| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
|---|---|---|---|---|---|---|---|---|---|---|
| 150119 | hypothetical | BPSS1867 | putative membrane protein Similar to Clostridium acetobutylicum conserved membrane protein, possible homolog of CAAX-like membrane endopeptidase cac0420 SWALL:Q97LY0 (EMBL:AE007556) (276 aa) fasta scores: E(): 5.8e-12, 27.13% id in 269 aa, and to Caulobacter crescentus membrane protein, putative cc2538 SWALL:Q9A5B2 (EMBL:AE005921) (309 aa) fasta scores: E(): 2.4e-11, 27.63% id in 304 aa | genbank | 52213301 | CAH39344.1 | 314 | 2536426 | 2537370 | |
| 150120 | hypothetical | BPSS1868 | putative voltage gated chloride channel membrane protein Similar to Xanthomonas campestris hypothetical protein xcc1977 SWALL:Q8P988 (EMBL:AE012302) (440 aa) fasta scores: E(): 6.5e-89, 61.11% id in 414 aa, and to Clostridium perfringens hypothetical protein cpe0590 SWALL:Q8XMU8 (EMBL:AP003187) (437 aa) fasta scores: E(): 4.1e-60, 44.98% id in 389 aa | genbank | 52213302 | CAH39345.1 | 427 | 2537573 | 2538856 | |
| 150121 | hypothetical | BPSS1869 | putative dehalogenase Similar to Pseudomonas aeruginosa probable haloacid dehalogenase pa0810 SWALL:Q9I5C9 (EMBL:AE004516) (233 aa) fasta scores: E(): 1.6e-37, 48.08% id in 235 aa, and to Pseudomonas sp. 2-haloalkanoic acid dehalogenase I SWALL:HAD1_PSESP (SWALL:P24069) (227 aa) fasta scores: E(): 1e-08, 31.88% id in 207 aa | genbank | 52213303 | CAH39346.1 | 240 | 2539182 | 2539904 | |
| 150122 | hypothetical | BPSS1870 | putative chemotaxis-related methylesterase protein Similar to Salmonella typhimurium protein-glutamate methylesterase CheB or stm1917 SWALL:CHEB_SALTY (SWALL:P04042) (349 aa) fasta scores: E(): 3e-26, 32.53% id in 335 aa, and to Escherichia coli protein-glutamate methylesterase CheB or b1883 SWALL:CHEB_ECOLI (SWALL:P07330) (349 aa) fasta scores: E(): 3.1e-25, 31.94% id in 335 aa | genbank | 52213304 | CAH39347.1 | 342 | 2540279 | 2541307 | |
| 150123 | hypothetical | BPSS1871 | putative chemotaxis-related histidine kinase protein Similar to Thermotoga maritima chemotaxis protein CheA or tm0702 SWALL:CHEA_THEMA (SWALL:Q56310) (671 aa) fasta scores: E(): 2.2e-33, 27.4% id in 708 aa, and to Rhizobium loti chemotaxis histidine kinase mll9511 SWALL:Q98PD0 (EMBL:AP003017) (757 aa) fasta scores: E(): 1.1e-104, 49.07% id in 864 aa | genbank | 52213305 | CAH39348.1 | 864 | 2541314 | 2543908 | |
| 150124 | hypothetical | BPSS1872 | putative chemotaxis-related protein Similar to Rhizobium loti hypothetical protein mll9513 SWALL:Q98PC9 (EMBL:AP003017) (234 aa) fasta scores: E(): 1.2e-21, 38.33% id in 240 aa, and the C-terminal region of Rhizobium meliloti chemotaxis protein CheW or r00640 or smc03008 SWALL:CHEW_RHIME (SWALL:Q52881) (155 aa) fasta scores: E(): 1.7e-05, 31.25% id in 144 aa | genbank | 52213306 | CAH39349.1 | 244 | 2543905 | 2544639 | |
| 150125 | hypothetical | BPSS1873 | putative chemotaxis-related methyltranferase protein Similar to Ralstonia solanacearum putative methyltransferase protein rsp1647 or rs02206 SWALL:Q8XPJ3 (EMBL:AL646086) (466 aa) fasta scores: E(): 1.3e-45, 37.71% id in 684 aa, and to Myxococcus xanthus protein methyltransferase FrzF SWALL:FRZF_MYXXA (SWALL:P31759) (593 aa) fasta scores: E(): 7.1e-08, 27.28% id in 546 aa | genbank | 52213307 | CAH39350.1 | 684 | 2544620 | 2546674 | |
