Shigella dysenteriae Sd197

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140482-140581 (1-100) 140582-140681 (101-200) 140682-140781 (201-300) 140782-140881 (301-400) 140882-140981 (401-500)
140982-141081 (501-600) 141082-141181 (601-700) 141182-141281 (701-800) 141282-141381 (801-900) 141382-141481 (901-1000)
141482-141581 (1001-1100) 141582-141681 (1101-1200) 141682-141781 (1201-1300) 141782-141881 (1301-1400) 141882-141981 (1401-1500)
141982-142081 (1501-1600) 142082-142181 (1601-1700) 142182-142281 (1701-1800) 142282-142381 (1801-1900) 142382-142481 (1901-2000)
142482-142581 (2001-2100) 142582-142681 (2101-2200) 142682-142781 (2201-2300) 142782-142881 (2301-2400) 142882-142981 (2401-2500)
142982-143081 (2501-2600) 143082-143181 (2601-2700) 143182-143281 (2701-2800) 143282-143381 (2801-2900) 143382-143481 (2901-3000)
143482-143581 (3001-3100) [143582-143681 (3101-3200)] 143682-143781 (3201-3300) 143782-143881 (3301-3400) 143882-143981 (3401-3500)
143982-144081 (3501-3600) 144082-144181 (3601-3700) 144182-144281 (3701-3800) 144282-144381 (3801-3900) 144382-144481 (3901-4000)
144482-144581 (4001-4100) 144582-144681 (4101-4200) 144682-144758 (4201-4277)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143582 pnp hypothetical SDY_3343 polynucleotide phosphorylase
cytidylate kinase activity; Code: J; COG: COG1185
genbank 81242626 ABB63336.1 734 3099744 3101948
143583 rpsO hypothetical SDY_3344 30S ribosomal subunit protein S15
Code: J; COG: COG0184
genbank 81242627 ABB63337.1 89 3102126 3102395
143584 truB hypothetical SDY_3345 tRNA pseudouridine 5S synthase
Code: J; COG: COG0130
genbank 81242628 ABB63338.1 314 3102544 3103488
143585 rbfA hypothetical SDY_3346 ribosome-binding factor A
Code: J; COG: COG0858
genbank 81242629 ABB63339.1 133 3103488 3103889
143586 infB hypothetical SDY_3347 protein chain initiation factor IF-2
Code: J; COG: COG0532
genbank 81242630 ABB63340.1 890 3104053 3106725
143587 nusA hypothetical SDY_3348 transcription pausing
L factor; Code: K; COG: COG0195
genbank 81242631 ABB63341.1 495 3106750 3108237
143588 yhbC hypothetical SDY_3349 conserved hypothetical protein
Code: S; COG: COG0779; orf
genbank 81242632 ABB63342.1 152 3108265 3108723
143589 argG hypothetical SDY_3351 argininosuccinate synthetase
Code: E; COG: COG0137
genbank 81242633 ABB63343.1 447 3109348 3110691
143590 yhbX hypothetical SDY_3352 putative alkaline phosphatase I
Code: R; COG: COG2194
genbank 81242634 ABB63344.1 505 3110699 3112216
143591 hypothetical SDY_3353 iso-IS1 ORF2 genbank 81242635 ABB63345.1 62 3112377 3112565
143592 hypothetical SDY_3354 iso-IS1 ORF2 genbank 81242636 ABB63346.1 77 3112540 3112773
143593 secG hypothetical SDY_3356 protein export - membrane protein
Code: U; COG: COG1314
genbank 81242637 ABB63347.1 110 3113578 3113910
143594 mrsA hypothetical SDY_3357 phosphoglucomutase- and phosphomannomutase-like protein
Code: G; COG: COG1109
genbank 81242638 ABB63348.1 445 3114138 3115475
143595 folP hypothetical SDY_3358 7,8-dihydropteroate synthase
Code: H; COG: COG0294
genbank 81242639 ABB63349.1 297 3115468 3116361
143596 hflB hypothetical SDY_3359 HflB
