Ticket #171: configure.log

File configure.log, 77.2 kB (added by Eric Germaneau, 5 months ago)

Added by email2trac

Line 
1 Configuring MPICH2 version 1.0.7 with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs'
2 Running on system: Linux mtl13 2.6.24.5-smp #2 SMP Wed Apr 30 13:41:38 CDT 2008 i686 Intel(R) Pentium(R) 4 CPU 2.40GHz GenuineIntel GNU/Linux
3 Executing mpich2prereq in /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3 with
4 Executing mpich2prereq in /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/channels/sock
5 sourcing /home/u3/germaneau/soft/science/mpich2-1.0.7/src/pm/mpd/mpich2prereq
6 sourcing /home/u3/germaneau/soft/science/mpich2-1.0.7/src/pm/mpd/setup_pm
7 checking for gcc... gcc
8 checking for C compiler default output file name... a.out
9 checking whether the C compiler works... yes
10 checking whether we are cross compiling... no
11 checking for suffix of executables...
12 checking for suffix of object files... o
13 checking whether we are using the GNU C compiler... yes
14 checking whether gcc accepts -g... yes
15 checking for gcc option to accept ANSI C... none needed
16 checking whether C compiler accepts option -O2... yes
17 checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
18 checking for type of weak symbol support... pragma weak
19 checking whether __attribute__ ((weak)) allowed... yes
20 checking for multiple weak symbol support... yes
21 checking for g77... g77
22 checking whether we are using the GNU Fortran 77 compiler... yes
23 checking whether g77 accepts -g... yes
24 checking whether Fortran 77 compiler accepts option -O2... yes
25 checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
26 checking how to get verbose linking output from g77... -v
27 checking for Fortran libraries of g77...  -L/home/u3/germaneau/intel/tbb/2.0/ia32/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3 -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../../../i486-slackware-linux/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../.. -lgfortranbegin -lgfortran -lm -lgcc_s
28 checking whether g77 accepts the FLIBS found by autoconf... yes
29 checking whether C can link with  -L/home/u3/germaneau/intel/tbb/2.0/ia32/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3 -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../../../i486-slackware-linux/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../.. -lgfortranbegin -lgfortran -lm -lgcc_s... yes
30 checking for linker for Fortran main programs... Use Fortran to link programs
31 checking for Fortran 77 name mangling... lower underscore
32 checking what libraries are needed to link Fortran programs with C routines that use stdio... none
33 checking for f90... no
34 checking for xlf90... no
35 checking for pgf90... no
36 checking for ifort... ifort
37 checking that f works as the extension for Fortran 90 program... yes
38 checking whether we are using the GNU Fortran 90 compiler... no
39 checking whether ifort accepts -g... yes
40 checking for extension for Fortran 90 programs... f90
41 checking whether the Fortran 90 compiler (ifort  ) works... yes
42 checking whether the Fortran 90 compiler (ifort  ) is a cross-compiler... no
43 checking whether Fortran 90 works with Fortran 77... yes
44 checking whether Fortran accepts ! for comments... yes
45 checking for include directory flag for Fortran... -I
46 checking for Fortran 77 flag for library directories... -L
47 checking for which Fortran libraries are needed to link C with Fortran... none
48 checking whether g77 allows -shared -fpic... yes
49 checking whether Fortran compiler processes .F files with C preprocessor... yes
50 checking that f works as the extension for Fortran 90 program... yes
51 checking whether we are using the GNU Fortran 90 compiler... (cached) no
52 checking whether ifort accepts -g... (cached) yes
53 checking for extension for Fortran 90 programs... f90
54 checking whether the Fortran 90 compiler (ifort  ) works... yes
55 checking whether the Fortran 90 compiler (ifort  ) is a cross-compiler... no
56 checking for Fortran 90 module extension... mod
57 checking for Fortran 90 module include flag... -I
58 checking whether Fortran 90 accepts f90 suffix... yes
59 checking whether Fortran 90 compiler accepts option -O2... yes
60 checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
61 checking whether Fortran 90 compiler processes .F90 files with C preprocessor... yes
62 checking what libraries are needed to link Fortran90 programs with C routines that use stdio... none
63 checking for f90 compiler vendor... intel
64 checking for c++... c++
65 checking whether we are using the GNU C++ compiler... yes
66 checking whether c++ accepts -g... yes
67 checking whether the C++ compiler c++ can build an executable... yes
68 checking whether the compiler supports exceptions... yes
69 checking whether the compiler recognizes bool as a built-in type... yes
70 checking whether the compiler implements namespaces... yes
71 checking whether <iostream> available... yes
72 checking whether the compiler implements the namespace std... yes
73 checking whether <math> available... no
74 checking for GNU g++ version... 4 . 2
75 checking whether C++ compiler accepts option -O2... yes
76 checking whether routines compiled with -O2 can be linked with ones compiled without -O2... yes
77 checking for perl... /usr/bin/perl
78 checking for ar... ar
79 checking for ranlib... ranlib
80 checking for etags... etags
81 checking for etags argument to specify language... --language=c
82 checking for killall... killall
83 checking for a BSD-compatible install... /bin/ginstall -c
84 checking whether install works... yes
85 checking whether install breaks libraries... no
86 checking whether mkdir -p works... yes
87 checking for make... make
88 checking whether clock skew breaks make... no
89 checking whether make supports include... yes
90 checking whether make allows comments in actions... yes
91 checking for virtual path format... VPATH
92 checking whether make sets CFLAGS... no
93 checking for bash... /bin/sh
94 checking whether /bin/sh supports arrays... yes
95 checking how to run the C preprocessor... gcc -E
96 checking for dlfcn.h... yes
97 checking for library containing dlopen... -ldl
98 checking for dlopen... yes
99 checking for dlsym... yes
100 Creating shared libraries using GNU
101 checking for doctext... false
102 checking for location of doctext style files... unavailable
103 checking for an ANSI C-conforming const... yes
104 checking for volatile... yes
105 checking for restrict... __restrict
106 checking for inline... inline
107 checking whether __attribute__ allowed... yes
108 checking whether __attribute__((format)) allowed... yes
109 checking whether byte ordering is bigendian... no
110 checking whether C compiler allows unaligned doubles... yes
111 checking whether gcc supports __func__... yes
112 Using gcc to determine dependencies
113 checking whether long double is supported... yes
114 checking whether long long is supported... yes
115 checking for max C struct integer alignment... four
116 checking for max C struct floating point alignment... four
117 checking for max C struct alignment of structs with doubles... four
118 checking for max C struct floating point alignment with long doubles... four
119 checking if alignment of structs with doubles is based on position... no
120 checking if alignment of structs with long long ints is based on position... no
121 checking if double alignment breaks rules, find actual alignment... no
122 checking for alignment restrictions on pointers... int or better
123 checking for egrep... grep -E
124 checking for ANSI C header files... yes
125 checking for sys/types.h... yes
126 checking for sys/stat.h... yes
127 checking for stdlib.h... yes
128 checking for string.h... yes
129 checking for memory.h... yes
130 checking for strings.h... yes
131 checking for inttypes.h... yes
132 checking for stdint.h... yes
133 checking for unistd.h... yes
134 checking for char... yes
135 checking size of char... 1
136 checking for short... yes
137 checking size of short... 2
138 checking for int... yes
139 checking size of int... 4
140 checking for long... yes
141 checking size of long... 4
142 checking for long long... yes
143 checking size of long long... 8
144 checking for float... yes
145 checking size of float... 4
146 checking for double... yes
147 checking size of double... 8
148 checking for long double... yes
149 checking size of long double... 12
150 checking for wchar_t... yes
151 checking size of wchar_t... 4
152 checking for void *... yes
153 checking size of void *... 4
154 checking for size of float int... 8
155 checking for size of double int... 12
156 checking for size of long int... 8
157 checking for size of short int... 6
158 checking for size of 2 int... 8
159 checking for size of long double int... 16
160 checking for sys/bitypes.h... yes
161 checking for int16_t... yes
162 checking for int32_t... yes
163 checking for int64_t... yes
164 checking for size of Fortran type integer... 4
165 checking for size of Fortran type real... 4
166 checking for size of Fortran type double precision... 8
167 checking whether integer*1 is supported... yes
168 checking whether integer*2 is supported... yes
169 checking whether integer*4 is supported... yes
170 checking whether integer*8 is supported... yes
171 checking whether integer*16 is supported... no
172 checking whether real*4 is supported... yes
173 checking whether real*8 is supported... yes
174 checking whether real*16 is supported... no
175 checking for C type matching Fortran integer... int
176 checking for size of MPI_Status... 20
177 checking for values of Fortran logicals... True is 1 and False is 0
178 checking for Fortran 90 integer kind for 4-byte integers... 4
179 checking for Fortran 90 integer kind for 8-byte integers... 8
180 checking for bool... yes
181 checking size of bool... 1
182 checking how to run the C++ preprocessor... c++ -E
183 checking for complex... yes
184 checking for Complex... yes
185 checking size of Complex... 8
186 checking for DoubleComplex... yes
187 checking size of DoubleComplex... 16
188 checking for LongDoubleComplex... yes
189 checking size of LongDoubleComplex... 24
190 checking if char * pointers use byte addresses... yes
191 checking for alignment restrictions on int64_t... no
192 checking for alignment restrictions on int32_t... no
193 checking for size of MPI_BSEND_OVERHEAD... 59
194 checking for gcc __asm__ and pentium cmpxchgl instruction... yes
195 checking for gcc __asm__ and AMD x86_64 cmpxchgq instruction... no
196 checking for gcc __asm__ and IA64 xchg4 instruction... no
197 checking for ANSI C header files... (cached) yes
198 checking for stdlib.h... (cached) yes
199 checking for stdarg.h... yes
200 checking for sys/types.h... (cached) yes
201 checking for inttypes.h... (cached) yes
202 checking for limits.h... yes
203 checking for stddef.h... yes
204 checking for errno.h... yes
205 checking for sys/socket.h... yes
206 checking for sys/time.h... yes
207 checking for unistd.h... (cached) yes
208 checking for endian.h... yes
209 checking for assert.h... yes
210 checking for sys/uio.h... yes
211 checking for size_t... yes
212 checking for setitimer... yes
213 checking for alarm... yes
214 checking for vsnprintf... yes
215 checking for vsprintf... yes
216 checking whether vsnprintf needs a declaration... no
217 checking for strerror... yes
218 checking for snprintf... yes
219 checking whether snprintf needs a declaration... no
220 checking for va_copy... yes
221 checking for working alloca.h... yes
222 checking for alloca... yes
223 checking for strdup... yes
224 checking whether strdup needs a declaration... no
225 checking for clock_gettime... no
226 checking for clock_getres... no
227 checking for gethrtime... no
228 checking for gettimeofday... yes
229 sourcing /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/setup_device
230 RUNNING SETUP_DEVICE FOR THE CH3 DEVICE
231 sourcing /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/channels/sock/setup_channel
232 RUNNING SETUP_CHANNEL FOR THE SOCK CHANNEL
233 sourcing /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/common/sock/setup
234 RUNNING SETUP FOR THE SOCK INTERFACE
235 checking for pthread.h... yes
236 checking for pthread_yield... no
237 checking for library containing pthread_key_create... -lpthread
238 checking for pthread_cleanup_push... no
239 checking whether pthread_cleanup_push is available (may be a macro in pthread.h)... no
240 checking for sched_yield... yes
241 checking for yield... no
242 checking for usleep... yes
243 checking for sleep... yes
244 checking for select... yes
245 RUNNING CONFIGURE FOR CH3 DEVICE
246 checking for make... make
247 checking whether clock skew breaks make... no
248 checking whether make supports include... yes
249 checking whether make allows comments in actions... yes
250 checking for virtual path format... VPATH
251 checking whether make sets CFLAGS... yes
252 checking for gcc... gcc
253 checking for C compiler default output file name... a.out
254 checking whether the C compiler works... yes
255 checking whether we are cross compiling... no
256 checking for suffix of executables...
