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Finding cDNAs
UGID:132374     UniGene Hs.8619     Homo sapiens (human)   SOX18 Order cDNA clone, Links
SRY (sex determining region Y)-box 18 (SOX18)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_060889.1 SRY-box 18 H. sapiens 100.0 383
NP_033262.2 SRY-box containing gene 18 M. musculus 90.5 376
NP_001082102.1 xSox18alpha protein X. laevis 61.7 362
XP_001337702.1 PREDICTED: similar to transcription factor Sox18 D. rerio 55.1 420

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; ganglia; vascular; mixed; pancreas; ovary; brain; kidney; uncharacterized tissue; eye; lung; intestine; prostate; uterus; testis; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.33
UniSTS entry: Chr 20 RH102882
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

BC073971.1 Homo sapiens SRY (sex determining region Y)-box 18, mRNA (cDNA clone MGC:87946 IMAGE:6183010), complete cds PA
CR622805.1 full-length cDNA clone CS0DI060YC03 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR622272.1 full-length cDNA clone CS0DI060YM12 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR621620.1 full-length cDNA clone CS0DE007YF03 of Placenta of Homo sapiens (human) P
CR620118.1 full-length cDNA clone CS0DI012YE19 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR618677.1 full-length cDNA clone CS0DI041YP09 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR611852.1 full-length cDNA clone CS0DI075YC02 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR603832.1 full-length cDNA clone CS0DI068YC07 of Placenta Cot 25-normalized of Homo sapiens (human) P
CR601016.1 full-length cDNA clone CS0DC010YB10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) P
NM_018419.2 Homo sapiens SRY (sex determining region Y)-box 18 (SOX18), mRNA PA
AB033888.1 Homo sapiens SOX18 mRNA, complete cds P
AJ243896.1 Homo sapiens mRNA for SOX18 protein PA
AF270652.1 Homo sapiens Sry-related HMG-box protein (SOX18) mRNA, complete cds PA
BC111390.1 Homo sapiens SRY (sex determining region Y)-box 18, mRNA (cDNA clone MGC:102793 IMAGE:5751646), complete cds PA
BC035513.1 Homo sapiens cDNA clone IMAGE:5205004 PA
X65664.1 H.sapiens Sox-8 mRNA P
BC038590.1 Homo sapiens SRY (sex determining region Y)-box 18, mRNA (cDNA clone MGC:46062 IMAGE:5589289), complete cds PA

EST sequences (10 of 86) [Show all sequences]

BX101077.1 Clone IMAGp998P111856_;_IMAGE:755194 ovary A
AI214981.1 Clone IMAGE:1840116 testis 3' read A
AI434831.1 Clone IMAGE:2131065 kidney 3' read
AI459636.1 Clone IMAGE:2151883 intestine 3' read A
AI623795.1 Clone IMAGE:2229425 pancreas 3' read A
AI672322.1 Clone IMAGE:2283806 kidney 3' read A
AI675572.1 Clone IMAGE:2313977 prostate 3' read
AI744846.1 Clone IMAGE:2218429 ovary 3' read A
AL048407.1 Clone DKFZp586G0824 uterus A
AI863670.1 Clone IMAGE:2394313 intestine 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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