Canopy 3 homolog (zebrafish) (Cnpy3)

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Finding cDNAs

UGID:401097 UniGene Rn.43984 Rattus norvegicus (Norway rat) Cnpy3

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Canopy 3 homolog (zebrafish) (Cnpy3)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001128182.1	canopy 3 homolog	R. norvegicus	100.0	275
NP_082341.1	canopy 3 homolog	M. musculus	97.5	275
NP_006577.2	trinucleotide repeat containing 5	H. sapiens	95.3	277
NP_001034894.2	trinucleotide repeat containing 5	D. rerio	74.8	265
NP_649089.2	CG11577	D. melanogaster	54.7	192

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; embryonic tissue; prostate; connective tissue; dorsal root ganglion; pituitary gland; brain; ovary; uncharacterized tissue; spleen; lung; thymus; eye; placenta; liver

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	9
Map position:	9q12
UniSTS entry:		RH133362

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC166762.1	Rattus norvegicus canopy 3 homolog (zebrafish), mRNA (cDNA clone MGC:188521 IMAGE:7931606), complete cds	PA
	NM_001134710.1	Rattus norvegicus canopy 3 homolog (zebrafish) (Cnpy3), mRNA	PA

EST sequences (10 of 40) [Show all sequences]

AA899630.1	Clone UI-R-E0-dg-f-05-0-UI	embryonic tissue	3' read	A
AI603000.1	Clone UI-R-AC1-xv-e-05-0-UI	embryonic tissue	3' read	A
AI411659.1	Clone ROVEM53	ovary	3' read
AI411668.1	Clone ROVEM53	ovary	3' read
BF524829.1	Clone UI-R-AC1-xv-e-05-0-UI	embryonic tissue	5' read	P
BF549371.1	Clone UI-R-A0-bc-b-09-0-UI	mixed	5' read
BF558552.1	Clone UI-R-E0-dg-f-05-0-UI	embryonic tissue	5' read
BI293679.1	Clone UI-R-DK0-cdu-d-10-0-UI	mixed	3' read	A
BI296769.1	Clone UI-R-DK0-cfz-b-02-0-UI	mixed	3' read	A
BI275197.1	Clone UI-R-CX0-bxc-f-10-0-UI	placenta	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria