14 proteins |
S | COG3795 | Uncharacterized protein conserved in bacteria | Help | |
---|---|---|---|---|---|
6 from | query genome Mesorhizobium loti (Rhizobiales | Alphaproteobacteria) | ||||
mll2871 mll4253 mll7838 mlr2587 mlr2988 mlr4612 |
122 letters (r) 0 0 560 = ||| 1 mlr4612 (122) = 0 -8 232 = | 3 PA1349 (116) = 0 19 218 = | 5 PA1354 (141) = 0 -4 214 = ||| 3 mll4253 (118) = 0 12 203 = ||| 5 mlr2587 (134) = 9 -6 187 = || 3 CC0390 (125) = 0 20 180 = | 5 RSp0637 (143) = 0 3 178 = ||| 6 SMc01151 (124) = 0 0 168 = ||| 4 mll7838 (121) = 0 0 162 = ||| 6 mll2871 (124) = -2 18 161 = ||| 5 AGc1556 (140) = 0 2 123 = ||| 7 mlr2988 (124) = 0 7 110 = ||| 9 SMc00939 (129) = 430 2 74 _ 255 alr7046 (541) COG0464 69 166 66 _ 255 all0426 (353) COG0334 -28 398 64 _ 255 BS_dhaS (495) COG1012 288 171 64 255 MK1361 (585) 307 263 64 _ |255 VC2711 (692) COG1200 -11 -5 63 ||| 7 mlr4106 (108) 1249 247 63 255 SPAC23D3.13c (1616) 1 296 61 _ 255 BH2585 (416) COG1323 127 -5 60 _ |||255 mll0395_1 (244) COG1211 308 263 59 _ |255 YPO0036 (693) COG1200 254 40 57 _ |255 PA5084 (416) COG0665
BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mlr4612 (122 letters) Database: myva 192,987 sequences; 59,019,183 total letters Score E Sequences producing significant alignments: (bits) Value mlr4612 220 5e-58 PA1349 94 5e-20 PA1354 89 2e-18 mll4253 87 6e-18 mlr2587 83 1e-16 CC0390 77 8e-15 RSp0637 74 5e-14 SMc01151 73 9e-14 mll7838 69 1e-12 mll2871 67 7e-12 AGc1556 67 8e-12 mlr2988 52 2e-07 SMc00939 47 8e-06 alr7046 33 0.11 all0426 30 0.91 BS_dhaS 29 1.4 MK1361 29 1.5 VC2711 29 1.6 mlr4106 29 1.9 SPAC23D3.13c 29 2.2 BH2585 28 3.4 mll0395_1 28 4.2 YPO0036 27 5.5 PA5084 27 9.4 # >mlr4612 # Length = 122 # # Score = 220 bits (560), Expect = 5e-58 # Identities = 122/122 (100%), Positives = 122/122 (100%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA # Sbjct: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPIWELADYMP 120 # DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPIWELADYMP # Sbjct: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPIWELADYMP 120 # # Query: 121 QK 122 # QK # Sbjct: 121 QK 122 # # # >PA1349 # Length = 116 # # Score = 94.0 bits (232), Expect = 5e-20 # Identities = 47/116 (40%), Positives = 74/116 (63%), Gaps = 2/116 (1%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # M+Y+ +I DE+ LAA+P E+ + Y++ L K+G ++A L+ Q T++R # Sbjct: 1 MKYLCLIYFDEAKLAAVPAEELAAIVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQ 60 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPI--WE 114 # G+ + DGP+A+TKEQL GFY+IEA D++ A++ AA+ P G VE+RP+ WE # Sbjct: 61 GGRLAMTDGPFAETKEQLGGFYLIEARDLNQALQIAAKIPPGRLGCVEVRPVKEWE 116 # # # >PA1354 # Length = 141 # # Score = 88.6 bits (218), Expect = 2e-18 # Identities = 47/121 (38%), Positives = 75/121 (61%), Gaps = 6/121 (4%) # # Query: 1 MRYMLMINNDESALAA-MPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRI 59 # MR+M+++ +++ A MP ++++ AA G Y E L K+G LAGE L+P+ VR # Sbjct: 1 MRFMVIVKATQASEAGEMP---SEELLAAMGRYNEELVKAGVMLAGEGLQPSAKGARVRF 57 # # Query: 60 ADGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTG--TVELRPIWELAD 117 # + VIDGP+A+T+E +AGF+M + A ++ AIEW RCP G +E+R ++E D # Sbjct: 58 SGNARTVIDGPFAETRELIAGFWMFQVASLEEAIEWVKRCPNPFDGESEIEIRQVFEAED 117 # # Query: 118 Y 118 # + # Sbjct: 118 