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An organized view of the transcripome



Library:18893 (dbEST ID)

Human liver regeneration after partial hepatectomy

Library Description

Organism:Homo sapiens
Tissue:liver

Source: Cun-Shuan Xu, Henan Normal University

Gene Content Analysis

31,859 ESTs from this library were grouped into 7,122 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs TPM   UniGene Entry
7299 229103 Hs.642877 Metastasis associated lung adenocarcinoma transcript 1 (non-protein coding).
852 26743 Hs.586920 Transcribed locus, strongly similar to NP_001090497.1 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Xenopus laevis].
206 6466 Hs.46423 Histone cluster 1, H4c.
179 5619 Hs.613068 Hypothetical LOC645553.
154 4834 Hs.709313 Beta-2-microglobulin.
154 4834 Hs.194718 Zinc finger, RAN-binding domain containing 2.
148 4645 Hs.250666 Hairy and enhancer of split 1, (Drosophila).
142 4457 Hs.446574 Thymosin beta 10.
126 3955 Hs.177530 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit.
116 3641 Hs.522584 Thymosin beta 4, X-linked.
96 3013 Hs.499839 Ribosomal protein L7a.
95 2982 Hs.647371 Metallothionein 2A.
95 2982 Hs.632717 Myosin, light chain 6, alkali, smooth muscle and non-muscle.
92 2888 Hs.178551 Ribosomal protein L8.
71 2229 Hs.469473 Ribosomal protein L31.
70 2197 Hs.643910 SRY (sex determining region Y)-box 4.
70 2197 Hs.436657 Clusterin.
66 2072 Hs.182825 Ribosomal protein L35.
65 2040 Hs.424126 Small EDRK-rich factor 2.
63 1977 Hs.517262 SON DNA binding protein.
63 1977 Hs.408054 Ribosomal protein L12.
61 1915 Hs.633929 Hypothetical protein LOC100132564.
61 1915 Hs.433701 Ribosomal protein L37a.
60 1883 Hs.654475 Ribosomal protein S27.
59 1852 Hs.703824 Transcribed locus, weakly similar to XP_001715638.1 PREDICTED: hypothetical protein [Homo sapiens].
59 1852 Hs.512675 Ribosomal protein S8.
59 1852 Hs.162877 ADP-ribosylation factor GTPase activating protein 3.
58 1821 Hs.275243 S100 calcium binding protein A6.
57 1789 Hs.85539 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E.
56 1758 Hs.523185 Ribosomal protein L13a.
55 1726 Hs.356766 Chromosome 20 open reading frame 199.
52 1632 Hs.438429 Ribosomal protein S19.
50 1569 Hs.615092 Nucleolar and spindle associated protein 1.
50 1569 Hs.130293 Cisplatin resistance-associated overexpressed protein.
49 1538 Hs.459927 Prothymosin, alpha.
49 1538 Hs.356502 Ribosomal protein, large, P1.
48 1507 Hs.546291 Ribosomal protein S27.
46 1444 Hs.567385 Protein regulator of cytokinesis 1.
46 1444 Hs.533732 Signal recognition particle 14kDa (homologous Alu RNA binding protein).
46 1444 Hs.440475 Succinate dehydrogenase complex, subunit A, flavoprotein (Fp).
45 1412 Hs.654444 S100 calcium binding protein A4.
45 1412 Hs.596078 High-mobility group box 1.
45 1412 Hs.523463 Ribosomal protein L27a.
45 1412 Hs.497741 Centromere protein F, 350/400ka (mitosin).
45 1412 Hs.435136 Thioredoxin.
44 1381 Hs.527193 Ribosomal protein S23.
42 1318 Hs.5662 Guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1.
42 1318 Hs.28491 Spermidine/spermine N1-acetyltransferase 1.
40 1256 Hs.610947 Transcribed locus, strongly similar to XP_001516585.1 PREDICTED: similar to predicted protein, partial [Ornithorhynchus anatinus].
