R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 1223 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|585783|sp|P38548|RAN_VICFA GTP-BINDING NUCLEAR PROTEIN RAN/TC4
>gi|1076544|pir||S46498 GTP-binding protein ran homolog - fava bean
>gi|395072|emb|CAA80845.1| (Z24678) guanine nucleotide regulatory
protein [Vicia faba]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 10..157
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 158..220
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..205
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..217
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|585777|sp|P38546|RAN1_LYCES GTP-BINDING NUCLEAR PROTEIN RAN1
>gi|453561|gb|AAC37402.1| (L28713) Ran protein/TC4 protein
[Lycopersicon esculentum]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 14..57
BLOCKS BL01115B: GTP-binding nuclear protein ra 94..137
BLOCKS BL01115C: GTP-binding nuclear protein ra 143..173
BLOCKS BL01115D: GTP-binding nuclear protein ra 187..218
DOMO DM00006: RASTRANSFORMINGPROTEIN 10..157
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 158..220
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..194
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..217
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|585778|sp|P38547|RAN2_LYCES GTP-BINDING NUCLEAR PROTEIN RAN2
>gi|453563|gb|AAC37403.1| (L28714) Ran protein/TC4 protein
[Lycopersicon esculentum] >gi|453565|gb|AAC37404.1| (L28715) Ran
protein/TC4 protein [Lycopersicon esculentum]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 14..57
BLOCKS BL01115B: GTP-binding nuclear protein ra 94..137
BLOCKS BL01115C: GTP-binding nuclear protein ra 143..173
BLOCKS BL01115D: GTP-binding nuclear protein ra 187..218
DOMO DM00006: RASTRANSFORMINGPROTEIN 10..157
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 158..220
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..209
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..217
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|1172833|sp|P41916|RAN1_ARATH GTP-BINDING NUCLEAR PROTEIN RAN-1
>gi|495729|gb|AAA32851.1| (L16789) small ras-related protein
[Arabidopsis thaliana] >gi|2058278|emb|CAA66047.1| (X97379) atran1
[Arabidopsis thaliana]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 14..57
BLOCKS BL01115B: GTP-binding nuclear protein ra 94..137
BLOCKS BL01115C: GTP-binding nuclear protein ra 143..173
BLOCKS BL01115D: GTP-binding nuclear protein ra 187..218
DOMO DM00006: RASTRANSFORMINGPROTEIN 10..157
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 158..220
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..205
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..218
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|1172836|sp|P41919|RANB_TOBAC GTP-BINDING NUCLEAR PROTEIN RAN-B1
>gi|496272|gb|AAA34109.1| (L16787) small ras-related protein
[Nicotiana tabacum]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 14..57
BLOCKS BL01115B: GTP-binding nuclear protein ra 94..137
BLOCKS BL01115C: GTP-binding nuclear protein ra 143..173
BLOCKS BL01115D: GTP-binding nuclear protein ra 187..218
DOMO DM00006: RASTRANSFORMINGPROTEIN 10..157
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 158..220
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..212
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..217
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|2507281|sp|P41917|RAN2_ARATH GTP-BINDING NUCLEAR PROTEIN RAN-2
>gi|1668706|emb|CAA66048.1| (X97380) atran2 [Arabidopsis thaliana]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 14..57
BLOCKS BL01115B: GTP-binding nuclear protein ra 94..137
BLOCKS BL01115C: GTP-binding nuclear protein ra 143..173
BLOCKS BL01115D: GTP-binding nuclear protein ra 187..218
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..200
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..217
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|2149051|gb|AAB58478.1| (U73810) small Ras-like GTP-binding protein
[Arabidopsis thaliana] >gi|9758116|dbj|BAB08588.1| (AB010071) small
Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|10334503|emb|CAC10213.1| (AJ299064) GTP-binding protein [Cicer arietinum]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.2e-82, Sum P(2) = 5.2e-82
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|12382026|dbj|BAB21295.1| (AP002844) putative GTP-binding protein [Oryza
sativa]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 711 (250.3 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 127/129 (98%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYE+SA
Sbjct: 146 NLQYYEVSA 154
Score = 136 (47.9 bits), Expect = 1.4e-81, Sum P(2) = 1.4e-81
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|2058280|emb|CAA66049.1| (X97381) atran3 [Arabidopsis thaliana]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 705 (248.2 bits), Expect = 5.9e-81, Sum P(2) = 5.9e-81
Identities = 128/129 (99%), Positives = 128/129 (99%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGE EKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEPEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 136 (47.9 bits), Expect = 5.9e-81, Sum P(2) = 5.9e-81
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|1172835|sp|P41918|RANA_TOBAC GTP-BINDING NUCLEAR PROTEIN RAN-A1
>gi|496268|gb|AAA73563.1| (L16767) GTP-binding protein [Nicotiana
tabacum]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 14..57
BLOCKS BL01115B: GTP-binding nuclear protein ra 94..137
BLOCKS BL01115C: GTP-binding nuclear protein ra 143..173
BLOCKS BL01115D: GTP-binding nuclear protein ra 187..218
DOMO DM00006: RASTRANSFORMINGPROTEIN 10..157
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 158..220
Entrez np-binding site: GTP (BY SIMILARITY). 20..27
Entrez np-binding site: GTP (BY SIMILARITY). 68..72
Entrez np-binding site: GTP (BY SIMILARITY). 125..128
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 130..145
PFAM ras: Ras family 15..210
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 14..35
PRINTS 1: RAN family motif I - 2 27..41
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 37..53
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 55..77
PRINTS 2: RAN family motif II - 2 74..92
PRINTS 3: RAN family motif III - 2 94..115
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 116..129
PRINTS 4: RAN family motif IV - 2 130..148
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 149..171
PRINTS 5: RAN family motif V - 2 168..190
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 14..170
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 173..217
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 20..27
PROSITE RAN: GTP-binding nuclear protein ran sig 68..83
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 7.5e-81, Sum P(2) = 7.5e-81
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 125 (44.0 bits), Expect = 7.5e-81, Sum P(2) = 7.5e-81
Identities = 24/26 (92%), Positives = 24/26 (92%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALP QQ VDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPGQQAVDYPSFKLVIVGDGGTGK 26
>gi|5360230|dbj|BAA81911.1| (AB015287) Ran [Oryza sativa]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 704 (247.8 bits), Expect = 4.1e-80, Sum P(2) = 4.1e-80
Identities = 127/129 (98%), Positives = 128/129 (99%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDF TNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 86 GQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 145