257 checking for suffix of object files... o
258 checking whether we are using the GNU C compiler... yes
259 checking whether gcc accepts -g... yes
260 checking for gcc option to accept ANSI C... none needed
261 checking how to run the C preprocessor... gcc -E
262 checking for assert.h... yes
263 checking for limits.h... yes
264 checking for string.h... yes
265 checking for sys/types.h... yes
266 checking for sys/uio.h... yes
267 checking for uuid/uuid.h... yes
268 checking for time.h... yes
269 checking for ctype.h... yes
270 checking for unistd.h... yes
271 checking for arpa/inet.h... yes
272 checking for sys/socket.h... yes
273 checking for net/if.h... yes
274 checking for egrep... grep -E
275 checking for ANSI C header files... yes
276 checking for sys/types.h... (cached) yes
277 checking for sys/stat.h... yes
278 checking for stdlib.h... yes
279 checking for string.h... (cached) yes
280 checking for memory.h... yes
281 checking for strings.h... yes
282 checking for inttypes.h... yes
283 checking for stdint.h... yes
284 checking for unistd.h... (cached) yes
285 checking for pid_t... yes
286 checking for inet_pton... yes
287 checking for gethostname... yes
288 checking whether gethostname needs a declaration... no
289 checking for CFUUIDCreate... no
290 checking for uuid_generate... no
291 checking for time... yes
292 checking for library containing uuid_generate... -luuid
293 checking whether CPP accepts variable length argument lists... yes
294 checking whether byte ordering is bigendian... no
295 checking whether we can use struct ifconf... yes
296 checking for int... yes
297 checking size of int... 4
298 checking for long... yes
299 checking size of long... 4
300 checking for long long... yes
301 checking size of long long... 8
302 checking for void *... yes
303 checking size of void *... 4
304 checking for etags... etags
305 configure: creating ./config.status
306 config.status: creating Makefile
307 config.status: creating src/Makefile
308 config.status: creating util/Makefile
309 config.status: creating util/shm/Makefile
310 config.status: creating util/shmbase/Makefile
311 config.status: creating channels/Makefile
312 config.status: creating localdefs
313 config.status: creating include/mpid_thread.h
314 config.status: creating include/mpidi_ch3_conf.h
315 config.status: include/mpidi_ch3_conf.h is unchanged
316 config.status: executing default-1 commands
317 copying /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/../common/thread/mpid_thread_mpe.c to src/mpid_thread.c
318 configure: configuring in util/sock
319 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/util/sock/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/util/sock
320 RUNNING CONFIGURE FOR CH3 UTIL SOCK ROUTINES
321 checking for make... make
322 checking whether clock skew breaks make... no
323 checking whether make supports include... yes
324 checking whether make allows comments in actions... yes
325 checking for virtual path format... VPATH
326 checking whether make sets CFLAGS... yes
327 checking for ar... ar
328 checking for ranlib... ranlib
329 checking for gcc... gcc
330 checking for C compiler default output file name... a.out
331 checking whether the C compiler works... yes
332 checking whether we are cross compiling... no
333 checking for suffix of executables...
334 checking for suffix of object files... o
335 checking whether we are using the GNU C compiler... yes
336 checking whether gcc accepts -g... yes
337 checking for gcc option to accept ANSI C... none needed
338 checking how to run the C preprocessor... gcc -E
339 checking for assert.h... yes
340 checking for limits.h... yes
341 checking for string.h... yes
342 checking for sys/types.h... yes
343 checking for sys/uio.h... yes
344 checking for time.h... yes
345 checking for ctype.h... yes
346 checking for unistd.h... yes
347 checking for arpa/inet.h... yes
348 checking for sys/socket.h... yes
349 checking for net/if.h... yes
350 checking for egrep... grep -E
351 checking for ANSI C header files... yes
352 checking for sys/types.h... (cached) yes
353 checking for sys/stat.h... yes
354 checking for stdlib.h... yes
355 checking for string.h... (cached) yes
356 checking for memory.h... yes
357 checking for strings.h... yes
358 checking for inttypes.h... yes
359 checking for stdint.h... yes
360 checking for unistd.h... (cached) yes
361 checking for pid_t... yes
362 checking for inet_pton... yes
363 checking for gethostname... yes
364 checking whether gethostname needs a declaration... no
365 checking whether CPP accepts variable length argument lists... yes
366 checking whether byte ordering is bigendian... no
367 checking whether we can use struct ifconf... yes
368 checking for int... yes
369 checking size of int... 4
370 checking for long... yes
371 checking size of long... 4
372 checking for long long... yes
373 checking size of long long... 8
374 checking for void *... yes
375 checking size of void *... 4
376 checking for etags... etags
377 configure: creating ./config.status
378 config.status: creating Makefile
379 config.status: creating ch3usockconf.h
380 config.status: ch3usockconf.h is unchanged
381 config.status: executing default-1 commands
382 Updating dependency directories .deps
383 configure: configuring in channels/sock
384 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/channels/sock/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/ch3/channels/sock
385 RUNNING CONFIGURE FOR THE SOCK CHANNEL
386 checking for a BSD-compatible install... /bin/ginstall -c
387 checking whether install works... yes
388 checking for ranlib... ranlib
389 checking for gcc... gcc
390 checking for C compiler default output file name... a.out
391 checking whether the C compiler works... yes
392 checking whether we are cross compiling... no
393 checking for suffix of executables...
394 checking for suffix of object files... o
395 checking whether we are using the GNU C compiler... yes
396 checking whether gcc accepts -g... yes
397 checking for gcc option to accept ANSI C... none needed
398 checking whether install breaks libraries... no
399 checking whether mkdir -p works... yes
400 checking for make... make
401 checking whether clock skew breaks make... no
402 checking whether make supports include... yes
403 checking whether make allows comments in actions... yes
404 checking for virtual path format... VPATH
405 checking whether make sets CFLAGS... yes
406 checking for ar... ar
407 checking for ranlib... ranlib
408 checking for net/if.h... yes
409 checking how to run the C preprocessor... gcc -E
410 checking for netdb.h... yes
411 checking for sys/ioctl.h... yes
412 checking for sys/socket.h... yes
413 checking for sys/sockio.h... no
414 checking for sys/types.h... yes
415 checking for errno.h... yes
416 checking for netinet/in.h... yes
417 configure: creating ./config.status
418 config.status: creating Makefile
419 config.status: creating src/Makefile
420 config.status: creating localdefs
421 config.status: creating include/mpidi_ch3i_sock_conf.h
422 config.status: include/mpidi_ch3i_sock_conf.h is unchanged
423 config.status: executing default-1 commands
424 Updating dependency directories .deps
425 RUNNING CONFIGURE FOR THE SOCK INTERFACE
426 checking for gcc... gcc
427 checking for C compiler default output file name... a.out
428 checking whether the C compiler works... yes
429 checking whether we are cross compiling... no
430 checking for suffix of executables...