| 150126 | hypothetical | BPSS1874 | putative chemotaxis-related protein Similar to Pseudomonas putida putative purine-binding chemotaxis protein CheW3 SWALL:Q93A55 (EMBL:AF430345) (168 aa) fasta scores: E(): 1.2e-08, 39.61% id in 154 aa, and to Pseudomonas aeruginosa CheW or pa1464 SWALL:O87130 (EMBL:AB012767) (159 aa) fasta scores: E(): 0.00051, 35.44% id in 79 aa | genbank | 52213308 | CAH39351.1 | 180 | 2546671 | 2547213 | |
| 150127 | hypothetical | BPSS1875 | putative chemotaxis-related protein Similar to Pseudomonas aeruginosa probable chemotaxis transducer pa3708 SWALL:Q9HXT3 (EMBL:AE004789) (542 aa) fasta scores: E(): 1.4e-91, 57.51% id in 539 aa, and to Pseudomonas aeruginosa protein PilJ or pa0411 SWALL:PILJ_PSEAE (SWALL:P42257) (682 aa) fasta scores: E(): 4.5e-21, 27.94% id in 526 aa | genbank | 52213309 | CAH39352.1 | 558 | 2547224 | 2548900 | |
| 150128 | hypothetical | BPSS1876 | putative sensor kinase/response regulator fusion protein N-terminal region similar to Pseudomonas aeruginosa probable two-component response regulator pa3702 SWALL:Q9HXT9 (EMBL:AE004789) (347 aa) fasta scores: E(): 3.7e-29, 64.92% id in 134 aa, C-terminal region to Caulobacter crescentus sensory box histidine kinase, putative cc3327 SWALL:Q9A377 (EMBL:AE005994) (761 aa) fasta scores: E(): 9.5e-22, 37.61% id in 226 aa, and in full length to Mycobacterium leprae sensor-like histidine kinase SenX3 or ml2440 or b2168_c3_247 SWALL:SEX3_MYCLE (SWALL:P54883) (443 aa) fasta scores: E(): 1.9e-15, 29.85% id in 335 aa | genbank | 52213310 | CAH39353.1 | 365 | 2549071 | 2550168 | |
| 150129 | hypothetical | BPSS1876A | putative exported protein No significant database matches | genbank | 52213311 | CAH39354.1 | 107 | 2550617 | 2550940 | |
| 150130 | hypothetical | BPSS1877 | hypothetical protein No significant database matches | genbank | 52213312 | CAH39355.1 | 111 | 2550984 | 2551319 | |
| 150131 | hypothetical | BPSS1878 | putative dehydrogenase Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 5.2e-45, 36.61% id in 478 aa, and to Rhizobium sp. probable succinate-semialdehyde dehydrogenase [NADP+] GabD or y4sJ SWALL:GABD_RHISN (SWALL:P55653) (491 aa) fasta scores: E(): 1.6e-42, 34.51% id in 481 aa | genbank | 52213313 | CAH39356.1 | 477 | 2551599 | 2553032 | |
| 150132 | hypothetical | BPSS1879 | putative acetolactate synthase Similar to Bacillus subtilis acetolactate synthase AlsS SWALL:ILVX_BACSU (SWALL:Q04789) (571 aa) fasta scores: E(): 2.8e-57, 32.78% id in 543 aa, and to Pseudomonas aeruginosa probable acetolactate synthase large subunit pa4180 SWALL:Q9HWK1 (EMBL:AE004834) (547 aa) fasta scores: E(): 3.5e-155, 69.57% id in 539 aa | genbank | 52213314 | CAH39357.1 | 546 | 2553124 | 2554764 | |
