Vibrio cholerae O1 biovar eltor str. N16961 chromosome II

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220303-220402 (1-100) 220403-220502 (101-200) 220503-220602 (201-300) 220603-220702 (301-400) 220703-220802 (401-500)
[220803-220902 (501-600)] 220903-221002 (601-700) 221003-221102 (701-800) 221103-221202 (801-900) 221203-221302 (901-1000)
221303-221395 (1001-1093)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220803 hypothetical VCA0511 anaerobic ribonucleoside triphosphate reductase
Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
genbank 15601271 NP_232902.1 706 440291 442411
220804 hypothetical VCA0512 anaerobic ribonucleoside-triphosphate reductase activating protein
similar to GB:L42023 SP:P45080 PID:1006501 PID:1221278 PID:1205400; identified by sequence similarity; putative
genbank 15601272 NP_232903.1 155 442416 442883
220805 hypothetical VCA0513 aspartate aminotransferase
catalyzes the formation of L-glutamate and oxaloacetate from L-aspartate and 2-oxoglutarate
genbank 15601273 NP_232904.1 404 442972 444186
220806 hypothetical VCA0514 hypothetical protein
identified by Glimmer2; putative
genbank 15601274 NP_232905.1 227 444244 444927
220807 hypothetical VCA0515 hypothetical protein
identified by Glimmer2; putative
genbank 15601275 NP_232906.1 38 445007 445123
220808 hypothetical VCA0516 PTS system, fructose-specific IIBC component
similar to SP:P20966 GB:M23196 PID:405893 PID:450372 GB:U00096; identified by sequence similarity; putative
genbank 15601276 NP_232907.1 580 445161 446903
220809 hypothetical VCA0517 1-phosphofructokinase
similar to SP:P23539 GB:X53948 PID:405894 PID:41487 GB:U00096; identified by sequence similarity; putative
genbank 15601277 NP_232908.1 317 446916 447869
220810 hypothetical VCA0518 PTS system, fructose-specific IIA/FPR component
similar to PID:619247 SP:P24217 GB:U00096 PID:1736835 PID:1788494; identified by sequence similarity; putative
genbank 15601278 NP_232909.1 400 447880 449082
220811 hypothetical VCA0519 fructose repressor
similar to SP:P21930 PID:581763; identified by sequence similarity; putative
genbank 15601279 NP_232910.1 326 449421 450401
220812 hypothetical VCA0520 exonuclease SbcD, putative
similar to GB:AE000520; identified by sequence similarity; putative
genbank 15601280 NP_232911.1 379 450455 451594
220813 hypothetical VCA0521 exonuclease SbcC, putative
similar to GB:AE000520; identified by sequence similarity; putative
genbank 15601281 NP_232912.1 1013 451596 454637
220814 hypothetical VCA0522 sensor histidine kinase/response regulator LuxN
similar to PID:1653075; identified by sequence similarity; putative
genbank 15601282 NP_232913.1 686 454734 456794
220815 hypothetical VCA0523 hypothetical protein
similar to GB:L42023 SP:P44422 PID:1007761 PID:1221700 PID:1205788; identified by sequence similarity; putative
genbank 15601283 NP_232914.1 389 457023 458192
220816 hypothetical VCA0524 hypothetical protein
identified by Glimmer2; putative
genbank 15601284 NP_232915.1 320 458389 459351
220817 hypothetical VCA0525 hypothetical protein
identified by Glimmer2; putative
genbank 15601285 NP_232916.1 34 459328 459432
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220818 hypothetical VCA0526 chloride channel protein
Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation
genbank 15601286 NP_232917.1 468 459498 460904
220819 hypothetical VCA0527 hypothetical protein
identified by Glimmer2; putative
genbank 15601287 NP_232918.1 329 461371 462360
220820 hypothetical VCA0528 hypothetical protein
identified by Glimmer2; putative
genbank 15601288 NP_232919.1 314 462424 463368
220821 hypothetical VCA0529 potassium uptake protein, Kup system
similar to SP:P30016 GB:X68551 PID:41888 PID:290597 GB:U00096; identified by sequence similarity; putative
genbank 15601289 NP_232920.1 620 463691 465553
220822 hypothetical VCA0530 pyruvate-flavoredoxin oxidoreductase
similar to GB:U00096 PID:1742250 PID:1742256 PID:1787642; identified by sequence similarity; putative
genbank 15601290 NP_232921.1 1079 465651 468890
220823 hypothetical VCA0531 sensor histidine kinase
similar to GB:M36066 SP:P21865 PID:146551 GB:U00096 PID:1651302; identified by sequence similarity; putative
genbank 15601291 NP_232922.1 497 468993 470486
220824 hypothetical VCA0532 DNA-binding response regulator