431 checking for suffix of object files... o
432 checking whether we are using the GNU C compiler... yes
433 checking whether gcc accepts -g... yes
434 checking for gcc option to accept ANSI C... none needed
435 checking for strerror... yes
436 checking for make... make
437 checking whether clock skew breaks make... no
438 checking whether make supports include... yes
439 checking whether make allows comments in actions... yes
440 checking for virtual path format... VPATH
441 checking whether make sets CFLAGS... yes
442 checking for ar... ar
443 checking for ranlib... ranlib
444 configure: creating ./config.status
445 config.status: creating Makefile
446 config.status: creating localdefs
447 config.status: creating mpidu_sock_conf.h
448 config.status: mpidu_sock_conf.h is unchanged
449 configure: configuring in poll
450 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/common/sock/poll/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpid/common/sock/poll
451 RUNNING CONFIGURE FOR THE POLL IMPLEMENTATION OF SOCK
452 checking for make... make
453 checking whether clock skew breaks make... no
454 checking whether make supports include... yes
455 checking whether make allows comments in actions... yes
456 checking for virtual path format... VPATH
457 checking whether make sets CFLAGS... yes
458 checking for gcc... gcc
459 checking for C compiler default output file name... a.out
460 checking whether the C compiler works... yes
461 checking whether we are cross compiling... no
462 checking for suffix of executables...
463 checking for suffix of object files... o
464 checking whether we are using the GNU C compiler... yes
465 checking whether gcc accepts -g... yes
466 checking for gcc option to accept ANSI C... none needed
467 checking for inline... inline
468 checking for poll... yes
469 checking how to run the C preprocessor... gcc -E
470 checking for assert.h... yes
471 checking for errno.h... yes
472 checking for fcntl.h... yes
473 checking for limits.h... yes
474 checking for netdb.h... yes
475 checking for netinet/in.h... yes
476 checking for netinet/tcp.h... yes
477 checking for poll.h... yes
478 checking for stdlib.h... yes
479 checking for sys/param.h... yes
480 checking for sys/poll.h... yes
481 checking for sys/types.h... yes
482 checking for sys/uio.h... yes
483 checking for unistd.h... yes
484 checking if struct poll is defined... yes
485 checking if a simple program using poll() can be compiled... yes
486 checking whether bit fields work in ip.h... yes
487 checking for gethostname... yes
488 checking whether gethostname needs a declaration... no
489 checking for library containing socket... none required
490 checking for library containing gethostbyname... none required
491 checking whether socklen_t is defined (in sys/socket.h if present)... yes
492 checking for etags... etags
493 configure: creating ./config.status
494 config.status: creating Makefile
495 config.status: creating localdefs
496 config.status: creating mpidu_socki_conf.h
497 config.status: mpidu_socki_conf.h is unchanged
498 config.status: executing default-1 commands
499 Updating dependency directories .deps
500 Configuring with args --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/ --enable-sharedlibs=gcc --enable-dynamiclibs
501 checking for architecture... LINUX
502 ROMIO home directory is /home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpi/romio
503 checking for gcc... gcc
504 checking for C compiler default output file name... a.out
505 checking whether the C compiler works... yes
506 checking whether we are cross compiling... no
507 checking for suffix of executables...
508 checking for suffix of object files... o
509 checking whether we are using the GNU C compiler... yes
510 checking whether gcc accepts -g... yes
511 checking for gcc option to accept ANSI C... none needed
512 checking whether we are using the GNU Fortran 77 compiler... yes
513 checking whether g77 accepts -g... yes
514 checking how to run the C preprocessor... gcc -E
515 checking for memalign... yes
516 checking Fortran external names
517 Fortran externals have a trailing underscore and are lowercase
518 checking for inline... inline
519 checking how to run the C preprocessor... gcc -E
520 checking for egrep... grep -E
521 checking for ANSI C header files... yes
522 checking for sys/types.h... yes
523 checking for sys/stat.h... yes
524 checking for stdlib.h... yes
525 checking for string.h... yes
526 checking for memory.h... yes
527 checking for strings.h... yes
528 checking for inttypes.h... yes
529 checking for stdint.h... yes
530 checking for unistd.h... yes
531 checking for unistd.h... (cached) yes
532 checking fcntl.h usability... yes
533 checking fcntl.h presence... yes
534 checking for fcntl.h... yes
535 checking malloc.h usability... yes
536 checking malloc.h presence... yes
537 checking for malloc.h... yes
538 checking stddef.h usability... yes
539 checking stddef.h presence... yes
540 checking for stddef.h... yes
541 checking for int... yes
542 checking size of int... 4
543 checking for void *... yes
544 checking size of void *... 4
545 checking for int large enough for pointers... yes
546 checking for long long... yes
547 checking size of long long... 8
548 checking for extension for Fortran 90 programs... f90
549 checking for Fortran 90 KIND parameter for 8-byte integers...            8
550 checking that we can use integer*8 to declare MPI_DISPLACMENT_CURRENT... yes
551 Overriding Array test for MPICH2
552 checking for weak symbol support... pragma weak
553 checking that weak symbols are visible to other files... yes
554 checking that the compiler correctly implements weak symbols... yes
555 checking whether struct flock compatible with MPI_Offset... yes
556 checking for pvfs2-config... notfound
557 checking configured file systems... testfs ufs nfs
558 configure: WARNING: File locks may not work with NFS.  See the Installation and
559 users manual for instructions on testing and if necessary fixing this
560 checking for library containing aio_write... -lrt
561 checking signal.h usability... yes
562 checking signal.h presence... yes
563 checking for signal.h... yes
564 checking if aio.h exists and can be compiled... yes
565 checking if sys/aio.h exists and can be compiled... no
566 checking whether aio routines can be used... yes
567 checking for obsolete two-argument aio_write... no
568 checking for obsolete two-argument aio_suspend... no
569 checking for aio_fildes member of aiocb structure... yes
570 checking for aio_whence member of aiocb structure... no
571 checking for aio_handle member of aiocb structure... no
572 checking for aio_reqprio member of aiocb structure... yes
573 checking for aio_sigevent member of aiocb structure... yes
574 checking sys/vfs.h usability... yes
575 checking sys/vfs.h presence... yes
576 checking for sys/vfs.h... yes
577 checking sys/param.h usability... yes
578 checking sys/param.h presence... yes
579 checking for sys/param.h... yes
580 checking sys/mount.h usability... yes
581 checking sys/mount.h presence... yes
582 checking for sys/mount.h... yes
583 checking sys/statvfs.h usability... yes
584 checking sys/statvfs.h presence... yes
585 checking for sys/statvfs.h... yes
586 checking whether struct statfs properly defined... yes
587 checking for f_fstypename member of statfs structure... no
588 checking for sys/stat.h... (cached) yes
589 checking for sys/types.h... (cached) yes
590 checking for unistd.h... (cached) yes
591 checking for stat... yes
592 checking for st_fstype member of stat structure... no
593 checking for sys/types.h... (cached) yes
594 checking for sys/statvfs.h... (cached) yes
595 checking for sys/vfs.h... (cached) yes
596 checking for statvfs... yes
597 checking for f_basetype member of statvfs structure... no
598 checking for unistd.h... (cached) yes
599 checking for large file defines... yes
600 checking whether off64_t is an scalar type... yes
601 checking for strerror... yes
602 checking for doctext... false
603 checking for strdup... yes
604 checking whether strdup needs a declaration... no
605 checking for snprintf... yes
606 checking whether snprintf needs a declaration... no
607 checking for lstat... yes
608 checking whether lstat needs a declaration... yes
609 checking for readlink... yes
610 checking whether readlink needs a declaration... no
611 checking for fsync... yes
612 checking whether fsync needs a declaration... no
613 checking for ftruncate... yes
614 checking whether ftruncate needs a declaration... no
615 checking for unistd.h... (cached) yes
616 checking for large file defines... yes
617 setting SYSDEP_INC to
618 checking for restrict... __restrict
619 checking whether __attribute__ allowed... yes
620 checking whether __attribute__((format)) allowed... yes
621 setting CC to gcc
622 setting F77 to g77
623 setting TEST_CC to /home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc
624 setting TEST_F77 to /home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77
625 setting CFLAGS to  -O2  -DFORTRANUNDERSCORE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -DHAVE_ROMIOCONF_H -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64
626 setting USER_CFLAGS to
627 setting USER_FFLAGS to
628 configure: creating ./config.status
629 config.status: creating Makefile
630 config.status: creating localdefs
631 config.status: creating mpi-io/Makefile
632 config.status: creating mpi2-other/info/Makefile
633 config.status: creating mpi2-other/array/Makefile
634 config.status: creating adio/common/Makefile
635 config.status: creating test/Makefile
636 config.status: creating test/misc.c
637 config.status: creating test/large_file.c
638 config.status: creating test/runtests
639 config.status: creating util/romioinstall
640 config.status: creating include/mpio.h
641 config.status: creating include/mpiof.h
642 config.status: creating adio/ad_nfs/Makefile
643 config.status: creating adio/ad_ufs/Makefile
644 config.status: creating adio/ad_bgl/Makefile
645 config.status: creating adio/ad_bglockless/Makefile
646 config.status: creating adio/ad_panfs/Makefile
647 config.status: creating adio/ad_xfs/Makefile
648 config.status: creating adio/ad_sfs/Makefile
649 config.status: creating adio/ad_pfs/Makefile
650 config.status: creating adio/ad_testfs/Makefile
651 config.status: creating adio/ad_pvfs/Makefile
652 config.status: creating adio/ad_pvfs2/Makefile
653 config.status: creating adio/ad_gridftp/Makefile
654 config.status: creating adio/ad_lustre/Makefile
655 config.status: creating mpi-io/fortran/Makefile
656 config.status: creating mpi2-other/info/fortran/Makefile
657 config.status: creating mpi2-other/array/fortran/Makefile
658 config.status: creating test/fmisc.f
659 config.status: creating test/fcoll_test.f
660 config.status: creating test/pfcoll_test.f
661 config.status: creating test/fperf.f
662 config.status: creating mpi-io/glue/mpich2/Makefile
663 config.status: creating mpi-io/glue/mpich1/Makefile
664 config.status: creating mpi-io/glue/default/Makefile
665 config.status: creating common/dataloop/Makefile
666 config.status: creating adio/include/romioconf.h
667 config.status: executing default-1 commands
668 RUNNING CONFIGURE FOR THE SIMPLE PMI
669 checking for make... make
670 checking whether clock skew breaks make... no
671 checking whether make supports include... yes
672 checking whether make allows comments in actions... yes
673 checking for virtual path format... VPATH
674 checking whether make sets CFLAGS... yes
675 checking for gcc... gcc
676 checking for C compiler default output file name... a.out
677 checking whether the C compiler works... yes
678 checking whether we are cross compiling... no
679 checking for suffix of executables...