| 150133 | hypothetical | BPSS1880 | putative Na+/H+ antiporter membrane protein Similar to Agrobacterium tumefaciens Na+/H+ antiporter atu3059 or agr_l_3497 SWALL:Q8UBF7 (EMBL:AE009236) (550 aa) fasta scores: E(): 7e-101, 53.2% id in 530 aa, and to Rhizobium loti Na+/H+ antiporter mll3064 SWALL:Q98H22 (EMBL:AP003001) (517 aa) fasta scores: E(): 8.4e-49, 36.46% id in 521 aa | genbank | 52213315 | CAH39358.1 | 526 | 2555071 | 2556651 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150134 | hypothetical | BPSS1881 | putative membrane protein Similar to Escherichia coli hypothetical protein YjiN or b4336 SWALL:YJIN_ECOLI (SWALL:P39385) (426 aa) fasta scores: E(): 1.1e-85, 54.34% id in 414 aa, and to Salmonella typhi putative membrane protein sty4873 SWALL:Q8Z0X2 (EMBL:AL627284) (423 aa) fasta scores: E(): 2.2e-85, 53.86% id in 414 aa | genbank | 52213316 | CAH39359.1 | 428 | 2556811 | 2558097 | |
| 150135 | hypothetical | BPSS1882 | putative acetyltransferase Similar to Ralstonia solanacearum probable acetyltransferase protein rsp0265 or rs03701 SWALL:Q8XT50 (EMBL:AL646077) (184 aa) fasta scores: E(): 1.4e-07, 41.28% id in 109 aa, and to Myxococcus xanthus ActC SWALL:Q93P57 (EMBL:AF350253) (437 aa) fasta scores: E(): 1.7e-06, 37.31% id in 134 aa | genbank | 52213317 | CAH39360.1 | 141 | 2558138 | 2558563 | |
| 150136 | hypothetical | BPSS1883 | conserved hypothetical protein Similar to Xanthomonas axonopodis cardiolipin synthase Cls or xac2871 SWALL:AAM37716 (EMBL:AE011929) (520 aa) fasta scores: E(): 1.5e-61, 41.13% id in 530 aa, and to Pseudomonas aeruginosa hypothetical protein pa5310 SWALL:Q9HTP4 (EMBL:AE004943) (529 aa) fasta scores: E(): 1.7e-61, 40.15% id in 528 aa | genbank | 52213318 | CAH39361.1 | 550 | 2558842 | 2560494 | |
| 150137 | hypothetical | BPSS1884 | conserved hypothetical protein Similar to Ralstonia solanacearum putative HIT-like protein rsp0494 or rs00372 SWALL:Q8XSI0 (EMBL:AL646079) (144 aa) fasta scores: E(): 6.9e-29, 58.08% id in 136 aa, and to Caulobacter crescentus HIT family protein cc2470 SWALL:Q9A5H7 (EMBL:AE005916) (144 aa) fasta scores: E(): 7.9e-23, 50.72% id in 138 aa | genbank | 52213319 | CAH39362.1 | 138 | 2560561 | 2560977 | |
| 150138 | hypothetical | BPSS1885 | putative aromatic hydrocarbons catabolism-related reductase Similar to Rhodococcus erythropolis rhodocoxin reductase ThcD SWALL:THCD_RHOER (SWALL:P43494) (426 aa) fasta scores: E(): 1.7e-39, 37.1% id in 407 aa, and to Escherichia coli 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3) HcaD or PhdA or HcaA4 or b2542 SWALL:HCAD_ECOLI (SWALL:P77650) (400 aa) fasta scores: E(): 4.7e-38, 37.83% id in 407 aa | genbank | 52213320 | CAH39363.1 | 413 | 2561180 | 2562421 | |
| 150139 | hypothetical | BPSS1886 | putative aromatic hydrocarbons catabolism-related dioxygenase Similar to Pseudomonas aeruginosa naphthalene 1,2-dioxygenase system ferredoxin component NdoA or PahA2 SWALL:NDOA_PSEAE (SWALL:Q51493) (103 aa) fasta scores: E(): 2.8e-13, 44% id in 100 aa, and to Pseudomonas putida, and Pseudomonas sp. naphthalene 1,2-dioxygenase system ferredoxin component NdoA or NahAB or DoxA or NdoC1 SWALL:NDOA_PSEPU (SWALL:P23082) (103 aa) fasta scores: E(): 1.1e-12, 42.26% id in 97 aa | genbank | 52213321 | CAH39364.1 | 109 | 2562408 | 2562737 | |