similar to GB:U00096 PID:1651301 PID:1786911; identified by sequence similarity; putative
genbank 15601292 NP_232923.1 230 470476 471168
220825 hypothetical VCA0533 tatA protein
similar to GB:M87049 SP:P27856 PID:148236 GB:U00096 PID:2367310; identified by sequence similarity; putative
genbank 15601293 NP_232924.1 78 471368 471604
220826 hypothetical VCA0535 hypothetical protein
identified by Glimmer2; putative
genbank 15601294 NP_232925.1 126 472658 473038
220827 hypothetical VCA0536 hypothetical protein
identified by Glimmer2; putative
genbank 15601295 NP_232926.1 288 473172 474038
220828 hypothetical VCA0537 hypothetical protein
identified by Glimmer2; putative
genbank 15601296 NP_232927.1 167 474496 474999
220829 hypothetical VCA0538 cytochrome b561, putative
similar to PID:1236738 GB:U00096 PID:1787296; identified by sequence similarity; putative
genbank 15601297 NP_232928.1 181 475386 475931
220830 hypothetical VCA0539 hypothetical protein
identified by Glimmer2; putative
genbank 15601298 NP_232929.1 189 475928 476497
220831 hypothetical VCA0540 formate transporter 1, putative
similar to SP:P21501 PID:147154 GB:U00096 PID:1651428 PID:1651435; identified by sequence similarity; putative
genbank 15601299 NP_232930.1 483 476605 478056
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220832 hypothetical VCA0541 hypothetical protein
identified by Glimmer2; putative
genbank 15601300 NP_232931.1 31 478160 478255
220833 hypothetical VCA0542 transcriptional regulator, LysR family
similar to SP:P32484 PID:405876 PID:466777 GB:U00096 PID:1788481; identified by sequence similarity; putative
genbank 15601301 NP_232932.1 301 478273 479178
220834 hypothetical VCA0543 hypothetical protein
identified by Glimmer2; putative
genbank 15601302 NP_232933.1 170 479340 479852
220835 hypothetical VCA0544 hypothetical protein
identified by Glimmer2; putative
genbank 15601303 NP_232934.1 554 480084 481748
220836 hypothetical VCA0545 5`-nucleotidase, putative
similar to GB:AE000520; identified by sequence similarity; putative
genbank 15601304 NP_232935.1 580 481978 483720
220837 hypothetical VCA0546 hypothetical protein
identified by Glimmer2; putative
genbank 15601305 NP_232936.1 318 484280 485236
220838 hypothetical VCA0547 hypothetical protein
identified by Glimmer2; putative
genbank 15601306 NP_232937.1 62 485540 485728
220839 hypothetical VCA0548 hypothetical protein
identified by Glimmer2; putative
genbank 15601307 NP_232938.1 49 485757 485906
220840 hypothetical VCA0549 phnA protein
similar to SP:P16680 GB:U14003 PID:147194 PID:536952 GB:U00096; identified by sequence similarity; putative
genbank 15601308 NP_232939.1 191 485878 486453
220841 hypothetical VCA0550 hypothetical protein
identified by Glimmer2; putative
genbank 15601309 NP_232940.1 360 486637 487719
220842 hypothetical VCA0551 hypothetical protein
identified by Glimmer2; putative
genbank 15601310 NP_232941.1 76 487773 488003
220843 hypothetical VCA0552 fatty acid cis/trans isomerase
similar to GP:2612821; identified by sequence similarity; putative
genbank 15601311 NP_232942.1 766 488171 490471
220844 hypothetical VCA0553 hypothetical protein
identified by Glimmer2; putative
genbank 15601312 NP_232943.1 57 490560 490733
220845 hypothetical VCA0554 oxalate/formate antiporter, putative
similar to GB:AE000782; identified by sequence similarity; putative
genbank 15601313 NP_232944.1 410 490884 492116
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220846 hypothetical VCA0555 hypothetical protein
identified by Glimmer2; putative
genbank 15601314 NP_232945.1 39 492174 492293
220847 hypothetical VCA0556 hypothetical protein
identified by Glimmer2; putative
genbank 15601315 NP_232946.1 184 492527 493081
220848 hypothetical VCA0557 GGDEF family protein
similar to GB:U00096 SP:P75908 PID:1787262; identified by sequence similarity; putative
genbank 15601316 NP_232947.1 469 493351 494760
220849 hypothetical VCA0558 gamma-glutamyltranspeptidase, putative
similar to GB:AL009126; identified by sequence similarity; putative
genbank 15601317 NP_232948.1 522 495055 496623
220850 hypothetical VCA0559 hypothetical protein
identified by Glimmer2; putative
genbank 15601318 NP_232949.1 327 496698 497681
220851 hypothetical VCA0560 GGDEF family protein
similar to GP:3392922; identified by sequence similarity; putative
genbank 15601319 NP_232950.1 412 497678 498916
