proteins
| 8 proteins |
E | COG4816 | Ethanolamine utilization protein | Help | |
|---|---|---|---|---|---|
| 1 from | query genome Escherichia coli K12 (Enterobacteriales | Gammaproteobacteria) | ||||
| eutL | ||||
219 letters (r) 0
0 965 = ||| 1 ECs3310 (219) = 0
-1 517 = 3 FN0081 (217) = -1
7
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= eutL
(219 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
ECs3310 376 e-104
Z3704 376 e-104
eutL 375 e-104
STM2456 359 3e-99
FN0081 203 2e-52
lin1141 197 1e-50
STM2039 55 1e-07
lin1116 54 2e-07
YER061c 33 0.48
XF1312 32 1.4
STM2055 31 2.7
HI0696 30 4.6
mll9338 29 9.0
# >ECs3310
# Length = 219
#
# Score = 376 bits (965), Expect = e-104
# Identities = 217/219 (99%), Positives = 218/219 (99%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAM+AHIENGAAFQWANDAQ
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAQ 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQL TYVPPP
# Sbjct: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
#
#
# >Z3704
# Length = 219
#
# Score = 376 bits (965), Expect = e-104
# Identities = 217/219 (99%), Positives = 218/219 (99%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAM+AHIENGAAFQWANDAQ
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVAHIENGAAFQWANDAQ 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQL TYVPPP
# Sbjct: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLVTYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
#
#
# >eutL
# Length = 219
#
# Score = 375 bits (964), Expect = e-104
# Identities = 219/219 (100%), Positives = 219/219 (100%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP
# Sbjct: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
#
#
# >STM2456
# Length = 219
#
# Score = 359 bits (921), Expect = 3e-99
# Identities = 206/219 (94%), Positives = 214/219 (97%)
#
# Query: 1 MPALDLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAM 60
# MPALDLIRPSVTAMRVIASVN FARELKLPPHIRSLGLI+ADSDDVTYIAADEATKQAM
# Sbjct: 1 MPALDLIRPSVTAMRVIASVNDGFARELKLPPHIRSLGLITADSDDVTYIAADEATKQAM 60
#
# Query: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQ 120
# VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAM+A IENGAAFQWANDA+
# Sbjct: 61 VEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMVASIENGAAFQWANDAE 120
#
# Query: 121 DTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPP 180
# +TAFLAHVVSRTGSYLSSTAGI LGDPMAYLVAPPLEAT+GIDAA+KSADVQL TYVPPP
# Sbjct: 121 NTAFLAHVVSRTGSYLSSTAGIALGDPMAYLVAPPLEATFGIDAAMKSADVQLVTYVPPP 180
#
# Query: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQRA 219
# SETNYSAAFLTGSQAACKAACNAFTDAVL+IARNP+QRA
# Sbjct: 181 SETNYSAAFLTGSQAACKAACNAFTDAVLDIARNPVQRA 219
#
#
# >FN0081
# Length = 217
#
# Score = 203 bits (517), Expect = 2e-52
# Identities = 119/211 (56%), Positives = 154/211 (72%)
#
# Query: 5 DLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVV 64
# D +R SV ++++I +V+A A EL LP RS+G+I+ADSDDVTY A DEATK A V +V
# Sbjct: 4 DPLRASVLSVKLIPNVDAKMAEELNLPNGYRSIGIITADSDDVTYTALDEATKMAEVVIV 63
#
# Query: 65 YGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAF 124
# Y +S Y GAA+ + AGEV+ ++ GPNPAEV++GL+A I IENG F AN+ +
# Sbjct: 64 YAKSFYGGAANANTKLAGEVIGIMAGPNPAEVKSGLNAAIDFIENGGCFYSANEDDTIPY 123
#
# Query: 125 LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETN 184
# AH VSRTGSYLS TAG+ G +AYL+APPLEA Y +DAALK+ADV LA + PPSETN
# Sbjct: 124 YAHCVSRTGSYLSKTAGVEEGAALAYLIAPPLEAMYALDAALKAADVTLAAFFGPPSETN 183
#
# Query: 185 YSAAFLTGSQAACKAACNAFTDAVLEIARNP 215
# + LTGSQ+ACK+AC+AF +AV +A+NP
# Sbjct: 184 FGGGLLTGSQSACKSACDAFAEAVKFVAQNP 214
#
#
# >lin1141
# Length = 217
#
# Score = 197 bits (502), Expect = 1e-50
# Identities = 113/213 (53%), Positives = 154/213 (72%)
#
# Query: 5 DLIRPSVTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEVV 64
# D + SV +++V+++V+ ++L L PH RSLG+I++D DDVTY A DEATK A V+VV
# Sbjct: 4 DKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCDDVTYTALDEATKAAEVDVV 63
#
# Query: 65 YGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAF 124
# Y +S+YAGA + + AGEV+ ++ GP+PAEV++GL + IENGA+F AN+ +
# Sbjct: 64 YAKSMYAGAGNASTKLAGEVIGIIAGPSPAEVKSGLSVAVDFIENGASFVSANEDDSVPY 123
#
# Query: 125 LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATYGIDAALKSADVQLATYVPPPSETN 184
# AH VSRTGS+LS A + G +AYL+APPLEA Y +DAALK+ADV + T+ PPSETN
