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Finding cDNAs
UGID:6547     UniGene At.15024     Arabidopsis thaliana (thale cress)   BPC2 Links
BPC2 (BASIC PENTACYSTEINE 2) (BPC2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_563955.1 BPC2 (BASIC PENTACYSTEINE 2) A. thaliana 100.0 278

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
cDNA Sources: mixed; silique; inflorescence; whole plant; unspecified tissue; root; other; flower; bud
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AY058073.1 Arabidopsis thaliana At1g14680/F10B6_22 mRNA, complete cds P
NM_101336.3 Arabidopsis thaliana BPC2 (BASIC PENTACYSTEINE 2) (BPC2) mRNA, complete cds P
AY090305.1 Arabidopsis thaliana At1g14680/F10B6_22 mRNA, complete cds P
NM_179331.2 Arabidopsis thaliana BPC2 (BASIC PENTACYSTEINE 2) (BPC2) mRNA, complete cds P
AY380568.1 Arabidopsis thaliana basic pentacysteine 2 (BPC2) mRNA, complete cds P
BX814268.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX818308.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL71ZH11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) P
NM_202099.1 Arabidopsis thaliana BPC2 (BASIC PENTACYSTEINE 2) (BPC2) mRNA, complete cds P
DQ307037.1 Arabidopsis thaliana GAGA-binding transcriptional activator (BBR/BPC2) mRNA, complete cds P

EST sequences (10 of 39) [Show all sequences]

BE521548.1 Clone M20C4 other 5' read P
BE521549.1 Clone M20C4 other 3' read
AV531037.1 Clone FB013h02F bud 3' read P
AV545047.1 Clone RZ69d11F root 3' read P
AV558181.1 Clone SQ091f01F silique 3' read P
AV559776.1 Clone SQ123e01F silique 3' read P
AV562210.1 Clone SQ166a09F silique 3' read P
BE039294.1 mixed 5' read P
AI995472.1 Clone 701675222 inflorescence P
AV802501.1 Clone RAFL09-32-C17 whole plant 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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