680 checking for suffix of object files... o
681 checking whether we are using the GNU C compiler... yes
682 checking whether gcc accepts -g... yes
683 checking for gcc option to accept ANSI C... none needed
684 checking how to run the C preprocessor... gcc -E
685 checking for unistd.h... yes
686 checking for string.h... yes
687 checking for stdlib.h... yes
688 checking for sys/socket.h... yes
689 checking for strings.h... yes
690 checking for snprintf... yes
691 checking whether snprintf needs a declaration... no
692 checking for sys/types.h... yes
693 checking for sys/param.h... yes
694 checking for sys/socket.h... (cached) yes
695 checking for netinet/in.h... yes
696 checking for netinet/tcp.h... yes
697 checking for sys/un.h... yes
698 checking for netdb.h... yes
699 checking for library containing socket... none required
700 checking for library containing gethostbyname... none required
701 checking for socket... yes
702 checking for setsockopt... yes
703 checking for gethostbyname... yes
704 checking whether socklen_t is defined (in sys/socket.h if present)... yes
705 checking whether struct hostent contains h_addr_list... yes
706 configure: creating ./config.status
707 config.status: creating Makefile
708 config.status: creating localdefs
709 config.status: creating pmiconf.h
710 config.status: pmiconf.h is unchanged
711 Configuring with args --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/ --enable-sharedlibs=gcc --enable-dynamiclibs
712 checking for gcc... gcc
713 checking for C compiler default output file name... a.out
714 checking whether the C compiler works... yes
715 checking whether we are cross compiling... no
716 checking for suffix of executables...
717 checking for suffix of object files... o
718 checking whether we are using the GNU C compiler... yes
719 checking whether gcc accepts -g... yes
720 checking for gcc option to accept ANSI C... none needed
721 checking whether make sets $(MAKE)... yes
722 checking whether ln -s works... yes
723 checking for a BSD-compatible install... /bin/ginstall -c
724 checking whether install /bin/ginstall -c works... yes
725 Using INSTALL=/bin/ginstall -c
726 checking for totalview... no
727 checking for python2.5... python2.5
728 checking for python2.4... no
729 checking for python2.3... no
730 checking for python2.2... no
731 checking for python2... no
732 checking for python... python
733 checking that python2.5 is a valid python version... yes
734 checking that the cPickle module is available for python2.5... yes
735 checking for library containing socket... none required
736 checking how to run the C preprocessor... gcc -E
737 checking for egrep... grep -E
738 checking for ANSI C header files... yes
739 checking for sys/wait.h that is POSIX.1 compatible... yes
740 checking for sys/types.h... yes
741 checking for sys/stat.h... yes
742 checking for stdlib.h... yes
743 checking for string.h... yes
744 checking for memory.h... yes
745 checking for strings.h... yes
746 checking for inttypes.h... yes
747 checking for stdint.h... yes
748 checking for unistd.h... yes
749 checking fcntl.h usability... yes
750 checking fcntl.h presence... yes
751 checking for fcntl.h... yes
752 checking for strings.h... (cached) yes
753 checking sys/time.h usability... yes
754 checking sys/time.h presence... yes
755 checking for sys/time.h... yes
756 checking for unistd.h... (cached) yes
757 checking for stdlib.h... (cached) yes
758 checking sys/param.h usability... yes
759 checking sys/param.h presence... yes
760 checking for sys/param.h... yes
761 checking for putenv... yes
762 checking for socket... yes
763 checking for snprintf... yes
764 checking whether snprintf needs a declaration... no
765 configure: creating ./config.status
766 config.status: creating Makefile
767 config.status: creating mpdconf.h
768 Configuring MPE Profiling System with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77'
769 checking gnumake... yes using --no-print-directory
770 checking BSD 4.4 make... no - whew
771 checking OSF V3 make... no
772 checking for virtual path format... VPATH
773 This MPE build is part of the MPICH2 build
774 checking for gcc... gcc
775 checking for C compiler default output file name... a.out
776 checking whether the C compiler works... yes
777 checking whether we are cross compiling... no
778 checking for suffix of executables...
779 checking for suffix of object files... o
780 checking whether we are using the GNU C compiler... yes
781 checking whether gcc accepts -g... yes
782 checking for gcc option to accept ANSI C... none needed
783 checking whether MPI_CC has been set ... /home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc
784 checking whether we are using the GNU Fortran 77 compiler... yes
785 checking whether g77 accepts -g... yes
786 checking whether MPI_F77 has been set ... /home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77
787 checking how to get verbose linking output from g77... -v
788 checking for Fortran libraries of g77...  -L/home/u3/germaneau/intel/tbb/2.0/ia32/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3 -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../../../i486-slackware-linux/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../.. -lpthread -ldl -lrt -lgfortranbegin -lgfortran -lm -lgcc_s
789 checking whether g77 accepts the FLIBS found by autoconf... yes
790 checking whether C can link with  -L/home/u3/germaneau/intel/tbb/2.0/ia32/cc4.1.0_libc2.4_kernel2.6.16.21/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3 -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../../../i486-slackware-linux/lib -L/usr/lib/gcc/i486-slackware-linux/4.2.3/../../.. -lpthread -ldl -lrt -lgfortranbegin -lgfortran -lm -lgcc_s... yes
791 checking for linker for Fortran main programs... Use Fortran to link programs
792 checking for Fortran 77 name mangling... lower underscore
793 checking what libraries are needed to link Fortran programs with C routines that use stdio... none
794 checking for Fortran 77 flag for library directories... -L
795 checking for include directory flag for Fortran... -I
796 checking how to run the C preprocessor... gcc -E
797 checking whether ln -s works... yes
798 checking for a BSD-compatible install... /bin/ginstall -c
799 checking whether install works... yes
800 checking for ranlib... ranlib
801 checking whether install breaks libraries... no
802 checking for leftover Makefiles in subpackages ... none
803 configure: creating ./config.status
804 config.status: creating Makefile
805 config.status: creating sbin/mpetestlink
806 config.status: creating sbin/mpetestexec
807 config.status: creating sbin/mpetestexeclog
808 config.status: creating sbin/mpeinstall
809 config.status: creating sbin/mpecheckinstall
810 config.status: creating sbin/mpecheckbuild
811 config.status: creating etc/mpe_help.conf
812 config.status: creating etc/mpe_f77env.conf
813 config.status: creating mpe_conf.h
814 config.status: executing default-1 commands
815 configure: configuring in src/misc
816 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/misc/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/misc
817 Configuring MPE Miscellaneous Library with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/misc'
818 checking gnumake... yes using --no-print-directory
819 checking BSD 4.4 make... no - whew
820 checking OSF V3 make... no
821 checking for virtual path format... VPATH
822 checking build system type... i686-pc-linux-gnu
823 checking host system type... i686-pc-linux-gnu
824 checking for gcc... gcc
825 checking for C compiler default output file name... a.out
826 checking whether the C compiler works... yes
827 checking whether we are cross compiling... no
828 checking for suffix of executables...