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 146 NLQYYEISA 154
Score = 129 (45.4 bits), Expect = 4.1e-80, Sum P(2) = 4.1e-80
Identities = 25/26 (96%), Positives = 25/26 (96%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQ TVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQGTVDYPSFKLVIVGDGGTGK 26
>gi|2801433|gb|AAB97312.1| (AF017991) salt stress inducible small GTP binding
protein Ran1 homolog [Arabidopsis thaliana]
>gi|3559764|gb|AAC34900.1| (U75601) unknown [Arabidopsis thaliana]
Length = 221
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 221
0 50 100 150 200
Plus Strand HSPs:
Score = 695 (244.7 bits), Expect = 6.6e-80, Sum P(2) = 6.6e-80
Identities = 125/129 (96%), Positives = 127/129 (98%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHP DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 26 KTTFVKRHLTGEFEKKYEPTIGVEVHPPDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTY+NVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRK+
Sbjct: 86 GQCAIIMFDVTARLTYRNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKE 145
Query: 507 NLQYYEISA 533
LQYYEISA
Sbjct: 146 ELQYYEISA 154
Score = 136 (47.9 bits), Expect = 6.6e-80, Sum P(2) = 6.6e-80
Identities = 26/26 (100%), Positives = 26/26 (100%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQTVDYPSFKLVIVGDGGTGK
Sbjct: 1 MALPNQQTVDYPSFKLVIVGDGGTGK 26
>gi|1710007|sp|P54765|RANA_LOTJA GTP-BINDING NUCLEAR PROTEIN RAN1A
>gi|1370203|emb|CAA98187.1| (Z73959) RAN1A [Lotus japonicus]
Length = 209
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 209
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 8..15
Entrez np-binding site: GTP (BY SIMILARITY). 56..60
Entrez np-binding site: GTP (BY SIMILARITY). 113..116
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 118..133
PFAM ras: Ras family 3..198
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 8..15
PROSITE RAN: GTP-binding nuclear protein ran sig 56..71
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 7.6e-75, Sum P(2) = 7.6e-75
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 14 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 73
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 74 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 133
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 134 NLQYYEISA 142
Score = 68 (23.9 bits), Expect = 7.6e-75, Sum P(2) = 7.6e-75
Identities = 13/14 (92%), Positives = 14/14 (100%), Frame = +1
Query: 109 SFKLVIVGDGGTGK 150
+FKLVIVGDGGTGK
Sbjct: 1 NFKLVIVGDGGTGK 14
>gi|1710008|sp|P54766|RANB_LOTJA GTP-BINDING NUCLEAR PROTEIN RAN1B
>gi|1370205|emb|CAA98188.1| (Z73960) RAN1B [Lotus japonicus]
Length = 209
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 209
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 8..15
Entrez np-binding site: GTP (BY SIMILARITY). 56..60
Entrez np-binding site: GTP (BY SIMILARITY). 113..116
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 118..133
PFAM ras: Ras family 3..198
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 8..15
PROSITE RAN: GTP-binding nuclear protein ran sig 56..71
__________________
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 7.6e-75, Sum P(2) = 7.6e-75
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 14 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 73
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 74 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 133
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 134 NLQYYEISA 142
Score = 68 (23.9 bits), Expect = 7.6e-75, Sum P(2) = 7.6e-75
Identities = 13/14 (92%), Positives = 14/14 (100%), Frame = +1
Query: 109 SFKLVIVGDGGTGK 150
+FKLVIVGDGGTGK
Sbjct: 1 NFKLVIVGDGGTGK 14
>gi|495731|gb|AAA32852.1| (L16790) small ras-related protein [Arabidopsis
thaliana]
Length = 203
Frame 3 hits (HSPs): _________________________________
Frame 1 hits (HSPs): __
__________________________________________________
Database sequence: | | | | || 203
0 50 100 150 200
Plus Strand HSPs:
Score = 715 (251.7 bits), Expect = 2.6e-72, Sum P(2) = 2.6e-72
Identities = 129/129 (100%), Positives = 129/129 (100%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH
Sbjct: 8 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 67
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK
Sbjct: 68 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 127
Query: 507 NLQYYEISA 533
NLQYYEISA
Sbjct: 128 NLQYYEISA 136
Score = 44 (15.5 bits), Expect = 2.6e-72, Sum P(2) = 2.6e-72
Identities = 8/8 (100%), Positives = 8/8 (100%), Frame = +1
Query: 127 VGDGGTGK 150
VGDGGTGK
Sbjct: 1 VGDGGTGK 8
>gi|6324759 ref|NP_014828.1| GTP binding protein, almost identical to Gsp1p;
Gsp2p [Saccharomyces cerevisiae] >gi|417091|sp|P32836|GSP2_YEAST
GTP-BINDING NUCLEAR PROTEIN GSP2/CNR2 >gi|486808|pir||S35505
GTP-binding protein GSP2 - yeast (Saccharomyces cerevisiae)
>gi|171623|gb|AAA34654.1| (L08691) GTP-binding protein
[Saccharomyces cerevisiae] >gi|311754|emb|CAA50748.1| (X71946) CNR1
[Saccharomyces cerevisiae] >gi|1420445|emb|CAA99394.1| (Z75093) ORF
YOR185c [Saccharomyces cerevisiae]
Length = 220
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 220
0 50 100 150 200
Plus Strand HSPs:
Score = 599 (210.9 bits), Expect = 7.8e-65, Sum P(2) = 7.8e-65
Identities = 109/129 (84%), Positives = 118/129 (91%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY TIGVEVHPL F+TN G+I+F WDTAGQEKFGGLRDGYYI+
Sbjct: 26 KTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYIN 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDVK R+VKAK +TFHRKK
Sbjct: 86 AQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKK 145
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 146 NLQYYDISA 154
Score = 89 (31.3 bits), Expect = 7.8e-65, Sum P(2) = 7.8e-65
Identities = 16/26 (61%), Positives = 20/26 (76%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
M+ P Q + P+FKLV+VGDGGTGK
Sbjct: 1 MSAPAQNNAEVPTFKLVLVGDGGTGK 26
>gi|7505085|pir||T23195 hypothetical protein K01G5.4 - Caenorhabditis elegans
>gi|3924787|emb|CAB07240.1| (Z92803) predicted using
Genefinder~contains similarity to Pfam domain: PF00071 (Ras
family), Score=208.4, E-value=3.6e-59, N=1~cDNA EST EMBL:T00705
comes from this gene; cDNA EST CEESX11R comes from this gene~cDNA
EST CEESX58F comes from this gene; cD>
Length = 215
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
Plus Strand HSPs:
Score = 603 (212.3 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 111/129 (86%), Positives = 118/129 (91%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTAR+TYKNVP WHRDL RVCENIPIVLCGNKVDVK+R+VKAK +TFHRKK
Sbjct: 82 GQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNKVDVKDRKVKAKTITFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 73 (25.7 bits), Expect = 1.4e-63, Sum P(2) = 1.4e-63
Identities = 13/15 (86%), Positives = 15/15 (100%), Frame = +1
Query: 106 PSFKLVIVGDGGTGK 150
P+FKLV+VGDGGTGK
Sbjct: 8 PTFKLVLVGDGGTGK 22
>gi|6323324 ref|NP_013396.1| GTP-binding protein; Gsp1p [Saccharomyces
cerevisiae] >gi|417090|sp|P32835|GSP1_YEAST GTP-BINDING NUCLEAR
PROTEIN GSP1/CNR1 >gi|486807|pir||S35504 GTP-binding protein GSP1 -
yeast (Saccharomyces cerevisiae) >gi|171621|gb|AAA34653.1| (L08690)
GTP-binding protein [Saccharomyces cerevisiae]
>gi|311752|emb|CAA50747.1| (X71945) CNR2 [Saccharomyces cerevisiae]
>gi|596049|gb|AAB67339.1| (U17243) GTP-binding nuclear protein.
