchus anatinus (platypus) (oaa) |
3 |
| |
|
Rattus norvegicus (rat) (rno) |
1 |
| |
|
Sus scrofa (pig) (ssc) |
1 |
| |
Fungi |
|
3 |
| |
|
Aspergillus fumigatus (afm) |
1 |
| |
|
Ashbya gossypii (Eremothecium gossypii) (ago) |
1 |
| |
|
Schizosaccharomyces pombe (spo) |
1 |
| |
Plants |
|
1 |
| |
|
Physcomitrella patens subsp. patens (ppp) |
1 |
| |
Protists |
|
4 |
| |
|
Leishmania major (lma) |
2 |
| |
|
Trypanosoma cruzi (tcr) |
1 |
| |
|
Trichomonas vaginalis (tva) |
1 |
| NULL |
|
|
0 |
| TOTAL |
|
|
3062 |
![[space]](http://compbio.ornl.gov/public/images/bluespacer.gif){kind=small}
![[space]](http://maple.lsd.ornl.gov/common/images/bluespacer.gif){kind=small}