| 150140 | hypothetical | BPSS1887 | putative aromatic oxygenase Similar to Sphingomonas aromaticivorans small subunit aromatic oxygenase BphA2D SWALL:O85985 (EMBL:AF079317) (162 aa) fasta scores: E(): 7.8e-27, 50.36% id in 137 aa, and to Pseudomonas aeruginosa ortho-halobenzoate 1,2-dioxygenase beta-isp protein OhbA SWALL:Q9Z5W2 (EMBL:AF121970) (176 aa) fasta scores: E(): 8.4e-27, 48.36% id in 153 aa. Note: The N-terminal region of this CDS does not present similarities with the database matches hit by the rest of the CDS | genbank | 52213322 | CAH39365.1 | 165 | 2562759 | 2563256 | |
| 150141 | hypothetical | BPSS1888 | putative aromatic oxygenase Similar to Sphingomonas aromaticivorans large subunit aromatic oxygenase BphA1C SWALL:O85993 (EMBL:AF079317) (420 aa) fasta scores: E(): 5e-83, 49.88% id in 419 aa, and to Pseudomonas aeruginosa O-halobenzoate 1,2-dioxygenase large subunit OhbA SWALL:Q93AD8 (EMBL:AF422937) (401 aa) fasta scores: E(): 8.3e-72, 46.34% id in 397 aa | genbank | 52213323 | CAH39366.1 | 418 | 2563271 | 2564527 | |
| 150142 | hypothetical | BPSS1889 | putative AraC-family transcriptional regulator Similar to Ralstonia solanacearum probable transcription regulator protein rsc1832 or rs04267 SWALL:Q8XYC6 (EMBL:AL646067) (342 aa) fasta scores: E(): 1.7e-19, 33.62% id in 348 aa, and to Pseudomonas putida xylDLEGF operon transcriptional activator 1 XylS1 SWALL:XYS1_PSEPU (SWALL:Q04710) (321 aa) fasta scores: E(): 2.4e-14, 30.53% id in 298 aa. Possible alternative translational start sites. | genbank | 52213324 | CAH39367.1 | 346 | 2564727 | 2565767 | |
| 150143 | hypothetical | BPSS1890 | putative cat operon LysR-family transcriptional activator Similar to Acinetobacter lwoffii probable cat1 operon transcriptional activator SWALL:CATR_ACILW (SWALL:O33945) (303 aa) fasta scores: E(): 5.3e-46, 47.29% id in 296 aa, and to Burkholderia sp. NK8 LysR-type transcriptional regulatory protein CbeR SWALL:Q9AQS6 (EMBL:AB024746) (306 aa) fasta scores: E(): 2.5e-53, 55.19% id in 279 aa | genbank | 52213325 | CAH39368.1 | 295 | 2565817 | 2566704 | |
| 150144 | catB | hypothetical | BPSS1891 | muconate cycloisomerase I Similar to Acinetobacter lwoffii muconate cycloisomerase I 1 CatB1 SWALL:CTB1_ACILW (SWALL:O33946) (379 aa) fasta scores: E(): 7.3e-80, 62.53% id in 371 aa, and to Burkholderia sp. TH2 cis,cis-muconate lactonizing enzyme CatB2 SWALL:BAC16768 (EMBL:AB035325) (395 aa) fasta scores: E(): 3.5e-92, 73.76% id in 343 aa | genbank | 52213326 | CAH39369.1 | 377 | 2566794 | 2567927 |
| 150145 | catA | hypothetical | BPSS1892 | catechol 1,2-dioxygenase Similar to Acinetobacter lwoffii catechol 1,2-dioxygenase 2 CatA2 SWALL:CTA2_ACILW (SWALL:O33950) (275 aa) fasta scores: E(): 4.6e-84, 81.22% id in 261 aa, and to Burkholderia sp. TH2 catechol 1,2-dioxygenase CatA2 SWALL:BAC16769 (EMBL:AB035325) (300 aa) fasta scores: E(): 3.4e-90, 74.66% id in 300 aa | genbank | 52213327 | CAH39370.1 | 300 | 2567962 | 2568864 |