degrades sigma32, integral membrane peptidase, cell division protein; Code: O; COG: COG0465
genbank 81242640 ABB63350.1 644 3116406 3118340
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143597 ftsJ hypothetical SDY_3360 cell division protein
Code: J; COG: COG0293
genbank 81242641 ABB63351.1 209 3118440 3119069
143598 yhbY hypothetical SDY_3361 conserved hypothetical protein
Code: J; COG: COG1534; orf
genbank 81242642 ABB63352.1 97 3119195 3119488
143599 greA hypothetical SDY_3362 transcription elongation factor
cleaves 3' nucleotide of paused mRNA; Code: K; COG: COG0782
genbank 81242643 ABB63353.1 153 3119645 3120106
143600 dacB hypothetical SDY_3363 D-alanyl-D-alanine carboxypeptidase, fraction B
penicillin-binding protein 4; Code: M; COG: COG2027
genbank 81242644 ABB63354.1 477 3120368 3121801
143601 yhbZ hypothetical SDY_3364 putative GTP-binding factor
Code: R; COG: COG0536
genbank 81242645 ABB63355.1 390 3121841 3123013
143602 yhbE hypothetical SDY_3365 conserved hypothetical protein
Code: GER; COG: COG0697; orf
genbank 81242646 ABB63356.1 321 3123029 3123994
143603 rpmA hypothetical SDY_3366 50S ribosomal subunit protein L27
Code: J; COG: COG0211
genbank 81242647 ABB63357.1 85 3124121 3124378
143604 rplU hypothetical SDY_3367 50S ribosomal subunit protein L21
Code: J; COG: COG0261
genbank 81242648 ABB63358.1 103 3124399 3124710
143605 ispB hypothetical SDY_3368 octaprenyl diphosphate synthase
Code: H; COG: COG0142
genbank 81242649 ABB63359.1 323 3124968 3125939
143606 nlp hypothetical SDY_3369 regulatory factor of maltose metabolism
similar to Ner repressor protein of phage Mu; Code: K; COG: COG3423
genbank 81242650 ABB63360.1 92 3126167 3126445
143607 murA hypothetical SDY_3370 UDP-N-glucosamine 1-carboxyvinyltransferase
first step in murein biosynthesis; Code: M; COG: COG0766
genbank 81242651 ABB63361.1 419 3126493 3127752
143608 yrbA hypothetical SDY_3371 conserved hypothetical protein
Code: K; COG: COG5007; orf
genbank 81242652 ABB63362.1 89 3127807 3128076
143609 yrbB hypothetical SDY_3372 conserved hypothetical protein
Code: R; COG: COG3113; orf
genbank 81242653 ABB63363.1 129 3128221 3128610
143610 yrbC hypothetical SDY_3373 conserved hypothetical protein
Code: Q; COG: COG2854; orf
genbank 81242654 ABB63364.1 211 3128514 3129149
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143611 yrbD hypothetical SDY_3374 conserved hypothetical protein
Code: Q; COG: COG1463; orf
genbank 81242655 ABB63365.1 183 3129168 3129719
143612 yrbE hypothetical SDY_3375 conserved hypothetical protein
Code: Q; COG: COG0767; orf
genbank 81242656 ABB63366.1 260 3129724 3130506
143613 yrbF hypothetical SDY_3376 putative ATP-binding component of a transport system
Code: Q; COG: COG1127
genbank 81242657 ABB63367.1 269 3130514 3131323
143614 yrbG hypothetical SDY_3377 conserved hypothetical protein
Code: P; COG: COG0530; orf
genbank 81242658 ABB63368.1 321 3131536 3132501
143615 yrbH hypothetical SDY_3378 putative isomerase
Code: M; COG: COG0794
genbank 81242659 ABB63369.1 328 3132515 3133501
143616 yrbI hypothetical SDY_3379 conserved hypothetical protein
Code: R; COG: COG1778; orf
genbank 81242660 ABB63370.1 188 3133522 3134088
143617 yrbK hypothetical SDY_3380 conserved hypothetical protein