829 checking for suffix of object files... o
830 checking whether we are using the GNU C compiler... yes
831 checking whether gcc accepts -g... yes
832 checking for gcc option to accept ANSI C... none needed
833 checking for ar... ar
834 checking for ranlib... ranlib
835 checking how to run the C preprocessor... gcc -E
836 checking for dbx... no
837 checking for gdb... /usr/bin/gdb
838 checking for egrep... grep -E
839 checking for ANSI C header files... yes
840 checking for an ANSI C-conforming const... yes
841 checking for sysinfo... yes
842 checking for uname... yes
843 checking for gethostbyname... yes
844 checking for sys/types.h... yes
845 checking for sys/stat.h... yes
846 checking for stdlib.h... yes
847 checking for string.h... yes
848 checking for memory.h... yes
849 checking for strings.h... yes
850 checking for inttypes.h... yes
851 checking for stdint.h... yes
852 checking for unistd.h... yes
853 checking for unistd.h... (cached) yes
854 checking for stdlib.h... (cached) yes
855 checking for string.h... (cached) yes
856 checking netdb.h usability... yes
857 checking netdb.h presence... yes
858 checking for netdb.h... yes
859 checking sys/systeminfo.h usability... no
860 checking sys/systeminfo.h presence... no
861 checking for sys/systeminfo.h... no
862 checking for sys/types.h... (cached) yes
863 checking for sighandler_t... no
864 checking for kill... yes
865 checking whether kill needs a declaration... no
866 configure: creating ./config.status
867 config.status: creating Makefile
868 config.status: creating src/Makefile
869 config.status: creating src/dbxerr.c
870 config.status: creating mpe_misc_conf.h
871 configure: configuring in src/callstack
872 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/callstack/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/callstack
873 Configuring MPE CallStack Library with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/callstack'
874 checking gnumake... yes using --no-print-directory
875 checking BSD 4.4 make... no - whew
876 checking OSF V3 make... no
877 checking for virtual path format... VPATH
878 checking for gcc... gcc
879 checking for C compiler default output file name... a.out
880 checking whether the C compiler works... yes
881 checking whether we are cross compiling... no
882 checking for suffix of executables...
883 checking for suffix of object files... o
884 checking whether we are using the GNU C compiler... yes
885 checking whether gcc accepts -g... yes
886 checking for gcc option to accept ANSI C... none needed
887 checking for ar... ar
888 checking for ranlib... ranlib
889 checking how to run the C preprocessor... gcc -E
890 checking for egrep... grep -E
891 checking for ANSI C header files... yes
892 checking for an ANSI C-conforming const... yes
893 checking for inline... inline
894 checking for sys/types.h... yes
895 checking for sys/stat.h... yes
896 checking for stdlib.h... yes
897 checking for string.h... yes
898 checking for memory.h... yes
899 checking for strings.h... yes
900 checking for inttypes.h... yes
901 checking for stdint.h... yes
902 checking for unistd.h... yes
903 checking stdio.h usability... yes
904 checking stdio.h presence... yes
905 checking for stdio.h... yes
906 checking for string.h... (cached) yes
907 checking for unistd.h... (cached) yes
908 checking fcntl.h usability... yes
909 checking fcntl.h presence... yes
910 checking for fcntl.h... yes
911 checking execinfo.h usability... yes
912 checking execinfo.h presence... yes
913 checking for execinfo.h... yes
914 checking whether <execinfo.h> defines backtrace_symbols_fd() ... yes
915 checking if <execinfo.h> links with -Wl,--export-dynamic ... yes
916 checking for fdopen... yes
917 checking whether fdopen needs a declaration... no
918 configure: creating ./config.status
919 config.status: creating Makefile
920 config.status: creating src/Makefile
921 config.status: creating include/mpe_callstack.h
922 config.status: creating etc/mpe_callstack_ldflags.conf
923 config.status: creating mpe_callstack_conf.h
924 configure: configuring in src/logging
925 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/logging/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/logging
926 Configuring MPE Logging Library and Tools with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/logging'
927 checking gnumake... yes using --no-print-directory
928 checking BSD 4.4 make... no - whew
929 checking OSF V3 make... no
930 checking for virtual path format... VPATH
931 checking for gcc... gcc
932 checking for C compiler default output file name... a.out
933 checking whether the C compiler works... yes
934 checking whether we are cross compiling... no
935 checking for suffix of executables...
936 checking for suffix of object files... o
937 checking whether we are using the GNU C compiler... yes
938 checking whether gcc accepts -g... yes
939 checking for gcc option to accept ANSI C... none needed
940 checking for ar... ar
941 checking for ranlib... ranlib
942 checking how to run the C preprocessor... gcc -E
943 checking for egrep... grep -E
944 checking for ANSI C header files... yes
945 checking for an ANSI C-conforming const... yes
946 checking whether byte ordering is bigendian... no
947 checking for sys/types.h... yes
948 checking for sys/stat.h... yes
949 checking for stdlib.h... yes
950 checking for string.h... yes
951 checking for memory.h... yes
952 checking for strings.h... yes
953 checking for inttypes.h... yes
954 checking for stdint.h... yes
955 checking for unistd.h... yes
956 checking stdio.h usability... yes
957 checking stdio.h presence... yes
958 checking for stdio.h... yes
959 checking for stdlib.h... (cached) yes
960 checking for string.h... (cached) yes
961 checking for unistd.h... (cached) yes
962 checking sys/time.h usability... yes
963 checking sys/time.h presence... yes
964 checking for sys/time.h... yes
965 checking for sys/types.h... (cached) yes
966 checking sys/bitypes.h usability... yes
967 checking sys/bitypes.h presence... yes
968 checking for sys/bitypes.h... yes
969 checking for sys/stat.h... (cached) yes
970 checking fcntl.h usability... yes
971 checking fcntl.h presence... yes
972 checking for fcntl.h... yes
973 checking for header that defines C99 integer types, intXX_t ... <stdint.h>
974 checking for inttypes.h... (cached) yes
975 checking whether <inttypes.h> defines the PRIdXX macros ... yes
976 checking if <stdint.h> can be behind system headers ... yes
977 checking for void *... yes
978 checking size of void *... 4
979 checking for address-sized integer ... CLOG_int32_t
980 checking build system type... i686-pc-linux-gnu
981 checking host system type... i686-pc-linux-gnu
982 checking for gethostname... yes
983 checking whether gethostname needs a declaration... no
984 checking for snprintf... yes
985 checking whether snprintf needs a declaration... no
986 checking for mkstemp... yes
987 checking whether mkstemp needs a declaration... no
988 checking for srand48... yes
989 checking whether srand48 needs a declaration... no
990 checking for lrand48... yes
991 checking whether lrand48 needs a declaration... no
992 checking for special C compiler options needed for large files... no
993 checking for _FILE_OFFSET_BITS value needed for large files... 64
994 checking for _LARGE_FILES value needed for large files... no
995 checking for O_LARGEFILE for open() ... needs _LARGEFILE64_SOURCE
996 checking for O_BINARY for open() ... no
997 checking pthread.h usability... yes
998 checking pthread.h presence... yes
999 checking for pthread.h... yes
1000 checking for pthread_mutex_lock in -lpthread... yes
1001 configure: creating ./config.status
1002 config.status: creating Makefile
1003 config.status: creating src/Makefile
1004 config.status: creating include/clog_inttypes.h
1005 config.status: creating include/mpi_null.h
1006 config.status: creating include/mpe_log_thread.h
1007 config.status: creating etc/mpe_log.conf
1008 config.status: creating etc/mpe_nolog.conf
1009 config.status: creating etc/mpe_log_postlib.conf
1010 config.status: creating mpe_logging_conf.h
1011 configure: configuring in src/wrappers
1012 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/wrappers/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/wrappers
1013 Configuring MPE Wrapper Libraries For MPI with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/wrappers'
1014 checking gnumake... yes using --no-print-directory
1015 checking BSD 4.4 make... no - whew
1016 checking OSF V3 make... no
1017 checking for virtual path format... VPATH
1018 checking for gcc... gcc
1019 checking for C compiler default output file name... a.out
1020 checking whether the C compiler works... yes
1021 checking whether we are cross compiling... no
1022 checking for suffix of executables...
1023 checking for suffix of object files... o
1024 checking whether we are using the GNU C compiler... yes
1025 checking whether gcc accepts -g... yes
1026 checking for gcc option to accept ANSI C... none needed
1027 checking for ar... ar
1028 checking for ranlib... ranlib
1029 checking how to run the C preprocessor... gcc -E
1030 checking for egrep... grep -E
1031 checking for ANSI C header files... yes
1032 checking for an ANSI C-conforming const... yes
1033 checking for sys/types.h... yes
1034 checking for sys/stat.h... yes
1035 checking for stdlib.h... yes
1036 checking for string.h... yes
1037 checking for memory.h... yes
1038 checking for strings.h... yes
1039 checking for inttypes.h... yes
1040 checking for stdint.h... yes
1041 checking for unistd.h... yes
1042 checking stdio.h usability... yes
1043 checking stdio.h presence... yes
1044 checking for stdio.h... yes
1045 checking for stdlib.h... (cached) yes
1046 checking for string.h... (cached) yes
1047 checking stdarg.h usability... yes
1048 checking stdarg.h presence... yes
1049 checking for stdarg.h... yes
1050 checking for working alloca.h... yes
1051 checking for alloca... yes
1052 checking for stdarg is correct... yes
1053 checking if compiler accepts prototypes ... yes
1054 checking build system type... i686-pc-linux-gnu
1055 checking host system type... i686-pc-linux-gnu
1056 checking for safe PMPI invocations ... no
1057 checking for the value of MPI_STATUS_SIZE ... 5
1058 configure: creating ./config.status
1059 config.status: creating Makefile
1060 config.status: creating src/Makefile
1061 config.status: creating test/Makefile
1062 config.status: creating etc/mpe_f77env.conf
1063 config.status: creating etc/mpe_mpilog.conf
1064 config.status: creating etc/mpe_mpitrace.conf
1065 config.status: creating mpe_wrappers_conf.h
1066 configure: configuring in src/graphics
1067 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/graphics/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/graphics
1068 Configuring MPE X Graphics Library with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/graphics'
1069 checking gnumake... yes using --no-print-directory
1070 checking BSD 4.4 make... no - whew
1071 checking OSF V3 make... no
1072 checking for virtual path format... VPATH
1073 checking for gcc... gcc
1074 checking for C compiler default output file name... a.out
1075 checking whether the C compiler works... yes
1076 checking whether we are cross compiling... no
1077 checking for suffix of executables...