| 150146 | catC | hypothetical | BPSS1893 | muconolactone delta-isomerase Similar to Acinetobacter lwoffii muconolactone delta-isomerase 2 CatC2 SWALL:CTC2_ACILW (SWALL:O33951) (96 aa) fasta scores: E(): 2.9e-32, 80.2% id in 96 aa, and to Pseudomonas putida muconolactone delta-isomerase CatC SWALL:CATC_PSEPU (SWALL:P00948) (96 aa) fasta scores: E(): 4.4e-28, 73.95% id in 96 aa | genbank | 52213328 | CAH39371.1 | 96 | 2568902 | 2569192 |
| 150147 | cyoD | hypothetical | BPSS1894 | cytochrome O ubiquinol oxidase protein Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri cytochrome O ubiquinol oxidase protein CyoD or b0429 or z0532 or ecs0483 or sf0370 SWALL:CYOD_ECOLI (SWALL:P18403) (109 aa) fasta scores: E(): 2.7e-16, 49.5% id in 101 aa, and to Pseudomonas putida cytochrome O ubiquinol oxidase protein CyoD SWALL:CYOD_PSEPU (SWALL:Q9WWR4) (110 aa) fasta scores: E(): 2.7e-15, 42.72% id in 110 aa | genbank | 52213329 | CAH39372.1 | 110 | 2569312 | 2569644 |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150148 | cyoC | hypothetical | BPSS1895 | cytochrome O ubiquinol oxidase subunit III Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri cytochrome O ubiquinol oxidase subunit III CyoC or b0430 or c0541 or sf0371 SWALL:CYOC_ECOLI (SWALL:P18402) (204 aa) fasta scores: E(): 1.1e-41, 53.6% id in 194 aa, and to Pseudomonas putida cytochrome O ubiquinol oxidase subunit III CyoC SWALL:CYOC_PSEPU (SWALL:Q9WWR3) (207 aa) fasta scores: E(): 5.3e-44, 55.72% id in 192 aa | genbank | 52213330 | CAH39373.1 | 197 | 2569645 | 2570238 |
| 150149 | cyoB | hypothetical | BPSS1896 | ubiquinol oxidase polypeptide I Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB or b0431 or c0542 or z0534 or ecs0485 SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 1.5e-189, 67.22% id in 653 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide I precursor CyaA SWALL:QOX1_ACEAC (SWALL:P98009) (664 aa) fasta scores: E(): 4.4e-197, 69.06% id in 666 aa | genbank | 52213331 | CAH39374.1 | 670 | 2570253 | 2572265 |
| 150150 | cyoA | hypothetical | BPSS1897 | ubiquinol oxidase polypeptide II precursor Similar to Escherichia coli, and Escherichia coli O6 ubiquinol oxidase polypeptide II precursor CyoA or b0432 or c0543 SWALL:CYOA_ECOLI (SWALL:P18400) (315 aa) fasta scores: E(): 6e-66, 55.9% id in 288 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide II precursor CyaB SWALL:QOX2_ACEAC (SWALL:P50653) (307 aa) fasta scores: E(): 7.3e-73, 63.76% id in 287 aa | genbank | 52213332 | CAH39375.1 | 295 | 2572268 | 2573155 |
| 150151 | fadH | hypothetical | BPSS1898 | 2,4-dienoyl-CoA reductase [NADPH] Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] FadH or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 3e-151, 60.71% id in 672 aa, and to Pseudomonas aeruginosa 2,4-dienoyl-CoA reductase FadH1 or pa3092 SWALL:Q9HZB6 (EMBL:AE004733) (679 aa) fasta scores: E(): 4.9e-170, 65.73% id in 677 aa | genbank | 52213333 | CAH39376.1 | 677 | 2573880 | 2575913 |
| 150152 | hypothetical | BPSS1899 | putative AraC-family regulatory protein Similar to Pseudomonas aeruginosa ornithine utilization regulator OruR or pa0831 SWALL:ORUR_PSEAE (SWALL:P72171) (339 aa) fasta scores: E(): 2.5e-27, 33.23% id in 346 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv1395 or mt1440 or mtcy21b4.12 SWALL:YD95_MYCTU (SWALL:P71663) (344 aa) fasta scores: E(): 1.7e-20, 29.88% id in 338 aa | genbank | 52213334 | CAH39377.1 | 350 | 2576063 | 2577115 | |
