files

Summary of the tRNAs found by tRNAscan-se

Amino Acid	Count
Ala	4
Arg	7
Asn	3
Asp	5
Cys	2
Gln	3
Glu	6
Gly	8
His	3
Ile	5
Leu	8
Lys	5
Met	11
Phe	5
Pro	5
Pseudo	2
SeC(p)	1
Ser	5
Thr	6
Trp	2
Tyr	3
Undet	0
Val	7

List of tRNAs found by tRNAscan-se

Amino Acid	Anticodon	Contig	tRNA	tRNA Location	Intron Location	Cove Score	HMM Score
Ala	GGC	Contig55	32	3221892..3221967	0..0	88.39	66.12
Ala	TGC	Contig55	16	1838777..1838852	0..0	91.34	76.14
Ala	TGC	Contig55	3	50461 ..50536	0..0	91.34	76.14
Ala	TGC	Contig55	44	4450559..4450484	0..0	91.34	76.14
Arg	ACG	Contig55	29	1843948..1844024	0..0	87.34	65.45
Arg	CCT	Contig55	1	38852 ..38928	0..0	84.68	60.82
Arg	TCG	Contig55	11	997239 ..997315	0..0	84.18	67.36
Arg	TCT	Contig55	10	997147 ..997223	0..0	83.94	60.05
Arg	TCT	Contig55	39	4452941..4452865	0..0	88.53	64.63
Arg	TCT	Contig55	6	996725 ..996801	0..0	83.94	60.05
Arg	TCT	Contig55	73	4437555..4437479	0..0	88.53	64.63
Asn	GTT	Contig55	17	1842385..1842459	0..0	80.01	55.96
Asn	GTT	Contig55	45	4447075..4447001	0..0	80.01	55.96
Asn	GTT	Contig55	89	4430624..4430550	0..0	80.01	55.96
Asp	GTC	Contig55	23	1843020..1843096	0..0	88.33	66.29
Asp	GTC	Contig55	50	4446522..4446446	0..0	88.33	66.29
Asp	GTC	Contig55	70	4437811..4437735	0..0	88.33	66.29
Asp	GTC	Contig55	86	4436263..4436187	0..0	88.33	66.29
Asp	GTC	Contig55	94	4430069..4429993	0..0	88.33	66.29
Cys	GCA	Contig55	15	1715478..1715552	0..0	77.86	44.65
Cys	GCA	Contig55	28	1843869..1843943	0..0	77.86	44.65
Gln	TTG	Contig55	40	4452858..4452783	0..0	80.59	54.54
Gln	TTG	Contig55	74	4437472..4437397	0..0	80.59	54.54
Gln	TTG	Contig55	9	997036 ..997111	0..0	80.59	54.54
Glu	TTC	Contig55	21	1842736..1842810	0..0	73.83	48.44
Glu	TTC	Contig55	34	4894664..4894590	0..0	73.83	48.44
Glu	TTC	Contig55	35	4453403..4453329	0..0	73.83	48.44
Glu	TTC	Contig55	48	4446810..4446736	0..0	73.83	48.44
Glu	TTC	Contig55	68	4438099..4438025	0..0	73.83	48.44
Glu	TTC	Contig55	92	4430358..4430284	0..0	73.83	48.44
Gly	GCC	Contig55	26	1843694..1843768	0..0	91.02	68.02
Gly	GCC	Contig55	54	4446065..4445991	0..0	91.02	68.02
Gly	GCC	Contig55	98	4429559..4429485	0..0	91.02	68.02
Gly	TCC	Contig55	38	4453023..4452950	0..0	75.29	56.95
Gly	TCC	Contig55	5	996643 ..996716	0..0	75.29	56.95
Gly	TCC	Contig55	66	4444833..4444760	0..0	75.29	56.95
Gly	TCC	Contig55	72	4437637..4437564	0..0	75.29	56.95
Gly	TCC	Contig55	88	4436089..4436016	0..0	75.29	56.95
His	GTG	Contig55	27	1843781..1843856	0..0	72.34	47.85
His	GTG	Contig55	7	996844 ..996919	0..0	72.34	47.85
His	GTG	Contig55	8	996956 ..997031	0..0	72.34	47.85
Ile	GAT	Contig55	100	4429399..4429323	0..0	98.59	74.81
Ile	GAT	Contig55	42	4452698..4452622	0..0	98.59	74.81
Ile	GAT	Contig55	4	56089 ..56165	0..0	98.59	74.81
Ile	GAT	Contig55	62	4445344..4445268	0..0	98.59	74.81
Ile	GAT	Contig55	82	4436750..4436674	0..0	98.59	74.81
Leu	CAA	Contig55	31	3174464..3174550	0..0	78.62	47.22
Leu	GAG	Contig55	104	3165365..3165279	0..0	63.50	36.67
Leu	TAA	Contig55	18	1842465..1842553	0..0	77.53	48.77
Leu	TAA	Contig55	46	4446995..4446907	0..0	77.53	48.77
