PEBLM2

Library Description

primary culture, peripheral blood mononuclear cells

Source: Takao Isogai, Helix Research Institute

Gene Content Analysis

7,781 ESTs from this library were grouped into 3,016 UniGene entries (putative genes) [UniGene build #218, 05-Jan-2009]. EST counts for each entry may be used to calculate an approximate expression level in transcripts per million (TPM).

ESTs	TPM		UniGene Entry
121	15551		Hs.702021	Heat shock 70kDa protein 8.
101	12980		Hs.190495	Glycoprotein (transmembrane) nmb.
90	11567		Hs.520348	Ubiquitin C.
87	11181		Hs.370858	Fucosidase, alpha-L- 1, tissue.
86	11053		Hs.644639	Eukaryotic translation elongation factor 1 alpha 1.
58	7454		Hs.715525	Thioredoxin interacting protein.
51	6554		Hs.82848	Selectin L.
47	6040		Hs.514220	Granulin.
45	5783		Hs.292493	X-ray repair complementing defective repair in Chinese hamster cells 6.
39	5012		Hs.520640	Actin, beta.
39	5012		Hs.509736	Heat shock protein 90kDa alpha (cytosolic), class B member 1.
39	5012		Hs.370036	Chemokine (C-C motif) receptor 7.
36	4627		Hs.446852	Eukaryotic translation initiation factor 3, subunit L.
35	4498		Hs.636480	Tubulin, beta.
34	4370		Hs.595133	CD83 molecule.
32	4113		Hs.712553	Membrane-spanning 4-domains, subfamily A, member 1.
32	4113		Hs.533282	Non-POU domain containing, octamer-binding.
30	3856		Hs.297413	Matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase).
30	3856		Hs.191346	Septin 7.
29	3727		Hs.654514	Protein tyrosine phosphatase, receptor type, C.
28	3599		Hs.718603	Fas apoptotic inhibitory molecule 3.
28	3599		Hs.279806	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5.
26	3341		Hs.510635	Immunoglobulin heavy constant gamma 1 (G1m marker).
25	3213		Hs.79322	Glutaminyl-tRNA synthetase.
25	3213		Hs.299055	GDP dissociation inhibitor 2.
24	3084		Hs.268326	C-type lectin domain family 2, member D.
23	2956		Hs.79110	Nucleolin.
23	2956		Hs.522257	Heterogeneous nuclear ribonucleoprotein K.
22	2827		Hs.808	Heterogeneous nuclear ribonucleoprotein F.
22	2827		Hs.466471	Glucose phosphate isomerase.
22	2827		Hs.387804	Poly(A) binding protein, cytoplasmic 1.
22	2827		Hs.380118	RNA binding motif protein, X-linked.
22	2827		Hs.370581	CAP, adenylate cyclase-associated protein 1 (yeast).
21	2699		Hs.534770	Pyruvate kinase, muscle.
21	2699		Hs.26670	Phosphoinositide-3-kinase interacting protein 1.
20	2570		Hs.587558	Neutrophil cytosolic factor 2.
20	2570		Hs.412117	Annexin A6.
20	2570		Hs.375957	Integrin, beta 2 (complement component 3 receptor 3 and 4 subunit).
19	2442		Hs.459940	Lipopolysaccharide-induced TNF factor.
19	2442		Hs.433512	ARP3 actin-related protein 3 homolog (yeast).
18	2313		Hs.113916	Chemokine (C-X-C motif) receptor 5.
17	2185		Hs.524599	Nucleosome assembly protein 1-like 1.
17	2185		Hs.467192	Protein phosphatase 2 (formerly 2A), regulatory subunit A, alpha isoform.
16	2056		Hs.708025	Transmembrane BAX inhibitor motif containing 6.
16	2056		Hs.592455	Transcribed locus, strongly similar to NP_001003447.1 hypothetical protein LOC445053 [Danio rerio].
16	2056		Hs.518475	Eukaryotic translation initiation factor 4A, isoform 2.
16	2056		Hs.470627	Lymphocyte-specific protein tyrosine kinase.
16	2056		Hs.232194	KIAA0174.
16	2056		Hs.22546	Cytochrome b, ascorbate dependent 3.
15	1928		Hs.718460	Selenophosphate synthetase 2.