Highly similar to GSP2_YEAST. Belongs to the Ran family of Ras
proteins [Saccharomyces cerevisiae]
Length = 219
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 219
0 50 100 150 200
Plus Strand HSPs:
Score = 599 (210.9 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 109/129 (84%), Positives = 118/129 (91%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY TIGVEVHPL F+TN G+I+F WDTAGQEKFGGLRDGYYI+
Sbjct: 25 KTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYIN 84
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDVK R+VKAK +TFHRKK
Sbjct: 85 AQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKK 144
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 145 NLQYYDISA 153
Score = 74 (26.0 bits), Expect = 3.0e-63, Sum P(2) = 3.0e-63
Identities = 13/17 (76%), Positives = 16/17 (94%), Frame = +1
Query: 100 DYPSFKLVIVGDGGTGK 150
+ P+FKLV+VGDGGTGK
Sbjct: 9 EVPTFKLVLVGDGGTGK 25
>gi|9758105|dbj|BAB08577.1| (AB010071) salt stress inducible small GTP binding
protein Ran1-like protein [Arabidopsis thaliana]
Length = 222
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 222
0 50 100 150 200
Plus Strand HSPs:
Score = 550 (193.6 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 98/129 (75%), Positives = 113/129 (87%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTF+KRHLTGEFE EPT+GV+++PLDFFTN GKIRF CWDTAGQEK+ GL+D YYIH
Sbjct: 26 KTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIH 85
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTAR TY N+ W+RDL RVC+NIPIVLCGNKVDV +RQ+K K V++HRKK
Sbjct: 86 GQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIVLCGNKVDVPSRQIKPKHVSYHRKK 145
Query: 507 NLQYYEISA 533
LQYYE+SA
Sbjct: 146 CLQYYEMSA 154
Score = 117 (41.2 bits), Expect = 1.3e-62, Sum P(2) = 1.3e-62
Identities = 22/26 (84%), Positives = 24/26 (92%), Frame = +1
Query: 73 MALPNQQTVDYPSFKLVIVGDGGTGK 150
MALPNQQ VD P+FKL+IVGDGGTGK
Sbjct: 1 MALPNQQNVDLPTFKLLIVGDGGTGK 26
>gi|585779|sp|P38542|RAN_BRUMA GTP-BINDING NUCLEAR PROTEIN RAN/TC4
>gi|477262|pir||A48463 Ras-like GTP-binding protein - nematode
(Brugia malayi)
Length = 215
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 16..23
Entrez np-binding site: GTP (BY SIMILARITY). 64..68
Entrez np-binding site: GTP (BY SIMILARITY). 121..124
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 126..141
PFAM ras: Ras family 11..188
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 10..31
PRINTS 1: RAN family motif I - 2 23..37
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 33..49
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 51..73
PRINTS 2: RAN family motif II - 2 70..88
PRINTS 3: RAN family motif III - 2 90..111
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 112..125
PRINTS 4: RAN family motif IV - 2 126..144
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 145..167
PRINTS 5: RAN family motif V - 2 164..186
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 10..167
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 169..214
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 588 (207.0 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 108/129 (83%), Positives = 116/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTG+FEKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGDFEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCA MFDVTAR+TYKNVP WHRDL RVCENIPIVLCGNKVDVK+R+VKAK +TFHRKK
Sbjct: 82 GQCAFNMFDVTARVTYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDRKVKAKTITFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 78 (27.5 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 14/17 (82%), Positives = 16/17 (94%), Frame = +1
Query: 100 DYPSFKLVIVGDGGTGK 150
D P+FKLV+VGDGGTGK
Sbjct: 6 DIPTFKLVLVGDGGTGK 22
>gi|7292609|gb|AAF48008.1| (AE003485) ran gene product [Drosophila
melanogaster] >gi|7331134|gb|AAF60289.1|AF233584_1 (AF233584)
Ran10A [Drosophila melanogaster]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 589 (207.3 bits), Expect = 2.1e-62, Sum P(2) = 2.1e-62
Identities = 106/129 (82%), Positives = 116/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRH+TGEFEKKY T+GVEVHPL F TN G IRF WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCA+IMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 GQCAVIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 76 (26.8 bits), Expect = 2.1e-62, Sum P(2) = 2.1e-62
Identities = 14/21 (66%), Positives = 17/21 (80%), Frame = +1
Query: 88 QQTVDYPSFKLVIVGDGGTGK 150
Q+ D P+FK V+VGDGGTGK
Sbjct: 3 QEGQDIPTFKCVLVGDGGTGK 23
>gi|477814|pir||B48463 Ras-like GTP-binding protein - nematode (Onchocerca
volvulus)
Length = 215
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 6..153
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 154..215
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 582 (204.9 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 108/129 (83%), Positives = 116/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTG+ EKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGDPEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTAR+TYKNVP WHRDL RVCENIPIVLCGN VDVK+R+VKAK +TFHRKK
Sbjct: 82 GQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNFVDVKDRKVKAKTITFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 78 (27.5 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 14/17 (82%), Positives = 16/17 (94%), Frame = +1
Query: 100 DYPSFKLVIVGDGGTGK 150
D P+FKLV+VGDGGTGK
Sbjct: 6 DIPTFKLVLVGDGGTGK 22
>gi|585781|sp|P38544|RAN_ONCVO GTP-BINDING NUCLEAR PROTEIN RAN/TC4
Length = 215
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 6..154
Entrez np-binding site: GTP (BY SIMILARITY). 16..23
Entrez np-binding site: GTP (BY SIMILARITY). 64..68
Entrez np-binding site: GTP (BY SIMILARITY). 121..124
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 126..141
PFAM ras: Ras family 11..188
PRINTS 1: RAN family motif I - 2 23..37
PRINTS 2: RAN family motif II - 2 70..88
PRINTS 3: RAN family motif III - 2 90..111
PRINTS 4: RAN family motif IV - 2 126..144
PRINTS 5: RAN family motif V - 2 164..186
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 10..167
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 169..214
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 582 (204.9 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 108/129 (83%), Positives = 116/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTG+ EKKY T+GVEVHPL F TN G+IRF WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGDPEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVTAR+TYKNVP WHRDL RVCENIPIVLCGN VDVK+R+VKAK +TFHRKK