Leu	TAA	Contig55	90	4430544..4430456	0..0	77.53	48.77
Leu	TAG	Contig55	25	1843290..1843372	0..0	78.64	54.52
Leu	TAG	Contig55	53	4446175..4446093	0..0	78.64	54.52
Leu	TAG	Contig55	97	4429669..4429587	0..0	78.64	54.52
Lys	TTT	Contig55	33	4894793..4894718	0..0	88.29	55.98
Lys	TTT	Contig55	41	4452778..4452703	0..0	88.29	55.98
Lys	TTT	Contig55	55	4445986..4445911	0..0	88.29	55.98
Lys	TTT	Contig55	75	4437392..4437317	0..0	88.29	55.98
Lys	TTT	Contig55	99	4429480..4429405	0..0	88.29	55.98
Met	CAT	Contig55	19	1842569..1842644	0..0	80.09	66.04
Met	CAT	Contig55	20	1842650..1842726	0..0	89.47	67.63
Met	CAT	Contig55	47	4446892..4446817	0..0	88.48	63.99
Met	CAT	Contig55	59	4445607..4445531	0..0	95.67	75.82
Met	CAT	Contig55	64	4445105..4445030	0..0	82.53	63.87
Met	CAT	Contig55	65	4444946..4444870	0..0	86.42	64.58
Met	CAT	Contig55	67	4438181..4438106	0..0	88.48	63.99
Met	CAT	Contig55	79	4437013..4436937	0..0	95.67	75.82
Met	CAT	Contig55	84	4436511..4436436	0..0	79.52	60.86
Met	CAT	Contig55	85	4436352..4436276	0..0	89.47	67.63
Met	CAT	Contig55	91	4430440..4430365	0..0	88.48	63.99
Phe	GAA	Contig55	101	4429313..4429238	0..0	87.43	64.60
Phe	GAA	Contig55	14	1715384..1715459	0..0	87.43	64.60
Phe	GAA	Contig55	43	4452612..4452537	0..0	87.43	64.60
Phe	GAA	Contig55	63	4445258..4445183	0..0	87.43	64.60
Phe	GAA	Contig55	83	4436664..4436589	0..0	87.43	64.60
Pro	GGG	Contig55	105	2867859..2867783	0..0	84.34	59.15
Pro	TGG	Contig55	58	4445698..4445622	0..0	90.59	65.92
Pro	TGG	Contig55	61	4445426..4445350	0..0	90.59	65.92
Pro	TGG	Contig55	78	4437104..4437028	0..0	90.59	65.92
Pro	TGG	Contig55	81	4436832..4436756	0..0	90.59	65.92
Pseudo	CGA	Contig55	106	2847546..2847478	0..0	33.89	31.67
Pseudo	TCG	Contig55	12	1009021..1009100	0..0	25.68	22.09
SeC(p)	TCA	Contig55	30	2399957..2400049	0..0	27.20	0.00
Ser	GCT	Contig55	57	4445799..4445708	0..0	73.42	36.76
Ser	GCT	Contig55	77	4437205..4437114	0..0	73.42	36.76
Ser	GGA	Contig55	2	39483 ..39570	0..0	69.03	37.98
Ser	TGA	Contig55	56	4445902..4445814	0..0	72.53	34.40
Ser	TGA	Contig55	76	4437308..4437220	0..0	72.53	34.40
Thr	GGT	Contig55	102	3362174..3362100	0..0	86.63	63.42
Thr	TGT	Contig55	37	4453107..4453032	0..0	88.94	72.90
Thr	TGT	Contig55	51	4446432..4446357	0..0	90.83	74.79
Thr	TGT	Contig55	71	4437721..4437646	0..0	88.94	72.90
Thr	TGT	Contig55	87	4436173..4436098	0..0	88.94	72.90
Thr	TGT	Contig55	95	4429979..4429904	0..0	90.83	74.79
Trp	CCA	Contig55	60	4445508..4445433	0..0	83.41	61.58
Trp	CCA	Contig55	80	4436914..4436839	0..0	83.41	61.58
Tyr	GTA	Contig55	24	1843166..1843250	0..0	63.18	41.62
Tyr	GTA	Contig55	52	4446344..4446260	0..0	63.18	41.62
Tyr	GTA	Contig55	96	4429891..4429807	0..0	63.18	41.62
Val	GAC	Contig55	103	3237075..3236999	0..0	87.26	68.37
Val	TAC	Contig55	13	1715308..1715383	0..0	94.51	79.83
Val	TAC	Contig55	22	1842819..1842894	0..0	99.35	80.58
Val	TAC	Contig55	36	4453316..4453241	0..0	99.35	80.58
Val	TAC	Contig55	49	4446723..4446648	0..0	99.35	80.58
Val	TAC	Contig55	69	4438012..4437937	0..0	99.35	80.58
Val	TAC	Contig55	93	4430271..4430196	0..0	99.35	80.58