220852 hypothetical VCA0561 hypothetical protein
identified by Glimmer2; putative
genbank 15601320 NP_232951.1 124 499272 499646
220853 hypothetical VCA0562 hypothetical protein
identified by Glimmer2; putative
genbank 15601321 NP_232952.1 92 499656 499934
220854 pntA hypothetical VCA0563 NAD(P) transhydrogenase subunit alpha
forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from
genbank 15601322 NP_232953.1 512 500227 501765
220855 pntB hypothetical VCA0564 pyridine nucleotide transhydrogenase
catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-ster
genbank 15601323 NP_232954.1 458 501777 503153
220856 hypothetical VCA0565 sensor histidine kinase
similar to GB:AE000511 PID:2313251; identified by sequence similarity; putative
genbank 15601324 NP_232955.1 499 503254 504753
220857 hypothetical VCA0566 transcriptional regulator
similar to SP:Q11156 PID:1449289 PID:2190480 GB:AL123456; identified by sequence similarity; putative
genbank 15601325 NP_232956.1 245 504647 505384
220858 hypothetical VCA0567 hypothetical protein
identified by Glimmer2; putative
genbank 15601326 NP_232957.1 296 505381 506271
220859 hypothetical VCA0568 hypothetical protein
identified by Glimmer2; putative
genbank 15601327 NP_232958.1 388 506332 507498
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220860 hypothetical VCA0569 hypothetical protein
identified by Glimmer2; putative
genbank 15601328 NP_232959.1 53 507539 507700
220861 hypothetical VCA0570 hypothetical protein
similar to GB:L42023 SP:P45116 PID:1007124 PID:1221351 PID:1205466; identified by sequence similarity; putative
genbank 15601329 NP_232960.1 103 508285 508596
220862 hypothetical VCA0571 hypothetical protein
identified by Glimmer2; putative
genbank 15601330 NP_232961.1 127 508604 508987
220863 ddl hypothetical VCA0572 D-alanylalanine synthetase
D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
genbank 15601331 NP_232962.1 334 509159 510163
220864 hypothetical VCA0573 DamX-related protein
similar to SP:P11557 GB:Z19601 PID:41226 PID:43274 PID:606322; identified by sequence similarity; putative
genbank 15601332 NP_232963.1 195 510314 510901
220865 hypothetical VCA0574 hypothetical protein
identified by Glimmer2; putative
genbank 15601333 NP_232964.1 893 511108 513789
220866 hypothetical VCA0575 transcriptional regulator, LysR family
similar to SP:P42623 PID:606046 GB:U00096 PID:1789492; identified by sequence similarity; putative
genbank 15601334 NP_232965.1 295 513839 514726
220867 hypothetical VCA0576 heme transport protein HutA
similar to GB:L27149 PID:529727; identified by sequence similarity; putative
genbank 15601335 NP_232966.1 698 514944 517040
220868 hypothetical VCA0577 hypothetical protein
identified by Glimmer2; putative
genbank 15601336 NP_232967.1 35 517156 517263
220869 hypothetical VCA0578 hypothetical protein
identified by Glimmer2; putative
genbank 15601337 NP_232968.1 565 517364 519061
220870 hypothetical VCA0579 hypothetical protein
identified by Glimmer2; putative
genbank 15601338 NP_232969.1 77 519142 519375
220871 hypothetical VCA0580 hypothetical protein
identified by Glimmer2; putative
genbank 15601339 NP_232970.1 195 519376 519963
220872 hypothetical VCA0581 hypothetical protein
identified by Glimmer2; putative
genbank 15601340 NP_232971.1 263 519996 520787
220873 hypothetical VCA0582 hypothetical protein
identified by Glimmer2; putative
genbank 15601341 NP_232972.1 160 520899 521381
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220874 hypothetical VCA0583 hypothetical protein
identified by Glimmer2; putative
genbank 15601342 NP_232973.1 261 521497 522282
220875 hypothetical VCA0584 glutathione S-transferase, putative
similar to PID:643638; identified by sequence similarity; putative
genbank 15601343 NP_232974.1 222 522368 523036
220876 hypothetical VCA0585 glutathione S-transferase, putative
similar to PID:2266412; identified by sequence similarity; putative
genbank 15601344 NP_232975.1 203 523048 523659
220877 hypothetical VCA0586 hypothetical protein
identified by Glimmer2; putative
genbank 15601345 NP_232976.1 198 523761 524357
220878 hypothetical VCA0587 hypothetical protein
identified by Glimmer2; putative
genbank 15601346 NP_232977.1 130 524354 524746
220879 hypothetical VCA0588 peptide ABC transporter, ATP-binding protein, putative
