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UniSTS:76044 Links
WI-15024
Equus caballus chromosome 5, locus LOC100055075
Homo sapiens chromosome 1, locus FAM63A
Pan troglodytes locus LOC469483

Found by e-PCR in sequences from Homo sapiens, Ovis aries, Pan troglodytes and Sus scrofa.

Primer InformationHelp

Forward primer:TGTTTGCAGGTGATGATCCT
Reverse primer:TGAGTATACACCCGAGTGCA
PCR product size:150 (bp), Homo sapiens
GenBank Accession:G21163 H20827

   Equus caballus
Name: WI-15024
Polymorphism info:  

Cross References Help
Gene GeneID:100055075
 Symbol:LOC100055075
 Description:hypothetical protein LOC100055075
 Position: 
UniGeneEca.14066 Hypothetical protein LOC100055075

Mapping InformationHelp
WI-15024 Sequence Map: Chr 5 Map Viewer
  Position: 46186158-46186676 (bp)

   Homo sapiens
Name: WI-15024
Also known as: EST280765
Polymorphism info:  

Cross References Help
Gene GeneID:55793
 Symbol:FAM63A
 Description:family with sequence similarity 63, member A
 Position:1q21.2
UniGeneHs.3346 Family with sequence similarity 63, member A

Mapping InformationHelp
View all results using the Map Viewer
 
WI-15024 NCBI RH Map: Chr 1 Map Viewer
  Position: 1017.3 (cR)
  Lod score: 1.85
 
WI-15024 Whitehead-RH Map: Chr 1 Map Viewer
  Position: 643.4 (cR3000)
  Lod score: P0.17
 
WI-15024 GeneMap99-GB4 Map: Chr 1 Map Viewer
  Position: 545.98 (cR3000)
  Lod score: 0.77
  Reference Interval: D1S514-D1S2635

Electronic PCR results Help
RefSeq mRNA (2)
NM_001040217.1 912 .. 1061 (150 bp)  
NM_018379.3 1497 .. 1646 (150 bp)  
 
mRNA (5)
AK002142.1 690 .. 839 (150 bp)  
AB037811.1 813 .. 962 (150 bp)  
BC032321.1 1104 .. 1253 (150 bp)  
AK125493.1 664 .. 813 (150 bp)  
AK125959.1 2344 .. 2493 (150 bp)  
 
Genomic (5 of 9)[Show All Hits]
G21163.1 1 .. 150 (150 bp)  
AL590133.32 86084 .. 86725 (642 bp)  
CH003448.1 123907950 .. 123908591 (642 bp)  
CH003496.1 125827966 .. 125828607 (642 bp)  
DQ036726.1 768 .. 917 (150 bp)  
 
ESTs (5 of 7)[Show All Hits]
H20827.1 1 .. 150 (150 bp)  
BI761931.1 479 .. 628 (150 bp)  
BM722375.1 213 .. 362 (150 bp)  
AL520489.3 711 .. 860 (150 bp)  
BP304302.1 353 .. 502 (150 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01008482.1 7871 .. 8512 (642 bp)  
AADC01007065.1 8914 .. 9555 (642 bp)  
AADB02000919.1 19565 .. 20206 (642 bp)  
ABBA01049365.1 8615 .. 9256 (642 bp)  
 

   Ovis aries
 
Polymorphism info:  

Cross References Help
UniGeneOar.3723 Transcribed locus, strongly similar to NP_001035307.1 hypothetical protein L...


Electronic PCR results Help
ESTs (1)
EE824350.1 235 .. 385 (151 bp)  
 

   Pan troglodytes
 
Polymorphism info:  

Cross References Help
Gene GeneID:469483
 Symbol:LOC469483
 Description:similar to KIAA1390 protein
 Position: 


Electronic PCR results Help
RefSeq mRNA (1)
XM_524866.2 1176 .. 1325 (150 bp)  
 
Genomic (1)
CM000314.1 130041174 .. 130041816 (643 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01105456.1 3663 .. 4305 (643 bp)  
AACZ02009140.1 8652 .. 9294 (643 bp)  
 

   Sus scrofa
 
Polymorphism info:  

Cross References Help
UniGeneSsc.1279 MRNA, clone:OVRM10171D03, expressed in ovary


Electronic PCR results Help
ESTs (3)
CK458760.1 419 .. 569 (151 bp)  
CK459238.1 338 .. 488 (151 bp)  
DN110045.1 681 .. 831 (151 bp)  
 

 

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