tRNA Models

Contig55.trna1 (38852-38928)	Length: 77 bp
Type: Arg	Anticodon: CCT at 35-37 (38886-38888)	Score: 84.68
HMM Sc=60.82	Sec struct Sc=23.86
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GCACCTATAGCTCAGTAGGAtAGAGCAACGGTTTCCTAAACCGTGTGcCGGAGGTTCGAATCCTCCTAGGTGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna2 (39483-39570)	Length: 88 bp
Type: Ser	Anticodon: GGA at 34-36 (39516-39518)	Score: 69.03
HMM Sc=37.98	Sec struct Sc=31.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *  
Seq: GGAGAGGTGACCGAGTGGCtAAGGGGCACGCCTGGAAAGCGTGTAAGGCTGAAAGGCCCCGCGGGTTCGAGTCCCGCTCTCTCCGCCA
Str: >>>>>>>...>>..........<<..>>>>>.......<<<<<...>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna3 (50461-50536)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (50494-50496)	Score: 91.34
HMM Sc=76.14	Sec struct Sc=15.20
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGGGCGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGtCAGGAGTTCGACTCTCCTCGTCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna4 (56089-56165)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (56123-56125)	Score: 98.59
HMM Sc=74.81	Sec struct Sc=23.78
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTTGAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna5 (996643-996716)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (996675-996677)	Score: 75.29
HMM Sc=56.95	Sec struct Sc=18.34
         *    |    *    |    *    |    *    |    *    |    *    |    *    |   
Seq: GCGGGTGTAGTTTAGTGGTAGAACTTCAGCCTTCCAAGCTGATCGCGAGGGTTCGATTCCCTCTACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna6 (996725-996801)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (996759-996761)	Score: 83.94
HMM Sc=60.05	Sec struct Sc=23.89
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GTGCTCATAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTAGGcCCGGGGTTCGAATCCCTGTGGGCACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna7 (996844-996919)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (996877-996879)	Score: 72.34
HMM Sc=47.85	Sec struct Sc=24.49
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCGGGTGTAGTCAAGTGGTtAAGACACAGGATTGTGGTTCCTGCATgCGTGGGTTCGAACCCCATCACCCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna8 (996956-997031)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (996989-996991)	Score: 72.34
HMM Sc=47.85	Sec struct Sc=24.49
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCGGGTGTAGTCAAGTGGTtAAGACACAGGATTGTGGTTCCTGCATgCGTGGGTTCGAACCCCATCACCCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna9 (997036-997111)	Length: 76 bp
Type: Gln	Anticodon: TTG at 34-36 (997069-997071)	Score: 80.59
HMM Sc=54.54	Sec struct Sc=26.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: TGGGATATAGCCAAGTCGGTAAGGCAACGGACTTTGACTCCGTCATcCGCAGGTTCGAGTCCTGCTATCCCAGCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna10 (997147-997223)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (997181-997183)	Score: 83.94
HMM Sc=60.05	Sec struct Sc=23.89
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GTGCTCATAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTAGGcCCGGGGTTCGAATCCCTGTGGGCACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna11 (997239-997315)	Length: 77 bp
Type: Arg	Anticodon: TCG at 35-37 (997273-997275)	Score: 84.18
HMM Sc=67.36	Sec struct Sc=16.82
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GCGCCTTTAGCTCAGCTGGAtAGAGTTGCAGACTTCGAATCTGAAGGtCGGGGGTTCGAATCCCTCAAGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

Contig55.trna12 (1009021-1009100)	Length: 80 bp
Type: Arg	Anticodon: TCG at 38-40 (1009058-1009060)	Score: 25.68
Possible pseudogene:  HMM Sc=22.09	Sec struct Sc=3.59
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    
Seq: GCGTTATaaATCTCAATGATacAAAGAAccTCAAACTTCGAATCTGAAGGtCGGGGGTTCGAATCCCTCAAGGCGCGCCA
Str: >>>>>.>...>>>...........<<<...>>>.>.......<.<<<.....>>>>>.......<<<<<<.<<<<<....

Contig55.trna13 (1715308-1715383)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (1715341-1715343)	Score: 94.51
HMM Sc=79.83	Sec struct Sc=14.68
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGCACATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGCGCCCACCA
Str: >>>>.>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<.<<<<....

Contig55.trna14 (1715384-1715459)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (1715417-1715419)	Score: 87.43
HMM Sc=64.60	Sec struct Sc=22.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCCCAGATAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGtCGGTGGTTCGATTCCGCCTCTGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna15 (1715478-1715552)	Length: 75 bp
Type: Cys	Anticodon: GCA at 33-35 (1715510-1715512)	Score: 77.86
HMM Sc=44.65	Sec struct Sc=33.21
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCTATtCCCCAGTTCAAATCTGGGTGCCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna16 (1838777-1838852)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (1838810-1838812)	Score: 91.34
HMM Sc=76.14	Sec struct Sc=15.20
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGGGCGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGtCAGGAGTTCGACTCTCCTCGTCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna17 (1842385-1842459)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (1842417-1842419)	Score: 80.01
HMM Sc=55.96	Sec struct Sc=24.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: TCCTGGGTAGCTCAATGGTGGAGCATTCGGCTGTTAACCGACAGGtTGGAGGTTCGAGTCCTCTCCCAGGAGCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

Contig55.trna18 (1842465-1842553)	Length: 89 bp
Type: Leu	Anticodon: TAA at 35-37 (1842499-1842501)	Score: 77.53
HMM Sc=48.77	Sec struct Sc=28.76
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *   
Seq: GCCGAAGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTCCTTCAaGATCGTACCGGTTCGATTCCGGTCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>..>.....<..<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna19 (1842569-1842644)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (1842602-1842604)	Score: 80.09
HMM Sc=66.04	Sec struct Sc=14.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: CGCGGGGTGGAGCAACTGGTAGCTCGTCGGGCTCATAATCCGAAGGtCGCAGGTTCGAATCCTGTCTCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