similar to SP:P33916 PID:405909 GB:U00096 PID:1736845 PID:1788506; identified by sequence similarity; putative
genbank 15601347 NP_232978.1 530 524830 526422
220880 hypothetical VCA0589 peptide ABC transporter, permease protein, putative
similar to SP:P33915 GB:U00008 PID:405908 GB:U00096 PID:1736844; identified by sequence similarity; putative
genbank 15601348 NP_232979.1 352 526419 527477
220881 hypothetical VCA0590 peptide ABC transporter, permease protein, putative
similar to SP:P33914 GB:U00008 PID:405905 GB:U00096 PID:1736843; identified by sequence similarity; putative
genbank 15601349 NP_232980.1 360 527474 528556
220882 hypothetical VCA0591 peptide ABC transporter, periplasmic peptide-binding protein, putative
similar to SP:P33913 GB:U00008 PID:453986 GB:U00096 PID:1788503; identified by sequence similarity; putative
genbank 15601350 NP_232981.1 611 528565 530400
220883 hypothetical VCA0592 MutT/nudix family protein
similar to SP:P46351; identified by sequence similarity; putative
genbank 15601351 NP_232982.1 186 530597 531157
220884 hypothetical VCA0593 hypothetical protein
identified by Glimmer2; putative
genbank 15601352 NP_232983.1 310 531211 532143
220885 hypothetical VCA0594 hemolysin
similar to PID:1197184; identified by sequence similarity; putative
genbank 15601353 NP_232984.1 93 532353 532634
220886 hypothetical VCA0595 hypothetical protein
identified by Glimmer2; putative
genbank 15601354 NP_232985.1 317 532716 533669
220887 hypothetical VCA0597 hypothetical protein
identified by Glimmer2; putative
genbank 15601355 NP_232986.1 93 535080 535361
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220888 hypothetical VCA0598 hypothetical protein
identified by Glimmer2; putative
genbank 15601356 NP_232987.1 40 535373 535495
220889 hypothetical VCA0599 hypothetical protein
identified by Glimmer2; putative
genbank 15601357 NP_232988.1 301 535461 536366
220890 hypothetical VCA0600 repressor protein PhnR, putative
similar to GP:1763080; identified by sequence similarity; putative
genbank 15601358 NP_232989.1 234 536432 537136
220891 hypothetical VCA0601 ABC transporter, permease protein
similar to GB:L42023 PID:1003160 PID:1222041 PID:1204387 PID:1573082; identified by sequence similarity; putative
genbank 15601359 NP_232990.1 592 537161 538939
220892 hypothetical VCA0602 ABC transporter, ATP-binding protein
similar to PID:1653298; identified by sequence similarity; putative
genbank 15601360 NP_232991.1 403 538872 540083
220893 hypothetical VCA0603 ABC transporter, periplasmic substrate-binding protein
similar to GB:L42023 SP:P43950 SP:P43951 PID:1003162 PID:1003164; identified by sequence similarity; putative
genbank 15601361 NP_232992.1 339 540239 541258
220894 hypothetical VCA0604 2-aminoethylphosphonate:pyruvate aminotransferase
similar to GP:1763079; identified by sequence similarity; putative
genbank 15601362 NP_232993.1 367 541490 542593
220895 hypothetical VCA0605 4-aminobutyrate aminotransferase
catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
genbank 15601363 NP_232994.1 465 542611 544008
220896 hypothetical VCA0606 phosphonoacetaldehyde phosphonohydrolase
similar to GP:1763078; identified by sequence similarity; putative
genbank 15601364 NP_232995.1 271 544015 544830
220897 hypothetical VCA0607 nucleoside diphosphate kinase regulator
Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation
genbank 15601365 NP_232996.1 135 544995 545402
220898 hypothetical VCA0608 nucleotidase
manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily
genbank 15601366 NP_232997.1 224 545462 546136
220899 hypothetical VCA0609 hypothetical protein
identified by Glimmer2; putative
genbank 15601367 NP_232998.1 60 546331 546513
220900 hypothetical VCA0610 sigma cross-reacting protein 27A
similar to GB:D13188 SP:P26428 PID:436038 PID:606148 GB:U00096; identified by sequence similarity; putative
genbank 15601368 NP_232999.1 216 546518 547168
220901 hypothetical VCA0611 hypothetical protein
identified by Glimmer2; putative
genbank 15601369 NP_233000.1 45 547305 547442
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
220902 mscL hypothetical VCA0612 large-conductance mechanosensitive channel
forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
genbank 15601370 NP_233001.1 136 547439 547849


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