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UGID:312566     UniGene Mm.216528     Mus musculus (mouse)   Vps29 Order cDNA clone, Links
Vacuolar protein sorting 29 (S. pombe) (Vps29)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001505645.1 PREDICTED: hypothetical protein O. anatinus 100.0 192
XP_213780.2 PREDICTED: similar to vacuolar protein sorting 29 isoform 2 R. norvegicus 100.0 185
XP_001107808.1 PREDICTED: similar to vacuolar protein sorting 29 isoform 2 isoform 2 M. mulatta 100.0 185
XP_001143558.1 PREDICTED: hypothetical protein isoform 1 P. troglodytes 100.0 185
NP_476528.1 vacuolar protein sorting 29 isoform 2 H. sapiens 100.0 185
XP_534675.1 PREDICTED: similar to vacuolar protein sorting 29 isoform 2 isoform 1 C. lupus familiaris 100.0 185
XP_001495149.1 PREDICTED: similar to vacuolar sorting protein VPS29 isoform 2 E. caballus 100.0 185
NP_001029627.1 vacuolar protein sorting 29 B. taurus 100.0 185
NP_062754.1 vacuolar protein sorting 29 M. musculus 100.0 181
NP_956331.1 vacuolar protein sorting 29 D. rerio 98.9 181
NP_001085746.1 MGC80657 protein X. laevis 98.9 181
NP_608575.1 CG4764 D. melanogaster 87.4 181
NP_974399.2 MAG1 (MAIGO 1); protein serine/threonine phosphatase A. thaliana 70.5 189
NP_001022988.1 related to yeast Vacuolar Protein Sorting factor family member (vps-29) C. elegans 66.3 190
XP_001690952.1 subunit of retromer complex C. reinhardtii 55.9 186
XP_328261.1 hypothetical protein N. crassa 49.3 215

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; mammary gland; liver; lymph node; tongue; prostate; testis; spinal cord; mixed; bone marrow; lung; eye; thymus; kidney; uncharacterized tissue; pancreas; ovary; skin; molar; extraembryonic tissue; heart; blood; muscle; intestine; pineal gland; pituitary gland; spleen; bone; inner ear; fertilized ovum
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5 F
UniSTS entry: Chr 5 AW049835
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK008248.1 Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010015D08 product:vacuolar protein sorting 29 (S. pombe), full insert sequence P
AK190221.1 Mus musculus cDNA, clone:Y1G0102B18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000031418, based on BLAT search
AK150330.1 Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830003B15 product:vacuolar protein sorting 29 (S. pombe), full insert sequence P
AK135699.1 Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420404L07 product:unclassifiable, full insert sequence P
AF193794.1 Mus musculus vacuolar sorting protein VPS29 mRNA, complete cds PA
NM_019780.1 Mus musculus vacuolar protein sorting 29 (S. pombe) (Vps29), mRNA PA
AK004103.1 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110035A10 product:vacuolar protein sorting 29 (S. pombe), full insert sequence P
BC005663.1 Mus musculus vacuolar protein sorting 29 (S. pombe), mRNA (cDNA clone MGC:11606 IMAGE:2645432), complete cds PA

EST sequences (10 of 326) [Show all sequences]

BY011007.1 Clone G730023H04 lung 5' read P
BY030041.1 Clone I0C0005L15 embryonic tissue 5' read P
BY041894.1 Clone I730020O19 thymus 5' read P
BY049699.1 Clone I730057C13 thymus 5' read
BY073345.1 Clone I920088O11 kidney 5' read P
BY080144.1 Clone K630023B15 embryonic tissue 5' read P
BY083751.1 Clone K630045B09 embryonic tissue 5' read P
BY084890.1 Clone K630050H08 extraembryonic tissue 5' read P
BY097261.1 Clone K630116C20 embryonic tissue 5' read P
BY139741.1 Clone L930124O15 embryonic tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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