1078 checking for suffix of object files... o
1079 checking whether we are using the GNU C compiler... yes
1080 checking whether gcc accepts -g... yes
1081 checking for gcc option to accept ANSI C... none needed
1082 checking for ar... ar
1083 checking for ranlib... ranlib
1084 checking how to run the C preprocessor... gcc -E
1085 checking for X... libraries , headers in standard search path
1086 checking for egrep... grep -E
1087 checking for ANSI C header files... yes
1088 checking for an ANSI C-conforming const... yes
1089 checking for sys/types.h... yes
1090 checking for sys/stat.h... yes
1091 checking for stdlib.h... yes
1092 checking for string.h... yes
1093 checking for memory.h... yes
1094 checking for strings.h... yes
1095 checking for inttypes.h... yes
1096 checking for stdint.h... yes
1097 checking for unistd.h... yes
1098 checking for void *... yes
1099 checking size of void *... 4
1100 checking for long pointer... no
1101 checking for system... yes
1102 checking for unistd.h... (cached) yes
1103 checking for stdlib.h... (cached) yes
1104 checking for string.h... (cached) yes
1105 configure: creating ./config.status
1106 config.status: creating Makefile
1107 config.status: creating src/Makefile
1108 config.status: creating contrib/life/Makefile
1109 config.status: creating contrib/mandel/Makefile
1110 config.status: creating contrib/mastermind/Makefile
1111 config.status: creating contrib/test/Makefile
1112 config.status: creating etc/mpe_mpianim.conf
1113 config.status: creating etc/mpe_graphics.conf
1114 config.status: creating mpe_graphics_conf.h
1115 configure: configuring in src/collchk
1116 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/collchk/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/collchk
1117 Configuring MPE Collective and Datatype Checking Library with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/collchk'
1118 checking gnumake... yes using --no-print-directory
1119 checking BSD 4.4 make... no - whew
1120 checking OSF V3 make... no
1121 checking for virtual path format... VPATH
1122 checking build system type... i686-pc-linux-gnu
1123 checking host system type... i686-pc-linux-gnu
1124 checking for gcc... gcc
1125 checking for C compiler default output file name... a.out
1126 checking whether the C compiler works... yes
1127 checking whether we are cross compiling... no
1128 checking for suffix of executables...
1129 checking for suffix of object files... o
1130 checking whether we are using the GNU C compiler... yes
1131 checking whether gcc accepts -g... yes
1132 checking for gcc option to accept ANSI C... none needed
1133 checking for ar... ar
1134 checking for ranlib... ranlib
1135 checking how to run the C preprocessor... gcc -E
1136 checking for egrep... grep -E
1137 checking for ANSI C header files... yes
1138 checking for an ANSI C-conforming const... yes
1139 checking for sys/types.h... yes
1140 checking for sys/stat.h... yes
1141 checking for stdlib.h... yes
1142 checking for string.h... yes
1143 checking for memory.h... yes
1144 checking for strings.h... yes
1145 checking for inttypes.h... yes
1146 checking for stdint.h... yes
1147 checking for unistd.h... yes
1148 checking stdio.h usability... yes
1149 checking stdio.h presence... yes
1150 checking for stdio.h... yes
1151 checking for stdlib.h... (cached) yes
1152 checking for string.h... (cached) yes
1153 checking for unistd.h... (cached) yes
1154 checking for working alloca.h... yes
1155 checking for alloca... yes
1156 configure: creating ./config.status
1157 config.status: creating Makefile
1158 config.status: creating src/Makefile
1159 config.status: creating test/Makefile
1160 config.status: creating etc/mpe_mpicheck.conf
1161 config.status: creating mpe_collchk_conf.h
1162 configure: configuring in src/slog2sdk
1163 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk
1164 Configuring SLOG2SDK with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk'
1165 checking gnumake... yes using --no-print-directory
1166 checking BSD 4.4 make... no - whew
1167 checking OSF V3 make... no
1168 checking for virtual path format... VPATH
1169 checking for a BSD-compatible install... /bin/ginstall -c
1170 checking whether install works... yes
1171 checking if CLASSPATH is set... no, good to go
1172 checking build system type... i686-pc-linux-gnu
1173 checking host system type... i686-pc-linux-gnu
1174 checking for java in user's PATH... found /usr/lib/java/bin//java
1175 checking if /usr/lib/java/bin//java works... yes
1176 checking if /usr/lib/java/bin//java runs simple jar file... yes
1177 checking if /usr/lib/java/bin//java runs simple Swing class... yes
1178 checking if /usr/lib/java/bin//java runs simple Swing jar file... yes
1179 checking for Java version... java full version "1.6.0_06-b02", i.e. Java 2 SDK
1180 checking for cygpath... no
1181 creating sample logfiles from source
1182 checking for leftover Makefiles in subpackages ... none
1183 configure: creating ./config.status
1184 config.status: creating Makefile
1185 config.status: creating sbin/install-package
1186 config.status: creating bin/slog2print
1187 config.status: creating bin/slog2navigator
1188 config.status: creating bin/slog2filter
1189 config.status: creating bin/slog2updater
1190 config.status: creating bin/logconvertor
1191 config.status: creating bin/jumpshot
1192 config.status: creating bin/clogprint
1193 config.status: creating bin/clogTOslog2
1194 config.status: creating bin/clog2print
1195 config.status: creating bin/clog2TOslog2
1196 configure: configuring in trace_rlog
1197 configure: running /bin/sh '/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk/trace_rlog/configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk' --cache-file=/dev/null --srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk/trace_rlog
1198 Configuring TRACE_RLOG implementation with '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' 'CC=gcc' 'CFLAGS= -O2' 'F77=g77' 'FFLAGS= -O2' 'MPI_CC=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpicc' 'MPI_F77=/home/u3/germaneau/soft/science/mpich2-1.0.7/bin/mpif77' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk' '--cache-file=/dev/null' '--srcdir=/home/u3/germaneau/soft/science/mpich2-1.0.7/src/mpe2/src/slog2sdk/trace_rlog' 'CXXFLAGS= -O2' 'CXX=c++'
1199 checking gnumake... yes using --no-print-directory
1200 checking BSD 4.4 make... no - whew
1201 checking OSF V3 make... no
1202 checking for virtual path format... VPATH
1203 checking for gcc... gcc
1204 checking for C compiler default output file name... a.out
1205 checking whether the C compiler works... yes
1206 checking whether we are cross compiling... no
1207 checking for suffix of executables...