Contig55.trna20 (1842650-1842726)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (1842684-1842686)	Score: 89.47
HMM Sc=67.63	Sec struct Sc=21.84
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCGGCATAGCTCAGCTGGCtAGAGCGTTCGGTTCATACCCGAAAGGtCACAGGTTCGACTCCTGTTGCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna21 (1842736-1842810)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (1842769-1842771)	Score: 73.83
HMM Sc=48.44	Sec struct Sc=25.39
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCCCCTTGGTCAAGCGGTcAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTCCCCTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna22 (1842819-1842894)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (1842852-1842854)	Score: 99.35
HMM Sc=80.58	Sec struct Sc=18.77
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna23 (1843020-1843096)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (1843054-1843056)	Score: 88.33
HMM Sc=66.29	Sec struct Sc=22.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCCTGGTAGTTCAGTTGGTtAGAATGCCAGCCTGTCACGCTGGAGGtCGAGGGTTCGAGTCCCTTCCAGGTCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna24 (1843166-1843250)	Length: 85 bp
Type: Tyr	Anticodon: GTA at 35-37 (1843200-1843202)	Score: 63.18
HMM Sc=41.62	Sec struct Sc=21.56
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGAGGGGTTCCCGAGCGGCcaAAGGGGGCAGACTGTAAATCTGTTGTCAGCGACTtCGAAGGTTCGAATCCTTCTCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.><<<<...>>>>>.......<<<<<<<<<<<<....

Contig55.trna25 (1843290-1843372)	Length: 83 bp
Type: Leu	Anticodon: TAG at 35-37 (1843324-1843326)	Score: 78.64
HMM Sc=54.52	Sec struct Sc=24.12
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |  
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACTAGACTTAGGATCTAGCGGGCGACCGTGGGGGTTCAAGTCCCTCCACCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>.><.<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna26 (1843694-1843768)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (1843726-1843728)	Score: 91.02
HMM Sc=68.02	Sec struct Sc=23.00
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGtCGCGAGTTCAAATCTCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna27 (1843781-1843856)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (1843814-1843816)	Score: 72.34
HMM Sc=47.85	Sec struct Sc=24.49
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCGGGTGTAGTCAAGTGGTtAAGACACAGGATTGTGGTTCCTGCATgCGTGGGTTCGAACCCCATCACCCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna28 (1843869-1843943)	Length: 75 bp
Type: Cys	Anticodon: GCA at 33-35 (1843901-1843903)	Score: 77.86
HMM Sc=44.65	Sec struct Sc=33.21
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTCTATtCCCCAGTTCAAATCTGGGTGCCGCCTCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna29 (1843948-1844024)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (1843982-1843984)	Score: 87.34
HMM Sc=65.45	Sec struct Sc=21.89
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GCGCCCATAGCTCAGCTGGAtAGAGTGTCTGACTACGAATCAGAAGGtCGGGAGTTCGAATCTCTCTGGGCGCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna30 (2399957-2400049)	Length: 93 bp
Type: SeC(p)	Anticodon: TCA at 35-37 (2399991-2399993)	Score: 27.20
HMM Sc=0.00	Sec struct Sc=0.00
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |  
Seq: GGGGGTAGATGGGTTCTGGTGTGCCCTCTGGTCTTCAAAACCAGCGCGAGGGGTTAGtAGCCTCTTGGGTGGGTTCGATTCCCACGTACTCCC
Str: >>>>>>>...>>>>.>....<.<<<<.>>>>>.......<<<<<..>>>>>>>>.....<<<<<<<<.>>>>>.......<<<<<.<<<<<<<

Contig55.trna31 (3174464-3174550)	Length: 87 bp
Type: Leu	Anticodon: CAA at 35-37 (3174498-3174500)	Score: 78.62
HMM Sc=47.22	Sec struct Sc=31.40
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GCCGCGGTGGCGGAACTGGCaGACGCAGCAGACTCAAAATCTGCCGATGGTAACATCGTGGGGGTTCGATTCCCTTCCGCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna32 (3221892-3221967)	Length: 76 bp
Type: Ala	Anticodon: GGC at 34-36 (3221925-3221927)	Score: 88.39
HMM Sc=66.12	Sec struct Sc=22.27
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGGCATTAGTTCAGTTGGGAGAACGCCACACTGGCAGTGTGGAGGtCAGCGGTTCGAGTCCGCTATGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna33 (4894793-4894718)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4894760-4894758)	Score: 88.29
HMM Sc=55.98	Sec struct Sc=32.31
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GACCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGtCCCGCGTTCGAGTCGCGGATGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna34 (4894664-4894590)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (4894631-4894629)	Score: 73.83
HMM Sc=48.44	Sec struct Sc=25.39
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCCCCTTGGTCAAGCGGTcAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTCCCCTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna35 (4453403-4453329)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (4453370-4453368)	Score: 73.83
HMM Sc=48.44	Sec struct Sc=25.39
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCCCCTTGGTCAAGCGGTcAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTCCCCTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna36 (4453316-4453241)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (4453283-4453281)	Score: 99.35
HMM Sc=80.58	Sec struct Sc=18.77
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna37 (4453107-4453032)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4453074-4453072)	Score: 88.94
HMM Sc=72.90	Sec struct Sc=16.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCTGGTGTAGCTCAATTGGCAGAGCAGCTGATTTGTAATCAGCAGGtCGCGGGTTCGAATCCCATCACCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

