proteins
| 8 proteins |
E | COG4816 | Ethanolamine utilization protein | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Escherichia coli K12 (Enterobacteriales | Gammaproteobacteria) | ||||
| eutL | ||||
219 letters 0
0 1103 = |||eutL (219) = 0
-1 603 = FN0081 (217) = -1
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= eutL
(219 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
eutL 429 e-120
Z3704 427 e-120
ECs3310 427 e-120
STM2456 409 e-114
FN0081 236 2e-62
lin1141 230 2e-60
STM2039 64 3e-10
lin1116 59 6e-09
CC0486 35 0.096
YER061c 34 0.21
STM2055 33 0.48
XF1312 32 1.1
SP2151 32 1.1
Rv1808 32 1.1
DR0773 31 1.8
DR2572 31 2.4
HI0696 30 4.0
MT1856.1 30 5.3
CC1908 29 9.0
CC1869 29 9.0
SA0375_3 29 9.0
# >eutL
# Length = 219
#
# Score = 429 bits (1103), Expect = e-120
# Identities = 219/219 (100%), Positives = 219/219 (100%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP
# Sbjct: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
#
#
# >Z3704
# Length = 219
#
# Score = 427 bits (1098), Expect = e-120
# Identities = 217/219 (99%), Positives = 218/219 (99%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAM+AHIENGAAFQWANDAQ
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAQ 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQL TYVPPP
# Sbjct: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
#
#
# >ECs3310
# Length = 219
#
# Score = 427 bits (1098), Expect = e-120
# Identities = 217/219 (99%), Positives = 218/219 (99%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAM+AHIENGAAFQWANDAQ
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAQ 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQL TYVPPP
# Sbjct: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
#
#
# >STM2456
# Length = 219
#
# Score = 409 bits (1050), Expect = e-114
# Identities = 206/219 (94%), Positives = 214/219 (97%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVN FARELKLPPHIRSLGLI+ADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNDGFARELKLPPHIRSLGLITADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAM+A IENGAAFQWANDA+
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVASIENGAAFQWANDAE 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# +TAFLAHVVSRTGSYLSSTAGI LGDPMAYLVAPPLEAT+GIDAA+KSADVQL TYVPPP
# Sbjct: 121 NTAFLAHVVSRTGSYLSSTAGIALGDPMAYLVAPPLEATFGIDAAMKSADVQLVTYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVL+IARNP+QRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLDIARNPVQRA 219
#
#
# >FN0081
# Length = 217
#
# Score = 236 bits (603), Expect = 2e-62
# Identities = 119/211 (56%), Positives = 154/211 (72%)
#
# Query: 5 DLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVV 64
# D +R SV ++++I +V+A A EL LP RS+G+I+ADSDDVTY A DEATK A V +V
# Sbjct: 4 DPLRASVLSVKLIPNVDAKMAEELNLPNGYRSIGIITADSDDVTYTALDEATKMAEVVIV 63
#
# Query: 65 YGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAF 124
# Y +S Y GAA+ + AGEV+ ++ GPNPAEV++GL+A I IENG F AN+ +
# Sbjct: 64 YAKSFYGGAANANTKLAGEVIGIMAGPNPAEVKSGLNAAIDFIENGGCFYSANEDDTIPY 123
#
# Query: 125 LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETN 184
# AH VSRTGSYLS TAG+ G +AYL+APPLEA Y +DAALK+ADV LA + PPSETN
# Sbjct: 124 YAHCVSRTGSYLSKTAGVEEGAALAYLIAPPLEAMYALDAALKAADVTLAAFFGPPSETN 183
#
# Query: 185 YSAAFLTGSQAACKAACNAFTDAVLEIARNP 215
# + LTGSQ+ACK+AC+AF +AV +A+NP
# Sbjct: 184 FGGGLLTGSQSACKSACDAFAEAVKFVAQNP 214
#
#
# >lin1141
# Length = 217