Code: S; COG: COG3117; orf
genbank 81242661 ABB63371.1 191 3134085 3134660
143618 yhbN hypothetical SDY_3381 conserved hypothetical protein
Code: S; COG: COG1934; orf
genbank 81242662 ABB63372.1 185 3134629 3135186
143619 yhbG hypothetical SDY_3382 putative ATP-binding component of a transport system
Code: R; COG: COG1137
genbank 81242663 ABB63373.1 241 3135193 3135918
143620 rpoN hypothetical SDY_3383 RNA polymerase, sigma(54 or 60) factor
nitrogen and fermentation regulation; Code: K; COG: COG1508
genbank 81242664 ABB63374.1 477 3135966 3137399
143621 yhbH hypothetical SDY_3384 probable sigma-54 modulation protein
Code: J; COG: COG1544
genbank 81242665 ABB63375.1 95 3137422 3137709
143622 ptsN hypothetical SDY_3385 phosphotransferase system enzyme IIA
regulates N metabolism; Code: GT; COG: COG1762
genbank 81242666 ABB63376.1 163 3137827 3138318
143623 yhbJ hypothetical SDY_3386 conserved hypothetical protein
Code: R; COG: COG1660; orf
genbank 81242667 ABB63377.1 284 3138364 3139218
143624 ptsO hypothetical SDY_3387 phosphocarrier protein HPr-like NPr
nitrogen related, exchanges phosphate with Enzyme I, Hpr; Code: G; COG: COG1925
genbank 81242668 ABB63378.1 90 3139215 3139487
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143625 yrbL hypothetical SDY_3388 conserved hypothetical protein
orf
genbank 81242669 ABB63379.1 210 3139701 3140333
143626 mtgA hypothetical SDY_3389 putative peptidoglycan enzyme
Code: M; COG: COG0744
genbank 81242670 ABB63380.1 242 3140330 3141058
143627 yhbL hypothetical SDY_3390 sigma cross-reacting protein 27A
SCRP-27A; Code: Q; COG: COG3155
genbank 81242671 ABB63381.1 220 3141055 3141717
143628 arcB hypothetical SDY_3391 aerobic respiration sensor-response protein
histidine protein kinase/phosphatase, sensor for arcA; Code: T; COG: COG0642
genbank 81242672 ABB63382.1 778 3141938 3144274
143629 yhcC hypothetical SDY_3392 conserved hypothetical protein
Code: R; COG: COG1242; orf
genbank 81242673 ABB63383.1 309 3144370 3145299
143630 gltB hypothetical SDY_3393 glutamate synthase, large subunit
Code: E; COG: COG0069
genbank 81242674 ABB63384.1 1486 3145973 3150433
143631 gltD hypothetical SDY_3394 glutamate synthase, small subunit
Code: ER; COG: COG0493
genbank 81242675 ABB63385.1 472 3150446 3151864
143632 yhcG hypothetical SDY_3395 conserved hypothetical protein
Code: S; COG: COG4804; orf
genbank 81242676 ABB63386.1 375 3152048 3153175
143633 yhcH hypothetical SDY_3396 conserved hypothetical protein
Code: G; COG: COG2731; orf
genbank 81242677 ABB63387.1 154 3153235 3153699
143634 yhcI hypothetical SDY_3397 putative NAGC-like transcriptional regulator
Code: KG; COG: COG1940
genbank 81242678 ABB63388.1 302 3153696 3154604
143635 yhcJ hypothetical SDY_3398 putative enzyme
Code: G; COG: COG3010
genbank 81242679 ABB63389.1 229 3154568 3155257
143636 nanT hypothetical SDY_3399 sialic acid transporter
Code: GEPR; COG: COG0477
genbank 81242680 ABB63390.1 506 3155305 3156825
143637 nanA hypothetical SDY_3400 N-acetylneuraminate lyase
aldolase; catabolism of sialic acid; not K12?; Code: EM; COG: COG0329
genbank 81242681 ABB63391.1 297 3156904 3157797