Contig55.trna38 (4453023-4452950)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (4452991-4452989)	Score: 75.29
HMM Sc=56.95	Sec struct Sc=18.34
         *    |    *    |    *    |    *    |    *    |    *    |    *    |   
Seq: GCGGGTGTAGTTTAGTGGTAGAACTTCAGCCTTCCAAGCTGATCGCGAGGGTTCGATTCCCTCTACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna39 (4452941-4452865)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (4452907-4452905)	Score: 88.53
HMM Sc=64.63	Sec struct Sc=23.90
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GTGCTCATAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTAGGtCCGGGGTTCGAATCCCTGTGGGCACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna40 (4452858-4452783)	Length: 76 bp
Type: Gln	Anticodon: TTG at 34-36 (4452825-4452823)	Score: 80.59
HMM Sc=54.54	Sec struct Sc=26.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: TGGGATATAGCCAAGTCGGTAAGGCAACGGACTTTGACTCCGTCATcCGCAGGTTCGAGTCCTGCTATCCCAGCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna41 (4452778-4452703)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4452745-4452743)	Score: 88.29
HMM Sc=55.98	Sec struct Sc=32.31
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GACCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGtCCCGCGTTCGAGTCGCGGATGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna42 (4452698-4452622)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (4452664-4452662)	Score: 98.59
HMM Sc=74.81	Sec struct Sc=23.78
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTTGAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna43 (4452612-4452537)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (4452579-4452577)	Score: 87.43
HMM Sc=64.60	Sec struct Sc=22.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCCCAGATAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGtCGGTGGTTCGATTCCGCCTCTGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna44 (4450559-4450484)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (4450526-4450524)	Score: 91.34
HMM Sc=76.14	Sec struct Sc=15.20
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGGGCGTAGCTCAGTTGGGAGAGCACCTGCCTTGCAAGCAGGGGGtCAGGAGTTCGACTCTCCTCGTCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna45 (4447075-4447001)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (4447043-4447041)	Score: 80.01
HMM Sc=55.96	Sec struct Sc=24.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: TCCTGGGTAGCTCAATGGTGGAGCATTCGGCTGTTAACCGACAGGtTGGAGGTTCGAGTCCTCTCCCAGGAGCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

Contig55.trna46 (4446995-4446907)	Length: 89 bp
Type: Leu	Anticodon: TAA at 35-37 (4446961-4446959)	Score: 77.53
HMM Sc=48.77	Sec struct Sc=28.76
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *   
Seq: GCCGAAGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTCCTTCAaGATCGTACCGGTTCGATTCCGGTCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>..>.....<..<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna47 (4446892-4446817)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (4446859-4446857)	Score: 88.48
HMM Sc=63.99	Sec struct Sc=24.49
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: CGCGGGGTGGAGCAACTGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCGAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

Contig55.trna48 (4446810-4446736)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (4446777-4446775)	Score: 73.83
HMM Sc=48.44	Sec struct Sc=25.39
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCCCCTTGGTCAAGCGGTcAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTCCCCTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna49 (4446723-4446648)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (4446690-4446688)	Score: 99.35
HMM Sc=80.58	Sec struct Sc=18.77
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna50 (4446522-4446446)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (4446488-4446486)	Score: 88.33
HMM Sc=66.29	Sec struct Sc=22.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCCTGGTAGTTCAGTTGGTtAGAATGCCAGCCTGTCACGCTGGAGGtCGAGGGTTCGAGTCCCTTCCAGGTCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna51 (4446432-4446357)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4446399-4446397)	Score: 90.83
HMM Sc=74.79	Sec struct Sc=16.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCTGGTGTAGCTCAATTGGTAGAGCAGCTGATTTGTAATCAGCAGGtCGCGGGTTCGAATCCCATCACCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

Contig55.trna52 (4446344-4446260)	Length: 85 bp
Type: Tyr	Anticodon: GTA at 35-37 (4446310-4446308)	Score: 63.18
HMM Sc=41.62	Sec struct Sc=21.56
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGAGGGGTTCCCGAGCGGCcaAAGGGGGCAGACTGTAAATCTGTTGTCAGCGACTtCGAAGGTTCGAATCCTTCTCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.><<<<...>>>>>.......<<<<<<<<<<<<....

Contig55.trna53 (4446175-4446093)	Length: 83 bp
Type: Leu	Anticodon: TAG at 35-37 (4446141-4446139)	Score: 78.64
HMM Sc=54.52	Sec struct Sc=24.12
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |  
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACTAGACTTAGGATCTAGCGGGCGACCGTGGGGGTTCAAGTCCCTCCACCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>.><.<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna54 (4446065-4445991)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (4446033-4446031)	Score: 91.02
HMM Sc=68.02	Sec struct Sc=23.00
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGtCGCGAGTTCAAATCTCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna55 (4445986-4445911)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4445953-4445951)	Score: 88.29
HMM Sc=55.98	Sec struct Sc=32.31
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GACCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGtCCCGCGTTCGAGTCGCGGATGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna56 (4445902-4445814)	Length: 89 bp
Type: Ser	Anticodon: TGA at 35-37 (4445868-4445866)	Score: 72.53
HMM Sc=34.40	Sec struct Sc=38.13
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *   
Seq: GGAGAGGTGTCCGAGCGGTttAAGGAGCTAGTCTTGAAAACTAGTGATTCTGAAAGGGACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna57 (4445799-4445708)	Length: 92 bp
Type: Ser	Anticodon: GCT at 36-38 (4445764-4445762)	Score: 73.42
HMM Sc=36.76	Sec struct Sc=36.66
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    | 
Seq: GGAGAAGTACTCAAGTAGGCtcAAGAGGACGGTTTGCTAAACCGTTAGGTCGTGTATGCGGCGCGCGGGTTCGAATCCCGCCTTCTCCGCCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna58 (4445698-4445622)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (4445664-4445662)	Score: 90.59
HMM Sc=65.92	Sec struct Sc=24.67
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: CCGGGTGTAGCGCAGTTtGGTAGCGCACATGGTTTGGGACCATGGGGtCGGGAGTTCGAATCTCTTCACCCGGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna59 (4445607-4445531)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4445573-4445571)	Score: 95.67
HMM Sc=75.82	Sec struct Sc=19.85
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCCTTTAGCTCAGTTGGTtAGAGCGTCCGGCTCATAACCGGCAGGtCCGGGGTTCGAATCCCTGAAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