1208 checking for suffix of object files... o
1209 checking whether we are using the GNU C compiler... yes
1210 checking whether gcc accepts -g... yes
1211 checking for gcc option to accept ANSI C... none needed
1212 checking how to run the C preprocessor... gcc -E
1213 checking for egrep... grep -E
1214 checking for ANSI C header files... yes
1215 checking for sys/types.h... yes
1216 checking for sys/stat.h... yes
1217 checking for stdlib.h... yes
1218 checking for string.h... yes
1219 checking for memory.h... yes
1220 checking for strings.h... yes
1221 checking for inttypes.h... yes
1222 checking for stdint.h... yes
1223 checking for unistd.h... yes
1224 checking for stdlib.h... (cached) yes
1225 checking stdio.h usability... yes
1226 checking stdio.h presence... yes
1227 checking for stdio.h... yes
1228 checking for string.h... (cached) yes
1229 checking ctype.h usability... yes
1230 checking ctype.h presence... yes
1231 checking for ctype.h... yes
1232 checking errno.h usability... yes
1233 checking errno.h presence... yes
1234 checking for errno.h... yes
1235 checking for an ANSI C-conforming const... yes
1236 checking for void *... yes
1237 checking size of void *... 4
1238 checking for int... yes
1239 checking size of int... 4
1240 checking for long... yes
1241 checking size of long... 4
1242 checking for long long... yes
1243 checking size of long long... 8
1244 checking for __int64... no
1245 checking size of __int64... 0
1246 checking whether byte ordering is bigendian... no
1247 checking build system type... i686-pc-linux-gnu
1248 checking host system type... i686-pc-linux-gnu
1249 checking for sed... sed
1250 checking for a sed that does not truncate output... /bin/sed
1251 checking for ld used by gcc... /usr/i486-slackware-linux/bin/ld
1252 checking if the linker (/usr/i486-slackware-linux/bin/ld) is GNU ld... yes
1253 checking for /usr/i486-slackware-linux/bin/ld option to reload object files... -r
1254 checking for BSD-compatible nm... /usr/bin/nm -B
1255 checking whether ln -s works... yes
1256 checking how to recognise dependent libraries... pass_all
1257 checking dlfcn.h usability... yes
1258 checking dlfcn.h presence... yes
1259 checking for dlfcn.h... yes
1260 checking whether we are using the GNU C++ compiler... yes
1261 checking whether c++ accepts -g... yes
1262 checking how to run the C++ preprocessor... c++ -E
1263 checking whether we are using the GNU Fortran 77 compiler... yes
1264 checking whether g77 accepts -g... yes
1265 checking the maximum length of command line arguments... 32768
1266 checking command to parse /usr/bin/nm -B output from gcc object... ok
1267 checking for objdir... .libs
1268 checking for ar... ar
1269 checking for ranlib... ranlib
1270 checking for strip... strip
1271 checking if gcc static flag  works... yes
1272 checking if gcc supports -fno-rtti -fno-exceptions... no
1273 checking for gcc option to produce PIC... -fPIC
1274 checking if gcc PIC flag -fPIC works... yes
1275 checking if gcc supports -c -o file.o... yes
1276 checking whether the gcc linker (/usr/i486-slackware-linux/bin/ld) supports shared libraries... yes
1277 checking whether -lc should be explicitly linked in... no
1278 checking dynamic linker characteristics... GNU/Linux ld.so
1279 checking how to hardcode library paths into programs... immediate
1280 checking whether stripping libraries is possible... yes
1281 checking if libtool supports shared libraries... yes
1282 checking whether to build shared libraries... yes
1283 checking whether to build static libraries... no
1284 configure: creating libtool
1285 appending configuration tag "CXX" to libtool
1286 checking for ld used by c++... /usr/i486-slackware-linux/bin/ld
1287 checking if the linker (/usr/i486-slackware-linux/bin/ld) is GNU ld... yes
1288 checking whether the c++ linker (/usr/i486-slackware-linux/bin/ld) supports shared libraries... yes
1289 checking for c++ option to produce PIC... -fPIC
1290 checking if c++ PIC flag -fPIC works... yes
1291 checking if c++ supports -c -o file.o... yes
1292 checking whether the c++ linker (/usr/i486-slackware-linux/bin/ld) supports shared libraries... yes
1293 checking dynamic linker characteristics... GNU/Linux ld.so
1294 checking how to hardcode library paths into programs... immediate
1295 checking whether stripping libraries is possible... yes
1296 appending configuration tag "F77" to libtool
1297 checking if libtool supports shared libraries... yes
1298 checking whether to build shared libraries... yes
1299 checking whether to build static libraries... no
1300 checking for g77 option to produce PIC... -fPIC
1301 checking if g77 PIC flag -fPIC works... yes
1302 checking if g77 supports -c -o file.o... yes
1303 checking whether the g77 linker (/usr/i486-slackware-linux/bin/ld) supports shared libraries... yes
1304 checking dynamic linker characteristics... GNU/Linux ld.so
1305 checking how to hardcode library paths into programs... immediate
1306 checking whether stripping libraries is possible... yes
1307 checking for malloc in -lefence... no
1308 checking for strstr... yes
1309 checking target system type... i686-pc-linux-gnu
1310 checking for javah in user's PATH... not found
1311 checking for javah in known locations... not found
1312 configure: WARNING:  Invalid JNI include dir, exit!
1313 configure: WARNING: SLOG2SDK: No sub-package has been configured
1314 MPE2:  "src/misc" "src/callstack" "src/logging" "src/wrappers" "src/graphics" "src/collchk" "src/slog2sdk" have been configured
1315 checking the sizeof MPI_Offset... 8
1316 checking whether the Fortran Offset type works with Fortran77... yes
1317 checking whether the Fortran Offset type works with Fortran90... yes
1318 Running Configure for F90 Type routines
1319 checking for cc... gcc
1320 checking whether the C compiler sets its return status correctly... yes
1321 checking for an ANSI C-conforming const... no
1322 checking that f works as the extension for Fortran 90 program... yes
1323 checking for Fortran 90 compiler default output file name... a.out
1324 checking whether the Fortran 90 compiler works... yes
1325 checking whether we are cross compiling... no
1326 checking for suffix of executables...
1327 checking for suffix of object files... o
1328 checking whether we are using the GNU Fortran 90 compiler... no
1329 checking whether ifort accepts -g... yes
1330 checking whether Fortran 90 accepts f90 suffix... yes
1331 checking for precision and range of reals...  6 , 37
1332 checking for precision and range of double precision...  15 , 307
1333 checking for range of integers...  9
1334 checking whether we are using the GNU Fortran 77 compiler... yes
1335 checking whether g77 accepts -g... yes
1336 checking for linker for Fortran main programs... Use Fortran to link programs
1337 checking for Fortran 77 name mangling... lower underscore
1338 checking for available integer kinds and ranges...  2 , 1, 4 , 2, 9 , 4, 18 , 8,
1339  {  2 , 1 , 1 }, {  4 , 2 , 2 }, {  9 , 4 , 4 }, {  18 , 8 , 8 },
1340 configure: creating ./config.status
1341 config.status: creating mpif90model.h
1342 configure: creating ./config.status
1343 config.status: creating Makefile
1344 config.status: creating src/Makefile
1345 config.status: creating src/include/Makefile
1346 config.status: creating src/include/mpich2info.h
1347 config.status: creating mpich2-doxygen
1348 config.status: creating src/include/mpichtimer.h
1349 config.status: creating src/binding/Makefile
1350 config.status: creating src/binding/cxx/Makefile
1351 config.status: creating src/binding/cxx/mpicxx.h
1352 config.status: creating src/binding/f77/Makefile
1353 config.status: creating src/binding/f77/mpif.h
1354 config.status: creating src/binding/f77/setbotf.f
1355 config.status: creating src/binding/f90/Makefile
1356 config.status: creating src/binding/f90/mpi_sizeofs.f90
1357 config.status: creating src/pkgconfig/mpich2-ch3.pc
1358 config.status: creating src/pkgconfig/Makefile
1359 config.status: creating src/env/mpicc
1360 config.status: creating src/env/mpicc.conf
1361 config.status: creating src/env/mpicc.bash
1362 config.status: creating src/env/mpicxx
1363 config.status: creating src/env/mpicxx.conf
1364 config.status: creating src/env/mpicxx.bash
1365 config.status: creating src/env/mpif77
1366 config.status: creating src/env/mpif77.conf
1367 config.status: creating src/env/mpif77.bash
1368 config.status: creating src/env/mpif90
1369 config.status: creating src/env/mpif90.conf
1370 config.status: creating src/env/mpif90.bash
1371 config.status: creating src/env/parkill
1372 config.status: creating src/env/Makefile
1373 config.status: creating src/util/createshlib
1374 config.status: creating src/mpi/Makefile
1375 config.status: creating src/mpi/attr/Makefile
1376 config.status: creating src/mpi/coll/Makefile
1377 config.status: creating src/mpi/comm/Makefile
1378 config.status: creating src/mpi/datatype/Makefile
1379 config.status: creating src/mpi/debugger/Makefile
1380 config.status: creating src/mpi/errhan/Makefile
1381 config.status: creating src/mpi/group/Makefile
1382 config.status: creating src/mpi/init/Makefile
1383 config.status: creating src/mpi/misc/Makefile
1384 config.status: creating src/mpi/pt2pt/Makefile
1385 config.status: creating src/mpi/rma/Makefile
1386 config.status: creating src/mpi/spawn/Makefile
1387 config.status: creating src/mpi/timer/Makefile
1388 config.status: creating src/mpi/topo/Makefile
1389 config.status: creating src/mpid/Makefile
1390 config.status: creating src/mpid/common/Makefile
1391 config.status: creating src/mpid/common/datatype/Makefile
1392 config.status: creating src/mpid/common/datatype/dataloop/Makefile
1393 config.status: creating src/mpid/common/locks/Makefile
1394 config.status: creating src/pm/Makefile
1395 config.status: creating src/pmi/Makefile
1396 config.status: creating src/nameserv/Makefile
1397 config.status: creating src/nameserv/file/Makefile
1398 config.status: creating src/nameserv/mpd/Makefile
1399 config.status: creating src/nameserv/pmi/Makefile
1400 config.status: creating src/nameserv/test/Makefile
1401 config.status: creating src/util/Makefile
1402 config.status: creating src/util/info/Makefile
1403 config.status: creating src/util/instrm/Makefile
1404 config.status: creating src/util/thread/Makefile
1405 config.status: creating src/util/thread/mpe_thread.h
1406 config.status: creating src/util/mem/Makefile
1407 config.status: creating src/util/msgs/Makefile
1408 config.status: creating src/util/param/Makefile
1409 config.status: creating src/util/dbg/Makefile
1410 config.status: creating src/util/dbg/getfuncstack
1411 config.status: creating src/util/osserv/Makefile
1412 config.status: creating src/include/mpi.h
1413 config.status: creating test/Makefile
1414 config.status: creating test/util/Makefile
1415 config.status: creating test/basic/Makefile
1416 config.status: creating test/commands/Makefile
1417 config.status: creating test/commands/cmdtests
1418 config.status: creating test/mpid/Makefile
1419 config.status: creating test/mpid/ch3/Makefile
1420 config.status: creating examples/Makefile
1421 config.status: creating examples/f77/Makefile
1422 config.status: creating examples/f90/Makefile
1423 config.status: creating examples/cxx/Makefile
1424 config.status: creating src/util/logging/Makefile
1425 config.status: creating src/util/logging/common/Makefile
1426 config.status: creating doc/Makefile
1427 config.status: creating doc/mansrc/Makefile
1428 config.status: creating doc/mansrc/createhtmlindex
1429 config.status: creating doc/refman/Makefile
1430 config.status: creating doc/installguide/Makefile
1431 config.status: creating doc/userguide/Makefile
1432 config.status: creating doc/logging/Makefile
1433 config.status: creating doc/design/Makefile
1434 config.status: creating doc/smpd/Makefile
1435 config.status: creating doc/windev/Makefile
1436 config.status: creating src/include/mpichconf.h
1437 config.status: src/include/mpichconf.h is unchanged
1438 config.status: executing default-1 commands
1439 config.status: executing default-2 commands
1440 config.status: executing default-3 commands
1441 config.status: executing default-4 commands
1442 copying ./src/util/thread/mpe_thread_posix.c to src/util/thread/mpe_thread.c
1443 moving mpe_thread.h to src/include
1444 config.status: executing default-5 commands
1445 config.status: executing default-6 commands
1446 config.status: executing default-7 commands
1447 config.status: executing default-8 commands
1448 config.status: executing default-9 commands
1449 Updating dependency directories .deps
1450 config.status: executing default-10 commands
1451 config.status: executing default-11 commands
1452 config.status: executing default-12 commands
1453 config.status: executing default-13 commands
1454 config.status: executing default-14 commands
1455 configure: configuring in test/mpi
1456 configure: running /bin/sh './configure' --prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/  '--prefix=/home/u3/germaneau/soft/science/mpich2-1.0.7.7_install/' '--enable-sharedlibs=gcc' '--enable-dynamiclibs' --cache-file=/dev/null --srcdir=.