40 1256 Hs.546286 Ribosomal protein S3.
40 1256 Hs.532790 N-myristoyltransferase 1.
40 1256 Hs.520348 Ubiquitin C.
40 1256 Hs.419463 Ribosomal protein L23a.
40 1256 Hs.410817 Ribosomal protein L13.
40 1256 Hs.356331 Peptidylprolyl isomerase A (cyclophilin A).
40 1256 Hs.156367 Ribosomal protein S29.
39 1224 Hs.520640 Actin, beta.
39 1224 Hs.517145 Enolase 1, (alpha).
39 1224 Hs.437594 Ribosomal protein, large, P2.
39 1224 Hs.220864 Chromodomain helicase DNA binding protein 2.
38 1193 Hs.703599 Transcribed locus, strongly similar to XP_001231536.1 PREDICTED: similar to Ac1147 [Gallus gallus].
38 1193 Hs.335918 Farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase).
36 1130 Hs.655550 Transcribed locus, strongly similar to NP_001004379.1 ribosomal protein L7a [Gallus gallus].
36 1130 Hs.494614 BAT2 domain containing 1.
36 1130 Hs.180909 Peroxiredoxin 1.
35 1099 Hs.675710 Transcribed locus, strongly similar to XP_001713861.1 PREDICTED: hypothetical protein [Homo sapiens].
35 1099 Hs.524219 Triosephosphate isomerase 1.
35 1099 Hs.433670 Ferritin, light polypeptide.
35 1099 Hs.381123 Ribosomal protein L21.
34 1067 Hs.716582 Transcribed locus, strongly similar to XP_001516585.1 PREDICTED: similar to predicted protein, partial [Ornithorhynchus anatinus].
34 1067 Hs.593027 CDNA FLJ26120 fis, clone SYN00419.
34 1067 Hs.433529 Ribosomal protein S11.
34 1067 Hs.211602 Structural maintenance of chromosomes 1A.
33 1036 Hs.512676 Ribosomal protein S25.
33 1036 Hs.233952 Proteasome (prosome, macropain) subunit, alpha type, 7.
33 1036 Hs.15535 Ribosomal protein L11.
32 1004 Hs.524910 Ferritin, heavy polypeptide 1.
32 1004 Hs.438227 Ribosomal protein L34.
32 1004 Hs.171626 S-phase kinase-associated protein 1.
32 1004 Hs.119192 H2A histone family, member Z.
31 973 Hs.5308 Ubiquitin A-52 residue ribosomal protein fusion product 1.
31 973 Hs.528668 Ribosomal protein L6.
31 973 Hs.349283 Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
30 942 Hs.89643 Transketolase.
30 942 Hs.591283 Arginine/serine-rich coiled-coil 1.
30 942 Hs.155827 Golgi autoantigen, golgin subfamily a, 2.
29 910 Hs.80545 Ribosomal protein L37.
29 910 Hs.533287 WW domain binding protein 5.
29 910 Hs.481980 Disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila).
29 910 Hs.458418 KIAA1731.
29 910 Hs.436186 Calpastatin.
29 910 Hs.182982 Golgi autoantigen, golgin subfamily a, 8A.
29 910 Hs.180877 H3 histone, family 3B (H3.3B).
28 879 Hs.646318 Protein immuno-reactive with anti-PTH polyclonal antibodies.
28 879 Hs.544577 Glyceraldehyde-3-phosphate dehydrogenase.
28 879 Hs.534330 Metallothionein 1E.
28 879 Hs.523789 Non-protein coding RNA 84.
28 879 Hs.489201 Split hand/foot malformation (ectrodactyly) type 1.
28 879 Hs.18192 Serine/arginine repetitive matrix 1.
27 847 Hs.380118 RNA binding motif protein, X-linked.

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Source: NCBI UniGene

EST Sequences

60,458 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

  • liver
  • normal
  • unknown developmental stage
  • uncharacterized preparation

Source: NCBI Clone Registry



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