# Sbjct: 124 FAHCVSRTGSFLSKEANVAEGQAIAYLIAPPLEAMYALDAALKAADVAIGTFYGPPSETN 183
#
# Query: 185 YSAAFLTGSQAACKAACNAFTDAVLEIARNPIQ 217
# + A LTGSQ+ACKAAC+AF AV +A NP+Q
# Sbjct: 184 FGGALLTGSQSACKAACDAFKMAVENVAENPLQ 216
#
#
# >STM2039
# Length = 233
#
# Score = 55.5 bits (132), Expect = 1e-07
# Identities = 53/178 (29%), Positives = 83/178 (45%), Gaps = 18/178 (10%)
#
# Query: 16 VIASVNADFARELKLPPHIRSLGLISADSDDVTYI-AADEATKQAMVEVV---YGRSLYA 71
# VIA+V+ +KL RS+G++ A + +I AADEA K EVV R
# Sbjct: 23 VIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKG 82
#
# Query: 72 GAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSR 131
# GA HG LI+LGG + ++V+ G++ + ++ + N+A +R
# Sbjct: 83 GAGHGS-------LIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIEL--QYTAR 133
#
# Query: 132 TGSYLSSTAGITLGDPMAYLVAPPLEATYGI---DAALKSADVQLATYVPPPSETNYS 186
# L G +G +V P A+ G+ D ALKSA+V++ Y P T++S
# Sbjct: 134 ASYALEKAFGAPIGRACGIIVGAP--ASVGVLMADTALKSANVEVVAYSSPAHGTSFS 189
#
#
# >lin1116
# Length = 267
#
# Score = 54.3 bits (129), Expect = 2e-07
# Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
#
# Query: 16 VIASVNADFARELKLPPHIRSLGLISADSDDVTYI-AADEATKQAMVEVV---YGRSLYA 71
# VIA+V+ +KL RS+G++ A + +I AADEA K EVV R
# Sbjct: 57 VIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKG 116
#
# Query: 72 GAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGAAFQWANDAQDTAFLAHVVSR 131
# GA HG LI+ GG + ++V+ ++ + ++ + N+A +R
# Sbjct: 117 GAGHGS-------LIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHIEL--QYTAR 167
#
# Query: 132 TGSYLSSTAGITLGDPMAYLVAPPLEATYGI---DAALKSADVQLATYVPPPSETNYS 186
# L++ G +G +V P A G+ D A+KSA+V + Y P T++S
# Sbjct: 168 ASHALNTAFGAPVGKAFGLMVGAP--AGIGVVMADTAVKSANVDVVAYSSPADGTSFS 223
#
#
# >YER061c
# Length = 442
#
# Score = 33.1 bits (74), Expect = 0.48
# Identities = 24/88 (27%), Positives = 38/88 (42%), Gaps = 10/88 (11%)
#
# Query: 125 LAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLE---ATYGIDAALKSADVQLATYVPPPS 181
# L H R + +S G L ++ +PP + A I+ ALK A ++ P+
# Sbjct: 262 LEHAQKRNANIISELVGYGLSSDACHITSPPADGNGAKRAIEMALKMARLE-------PT 314
#
# Query: 182 ETNYSAAFLTGSQAACKAACNAFTDAVL 209
# + +Y A T + KA C A A+L
# Sbjct: 315 DVDYVNAHATSTLLGDKAECLAVASALL 342
#
#
# >XF1312
# Length = 694
#
# Score = 31.6 bits (70), Expect = 1.4
# Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
#
# Query: 34 IRSLGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPN 92
# IRSLG ++A + ++ D ++AMV +G+ Y GAA P +GE+L M+ P+
# Sbjct: 239 IRSLGRVTAQAGADLRLSIDADLQRAMV-AAFGQ--YEGAAVAMDPRSGEILGMVSLPS 294
#
#
# >STM2055
# Length = 116
#
# Score = 30.8 bits (68), Expect = 2.7
# Identities = 16/53 (30%), Positives = 29/53 (54%)
#
# Query: 11 VTAMRVIASVNADFARELKLPPHIRSLGLISADSDDVTYIAADEATKQAMVEV 63
# VT +IA+ D ++L L + ++G+++ + + IA D ATK VE+
# Sbjct: 20 VTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEI 72
#
#
# >HI0696
# Length = 1298
#
# Score = 30.0 bits (66), Expect = 4.6
# Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
#
# Query: 14 MRVIASVNADFARELKLPPHIRSLGLISADSDDVT-YIAADEATKQAMVEVVYGRSLYAG 72
# + + A N + + K+ +R +G+ ADS +VT + + QA+ ++ GRSL +
# Sbjct: 1136 LNIEAIRNPETMEDSKITAGVRVIGI--ADSPEVTIFSEPSKPQDQALSYLLTGRSLESS 1193
#
# Query: 73 AAHGPSPTAGEVLIMLG 89
# G + + G LI LG
# Sbjct: 1194 GEVGSTGSVGAALIGLG 1210
#
#
# >mll9338
# Length = 299
#
# Score = 28.9 bits (63), Expect = 9.0
# Identities = 23/66 (34%), Positives = 30/66 (44%), Gaps = 1/66 (1%)
#
# Query: 37 LGLISADSDDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEV 96
# LG ++A VT A D A A +E + +LYA G SP L +LGG +
# Sbjct: 193 LGTVTATRICVTEAAID-AMSLAAIERIRRDTLYASTGGGWSPATDTALRLLGGRPNTRL 251
#
# Query: 97 RAGLDA 102
# A DA
# Sbjct: 252 VAATDA 257
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.317 0.131 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,368,385
Number of Sequences: 192987
Number of extensions: 903696
Number of successful extensions: 2669
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2657
Number of HSP's gapped (non-prelim): 31
length of query: 219
length of database: 59,019,183
effective HSP length: 105
effective length of query: 114
effective length of database: 38,755,548
effective search space: 4418132472
effective search space used: 4418132472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
S2: 63 (28.9 bits)