1457 RUNNING CONFIGURE FOR MPI TESTS
1458 checking for make... make
1459 checking whether clock skew breaks make... no
1460 checking whether make supports include... yes
1461 checking whether make allows comments in actions... yes
1462 checking for virtual path format... VPATH
1463 checking whether make sets CFLAGS... no
1464 checking for gcc... gcc
1465 checking for C compiler default output file name... a.out
1466 checking whether the C compiler works... yes
1467 checking whether we are cross compiling... no
1468 checking for suffix of executables...
1469 checking for suffix of object files... o
1470 checking whether we are using the GNU C compiler... yes
1471 checking whether gcc accepts -g... yes
1472 checking for gcc option to accept ANSI C... none needed
1473 checking whether we are using the GNU Fortran 77 compiler... yes
1474 checking whether g77 accepts -g... yes
1475 checking whether we are using the GNU C++ compiler... yes
1476 checking whether c++ accepts -g... yes
1477 checking whether long double is supported... yes
1478 checking whether long long is supported... yes
1479 checking for an ANSI C-conforming const... yes
1480 checking for restrict... __restrict
1481 checking how to run the C preprocessor... gcc -E
1482 checking for unistd.h... yes
1483 checking for stdarg.h... yes
1484 checking for string.h... yes
1485 checking for stdlib.h... yes
1486 checking for memory.h... yes
1487 Configuring tests for MPICH2
1488 checking whether struct hostent contains h_addr_list... no
1489 checking whether integer*4 is supported... yes
1490 checking whether integer*8 is supported... yes
1491 checking whether integer*16 is supported... no
1492 checking for Fortran 77 name mangling... lower underscore
1493 checking for Fortran libraries needed for getarg... none needed
1494 checking whether Fortran has pointer declaration... no
1495 checking that f works as the extension for Fortran 90 program... yes
1496 checking whether we are using the GNU Fortran 90 compiler... no
1497 checking whether ifort accepts -g... yes
1498 checking for extension for Fortran 90 programs... f90
1499 checking whether the Fortran 90 compiler (ifort  ) works... yes
1500 checking whether the Fortran 90 compiler (ifort  ) is a cross-compiler... no
1501 checking whether Fortran 90 has Cray-style pointer declaration... yes
1502 checking whether <iostream> available... yes
1503 checking whether the compiler implements namespaces... yes
1504 checking whether the compiler implements the namespace std... yes
1505 checking for perl... /usr/bin/perl
1506 checking for etags... etags
1507 configure: creating ./config.status
1508 config.status: creating maint/testmerge
1509 config.status: creating runtests
1510 config.status: creating Makefile
1511 config.status: creating basic/Makefile
1512 config.status: creating attr/Makefile
1513 config.status: creating util/Makefile
1514 config.status: creating coll/Makefile
1515 config.status: creating comm/Makefile
1516 config.status: creating datatype/Makefile
1517 config.status: creating errhan/Makefile
1518 config.status: creating group/Makefile
1519 config.status: creating info/Makefile
1520 config.status: creating init/Makefile
1521 config.status: creating pt2pt/Makefile
1522 config.status: creating rma/Makefile
1523 config.status: creating spawn/Makefile
1524 config.status: creating topo/Makefile
1525 config.status: creating io/Makefile
1526 config.status: creating f77/Makefile
1527 config.status: creating f77/attr/Makefile
1528 config.status: creating f77/attr/attraints.h
1529 config.status: creating f77/pt2pt/attr1aints.h
1530 config.status: creating f77/ext/add1size.h
1531 config.status: creating f77/datatype/Makefile
1532 config.status: creating f77/datatype/typeaints.h
1533 config.status: creating f77/util/Makefile
1534 config.status: creating f77/coll/Makefile
1535 config.status: creating f77/comm/Makefile
1536 config.status: creating f77/topo/Makefile
1537 config.status: creating f77/init/Makefile
1538 config.status: creating f77/rma/addsize.h
1539 config.status: creating f77/pt2pt/Makefile
1540 config.status: creating f77/info/Makefile
1541 config.status: creating f77/spawn/Makefile
1542 config.status: creating f77/spawn/type1aint.h
1543 config.status: creating f77/rma/Makefile
1544 config.status: creating f77/ext/Makefile
1545 config.status: creating f77/ext/testlist
1546 config.status: creating f77/io/Makefile
1547 config.status: creating f77/io/iooffset.h
1548 config.status: creating f77/io/iodisp.h
1549 config.status: creating f77/io/ioaint.h
1550 config.status: creating f90/Makefile
1551 config.status: creating f90/attr/Makefile
1552 config.status: creating f90/datatype/Makefile
1553 config.status: creating f90/f90types/Makefile
1554 config.status: creating f90/util/Makefile
1555 config.status: creating f90/coll/Makefile
1556 config.status: creating f90/comm/Makefile
1557 config.status: creating f90/topo/Makefile
1558 config.status: creating f90/init/Makefile
1559 config.status: creating f90/pt2pt/Makefile
1560 config.status: creating f90/rma/Makefile
1561 config.status: creating f90/info/Makefile
1562 config.status: creating f90/spawn/Makefile
1563 config.status: creating f90/timer/Makefile
1564 config.status: creating f90/ext/Makefile
1565 config.status: creating f90/ext/testlist
1566 config.status: creating f90/io/Makefile
1567 config.status: creating f90/misc/Makefile
1568 config.status: creating cxx/Makefile
1569 config.status: creating cxx/util/Makefile
1570 config.status: creating cxx/attr/Makefile
1571 config.status: creating cxx/pt2pt/Makefile
1572 config.status: creating cxx/comm/Makefile
1573 config.status: creating cxx/coll/Makefile
1574 config.status: creating cxx/info/Makefile
1575 config.status: creating cxx/datatype/Makefile
1576 config.status: creating cxx/io/Makefile
1577 config.status: creating cxx/init/Makefile
1578 config.status: creating cxx/rma/Makefile
1579 config.status: creating cxx/spawn/Makefile
1580 config.status: creating threads/Makefile
1581 config.status: creating threads/pt2pt/Makefile
1582 config.status: creating threads/util/Makefile
1583 config.status: creating threads/comm/Makefile
1584 config.status: creating errors/Makefile
1585 config.status: creating errors/coll/Makefile
1586 config.status: creating errors/comm/Makefile
1587 config.status: creating errors/group/Makefile
1588 config.status: creating errors/pt2pt/Makefile
1589 config.status: creating errors/rma/Makefile
1590 config.status: creating errors/spawn/Makefile
1591 config.status: creating errors/topo/Makefile
1592 config.status: creating errors/io/Makefile
1593 config.status: creating errors/cxx/Makefile
1594 config.status: creating errors/cxx/errhan/Makefile
1595 config.status: creating errors/cxx/io/Makefile
1596 config.status: creating errors/f77/Makefile
1597 config.status: creating errors/f90/Makefile
1598 config.status: creating manual/Makefile
1599 config.status: creating manual/manyconnect
1600 config.status: creating perf/Makefile
1601 config.status: creating testlist
1602 config.status: creating cxx/testlist
1603 config.status: creating f77/testlist
1604 config.status: creating f90/testlist
1605 config.status: creating errors/testlist
1606 config.status: creating errors/cxx/testlist
1607 config.status: creating include/mpitestconf.h
1608 config.status: include/mpitestconf.h is unchanged
1609 config.status: executing default-1 commands
1610 config.status: executing default-2 commands
1611 config.status: executing default-3 commands
1612 Configuration completed.