#
# Score = 230 bits (587), Expect = 2e-60
# Identities = 113/213 (53%), Positives = 154/213 (72%)
#
# Query: 5 DLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVV 64
# D + SV +++V+++V+ ++L L PH RSLG+I++D DDVTY A DEATK A V+VV
# Sbjct: 4 DKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCDDVTYTALDEATKAAEVDVV 63
#
# Query: 65 YGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAF 124
# Y +S+YAGA + + AGEV+ ++ GP+PAEV++GL + IENGA+F AN+ +
# Sbjct: 64 YAKSMYAGAGNASTKLAGEVIGIIAGPSPAEVKSGLSVAVDFIENGASFVSANEDDSVPY 123
#
# Query: 125 LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETN 184
# AH VSRTGS+LS A + G +AYL+APPLEA Y +DAALK+ADV + T+ PPSETN
# Sbjct: 124 FAHCVSRTGSFLSKEANVAEGQAIAYLIAPPLEAMYALDAALKAADVAIGTFYGPPSETN 183
#
# Query: 185 YSAAFLTGSQAACKAACNAFTDAVLEIARNPIQ 217
# + A LTGSQ+ACKAAC+AF AV +A NP+Q
# Sbjct: 184 FGGALLTGSQSACKAACDAFKMAVENVAENPLQ 216
#
#
# >STM2039
# Length = 233
#
# Score = 63.5 bits (153), Expect = 3e-10
# Identities = 53/178 (29%), Positives = 83/178 (45%), Gaps = 18/178 (10%)
#
# Query: 16 VIASVNADFARELKLPPHIRSLGLISADSDDVTYI-AADEATKQAMVEVV---YGRSLYA 71
# VIA+V+ +KL RS+G++ A + +I AADEA K EVV R
# Sbjct: 23 VIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKG 82
#
# Query: 72 GAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSR 131
# GA HG LI+LGG + ++V+ G++ + ++ + N+A +R
# Sbjct: 83 GAGHGS-------LIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIEL--QYTAR 133
#
# Query: 132 TGSYLSSTAGITLGDPMAYLVAPPLEATYGI---DAALKSADVQLATYVPPPSETNYS 186
# L G +G +V P A+ G+ D ALKSA+V++ Y P T++S
# Sbjct: 134 ASYALEKAFGAPIGRACGIIVGAP--ASVGVLMADTALKSANVEVVAYSSPAHGTSFS 189
#
#
# >lin1116
# Length = 267
#
# Score = 59.3 bits (142), Expect = 6e-09
# Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
#
# Query: 16 VIASVNADFARELKLPPHIRSLGLISADSDDVTYI-AADEATKQAMVEVV---YGRSLYA 71
# VIA+V+ +KL RS+G++ A + +I AADEA K EVV R
# Sbjct: 57 VIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKG 116
#
# Query: 72 GAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSR 131
# GA HG LI+ GG + ++V+ ++ + ++ + N+A +R
# Sbjct: 117 GAGHGS-------LIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIEL--QYTAR 167
#
# Query: 132 TGSYLSSTAGITLGDPMAYLVAPPLEATYGI---DAALKSADVQLATYVPPPSETNYS 186
# L++ G +G +V P A G+ D A+KSA+V + Y P T++S
# Sbjct: 168 ASHALNTAFGAPVGKAFGLMVGAP--AGIGVVMADTAVKSANVDVVAYSSPADGTSFS 223
#
#
# >CC0486
# Length = 358
#
# Score = 35.4 bits (80), Expect = 0.096
# Identities = 44/163 (26%), Positives = 65/163 (38%), Gaps = 23/163 (14%)
#
# Query: 47 VTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAH 106
# V +AA+ A +Q MV ++ YA G AG ++ +GG D +
# Sbjct: 116 VREVAANPAQRQEMVNNIFSNPSYATMFKGADSAAGLIIDTIGG----------DGLKLF 165
#
# Query: 107 IENGAAFQWANDAQDTAF-LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAA 165
# + A Q A D Q + + A VV R G L+ST ++ +P L + + A
# Sbjct: 166 MAGKAVKQAAYDVQKSTWSKATVVDRDGR-LASTKSLS--------TSPALAESADV-AV 215
#
# Query: 166 LKSADV--QLATYVPPPSETNYSAAFLTGSQAACKAACNAFTD 206
# L+ A Q P +E YS + G A AA A D
# Sbjct: 216 LQQASTGGQSLGLTPRAAEAPYSPVVVRGLAVAALAALGAAGD 258
#
#
# >YER061c
# Length = 442
#
# Score = 34.3 bits (77), Expect = 0.21
# Identities = 24/88 (27%), Positives = 38/88 (42%), Gaps = 10/88 (11%)
#
# Query: 125 LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLE---ATYGIDAALKSADVQLATYVPPPS 181
# L H R + +S G L ++ +PP + A I+ ALK A ++ P+
# Sbjct: 262 