| 150153 | hypothetical | BPSS1900 | putative LysR-family transcriptional regulator Similar to Xanthomonas axonopodis transcriptional regulator LysR family xac4038 SWALL:Q8PFE5 (EMBL:AE012052) (304 aa) fasta scores: E(): 2e-63, 62.45% id in 293 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family atu2191 or agr_c_3985 SWALL:Q8UDD6 (EMBL:AE009170) (314 aa) fasta scores: E(): 5.2e-57, 53.87% id in 310 aa | genbank | 52213335 | CAH39378.1 | 315 | 2577069 | 2578016 | |
| 150154 | hypothetical | BPSS1901 | conserved hypothetical protein Similar to Xanthomonas axonopodis hypothetical protein xac4039 SWALL:Q8PFE4 (EMBL:AE012052) (330 aa) fasta scores: E(): 2.2e-79, 64.48% id in 321 aa, and to Ralstonia solanacearum hypothetical protein rsc3335 or rs02569 SWALL:Q8XU58 (EMBL:AL646074) (318 aa) fasta scores: E(): 9.4e-70, 59.04% id in 315 aa | genbank | 52213336 | CAH39379.1 | 333 | 2578111 | 2579112 | |
| 150155 | hypothetical | BPSS1902 | putative LysR-family transcriptional regulator Similar to Burkholderia sp. NK8 LysR-type transcriptional regulatory protein CbeR SWALL:Q9AQS6 (EMBL:AB024746) (306 aa) fasta scores: E(): 2.8e-94, 83.05% id in 301 aa, and to Acinetobacter calcoaceticus ben and cat operon transcriptional regulator BenM SWALL:BENM_ACICA (SWALL:O68014) (304 aa) fasta scores: E(): 8.9e-54, 47.69% id in 304 aa | genbank | 52213337 | CAH39380.1 | 304 | 2579291 | 2580205 | |
| 150156 | benA | hypothetical | BPSS1903 | benzoate 1,2-dioxygenase alpha subunit Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase alpha subunit BenA SWALL:BENA_ACICA (SWALL:P07769) (461 aa) fasta scores: E(): 2.6e-150, 74.65% id in 438 aa, and to Pseudomonas putida benzoate 1,2-dioxygenase large subunit BenA SWALL:Q93SR8 (EMBL:AY026914) (455 aa) fasta scores: E(): 1.8e-142, 73.68% id in 437 aa | genbank | 52213338 | CAH39381.1 | 455 | 2580429 | 2581796 |
| 150157 | benB | hypothetical | BPSS1904 | benzoate 1,2-dioxygenase beta subunit Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase beta subunit BenB SWALL:BENB_ACICA (SWALL:P07770) (169 aa) fasta scores: E(): 1.8e-48, 71.16% id in 163 aa, and to Pseudomonas putida benzoate 1,2-dioxygenase small subunit BenB SWALL:Q93SR7 (EMBL:AY026914) (162 aa) fasta scores: E(): 1.3e-42, 66.45% id in 155 aa | genbank | 52213339 | CAH39382.1 | 163 | 2581793 | 2582284 |
| 150158 | benC | hypothetical | BPSS1905 | benzoate 1,2-dioxygenase electron transfer component Similar to Acinetobacter calcoaceticus benzoate 1,2-dioxygenase electron transfer component [includes: ferredoxin; ferredoxin--NAD(+) reductase (EC 1.18.1.3)] BenC SWALL:BENC_ACICA (SWALL:P07771) (348 aa) fasta scores: E(): 3.8e-77, 61.49% id in 335 aa, and to Pseudomonas putida benzoate dioxygenase-ferredoxin reductase BenC SWALL:Q9L7Y3 (EMBL:AF218267) (336 aa) fasta scores: E(): 2.4e-69, 56.25% id in 336 aa | genbank | 52213340 | CAH39383.1 | 339 | 2582328 | 2583347 |