F 118 # # # >mll4253 # Length = 118 # # Score = 87.0 bits (214), Expect = 6e-18 # Identities = 45/115 (39%), Positives = 72/115 (62%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # M+Y+ ++ +E L A+ VE+ ++ A AY +L + G + + L+ + + SVR # Sbjct: 1 MKYVCLVYGEEKDLYALTVERGAKLDADSLAYDRSLDQEGKLIIAQALQSVRTSKSVRRR 60 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPIWEL 115 # GK V DGP+A+TKEQL GF M+EA ++D A++ AA P A GTVE+R I+++ # Sbjct: 61 KGKRLVTDGPFAETKEQLLGFVMVEADNLDEALDIAAGIPLAELGTVEVRAIYDI 115 # # # >mlr2587 # Length = 134 # # Score = 82.8 bits (203), Expect = 1e-16 # Identities = 44/118 (37%), Positives = 66/118 (55%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # MR+M+++ A AA V + A Y E LKK+G LA + L P + V # Sbjct: 1 MRFMMLMIPGGYAEAAPDVRPDAKGVEAMMKYNEELKKAGVLLALDGLHPPSSGARVSFK 60 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPIWELADY 118 # GK V DGP+A+ KE L G+++I+ + AIEWA RCPA +E+R ++E++D+ # Sbjct: 61 GGKPVVTDGPFAEVKEVLGGYWVIDVRSREEAIEWARRCPAGENDLIEVRRVFEMSDF 118 # # # >CC0390 # Length = 125 # # Score = 76.6 bits (187), Expect = 8e-15 # Identities = 40/112 (35%), Positives = 64/112 (56%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # M+Y L++ +E+ A + + AA+ A+ L + G G+ L+ + T++R + # Sbjct: 10 MQYALLLYENEAVYAEEGAMSLEAIIAAHNAFAADLAQQGVLRGGQGLKSSDTATTLRKS 69 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPI 112 # G + DGPYA+ +EQL GFY+I+ D+D A+ A R P A G VE+RPI # Sbjct: 70 RGAETLHDGPYAEAREQLGGFYVIDVPDLDAALAIAKRIPFAGDGAVEVRPI 121 # # # >RSp0637 # Length = 143 # # Score = 73.9 bits (180), Expect = 5e-14 # Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 7/122 (5%) # # Query: 1 MRYMLM-INNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRI 59 # MR+M++ + + ++ MP E + A G Y E+L +G L GE L P+ A V # Sbjct: 1 MRFMVLRLADPDTEAGVMPSEA---LLAEMGKYMESLANAGVLLGGEGLHPSAAGARVEF 57 # # Query: 60 ADGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTG---TVELRPIWELA 116 # GK VIDGP+ + KE +AG+ +++ ++ A+EW R PA G +E+R I+E # Sbjct: 58 RGGKPGVIDGPFTEAKELIAGYTILQVKSLEEALEWCKRWPAMDGGGNVRLEIRRIFEAE 117 # # Query: 117 DY 118 # D+ # Sbjct: 118 DF 119 # # # >SMc01151 # Length = 124 # # Score = 73.2 bits (178), Expect = 9e-14 # Identities = 47/122 (38%), Positives = 71/122 (57%), Gaps = 5/122 (4%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # M Y ++ NDES +A E+ +++ A ++G RL PT A ++R + # Sbjct: 1 MLYAVLCYNDESVTSAWSKEEDERVMRDLSAVQRKYVEAGKLGPVARLVPTTAAATLRHS 60 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAA--STGTVELRPIWELADY 118 # G+T V+DGP+A+TKEQL GFY+I+ A +D A+++A A STG+ E+RP LA Y # Sbjct: 61 AGETIVMDGPFAETKEQLLGFYLIDCASLDEALDFARDLSNANPSTGSYEVRP---LALY 117 # # Query: 119 MP 120 # P # Sbjct: 118 KP 119 # # # >mll7838 # Length = 121 # # Score = 69.3 bits (168), Expect = 1e-12 # Identities = 38/120 (31%), Positives = 64/120 (52%), Gaps = 1/120 (0%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # MRY +I L + ++ G Y E LK SG ++ E L + ++++ # Sbjct: 1 MRYACLIYYHPQTLFGGSPQADAALAECAG-YDEVLKASGHFVTAEALVLPEEAMTLQVR 59 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVELRPIWELADYMP 120 # DGK + +DGP+ +TKE L G +IEA D++ A+ A+ P A+ G +E+RP+ + + P # Sbjct: 60 DGKMSTVDGPFIETKEVLGGIIVIEARDLNEAVRVASGHPLATIGHIEVRPVVDFSQPRP 119 # # # >mll2871 # Length = 124 # # Score = 67.0 bits (162), Expect = 7e-12 # Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 2/114 (1%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # M Y ++ E +++ + ++ A + K+G RL PT A T++R # Sbjct: 1 MLYAILCYASEDVVSSWSKAQDDEVMANLINVQDKYAKAGRLGPVARLLPTTAATTLRKV 60 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAA--STGTVELRPI 112 # G+ VIDGP+A+TKEQ GFY +E AD+D A+E+A S G+ E+RP+ # Sbjct: 61 KGEAVVIDGPFAETKEQFLGFYTLECADLDEAVEFARELSEVNPSGGSYEIRPV 114 # # # >AGc1556 # Length = 140 # # Score = 66.6 bits (161), Expect = 8e-12 # Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 2/102 (1%) # # Query: 19 VEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIADGKTNVIDGPYADTKEQL 78 # V T ++ A G + E L +G +G+ L P+ V V++GP+ T E + # Sbjct: 17 VMPTTELMEAMGKFNEELVNAGIMQSGDGLHPSSKGKRVVFDGDSRTVVNGPFPHTNELV 76 # # Query: 79 AGFYMIEAADIDTAIEWAARCPAA--STGTVELRPIWELADY 118 # AGF++ + D+D A+EW RCP +E+RP++E+ D+ # Sbjct: 77 AGFWIWKVKDMDEAVEWVKRCPNPMLEKSEIEIRPMFEMEDF 118 # # # >mlr2988 # Length = 124 # # Score = 52.0 bits (123), Expect = 2e-07 # Identities = 38/113 (33%), Positives = 56/113 (48%), Gaps = 2/113 (1%) # # Query: 1 MRYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIA 60 # M Y ++ + E A+ A+ ++ + A L++ G RL TQ ++R # Sbjct: 1 MFYAILAYHMEDAIKALTPQEDAALMADLLKINTRLREEGTLGPSARLGATQDAFTLR-G 59 # # Query: 61 DGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAA-STGTVELRPI 112 # G VIDGP+A+TKEQL G Y+++ A D AI A ST E+RPI # Sbjct: 60 PGDGVVIDGPFAETKEQLLGLYVVDCATRDKAIAIARDLRRVNSTAVYEIRPI 112 # # # >SMc00939 # Length = 129 # # Score = 47.0 bits (110), Expect = 8e-06 # Identities = 26/67 (38%), Positives = 41/67 (60%), Gaps = 2/67 (2%) # # Query: 47 RLRPTQATTSVRIADGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAAS-TG 105 # RL T+ ++R DG +IDGP+A+TKEQL G Y+++ +++ A+E A + T # Sbjct: 47 RLGSTRDAVTLR-GDGAGMIIDGPFAETKEQLLGLYVVDCPNLEAAVETARELRRVNPTA 105 # # Query: 106 TVELRPI 112 # E+RPI # Sbjct: 106 VYEIRPI 112 # # # >alr7046 # Length = 541 # # Score = 33.1 bits (74), Expect = 0.11 # Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 13/82 (15%) # # Query: 30 GAYTEALKKSGAWLAGERLRPTQATTSVRIADGKTNVIDGPYADTKEQLAGFYMIEAADI 89 # GA E L A LA E+ RP Q T G + ++ + + +AA + # Sbjct: 460 GAELETLASEAALLAFEQERPQQVTL-------------GDLEECRKTITPLAVQDAAAV 506 # # Query: 90 DTAIEWAARCPAASTGTVELRP 111 # + EWA AAST + +P # Sbjct: 507 ERMREWAKTARAASTAIADTKP 528 # # # >all0426 # Length = 353 # # Score = 30.0 bits (66), Expect = 0.91 # Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%) # # Query: 11 ESALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIADGKTNVIDG 69 # ++ + A P +KT +M AYG + E+LK G ++ G+ + T VR +TN + G # Sbjct: 80 KAVIIANPEDKTDEMLRAYGRFVESLK--GRFITGQDVNIT--PQDVRTIKQETNYVVG 134 # # # >BS_dhaS # Length = 495 # # Score = 29.3 bits (64), Expect = 1.4 # Identities = 23/72 (31%), Positives = 32/72 (43%), Gaps = 17/72 (23%) # # Query: 60 ADGKTNVIDGPYADTKEQLAGFYMIEAADIDTAI----------EWAARCPAASTGTVEL 109 # A G T D P T E L Y +AAD+D A+ EW PA+ + # Sbjct: 32 ASGAT--FDTPNPATGETLMTLYEAQAADVDKAVKAARKAFDQGEWRTMSPASRS----- 84 # # Query: 110 RPIWELADYMPQ 121 # R +++LAD M + # Sbjct: 85 RLMYKLADLMEE 96 # # # >MK1361 # Length = 585 # # Score = 29.3 bits (64), Expect = 1.5 # Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%) # # Query: 15 AAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIADGKTNVIDG----P 