Sbjct: 82 GQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNFVDVKDRKVKAKTITFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 78 (27.5 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 14/17 (82%), Positives = 16/17 (94%), Frame = +1
Query: 100 DYPSFKLVIVGDGGTGK 150
D P+FKLV+VGDGGTGK
Sbjct: 6 DIPTFKLVLVGDGGTGK 22
>gi|8698689|gb|AAF78478.1|AF190700_1 (AF190700) small G-protein Gsp1p [Candida
albicans]
Length = 214
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
Plus Strand HSPs:
Score = 585 (205.9 bits), Expect = 8.9e-62, Sum P(2) = 8.9e-62
Identities = 106/129 (82%), Positives = 117/129 (90%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEV+PL F TN G+++F WDTAGQEKFGGLRDGYYI+
Sbjct: 20 KTTFVKRHLTGEFEKKYIATLGVEVNPLGFHTNFGELKFDVWDTAGQEKFGGLRDGYYIN 79
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQC IIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVDVK R+VKAK +TFHRKK
Sbjct: 80 GQCGIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDVKERKVKAKTITFHRKK 139
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 140 NLQYYDISA 148
Score = 74 (26.0 bits), Expect = 8.9e-62, Sum P(2) = 8.9e-62
Identities = 13/17 (76%), Positives = 16/17 (94%), Frame = +1
Query: 100 DYPSFKLVIVGDGGTGK 150
+ P+FKLV+VGDGGTGK
Sbjct: 4 EVPTFKLVLVGDGGTGK 20
>gi|346437|pir||JC1455 GTP-binding protein Ran/TC4 - dog >gi|6730007|pdb|1BYU|B
Chain B, Canine Gdp-Ran >gi|6730006|pdb|1BYU|A Chain A, Canine
Gdp-Ran
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ___ _____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
__________________
Annotated Domains:
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 17..24
PROSITE RAN: GTP-binding nuclear protein ran sig 65..80
__________________
Plus Strand HSPs:
Score = 591 (208.0 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 107/129 (82%), Positives = 116/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY PT+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVPTLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|5453555 ref|NP_006316.1| ras-related nuclear protein [Homo sapiens]
>gi|6678365 ref|NP_033417.1| RAN, member RAS oncogene family [Mus
sp.] >gi|12737304 ref|XP_012170.1| similar to RAN, member RAS
oncogene family (H. sapiens) [Homo sapiens]
>gi|131844|sp|P28746|RAN_MOUSE GTP-BINDING NUCLEAR PROTEIN RAN
(TC4) >gi|2118457|pir||I57020 GTP-binding protein Ran - mouse
>gi|2144602|pir||TVHUC3 GTP-binding protein Ran/TC4 - human
>gi|3212264|pdb|1A2K|E Chain E, Gdpran-Ntf2 Complex
>gi|3212263|pdb|1A2K|D Chain D, Gdpran-Ntf2 Complex
>gi|3212262|pdb|1A2K|C Chain C, Gdpran-Ntf2 Complex
>gi|5542273|pdb|1IBR|A Chain A, Complex Of Ran With Importin Beta
>gi|5542275|pdb|1IBR|C Chain C, Complex Of Ran With Importin Beta
>gi|924|emb|CAA77980.1| (Z11922) Ran [Canis familiaris]
>gi|190879|gb|AAA36546.1| (M31469) ras-like protein [Homo sapiens]
>gi|263630|gb|AAB24940.1| Ran/TC4 gene product nuclear GTP-binding
protein [human, Peptide, 216 aa] >gi|727167|gb|AAA64247.1| (L32751)
Ran [Mus musculus] >gi|1911761|gb|AAB50841.1| (S83456) GTP-binding
protein [mice, C3H/HeJ spleens, LDS responder, Peptide, 216 aa]
[Mus sp.] >gi|2967848|gb|AAC05840.1| (AF052578) androgen receptor
associated protein 24 [Homo sapiens]
>gi|5566235|gb|AAD45343.1|AF159256_1 (AF159256) Lps/Ran GTPase [Mus
musculus] >gi|11228976|gb|AAG33229.1|AF306457_1 (AF306457) GTPase
[Rattus norvegicus] >gi|12654085|gb|AAH00852.1|AAH00852 (BC000852)
RAN, member RAS oncogene family [Homo sapiens]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 583 (205.2 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 106/129 (82%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|1172839|sp|P42558|RAN_CHICK GTP-BINDING NUCLEAR PROTEIN RAN (TC4)
>gi|283915|pir||S24031 GTP-binding protein, ras-like - chicken
>gi|63765|emb|CAA47355.1| (X66906) ras-like protein [Gallus gallus]
>gi|228911|prf||1814339A ras-like protein [Gallus gallus]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 17..24
Entrez np-binding site: GTP (BY SIMILARITY). 65..69
Entrez np-binding site: GTP (BY SIMILARITY). 122..125
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 127..142
PFAM ras: Ras family 12..189
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 11..32
PRINTS 1: RAN family motif I - 2 24..38
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 34..50
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 52..74
PRINTS 2: RAN family motif II - 2 71..89
PRINTS 3: RAN family motif III - 2 91..112
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 113..126
PRINTS 4: RAN family motif IV - 2 127..145
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 146..168
PRINTS 5: RAN family motif V - 2 165..187
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 11..167
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 170..215
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 17..24
PROSITE RAN: GTP-binding nuclear protein ran sig 65..80
__________________
Plus Strand HSPs:
Score = 583 (205.2 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 106/129 (82%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|4092054|gb|AAC99400.1| (AF054183) GTP binding protein [Homo sapiens]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 583 (205.2 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 106/129 (82%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|5107682|pdb|1RRP|A Chain A, Structure Of The Ran-Gppnhp-Ranbd1 Complex
>gi|5107684|pdb|1RRP|C Chain C, Structure Of The Ran-Gppnhp-Ranbd1
Complex
Length = 204
Frame 3 hits (HSPs): _________________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 204
0 50 100 150 200
Plus Strand HSPs:
Score = 583 (205.2 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 106/129 (82%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 16 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 75
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 76 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 135
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 136 NLQYYDISA 144
Score = 65 (22.9 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 4 FKLVLVGDGGTGK 16