143638 yhcK hypothetical SDY_3401 putative FADA-type transcriptional regulator
Code: K; COG: COG2186
genbank 81242682 ABB63392.1 263 3157991 3158782
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143639 hypothetical SDY_3402 iso-IS1 ORF2
Code: L; COG: COG1662
genbank 81242683 ABB63393.1 118 3159109 3159465
143640 sspB hypothetical SDY_3404 stringent starvation protein B
Code: R; COG: COG2969
genbank 81242684 ABB63394.1 165 3160299 3160796
143641 sspA hypothetical SDY_3405 stringent starvation protein A
regulator of transcription; Code: O; COG: COG0625
genbank 81242685 ABB63395.1 212 3160802 3161440
143642 rpsI hypothetical SDY_3406 30S ribosomal subunit protein S9
Code: J; COG: COG0103
genbank 81242686 ABB63396.1 130 3161834 3162226
143643 rplM hypothetical SDY_3407 50S ribosomal subunit protein L13
Code: J; COG: COG0102
genbank 81242687 ABB63397.1 142 3162242 3162670
143644 yhcM hypothetical SDY_3408 conserved hypothetical protein
Code: R; COG: COG1485; orf
genbank 81242688 ABB63398.1 375 3162889 3164016
143645 yhcB hypothetical SDY_3409 conserved hypothetical protein
Code: S; COG: COG3105; orf
genbank 81242689 ABB63399.1 134 3164204 3164608
143646 degQ hypothetical SDY_3410 serine endoprotease
Code: O; COG: COG0265
genbank 81242690 ABB63400.1 455 3164762 3166129
143647 degS hypothetical SDY_3411 protease
Code: O; COG: COG0265
genbank 81242691 ABB63401.1 355 3166219 3167286
143648 mdh hypothetical SDY_3412 malate dehydrogenase
Code: C; COG: COG0039
genbank 81242692 ABB63402.1 312 3167349 3168287
143649 argR hypothetical SDY_3413 repressor of arg regulon
cer-mediated site-specific recombination; Code: K; COG: COG1438
genbank 81242693 ABB63403.1 156 3168722 3169192
143650 yhcN hypothetical SDY_3414 conserved hypothetical protein
orf
genbank 81242694 ABB63404.1 87 3169557 3169820
143651 yhcO hypothetical SDY_3415 conserved hypothetical protein
Code: K; COG: COG2732; orf
genbank 81242695 ABB63405.1 90 3169876 3170148
143652 yhcP hypothetical SDY_3416 conserved hypothetical protein
Code: S; COG: COG1289; orf
genbank 81242696 ABB63406.1 655 3170240 3172207
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143653 yhcQ hypothetical SDY_3417 putative membrane protein
Code: V; COG: COG1566
genbank 81242697 ABB63407.1 310 3172213 3173145
143654 yhcR hypothetical SDY_3418 conserved hypothetical protein
orf
genbank 81242698 ABB63408.1 90 3173153 3173425
143655 qseA hypothetical SDY_3419 quorum sensing regulator A
similar to quorum sensing Escherichia coli regulator A; Code: K; COG: COG0583
genbank 81242699 ABB63409.1 309 3173539 3174468
143656 tldD hypothetical SDY_3420 CsrA inhibitory activity suppressor
Code: R; COG: COG0312
genbank 81242700 ABB63410.1 481 3174596 3176041
143657 yhdRP hypothetical SDY_3421 Uncharacterized membrane protein
Code: S; COG: COG3164
genbank 81242701 ABB63411.1 1266 3176197 3179997
143658 cafA hypothetical SDY_3422 bundles of cytoplasmic filaments
Code: J; COG: COG1530
genbank 81242702 ABB63412.1 495 3180065 3181552
143659 yhdE hypothetical SDY_3423 conserved hypothetical protein
Code: D; COG: COG0424; orf
genbank 81242703 ABB63413.1 197 3181524 3182117
143660 mreD hypothetical SDY_3424 rod shape-determining protein