70 # A P E + + YG + A+ SG +GE + + T + G V +G P # Sbjct: 303 AVAPWEPSVPVYVGYGNHEAAVVGSGGRCSGEEVFSREFVTPAELGRGPAGVSEGRGLPP 362 # # Query: 71 YADT 74 # Y DT # Sbjct: 363 YGDT 366 # # # >VC2711 # Length = 692 # # Score = 29.3 bits (64), Expect = 1.6 # Identities = 18/67 (26%), Positives = 32/67 (46%) # # Query: 13 ALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIADGKTNVIDGPYA 72 # AL A +Q + + + E + WLAG+ + T RIA G+ ++ G +A # Sbjct: 320 ALMAPTELLAEQHALNFAQWLEPMGIQVGWLAGKLKGKARETELARIASGEVKMVVGTHA 379 # # Query: 73 DTKEQLA 79 # +EQ++ # Sbjct: 380 LFQEQVS 386 # # # >mlr4106 # Length = 108 # # Score = 28.9 bits (63), Expect = 1.9 # Identities = 17/35 (48%), Positives = 20/35 (56%), Gaps = 2/35 (5%) # # Query: 80 GFYMIEAADIDTAIEWAARCP--AASTGTVELRPI 112 # G+ +IEA DID A E A CP A VE+ PI # Sbjct: 69 GYSIIEARDIDDAAEKAKGCPMLAMPNCNVEIAPI 103 # # # >SPAC23D3.13c # Length = 1616 # # Score = 28.9 bits (63), Expect = 2.2 # Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%) # # Query: 50 PTQATTSVRIADGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVEL 109 # PT S +I + NV++ D + +M E+ + +++ RCP AS # Sbjct: 1299 PTLICLSKKIFENAENVVENHSLDFLNRGTMQHMFESLLVPMRLKY--RCPKASRVNQST 1356 # # Query: 110 RPIWELA 116 # PIW LA # Sbjct: 1357 LPIWVLA 1363 # # # >BH2585 # Length = 416 # # Score = 28.1 bits (61), Expect = 3.4 # Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%) # # Query: 50 PTQATTSVRIADGKTNVIDGPYADTKEQLAGFYMIEAADIDTAIEWAARCPAASTGTVEL 109 # P TS+ + G V++ PYA + ++ A ++ A I A+E A C + GT+E # Sbjct: 51 PKWERTSLALQGGADLVVELPYAFSTQK-AEWFATGAVSILAALEADALCFGSEEGTIE- 108 # # Query: 110 RPIWELADYM 119 # P L +M # Sbjct: 109 -PFHRLYHFM 117 # # # >mll0395_1 # Length = 244 # # Score = 27.7 bits (60), Expect = 4.2 # Identities = 14/39 (35%), Positives = 21/39 (52%) # # Query: 2 RYMLMINNDESALAAMPVEKTQQMSAAYGAYTEALKKSG 40 # R + I +E AL A+PV T + +A G E + +SG # Sbjct: 129 RTISAIGENEGALPALPVADTLKRESAAGVVAETVSRSG 167 # # # >YPO0036 # Length = 693 # # Score = 27.3 bits (59), Expect = 5.5 # Identities = 17/66 (25%), Positives = 32/66 (47%) # # Query: 13 ALAAMPVEKTQQMSAAYGAYTEALKKSGAWLAGERLRPTQATTSVRIADGKTNVIDGPYA 72 # AL A +Q + + + E L S WLAG++ + +A G+ +++ G +A # Sbjct: 321 ALMAPTELLAEQHATTFRQWLEPLGFSVGWLAGKQKGKARLAQQEAVASGQVSMVIGTHA 380 # # Query: 73 DTKEQL 78 # +EQ+ # Sbjct: 381 MFQEQV 386 # # # >PA5084 # Length = 416 # # Score = 26.6 bits (57), Expect = 9.4 # Identities = 10/21 (47%), Positives = 12/21 (56%) # # Query: 85 EAADIDTAIEWAARCPAASTG 105 # + D D A+EWA PA TG # Sbjct: 339 QGGDFDAAVEWAGMRPATPTG 359 # # Database: myva Posted date: Sep 16, 2002 2:25 PM Number of letters in database: 59,019,183 Number of sequences in database: 192,987 Lambda K H 0.315 0.128 0.373 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,509,404 Number of Sequences: 192987 Number of extensions: 465691 Number of successful extensions: 1323 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 1301 Number of HSP's gapped (non-prelim): 39 length of query: 122 length of database: 59,019,183 effective HSP length: 98 effective length of query: 24 effective length of database: 40,106,457 effective search space: 962554968 effective search space used: 962554968 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 57 (26.6 bits) S2: 57 (26.6 bits)