Contig55.trna60 (4445508-4445433)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (4445475-4445473)	Score: 83.41
HMM Sc=61.58	Sec struct Sc=21.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: AGGGGTGTAGTTCAGTTGGTAGAACAGTGGTCTCCAAAACCACGTGtCGTGGGTTCAAATCCTGTCACCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna61 (4445426-4445350)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (4445392-4445390)	Score: 90.59
HMM Sc=65.92	Sec struct Sc=24.67
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: CCGGGTGTAGCGCAGTTtGGTAGCGCACATGGTTTGGGACCATGGGGtCGGGAGTTCGAATCTCTTCACCCGGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna62 (4445344-4445268)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (4445310-4445308)	Score: 98.59
HMM Sc=74.81	Sec struct Sc=23.78
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTTGAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna63 (4445258-4445183)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (4445225-4445223)	Score: 87.43
HMM Sc=64.60	Sec struct Sc=22.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCCCAGATAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGtCGGTGGTTCGATTCCGCCTCTGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna64 (4445105-4445030)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (4445072-4445070)	Score: 82.53
HMM Sc=63.87	Sec struct Sc=18.66
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: CGCGGGGTGGAGCAACTGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCGAATCCTGCCTCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

Contig55.trna65 (4444946-4444870)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4444912-4444910)	Score: 86.42
HMM Sc=64.58	Sec struct Sc=21.84
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCGGCATAGCTCAGATGGCtAGAGCGTTCGGTTCATACCCGAAAGGtCACAGGTTCGACTCCTGTTGCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna66 (4444833-4444760)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (4444801-4444799)	Score: 75.29
HMM Sc=56.95	Sec struct Sc=18.34
         *    |    *    |    *    |    *    |    *    |    *    |    *    |   
Seq: GCGGGTGTAGTTTAGTGGTAGAACTTCAGCCTTCCAAGCTGATCGCGAGGGTTCGATTCCCTCTACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna67 (4438181-4438106)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (4438148-4438146)	Score: 88.48
HMM Sc=63.99	Sec struct Sc=24.49
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: CGCGGGGTGGAGCAACTGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCGAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

Contig55.trna68 (4438099-4438025)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (4438066-4438064)	Score: 73.83
HMM Sc=48.44	Sec struct Sc=25.39
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCCCCTTGGTCAAGCGGTcAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTCCCCTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna69 (4438012-4437937)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (4437979-4437977)	Score: 99.35
HMM Sc=80.58	Sec struct Sc=18.77
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna70 (4437811-4437735)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (4437777-4437775)	Score: 88.33
HMM Sc=66.29	Sec struct Sc=22.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCCTGGTAGTTCAGTTGGTtAGAATGCCAGCCTGTCACGCTGGAGGtCGAGGGTTCGAGTCCCTTCCAGGTCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna71 (4437721-4437646)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4437688-4437686)	Score: 88.94
HMM Sc=72.90	Sec struct Sc=16.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCTGGTGTAGCTCAATTGGCAGAGCAGCTGATTTGTAATCAGCAGGtCGCGGGTTCGAATCCCATCACCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