Code: M; COG: COG2891
genbank 81242704 ABB63414.1 162 3182126 3182614
143661 mreC hypothetical SDY_3425 rod shape-determining protein
Code: M; COG: COG1792
genbank 81242705 ABB63415.1 367 3182614 3183717
143662 mreB hypothetical SDY_3426 penicillin binding protein 3
regulator of ftsI; septation function; Code: D; COG: COG1077
genbank 81242706 ABB63416.1 367 3183783 3184886
143663 yhdA hypothetical SDY_3427 conserved hypothetical protein
Code: T; COG: COG2200; orf
genbank 81242707 ABB63417.1 646 3185131 3187071
143664 yhdH hypothetical SDY_3428 putative dehydrogenase
Code: CR; COG: COG0604
genbank 81242708 ABB63418.1 324 3187223 3188197
143665 hypothetical SDY_3430 conserved hypothetical protein
orf
genbank 81242710 ABB63420.1 33 3188255 3188356
143666 hypothetical SDY_3429 hypothetical protein
orf
genbank 81242709 ABB63419.1 241 3188339 3189064
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143667 hypothetical SDY_3431 conserved hypothetical protein
orf
genbank 81242711 ABB63421.1 39 3189238 3189357
143668 accB hypothetical SDY_3432 acetylCoA carboxylase, BCCP subunit
carrier of biotin; Code: I; COG: COG0511
genbank 81242712 ABB63422.1 156 3189930 3190400
143669 accC hypothetical SDY_3433 acetyl CoA carboxylase, biotin carboxylase subunit
Code: I; COG: COG0439
genbank 81242713 ABB63423.1 449 3190411 3191760
143670 yhdT hypothetical SDY_3434 conserved hypothetical protein
Code: S; COG: COG3924; orf
genbank 81242714 ABB63424.1 80 3191869 3192111
143671 panF hypothetical SDY_3435 sodium/pantothenate symporter
Code: H; COG: COG4145
genbank 81242715 ABB63425.1 485 3192095 3193552
143672 prmA hypothetical SDY_3436 methylase for 50S ribosomal subunit protein L11
Code: J; COG: COG2264
genbank 81242716 ABB63426.1 293 3193564 3194445
143673 yhdG hypothetical SDY_3437 putative dehydrogenase
Code: J; COG: COG0042
genbank 81242717 ABB63427.1 321 3194774 3195739
143674 fis hypothetical SDY_3438 site-specific DNA inversion stimulation factor
DNA-binding protein; a trans activator for transcription; Code: KL; COG: COG2901
genbank 81242718 ABB63428.1 98 3195765 3196061
143675 insA hypothetical SDY_3440 IS1 ORF1
Code: L; COG: COG3677
genbank 81242719 ABB63429.1 91 3196778 3197053
143676 insB hypothetical SDY_3441 IS1 ORF2
Code: L; COG: COG1662
genbank 81242720 ABB63430.1 125 3197098 3197475
143677 acrF_1 hypothetical SDY_3443 N-terminal fragment of integral transmembrane protein involved with acridine resistance
Code: V; COG: COG0841
genbank 81242721 ABB63431.1 569 3198529 3200238
143678 insA hypothetical SDY_3444 IS1 ORF1
Code: L; COG: COG3677
genbank 81242722 ABB63432.1 91 3201152 3201427
143679 yhdW hypothetical SDY_3445 putative periplasmic binding transport protein
Code: ET; COG: COG0834
genbank 81242723 ABB63433.1 305 3201757 3202674
143680 yhdY hypothetical SDY_3447 putative transport system permease protein
Code: E; COG: COG0765
genbank 81242724 ABB63434.1 368 3203930 3205036
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
143681 yrdA hypothetical SDY_3456 putative transferase
Code: R; COG: COG0663
genbank 81242725 ABB63435.1 256 3211456 3212226


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