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UniSTS:8800 Links
WI-12606
Homo sapiens chromosome 1, loci THBS3 and LOC100129268
Pan troglodytes chromosome 1, locus THBS3

Found by e-PCR in sequences from Homo sapiens and Pan troglodytes.

Primer InformationHelp

Forward primer:ACCAGAAGGACACAGATGGC
Reverse primer:ATCCCCACCTGATCCAAATT
PCR product size:125 (bp), Homo sapiens
GenBank Accession:G23827 R89531

   Homo sapiens
Name: WI-12606
Also known as: EST327967 stSG13965
Polymorphism info:  

Cross References Help
Gene GeneID:100129268
 Symbol:LOC100129268
 Description:hypothetical protein LOC100129268
 Position:1q22
Gene GeneID:7059
 Symbol:THBS3
 Description:thrombospondin 3
 Position:1q21
UniGeneHs.169875 Thrombospondin 3
 Hs.658188 MRNA; cDNA DKFZp686J1738 (from clone DKFZp686J1738)

Mapping InformationHelp
WI-12606 Sequence Map: Chr 1|HuRef Map Viewer
  Position: 126533283-126533407 (bp)
 
WI-12606 Sequence Map: Chr 1|Celera Map Viewer
  Position: 128243461-128243585 (bp)
 
WI-12606 Sequence Map: Chr 1 Map Viewer
  Position: 153436804-153436928 (bp)
 
WI-12606 NCBI RH Map: Chr 1 Map Viewer
  Position: 1143.5 (cR)
  Lod score: 1.92
 
WI-12606 Whitehead-RH Map: Chr 1 Map Viewer
  Position: 682.2 (cR3000)
  Lod score: P0.06
 
stSG13965 GeneMap99-GB4 Map: Chr 1 Map Viewer
  Position: 557.49 (cR3000)
  Lod score: 0.00
  Reference Interval: D1S514-D1S2635
 
WI-12606 GeneMap99-GB4 Map: Chr 1 Map Viewer
  Position: 538.67 (cR3000)
  Lod score: 0.51
  Reference Interval: D1S514-D1S2635

Electronic PCR results Help
Genomic (5 of 9)[Show All Hits]
G23827.1 24 .. 148 (125 bp)  
AF023268.1 72851 .. 72975 (125 bp)  
AL713999.28 28669 .. 28793 (125 bp)  
CH003448.1 128061507 .. 128061631 (125 bp)  
CH003496.1 130392308 .. 130392432 (125 bp)  
 
ESTs (5 of 10)[Show All Hits]
R85557.1 54 .. 178 (125 bp)  
R85878.1 54 .. 178 (125 bp)  
R89531.1 24 .. 148 (125 bp)  
AI571246.1 66 .. 190 (125 bp)  
AI937487.1 58 .. 182 (125 bp)  
 
Whole Genome Shotgun sequences (4)
AADD01008841.1 7371 .. 7495 (125 bp)  
AADC01007398.1 72833 .. 72957 (125 bp)  
AADB02000962.1 8456 .. 8580 (125 bp)  
ABBA01016713.1 13178 .. 13302 (125 bp)  
 

   Pan troglodytes
Name: WI-12606
Polymorphism info:  

Cross References Help
Gene GeneID:457359
 Symbol:THBS3
 Description:thrombospondin 3
 Position: 

Mapping InformationHelp
WI-12606 Sequence Map: Chr 1 Map Viewer
  Position: 134366268-134366392 (bp)

Electronic PCR results Help
Genomic (1)
CM000314.1 134366268 .. 134366392 (125 bp)  
 
Whole Genome Shotgun sequences (2)
AADA01169031.1 12018 .. 12142 (125 bp)  
AACZ02009555.1 12324 .. 12448 (125 bp)  
 

 

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