LEHAQKRNANIISELVGYGLSSDACHITSPPADGNGAKRAIEMALKMARLE-------PT 314
#
# Query: 182 ETNYSAAFLTGSQAACKAACNAFTDAVL 209
# + +Y A T + KA C A A+L
# Sbjct: 315 DVDYVNAHATSTLLGDKAECLAVASALL 342
#
#
# >STM2055
# Length = 116
#
# Score = 33.1 bits (74), Expect = 0.48
# Identities = 16/53 (30%), Positives = 29/53 (54%)
#
# Query: 11 VTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEV 63
# VT +IA+ D ++L L + ++G+++ + + IA D ATK VE+
# Sbjct: 20 VTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEI 72
#
#
# >XF1312
# Length = 694
#
# Score = 32.0 bits (71), Expect = 1.1
# Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
#
# Query: 34 IRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPN 92
# IRSLG ++A + ++ D ++AMV +G+ Y GAA P +GE+L M+ P+
# Sbjct: 239 IRSLGRVTAQAGADLRLSIDADLQRAMV-AAFGQ--YEGAAVAMDPRSGEILGMVSLPS 294
#
#
# >SP2151
# Length = 315
#
# Score = 32.0 bits (71), Expect = 1.1
# Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
#
# Query: 75 HGPSPTAGEVLIM-LGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTG 133
# HG P G +L+ L + LD+++A E F W +A A L + +
# Sbjct: 50 HGNGPQVGNLLLQHLASDSEKNPAFPLDSLVAMTEGSIGF-WLKNALQNALLDEGIEKNV 108
#
# Query: 134 SYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATY 176
# + + + + DP ++ P+ Y + A A+ AT+
# Sbjct: 109 ASVVTQVVVDKNDPAFVNLSKPIGPFYSEEEAKAEAEKSGATF 151
#
#
# >Rv1808
# Length = 409
#
# Score = 32.0 bits (71), Expect = 1.1
# Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 31/207 (14%)
#
# Query: 30 LPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLG 89
# LPP I S G + A +AA A E LY+ AA S G +
# Sbjct: 6 LPPEINS-GRMYAGPGSGPLLAAAAAWDALAAE------LYSAAASYGSTIEGLTVAPWM 58
#
# Query: 90 GPNPAEVRAGLDAMIAHI--------ENGAAFQWANDAQDTAFLAHV------------- 128
# GP+ + A + +A I + GA + A +TAF A V
# Sbjct: 59 GPSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVYETAFAATVPPPVIEANRALLM 118
#
# Query: 129 -VSRTGSYLSSTAGITLGDP-MAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETNYS 186
# + T + +T I + A + A A YG + +A QLA + PP TN S
# Sbjct: 119 SLVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGSSATAS-QLAPFSEPPQTTNPS 177
#
# Query: 187 AAFLTGSQAACKAACNAFTDAVLEIAR 213
# A + A A A +D ++++
# Sbjct: 178 ATAAQSAVVAQAAGAAASSDITAQLSQ 204
#
#
# >DR0773
# Length = 635
#
# Score = 31.2 bits (69), Expect = 1.8
# Identities = 32/113 (28%), Positives = 43/113 (37%), Gaps = 12/113 (10%)
#
# Query: 73 AAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRT 132
# AA P L+ G + A +G A G A Q NDA TA L +++
# Sbjct: 478 AARVPQANTVPELVAQAGTSAAPATSGASA-----GTGTAGQAGNDAAGTAALPPLITAV 532
#
# Query: 133 GSYL--SSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSET 183
# GS +STA G P A +D L V L++ V P+ T
# Sbjct: 533 GSEAAPASTATADAGSS-----TPAAPAATALDRLLAPGQVALSSVVLGPTNT 580
#
#
# >DR2572
# Length = 496
#
# Score = 30.8 bits (68), Expect = 2.4
# Identities = 35/114 (30%), Positives = 55/114 (47%), Gaps = 15/114 (13%)
#
# Query: 87 MLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAH-VVSRTGSYLSSTAGITLG 145
# +L GPNP R+ DA++A + G A + LAH + + T S ++S+A
# Sbjct: 64 LLTGPNPPAPRSVADAVLADLRLGKQLTAPTLAPE---LAHQLAAETSSEIASSA----- 115
#
# Query: 146 DPMAYLVAPPLEATYGIDAALKSADVQLATYV---PPPSETNYSAAFLTGSQAA 196
# + ++APP A AA S D+ LA + P PS + + A L+ +AA
# Sbjct: 116 -TLRGVLAPP--ALPRSLAASVSQDIALARQLGAAPLPSVASVAPAVLSDLRAA 166
#
#
# >HI0696
# Length = 1298
#
# Score = 30.0 bits (66), Expect = 4.0
# Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