15	1928		Hs.200804	Syndecan binding protein (syntenin).
15	1928		Hs.146668	Serine incorporator 1.
15	1928		Hs.124922	Lymphoid-restricted membrane protein.
14	1799		Hs.647101	GTPase, IMAP family member 4.
14	1799		Hs.584801	Splicing factor, arginine/serine-rich 2.
14	1799		Hs.419240	Solute carrier family 2 (facilitated glucose transporter), member 3.
14	1799		Hs.3873	Palmitoyl-protein thioesterase 1.
14	1799		Hs.369920	RAP1B, member of RAS oncogene family.
14	1799		Hs.300624	TAR DNA binding protein.
13	1671		Hs.709313	Beta-2-microglobulin.
13	1671		Hs.643030	Lipase A, lysosomal acid, cholesterol esterase.
13	1671		Hs.628678	Vimentin.
13	1671		Hs.523774	EH-domain containing 1.
13	1671		Hs.500775	Zinc finger protein 207.
13	1671		Hs.496096	Pim-2 oncogene.
13	1671		Hs.438720	Minichromosome maintenance complex component 7.
12	1542		Hs.89643	Transketolase.
12	1542		Hs.75069	Serine hydroxymethyltransferase 2 (mitochondrial).
12	1542		Hs.66394	Ring finger protein 4.
12	1542		Hs.578978	Transcribed locus, strongly similar to NP_775134.1 tropomyosin 3, gamma isoform 2 [Rattus norvegicus].
12	1542		Hs.567374	Eukaryotic translation initiation factor 3, subunit C.
12	1542		Hs.534347	Chemokine (C-C motif) ligand 22.
12	1542		Hs.527861	Amplified in osteosarcoma.
12	1542		Hs.464336	Prolyl 4-hydroxylase, beta polypeptide.
12	1542		Hs.381099	Lymphocyte cytosolic protein 1 (L-plastin).
12	1542		Hs.369761	DAZ associated protein 2.
12	1542		Hs.268849	Glyoxalase I.
12	1542		Hs.121432	Peptidylprolyl isomerase domain and WD repeat containing 1.
11	1414		Hs.73799	Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
11	1414		Hs.711490	Programmed cell death 4 (neoplastic transformation inhibitor).
11	1414		Hs.690198	Cell division cycle 42 (GTP binding protein, 25kDa).
11	1414		Hs.610830	Protein kinase C substrate 80K-H.
11	1414		Hs.596078	High-mobility group box 1.
11	1414		Hs.525600	Heat shock protein 90kDa alpha (cytosolic), class A member 1.
11	1414		Hs.518244	Ribophorin I.
11	1414		Hs.517145	Enolase 1, (alpha).
11	1414		Hs.497599	Tryptophanyl-tRNA synthetase.
11	1414		Hs.469030	Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase.
11	1414		Hs.386567	Guanylate binding protein 2, interferon-inducible.
11	1414		Hs.280342	Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1).
11	1414		Hs.192374	Heat shock protein 90kDa beta (Grp94), member 1.
11	1414		Hs.139896	Macrophage erythroblast attacher.
11	1414		Hs.126517	CD55 molecule, decay accelerating factor for complement (Cromer blood group).
10	1285		Hs.82116	Myeloid differentiation primary response gene (88).
10	1285		Hs.709184	Amyloid beta (A4) precursor-like protein 2.
10	1285		Hs.651923	Calponin 2.
10	1285		Hs.648394	Eukaryotic translation initiation factor 4B.
10	1285		Hs.634882	ADP-ribosylation factor-like 6 interacting protein 1.
10	1285		Hs.554762	Ribosomal protein L22.
10	1285		Hs.520313	CD164 molecule, sialomucin.

Source: NCBI UniGene

EST Sequences

7,971 EST sequences from this library have been submitted to the public sequence database as of 05-Jan-2009.

Source: NCBI GenBank

Click the button to save sequences to a file (FASTA format)

Keywords

• blood
• normal
• unknown developmental stage
• peripheral blood mononuclear cell

Source: NCBI Clone Registry

References

Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al., Genome Res 16, 55-65 (2006).