Contig55.trna72 (4437637-4437564)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (4437605-4437603)	Score: 75.29
HMM Sc=56.95	Sec struct Sc=18.34
         *    |    *    |    *    |    *    |    *    |    *    |    *    |   
Seq: GCGGGTGTAGTTTAGTGGTAGAACTTCAGCCTTCCAAGCTGATCGCGAGGGTTCGATTCCCTCTACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna73 (4437555-4437479)	Length: 77 bp
Type: Arg	Anticodon: TCT at 35-37 (4437521-4437519)	Score: 88.53
HMM Sc=64.63	Sec struct Sc=23.90
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GTGCTCATAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTAGGtCCGGGGTTCGAATCCCTGTGGGCACGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna74 (4437472-4437397)	Length: 76 bp
Type: Gln	Anticodon: TTG at 34-36 (4437439-4437437)	Score: 80.59
HMM Sc=54.54	Sec struct Sc=26.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: TGGGATATAGCCAAGTCGGTAAGGCAACGGACTTTGACTCCGTCATcCGCAGGTTCGAGTCCTGCTATCCCAGCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna75 (4437392-4437317)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4437359-4437357)	Score: 88.29
HMM Sc=55.98	Sec struct Sc=32.31
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GACCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGtCCCGCGTTCGAGTCGCGGATGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna76 (4437308-4437220)	Length: 89 bp
Type: Ser	Anticodon: TGA at 35-37 (4437274-4437272)	Score: 72.53
HMM Sc=34.40	Sec struct Sc=38.13
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *   
Seq: GGAGAGGTGTCCGAGCGGTttAAGGAGCTAGTCTTGAAAACTAGTGATTCTGAAAGGGACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna77 (4437205-4437114)	Length: 92 bp
Type: Ser	Anticodon: GCT at 36-38 (4437170-4437168)	Score: 73.42
HMM Sc=36.76	Sec struct Sc=36.66
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    | 
Seq: GGAGAAGTACTCAAGTAGGCtcAAGAGGACGGTTTGCTAAACCGTTAGGTCGTGTATGCGGCGCGCGGGTTCGAATCCCGCCTTCTCCGCCA
Str: >>>>>>>..>>>............<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna78 (4437104-4437028)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (4437070-4437068)	Score: 90.59
HMM Sc=65.92	Sec struct Sc=24.67
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: CCGGGTGTAGCGCAGTTtGGTAGCGCACATGGTTTGGGACCATGGGGtCGGGAGTTCGAATCTCTTCACCCGGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna79 (4437013-4436937)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4436979-4436977)	Score: 95.67
HMM Sc=75.82	Sec struct Sc=19.85
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCCTTTAGCTCAGTTGGTtAGAGCGTCCGGCTCATAACCGGCAGGtCCGGGGTTCGAATCCCTGAAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

Contig55.trna80 (4436914-4436839)	Length: 76 bp
Type: Trp	Anticodon: CCA at 34-36 (4436881-4436879)	Score: 83.41
HMM Sc=61.58	Sec struct Sc=21.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: AGGGGTGTAGTTCAGTTGGTAGAACAGTGGTCTCCAAAACCACGTGtCGTGGGTTCAAATCCTGTCACCCCTGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna81 (4436832-4436756)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (4436798-4436796)	Score: 90.59
HMM Sc=65.92	Sec struct Sc=24.67
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: CCGGGTGTAGCGCAGTTtGGTAGCGCACATGGTTTGGGACCATGGGGtCGGGAGTTCGAATCTCTTCACCCGGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna82 (4436750-4436674)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (4436716-4436714)	Score: 98.59
HMM Sc=74.81	Sec struct Sc=23.78
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTTGAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna83 (4436664-4436589)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (4436631-4436629)	Score: 87.43
HMM Sc=64.60	Sec struct Sc=22.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCCCAGATAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGtCGGTGGTTCGATTCCGCCTCTGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna84 (4436511-4436436)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (4436478-4436476)	Score: 79.52
HMM Sc=60.86	Sec struct Sc=18.66
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: CGCGGGGTGGAGCAACTGGTAGCTCGTCGGGCTCATAACCCGAAGGtTGTAGGTTCAAATCCTGCCTCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

Contig55.trna85 (4436352-4436276)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (4436318-4436316)	Score: 89.47
HMM Sc=67.63	Sec struct Sc=21.84
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCGGCATAGCTCAGCTGGCtAGAGCGTTCGGTTCATACCCGAAAGGtCACAGGTTCGACTCCTGTTGCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna86 (4436263-4436187)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (4436229-4436227)	Score: 88.33
HMM Sc=66.29	Sec struct Sc=22.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCCTGGTAGTTCAGTTGGTtAGAATGCCAGCCTGTCACGCTGGAGGtCGAGGGTTCGAGTCCCTTCCAGGTCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna87 (4436173-4436098)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4436140-4436138)	Score: 88.94
HMM Sc=72.90	Sec struct Sc=16.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCTGGTGTAGCTCAATTGGCAGAGCAGCTGATTTGTAATCAGCAGGtCGCGGGTTCGAATCCCATCACCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

Contig55.trna88 (4436089-4436016)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (4436057-4436055)	Score: 75.29
HMM Sc=56.95	Sec struct Sc=18.34
         *    |    *    |    *    |    *    |    *    |    *    |    *    |   
Seq: GCGGGTGTAGTTTAGTGGTAGAACTTCAGCCTTCCAAGCTGATCGCGAGGGTTCGATTCCCTCTACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna89 (4430624-4430550)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (4430592-4430590)	Score: 80.01
HMM Sc=55.96	Sec struct Sc=24.05
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: TCCTGGGTAGCTCAATGGTGGAGCATTCGGCTGTTAACCGACAGGtTGGAGGTTCGAGTCCTCTCCCAGGAGCCA
Str: >>>>>>>..>>>>.......<<<<..>>>>.......<<<<......>>>>>.......<<<<<<<<<<<<....

Contig55.trna90 (4430544-4430456)	Length: 89 bp
Type: Leu	Anticodon: TAA at 35-37 (4430510-4430508)	Score: 77.53
HMM Sc=48.77	Sec struct Sc=28.76
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    *   
Seq: GCCGAAGTGGCGGAACTGGCaGACGCACAGGACTTAAAATCCTGCGGTCCTTCAaGATCGTACCGGTTCGATTCCGGTCTTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>..>.....<..<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna91 (4430440-4430365)	Length: 76 bp
Type: Met	Anticodon: CAT at 34-36 (4430407-4430405)	Score: 88.48
HMM Sc=63.99	Sec struct Sc=24.49
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: CGCGGGGTGGAGCAACTGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGTAGGTTCGAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

Contig55.trna92 (4430358-4430284)	Length: 75 bp
Type: Glu	Anticodon: TTC at 34-36 (4430325-4430323)	Score: 73.83
HMM Sc=48.44	Sec struct Sc=25.39
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGCCCCTTGGTCAAGCGGTcAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTCCCCTAGGGGTCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....

Contig55.trna93 (4430271-4430196)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (4430238-4430236)	Score: 99.35
HMM Sc=80.58	Sec struct Sc=18.77
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GGGCGCATAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGtCACAGGTTCGAGCCCTGTTGCGCCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna94 (4430069-4429993)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (4430035-4430033)	Score: 88.33
HMM Sc=66.29	Sec struct Sc=22.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGCCTGGTAGTTCAGTTGGTtAGAATGCCAGCCTGTCACGCTGGAGGtCGAGGGTTCGAGTCCCTTCCAGGTCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna95 (4429979-4429904)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (4429946-4429944)	Score: 90.83
HMM Sc=74.79	Sec struct Sc=16.04
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCTGGTGTAGCTCAATTGGTAGAGCAGCTGATTTGTAATCAGCAGGtCGCGGGTTCGAATCCCATCACCAGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>.>>>.......<<<.<<<<<<<<....

Contig55.trna96 (4429891-4429807)	Length: 85 bp
Type: Tyr	Anticodon: GTA at 35-37 (4429857-4429855)	Score: 63.18
HMM Sc=41.62	Sec struct Sc=21.56
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GGAGGGGTTCCCGAGCGGCcaAAGGGGGCAGACTGTAAATCTGTTGTCAGCGACTtCGAAGGTTCGAATCCTTCTCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.><<<<...>>>>>.......<<<<<<<<<<<<....

Contig55.trna97 (4429669-4429587)	Length: 83 bp
Type: Leu	Anticodon: TAG at 35-37 (4429635-4429633)	Score: 78.64
HMM Sc=54.52	Sec struct Sc=24.12
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |  
Seq: GCGGGTGTGGCGGAATTGGCaGACGCACTAGACTTAGGATCTAGCGGGCGACCGTGGGGGTTCAAGTCCCTCCACCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>.><.<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna98 (4429559-4429485)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (4429527-4429525)	Score: 91.02
HMM Sc=68.02	Sec struct Sc=23.00
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GCGGAAGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGtCGCGAGTTCAAATCTCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna99 (4429480-4429405)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4429447-4429445)	Score: 88.29
HMM Sc=55.98	Sec struct Sc=32.31
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GACCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGTGtCCCGCGTTCGAGTCGCGGATGGGTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna100 (4429399-4429323)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (4429365-4429363)	Score: 98.59
HMM Sc=74.81	Sec struct Sc=23.78
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGCTCATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTTGAGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna101 (4429313-4429238)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (4429280-4429278)	Score: 87.43
HMM Sc=64.60	Sec struct Sc=22.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *
Seq: GCCCAGATAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGtCGGTGGTTCGATTCCGCCTCTGGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna102 (3362174-3362100)	Length: 75 bp
Type: Thr	Anticodon: GGT at 33-35 (3362142-3362140)	Score: 86.63
HMM Sc=63.42	Sec struct Sc=23.21
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    
Seq: GCTGATGTGGCTCAGGGGTAGAGCACTTCCTTGGTAAGGAAGAGGtCGGCGGTTCAATTCCGCTCATCAGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna103 (3237075-3236999)	Length: 77 bp
Type: Val	Anticodon: GAC at 35-37 (3237041-3237039)	Score: 87.26
HMM Sc=68.37	Sec struct Sc=18.89
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GGGGAATTAGCTCAGCTGGCtAGAGTACTTGCTTGACATGCAAGGGGtCGATGGTTCGAGTCCATTATTTCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna104 (3165365-3165279)	Length: 87 bp
Type: Leu	Anticodon: GAG at 35-37 (3165331-3165329)	Score: 63.50
HMM Sc=36.67	Sec struct Sc=26.83
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: GCGGATATGGCGGAATTGGTaTACGCGTAGGCTTGAGGGGTCTATGAGCGAATGCTCGTGCAGGTTCGAGTCCTGTTATCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>..<<<<<..>>>>>.......<<<<<<<<<<<<....

Contig55.trna105 (2867859-2867783)	Length: 77 bp
Type: Pro	Anticodon: GGG at 35-37 (2867825-2867823)	Score: 84.34
HMM Sc=59.15	Sec struct Sc=25.19
         *    |    *    |    *    |    *    |    *    |    *    |    *    |    * 
Seq: CGGAGCGTGGCGCAGCTtGGTAGCGCGCATGGCTGGGGGCCATGAGGtCGCAGGTTCGAATCCTGTCGCTCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....

Contig55.trna106 (2847546-2847478)	Length: 69 bp
Type: Ser	Anticodon: CGA at 49-51 (2847498-2847496)	Score: 33.89
Possible pseudogene:  HMM Sc=31.67	Sec struct Sc=2.22
         *    |    *    |    *    |    *    |    *    |    *    |    *   
Seq: AGGGGTGTCAGGTAGCGCGCATGGCTGGGGGCCATGAGGtCGCAGGTTCGAATCCTGTCGCTCCGACCA
Str: .>>>>>>............>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....

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