>gi|6729160|dbj|BAA89696.1| (AB030945) ran GTP-binding protein [Xenopus laevis]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 583 (205.2 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 106/129 (82%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 1.3e-60, Sum P(2) = 1.3e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|6857182|gb|AAF30287.1| (AF220950) GTP-binding nuclear protein RAN
[Drosophila melanogaster]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 570 (200.7 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 103/129 (79%), Positives = 113/129 (87%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRH+TGEFEKKY T+GVEVHPL F TN G IRF WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHMTGEFEKKYVATLGVEVHPLIFHTNRGAIRFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCA+IM D +R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 GQCAVIMVDGNSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 76 (26.8 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 14/21 (66%), Positives = 17/21 (80%), Frame = +1
Query: 88 QQTVDYPSFKLVIVGDGGTGK 150
Q+ D P+FK V+VGDGGTGK
Sbjct: 3 QEGQDIPTFKCVLVGDGGTGK 23
>gi|2500061|sp|P79735|RAN_BRARE GTP-BINDING NUCLEAR PROTEIN RAN
>gi|1747495|gb|AAB97093.1| (U61395) Ran [Danio rerio]
Length = 215
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ___
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 16..23
Entrez np-binding site: GTP (BY SIMILARITY). 64..68
Entrez np-binding site: GTP (BY SIMILARITY). 121..124
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 126..141
PFAM ras: Ras family 11..188
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 10..31
PRINTS 1: RAN family motif I - 2 23..37
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 33..49
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 51..73
PRINTS 2: RAN family motif II - 2 70..88
PRINTS 3: RAN family motif III - 2 90..111
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 112..125
PRINTS 4: RAN family motif IV - 2 126..144
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 145..167
PRINTS 5: RAN family motif V - 2 164..186
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 10..166
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 169..214
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 580 (204.2 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 105/129 (81%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I++ WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 82 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 65 (22.9 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 10 FKLVLVGDGGTGK 22
>gi|3850118|emb|CAA10039.1| (AJ012477) Ran protein [Salmo salar]
>gi|3850120|emb|CAA10040.1| (AJ012478) Ran protein [Salmo salar]
Length = 215
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 215
0 50 100 150 200
Plus Strand HSPs:
Score = 580 (204.2 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 105/129 (81%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I++ WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 82 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 65 (22.9 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 10 FKLVLVGDGGTGK 22
>gi|3894108|emb|CAA10191.1| (AJ012827) Ran protein [Salmo salar]
Length = 156
Frame 3 hits (HSPs): __________________________________________
Frame 1 hits (HSPs): _____
__________________________________________________
Database sequence: | | | | | 156
0 50 100 150
Plus Strand HSPs:
Score = 580 (204.2 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 105/129 (81%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I++ WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQ 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 82 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 141
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 142 NLQYYDISA 150
Score = 65 (22.9 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 10 FKLVLVGDGGTGK 22
>gi|5542357|pdb|1QG4|B Chain B, Canine Gdp-Ran F72y Mutant
>gi|5542356|pdb|1QG4|A Chain A, Canine Gdp-Ran F72y Mutant
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 580 (204.2 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 105/129 (81%), Positives = 115/129 (89%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEK+GGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKYGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 2.6e-60, Sum P(2) = 2.6e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|5542355|pdb|1QG2|A Chain A, Canine Gdp-Ran R76e Mutant
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 578 (203.5 bits), Expect = 4.3e-60, Sum P(2) = 4.3e-60
Identities = 105/129 (81%), Positives = 114/129 (88%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGL DGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLEDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 4.3e-60, Sum P(2) = 4.3e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|131845|sp|P17080|RAN_HUMAN GTP-BINDING NUCLEAR PROTEIN RAN (TC4)
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 17..24
Entrez np-binding site: GTP (BY SIMILARITY). 65..69
Entrez np-binding site: GTP (BY SIMILARITY). 122..125
Entrez Domain: IBB DOMAIN. 127..142
PFAM ras: Ras family 12..189
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 11..32
PRINTS 1: RAN family motif I - 2 24..38
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 34..50
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 52..74
PRINTS 2: RAN family motif II - 2 71..89
PRINTS 3: RAN family motif III - 2 91..112
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 113..126
PRINTS 4: RAN family motif IV - 2 127..145
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 146..168
PRINTS 5: RAN family motif V - 2 165..187
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 11..167
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 170..215
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 17..24
PROSITE RAN: GTP-binding nuclear protein ran sig 65..80
__________________
Plus Strand HSPs:
Score = 577 (203.1 bits), Expect = 5.5e-60, Sum P(2) = 5.5e-60
Identities = 105/129 (81%), Positives = 114/129 (88%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+ +VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDSKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 5.5e-60, Sum P(2) = 5.5e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|5107637|pdb|1QBK|C Chain C, Structure Of The Karyopherin Beta2-Ran Gppnhp
Nuclear Transport Complex