#
# Query: 14 MRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATK-QAMVEVVYGRSLYAG 72
# + + A N + + K+ +R +G+ ADS +VT + + QA+ ++ GRSL +
# Sbjct: 1136 LNIEAIRNPETMEDSKITAGVRVIGI--ADSPEVTIFSEPSKPQDQALSYLLTGRSLESS 1193
#
# Query: 73 AAHGPSPTAGEVLIMLG 89
# G + + G LI LG
# Sbjct: 1194 GEVGSTGSVGAALIGLG 1210
#
#
# >MT1856.1
# Length = 386
#
# Score = 29.6 bits (65), Expect = 5.3
# Identities = 41/168 (24%), Positives = 64/168 (37%), Gaps = 24/168 (14%)
#
# Query: 69 LYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHI--------ENGAAFQWANDAQ 120
# LY+ AA S G + GP+ + A + +A I + GA + A
# Sbjct: 15 LYSAAASYGSTIEGLTVAPWMGPSSITMAAAVAPYVAWISVTAGQAEQAGAQAKIAAGVY 74
#
# Query: 121 DTAFLAHV--------------VSRTGSYLSSTAGITLGDP-MAYLVAPPLEATYGIDAA 165
# +TAF A V + T + +T I + A + A A YG +
# Sbjct: 75 ETAFAATVPPPVIEANRALLMSLVATNIFGQNTPAIAATEAHYAEMWAQDAAAMYGYAGS 134
#
# Query: 166 LKSADVQLATYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIAR 213
# +A QLA + PP TN SA + A A A +D ++++
# Sbjct: 135 SATAS-QLAPFSEPPQTTNPSATAAQSAVVAQAAGAAASSDITAQLSQ 181
#
#
# >CC1908
# Length = 589
#
# Score = 28.9 bits (63), Expect = 9.0
# Identities = 39/156 (25%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
#
# Query: 41 SADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPN-PAEVRAG 99
# SA S T A + AM E V ++ G +P +V M+ P+ P EVR
# Sbjct: 92 SAPSRPPTETRTTRAVRLAMAEAVPRQA-------GLAPLMADVQAMVDRPDAPPEVRDA 144
#
# Query: 100 LDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEAT 159
# A+++ D L V R+G L + P A APP+ A
# Sbjct: 145 GRALLSTTPT------IPDITTAPGLRRAVERSGVLLEAHLARAAAPPSAVGAAPPMVAE 198
#
# Query: 160 YGIDAALKSADVQLATYVPPPSETNYSAAFLTGSQA 195
# + AAL L+ ++ ++ + A GS A
# Sbjct: 199 GDLKAALWVLRSALSAWLAKAEVSSGAVAPHVGSVA 234
#
#
# >CC1869
# Length = 386
#
# Score = 28.9 bits (63), Expect = 9.0
# Identities = 29/118 (24%), Positives = 51/118 (42%), Gaps = 6/118 (5%)
#
# Query: 32 PHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGP 91
# P +SL V +++A++A +V A A G +P+A LI+ GG
# Sbjct: 259 PAPKSLDRYDFSLTPVDHLSAEDAAA-TLVAFTAEAVFKAFAQSGEAPSA---LIVCGGG 314
#
# Query: 92 --NPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDP 147
# NPA ++ +++ A+ W D+ + A++ +RT L + T G P
# Sbjct: 315 RHNPAIMQTLAARAPVPVKSAEAYGWRGDSIEAEAFAYLAARTAKGLPISFPGTTGVP 372
#
#
# >SA0375_3
# Length = 284
#
# Score = 28.9 bits (63), Expect = 9.0
# Identities = 24/81 (29%), Positives = 39/81 (47%), Gaps = 12/81 (14%)
#
# Query: 26 RELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVL 85
# R+ K+ + SLG + S+D Y D+A K+ + E + GR+ Y GA +
# Sbjct: 178 RQYKVYRGMGSLGAMEKGSND-RYFQEDKAPKKFVPEGIEGRTAYKGALQ------DTIY 230
#
# Query: 86 IMLGGPNPAEVRAGLDAMIAH 106
# ++GG VRAG+ +H
# Sbjct: 231 QLMGG-----VRAGMGYTGSH 246
#
#
Database: myva
Posted date: Sep 17, 2002 10:27 AM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.317 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,368,385
Number of Sequences: 192987
Number of extensions: 903696
Number of successful extensions: 2669
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2657
Number of HSP's gapped (non-prelim): 31
length of query: 219
length of database: 59,019,183
effective HSP length: 105
effective length of query: 114
effective length of database: 38,755,548
effective search space: 4418132472
effective search space used: 4418132472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
S2: 63 (28.9 bits)