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 577 (203.1 bits), Expect = 5.5e-60, Sum P(2) = 5.5e-60
Identities = 105/129 (81%), Positives = 114/129 (88%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAII FDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIXFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 5.5e-60, Sum P(2) = 5.5e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|6729842|pdb|3RAN|B Chain B, Canine Gdp-Ran Q69l Mutant
>gi|4139786|pdb|3RAN|C Chain C, Canine Gdp-Ran Q69l Mutant
>gi|4139787|pdb|3RAN|D Chain D, Canine Gdp-Ran Q69l Mutant
>gi|4139784|pdb|3RAN|A Chain A, Canine Gdp-Ran Q69l Mutant
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 576 (202.8 bits), Expect = 7.0e-60, Sum P(2) = 7.0e-60
Identities = 105/129 (81%), Positives = 114/129 (88%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G I+F WDTAG EKFGGLRDGYYI
Sbjct: 23 KTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGLEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP WHRDL RVCENIPIVLCGNKVD+K+R+VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 65 (22.9 bits), Expect = 7.0e-60, Sum P(2) = 7.0e-60
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 11 FKLVLVGDGGTGK 23
>gi|4583670|emb|CAB40408.1| (AJ010592) GTP-binding nuclear protein RAN
[Guillardia theta]
Length = 213
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 213
0 50 100 150 200
Plus Strand HSPs:
Score = 575 (202.4 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 105/129 (81%), Positives = 117/129 (90%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL FF++ G+I F WDTAGQEKFGGLRDGYYI
Sbjct: 20 KTTFVKRHLTGEFEKKYIATLGVEVHPLKFFSSSGEIIFNIWDTAGQEKFGGLRDGYYIQ 79
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQ AIIMFDVT+RLTYKNVP WHRDL RVC+NIPIVL GNKVD+++R+VKAKQ+TFHRKK
Sbjct: 80 GQAAIIMFDVTSRLTYKNVPNWHRDLTRVCDNIPIVLVGNKVDIRDRKVKAKQITFHRKK 139
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 140 NLQYYDISA 148
Score = 59 (20.8 bits), Expect = 3.8e-59, Sum P(2) = 3.8e-59
Identities = 10/13 (76%), Positives = 12/13 (92%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKL++VGDGG GK
Sbjct: 8 FKLILVGDGGVGK 20
>gi|6677677 ref|NP_033054.1| RAS-like, family 2, locus 9 [Mus musculus]
>gi|2500060|sp|Q61820|RANT_MOUSE GTP-BINDING NUCLEAR PROTEIN RAN,
TESTIS-SPECIFIC ISOFORM >gi|2118458|pir||I76676 gene Ran protein -
mouse >gi|727169|gb|AAA64248.1| (L32752) Ran [Mus musculus]
Length = 216
Frame 3 hits (HSPs): ______________________________
Frame 1 hits (HSPs): ____
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 559 (196.8 bits), Expect = 8.9e-58, Sum P(2) = 8.9e-58
Identities = 102/129 (79%), Positives = 114/129 (88%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTF+KRHLTGEFEK+Y T+GVEVH L F TN G I+F WDTAGQEKFGGLRDGYYI
Sbjct: 23 KTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQ 82
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
QCAIIMFDVT+R+TYKNVP+WH+DL RVCENIPIVLCGNKVDVK+ +VKAK + FHRKK
Sbjct: 83 AQCAIIMFDVTSRVTYKNVPSWHKDLVRVCENIPIVLCGNKVDVKDMKVKAKPILFHRKK 142
Query: 507 NLQYYEISA 533
NLQYY+ISA
Sbjct: 143 NLQYYDISA 151
Score = 62 (21.8 bits), Expect = 8.9e-58, Sum P(2) = 8.9e-58
Identities = 11/13 (84%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FK+V+VGDGGTGK
Sbjct: 11 FKVVLVGDGGTGK 23
>gi|585782|sp|P38545|RAN_PLAFA GTP-BINDING NUCLEAR PROTEIN RAN/TC4
>gi|627065|pir||JC2246 ras related nuclear GTP binding protein
Ran/TC4 homolog - Plasmodium falciparum >gi|1078787|pir||JC2374
ras-related nuclear GTP binding protein Ran/TC4 homolog - malaria
parasite (Plasmodium falciparum) >gi|476130|gb|AAA19587.1| (U06051)
homologue to human Ran/TC4 nuclear GTP-binding protein, PIR
Accession Number A44393 [Plasmodium falciparum]
Length = 214
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 6..154
Entrez np-binding site: GTP (BY SIMILARITY). 16..23
Entrez np-binding site: GTP (BY SIMILARITY). 64..68
Entrez np-binding site: GTP (BY SIMILARITY). 121..124
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 126..141
PFAM ras: Ras family 11..199
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 10..31
PRINTS 1: RAN family motif I - 2 23..37
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 33..49
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 51..73
PRINTS 2: RAN family motif II - 2 70..88
PRINTS 3: RAN family motif III - 2 90..111
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 112..125
PRINTS 4: RAN family motif IV - 2 126..144
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 145..167
PRINTS 5: RAN family motif V - 2 164..186
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 10..166
PRODOM PD050009: RAN_PLAFA 168..213
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 553 (194.7 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 99/129 (76%), Positives = 114/129 (88%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY PT+GVEVHPL F TN GK +F WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGEFEKKYIPTLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIK 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
CAIIMFDV++R+TYKNVP W+RD+ RVCE IP+VL GNKVDVK+RQVK++Q+ FHRK+
Sbjct: 82 SDCAIIMFDVSSRITYKNVPNWYRDITRVCETIPMVLVGNKVDVKDRQVKSRQIQFHRKR 141
Query: 507 NLQYYEISA 533
NLQYY++SA
Sbjct: 142 NLQYYDLSA 150
Score = 63 (22.2 bits), Expect = 3.0e-57, Sum P(2) = 3.0e-57
Identities = 10/15 (66%), Positives = 13/15 (86%), Frame = +1
Query: 106 PSFKLVIVGDGGTGK 150
P +KL++VGDGG GK
Sbjct: 8 PQYKLILVGDGGVGK 22
>gi|606985|gb|AAA79869.1| (U17086) GTP-binding protein rtb2 [Trypanosoma
brucei]
Length = 205
Frame 3 hits (HSPs): ________________________________
Frame 1 hits (HSPs): ___
__________________________________________________
Database sequence: | | | | | | 205
0 50 100 150 200
Plus Strand HSPs:
Score = 545 (191.8 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
Identities = 101/129 (78%), Positives = 110/129 (85%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEK+Y T+GV+VHPL F TN GKI F CWDTAGQEKFGGLRDGYYI
Sbjct: 13 KTTFVKRHLTGEFEKRYVATVGVDVHPLTFHTNRGKICFNCWDTAGQEKFGGLRDGYYIE 72
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
GQCAIIMFDVT+R TYKNVP WHRD+ VC+NIPIVL GNKVD RQVKAK +TFH+K
Sbjct: 73 GQCAIIMFDVTSRNTYKNVPNWHRDITGVCDNIPIVLVGNKVDCAERQVKAKMITFHQK- 131
Query: 507 NLQYYEISA 533
LQYY+ISA
Sbjct: 132 GLQYYDISA 140
Score = 65 (22.9 bits), Expect = 1.3e-56, Sum P(2) = 1.3e-56
Identities = 12/13 (92%), Positives = 13/13 (100%), Frame = +1
Query: 112 FKLVIVGDGGTGK 150
FKLV+VGDGGTGK
Sbjct: 1 FKLVLVGDGGTGK 13
>gi|542430|pir||S40121 ras-related nuclear protein - malaria parasite
(Plasmodium falciparum) >gi|436408|emb|CAA52140.1| (X73954)
ras-related nuclear protein [Plasmodium falciparum]
Length = 214
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: ___________________________________
__________________________________________________
Database sequence: | | | | | | 214
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 6..154
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 545 (191.8 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 98/129 (75%), Positives = 113/129 (87%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFVKRHLTGEFEKKY T+GVEVHPL F TN GK +F WDTAGQEKFGGLRDGYYI
Sbjct: 22 KTTFVKRHLTGEFEKKYIATLGVEVHPLKFQTNFGKTQFNVWDTAGQEKFGGLRDGYYIK 81
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
CAIIMFDV++R+TYKNVP W+RD+ RVCE IP+VL GNKVDVK+RQVK++Q+ FHRK+
Sbjct: 82 SDCAIIMFDVSSRITYKNVPNWYRDITRVCETIPMVLVGNKVDVKDRQVKSRQIQFHRKR 141
Query: 507 NLQYYEISA 533
NLQYY++SA
Sbjct: 142 NLQYYDLSA 150
Score = 63 (22.2 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 10/15 (66%), Positives = 13/15 (86%), Frame = +1
Query: 106 PSFKLVIVGDGGTGK 150
P +KL++VGDGG GK
Sbjct: 8 PQYKLILVGDGGVGK 22
>gi|464546|sp|P33519|RAN_DICDI GTP-BINDING NUCLEAR PROTEIN RAN/TC4
>gi|422288|pir||S35619 GTP-binding protein - slime mold
(Dictyostelium discoideum) >gi|167894|gb|AAA33255.1| (L09720)
GTP-binding protein [Dictyostelium discoideum]
>gi|299824|gb|AAB26358.1| TC4 related GTP binding protein
[Dictyostelium discoideum, Peptide, 212 aa]
Length = 212
Frame 3 hits (HSPs): _______________________________
Frame 1 hits (HSPs): ____
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | | 212
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 3..150
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 151..211
Entrez np-binding site: GTP (BY SIMILARITY). 13..20
Entrez np-binding site: GTP (BY SIMILARITY). 61..65
Entrez np-binding site: GTP (BY SIMILARITY). 118..121
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 123..138
PFAM ras: Ras family 8..180
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 7..28
PRINTS 1: RAN family motif I - 2 20..34
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 30..46
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 48..70
PRINTS 2: RAN family motif II - 2 67..85
PRINTS 3: RAN family motif III - 2 87..108
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 109..122
PRINTS 4: RAN family motif IV - 2 123..141
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 142..164
PRINTS 5: RAN family motif V - 2 161..183
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 8..164
PRODOM PD194058: RAN_DICDI 166..211
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 13..20
PROSITE RAN: GTP-binding nuclear protein ran sig 61..76
__________________
Plus Strand HSPs:
Score = 553 (194.7 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 98/129 (75%), Positives = 111/129 (86%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFV+RHLTGEFE +Y PT+GV VHPL F+TN GKI F WDTAGQEKFGGLRDGYYI
Sbjct: 19 KTTFVQRHLTGEFEPRYIPTLGVSVHPLIFYTNFGKIHFNVWDTAGQEKFGGLRDGYYIQ 78
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
G CAIIMFDVT+R++YKNVP WH DL RVCENIPIVLCGNKVDVK+R+VK Q+ FHR+
Sbjct: 79 GNCAIIMFDVTSRISYKNVPNWHSDLTRVCENIPIVLCGNKVDVKDRKVKPSQIVFHRRY 138
Query: 507 NLQYYEISA 533
NL YY++SA
Sbjct: 139 NLSYYDVSA 147
Score = 54 (19.0 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 10/12 (83%), Positives = 11/12 (91%), Frame = +1
Query: 115 KLVIVGDGGTGK 150
KLV+VGDGG GK
Sbjct: 8 KLVLVGDGGVGK 19
>gi|134822|sp|P28748|SPI1_SCHPO GTP-BINDING NUCLEAR PROTEIN SPI1
>gi|101078|pir||A40039 gtp-binding nuclear protein spi1 - fission
yeast (Schizosaccharomyces pombe) >gi|299321|gb|AAB25844.1|
GTPase=spi1 gene product [Schizosaccharomyces pombe, Peptide, 216
aa] >gi|4490658|emb|CAB38683.1| (AL035675) gtp-binding nuclear
protein spi1. [Schizosaccharomyces pombe]
Length = 216
Frame 3 hits (HSPs): ___________________________________
Annotated Domains: ________________________________________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
__________________
Annotated Domains:
BLOCKS BL01115A: GTP-binding nuclear protein ra 10..53
BLOCKS BL01115B: GTP-binding nuclear protein ra 90..133
BLOCKS BL01115C: GTP-binding nuclear protein ra 139..169
BLOCKS BL01115D: GTP-binding nuclear protein ra 183..214
Entrez np-binding site: GTP (BY SIMILARITY). 16..23
Entrez np-binding site: GTP (BY SIMILARITY). 64..68
Entrez np-binding site: GTP (BY SIMILARITY). 121..124
PFAM ras: Ras family 11..206
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 10..31
PRINTS 1: RAN family motif I - 2 23..37
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 33..49
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 51..73
PRINTS 2: RAN family motif II - 2 70..88
PRINTS 3: RAN family motif III - 2 90..111
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 112..125
PRINTS 4: RAN family motif IV - 2 126..144
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 145..167
PRINTS 5: RAN family motif V - 2 164..186
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 10..166
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 169..215
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 16..23
PROSITE RAN: GTP-binding nuclear protein ran sig 64..79
__________________
Plus Strand HSPs:
Score = 572 (201.4 bits), Expect = 1.8e-54, P = 1.8e-54
Identities = 112/151 (74%), Positives = 121/151 (80%), Frame = +3
Query: 81 AQPANRGLP*FQTRYRRRWWHRKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIR 260
AQP N +P F+ KTTFVKRHLTGEFEKKY T+GVEVHPL F TN G+I
Sbjct: 2 AQPQN--VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEIC 59
Query: 261 FYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLC 440
F WDTAGQEK GGLRDGYYI GQC IIMFDVT+R+TYKNVP W RDL RVCENIPIVLC
Sbjct: 60 FNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLC 119
Query: 441 GNKVDVKNRQVKAKQVTFHRKKNLQYYEISA 533
GNKVDVK R+VKAK +TFHRKKNLQYY+ISA
Sbjct: 120 GNKVDVKERKVKAKAITFHRKKNLQYYDISA 150
>gi|4336905|gb|AAD18006.1| (AF112244) Ran-related GTP binding protein [Zea
mays]
Length = 170
Frame 3 hits (HSPs): _______________________________
__________________________________________________
Database sequence: | | | | | 170
0 50 100 150
Plus Strand HSPs:
Score = 558 (196.4 bits), Expect = 5.5e-53, P = 5.5e-53
Identities = 100/102 (98%), Positives = 101/102 (99%), Frame = +3
Query: 228 LDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLC 407
LDF TNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLC
Sbjct: 2 LDFSTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLC 61
Query: 408 RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISA 533
RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISA
Sbjct: 62 RVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISA 103
>gi|1172841|sp|P41915|RAN_TETTH GTP-BINDING NUCLEAR PROTEIN RAN/TC4
>gi|559386|dbj|BAA04600.1| (D17748) Ran/TC4 [Tetrahymena
thermophila]
Length = 225
Frame 3 hits (HSPs): _____________________________
Frame 1 hits (HSPs): ______
Annotated Domains: _______________________________________________
__________________________________________________
Database sequence: | | | | | | 225
0 50 100 150 200
__________________
Annotated Domains:
Entrez np-binding site: GTP (BY SIMILARITY). 18..25
Entrez np-binding site: GTP (BY SIMILARITY). 66..70
Entrez np-binding site: GTP (BY SIMILARITY). 123..126
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 128..143
PFAM ras: Ras family 13..202
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 12..33
PRINTS 1: RAN family motif I - 2 25..39
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 35..51
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 53..75
PRINTS 2: RAN family motif II - 2 72..90
PRINTS 3: RAN family motif III - 2 92..113
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 114..127
PRINTS 4: RAN family motif IV - 2 128..146
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 147..169
PRINTS 5: RAN family motif V - 2 166..188
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 12..168
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 171..221
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 18..25
PROSITE RAN: GTP-binding nuclear protein ran sig 66..81
__________________
Plus Strand HSPs:
Score = 481 (169.3 bits), Expect = 6.9e-50, Sum P(2) = 6.9e-50
Identities = 87/129 (67%), Positives = 105/129 (81%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFV RH TGEFEK+Y T GV V + +T G IRF WDTAGQEK GGLR+GYYI
Sbjct: 24 KTTFVTRHQTGEFEKRYIATQGVNVSNMVLYTTKGPIRFNIWDTAGQEKLGGLREGYYIG 83
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
AI+MFDVT+R+TYKN+P WH+DL R+CENIPIVL GNKVD K+R+VKA+Q+TFHRK+
Sbjct: 84 ANAAIMMFDVTSRITYKNIPKWHKDLTRICENIPIVLVGNKVDSKDRKVKARQITFHRKR 143
Query: 507 NLQYYEISA 533
+LQYY++SA
Sbjct: 144 SLQYYDVSA 152
Score = 65 (22.9 bits), Expect = 6.9e-50, Sum P(2) = 6.9e-50
Identities = 14/22 (63%), Positives = 16/22 (72%), Frame = +1
Query: 85 NQQTVDYPSFKLVIVGDGGTGK 150
N+Q V FKLV+VGDGG GK
Sbjct: 4 NKQNV-VAEFKLVLVGDGGVGK 24
>gi|1172840|sp|P41914|RAN_TETPY GTP-BINDING NUCLEAR PROTEIN RAN/TC4
>gi|559385|dbj|BAA04849.1| (D21825) Ran/TC4 [Tetrahymena
pyriformis]
Length = 223
Frame 3 hits (HSPs): _____________________________
Frame 1 hits (HSPs): ______
Annotated Domains: _________________________________________________
__________________________________________________
Database sequence: | | | | | | 223
0 50 100 150 200
__________________
Annotated Domains:
DOMO DM00006: RASTRANSFORMINGPROTEIN 8..155
DOMO DM01222: GTP-BINDINGNUCLEARPROTEINRAN 156..222
Entrez np-binding site: GTP (BY SIMILARITY). 18..25
Entrez np-binding site: GTP (BY SIMILARITY). 66..70
Entrez np-binding site: GTP (BY SIMILARITY). 123..126
Entrez Domain: IBB DOMAIN (BY SIMILARITY). 128..143
PFAM ras: Ras family 13..183
PRINTS RASTRNSFRMNG1: P21 RAS motif I - 3 12..33
PRINTS 1: RAN family motif I - 2 25..39
PRINTS RASTRNSFRMNG2: P21 RAS motif II - 3 35..51
PRINTS RASTRNSFRMNG3: P21 RAS motif III - 3 53..75
PRINTS 2: RAN family motif II - 2 72..90
PRINTS 3: RAN family motif III - 2 92..113
PRINTS RASTRNSFRMNG4: P21 RAS motif IV - 3 114..127
PRINTS 4: RAN family motif IV - 2 128..146
PRINTS RASTRNSFRMNG5: P21 RAS motif V - 3 147..169
PRINTS 5: RAN family motif V - 2 166..188
PRODOM PD000015: GBA1(22) IF2(15) ARF1(14) 12..168
PRODOM PD002821: RAN(9) RAN1(2) RAN2(2) 171..219
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 18..25
PROSITE RAN: GTP-binding nuclear protein ran sig 66..81
__________________
Plus Strand HSPs:
Score = 470 (165.4 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 85/129 (65%), Positives = 103/129 (79%), Frame = +3
Query: 147 KTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIH 326
KTTFV RH TGEFEK+Y T GV V + T G IRF WDTAGQEK GGLR+GYYI
Sbjct: 24 KTTFVTRHQTGEFEKRYIATQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIG 83
Query: 327 GQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKK 506
AI+MFDVT+R+TYKN+P WH+DL R+CEN+PIVL GNKVD K+ +VKA+Q+TFHRK+
Sbjct: 84 ADAAIMMFDVTSRITYKNIPKWHKDLTRICENVPIVLVGNKVDSKDSKVKARQITFHRKR 143
Query: 507 NLQYYEISA 533
+LQYY++SA
Sbjct: 144 SLQYYDVSA 152
Score = 64 (22.5 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 14/22 (63%), Positives = 16/22 (72%), Frame = +1
Query: 85 NQQTVDYPSFKLVIVGDGGTGK 150
N+Q V FKLV+VGDGG GK
Sbjct: 4 NKQDV-VAEFKLVLVGDGGVGK 24
WARNING: HSPs involving 1223 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.98
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.333 0.145 0.491
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.348 0.152 0.593
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.330 0.140 0.433
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.340 0.150 0.518
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.347 0.149 0.538
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.360 0.158 0.604
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 182 182 10. 76 3 12 22 0.12 34
31 0.12 37
+2 0 182 181 10. 76 3 12 22 0.12 34
31 0.12 37
+1 0 182 181 10. 76 3 12 22 0.12 34
31 0.12 37
-1 0 182 182 10. 76 3 12 22 0.12 34
31 0.12 37
-2 0 182 182 10. 76 3 12 22 0.12 34
31 0.12 37
-3 0 182 181 10. 76 3 12 22 0.12 34
31 0.12 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 1273
No. of states in DFA: 592 (58 KB)
Total size of DFA: 234 KB (256 KB)
Time to generate neighborhood: 0.01u 0.01s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 197.45u 1.09s 198.54t Elapsed: 00:00:34
Total cpu time: 197.51u 1.13s 198.64t Elapsed: 00:00:34
Start: Sat Feb 2 03:17:36 2002 End: Sat Feb 2 03:18:10 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000