| 150159 | benD | hypothetical | BPSS1906 | cis-1,2-dihydroxycyclohexa-3, 5-diene-1-carboxylate dehydrogenase Similar to Acinetobacter calcoaceticus cis-1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase BenD SWALL:BEND_ACICA (SWALL:P07772) (261 aa) fasta scores: E(): 1.3e-60, 64.45% id in 256 aa, and to Pseudomonas putida cis-diol dehydrogenase BenD SWALL:Q9L7Y2 (EMBL:AF218267) (253 aa) fasta scores: E(): 2.6e-61, 67.57% id in 256 aa | genbank | 52213341 | CAH39384.1 | 264 | 2583344 | 2584138 |
| 150160 | hypothetical | BPSS1907 | putative membrane protein Similar to Caulobacter crescentus carboxylesterase family protein cc2298 SWALL:Q9A5Z9 (EMBL:AE005900) (289 aa) fasta scores: E(): 3.6e-36, 43.94% id in 289 aa, and to Xanthomonas campestris carboxylesterase xcc2285 SWALL:Q8P8F7 (EMBL:AE012336) (291 aa) fasta scores: E(): 7.3e-32, 44.07% id in 270 aa | genbank | 52213342 | CAH39385.1 | 302 | 2584182 | 2585090 | |
| 150161 | hypothetical | BPSS1908 | putative MarR-family regulatory protein Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3067 SWALL:Q9HZE1 (EMBL:AE004731) (147 aa) fasta scores: E(): 3.7e-41, 80.82% id in 146 aa, and to Mycobacterium tuberculosis hypothetical transcriptional regulator rv0880 or mt0903.1 or mtcy31.08 SWALL:Y880_MYCTU (SWALL:Q10542) (143 aa) fasta scores: E(): 4.2e-09, 36.23% id in 138 aa. Note: This CDS is longer in its C-terminal region than most of its database matches | genbank | 52213343 | CAH39386.1 | 161 | 2585463 | 2585948 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150162 | hypothetical | BPSS1909 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa3066 SWALL:Q9HZE2 (EMBL:AE004731) (190 aa) fasta scores: E(): 1e-53, 75.26% id in 190 aa, and to Ralstonia solanacearum putative hydrolase protein rsp0438 or rs00897 SWALL:Q8XSM9 (EMBL:AL646078) (197 aa) fasta scores: E(): 2.8e-10, 35.17% id in 145 aa | genbank | 52213344 | CAH39387.1 | 190 | 2585945 | 2586517 | |
| 150163 | hypothetical | BPSS1910 | putative membrane protein Similar to Pseudomonas aeruginosa hypothetical protein pa3065 SWALL:Q9HZE3 (EMBL:AE004731) (328 aa) fasta scores: E(): 8e-70, 63.6% id in 327 aa | genbank | 52213345 | CAH39388.1 | 350 | 2586540 | 2587592 | |
| 150164 | hypothetical | BPSS1911 | putative membrane protein No significant database matches | genbank | 52213346 | CAH39389.1 | 494 | 2588240 | 2589724 | |
| 150165 | tnpA | hypothetical | BPSS1912 | transposase for insertion sequence element IS1001 Similar to Bordetella parapertussis transposase for insertion sequence element IS1001 TnpA SWALL:TNPA_BORPA (SWALL:Q06126) (406 aa) fasta scores: E(): 6.2e-138, 78.07% id in 406 aa, and to Ralstonia solanacearum ISrso15-transposase protein rsp1547 or rs02103 or rsc2573 or rs00774 SWALL:Q8XFK1 (EMBL:AL646085) (406 aa) fasta scores: E(): 8.5e-161, 91.62% id in 406 aa | genbank | 52213347 | CAH39390.1 | 406 | 2589898 | 2591118 |
| 150166 | lysP | hypothetical | BPSS1913 | lysine-specific permease Similar to Escherichia coli lysine-specific permease LysP or CadR (WALL:P25737) (488 aa) fasta scores: E(): 5.6e-145, 75.05% id in 477 aa, and to Ralstonia solanacearum probable lysine-specific permease transmembrane protein rsc1758 or rs02945 SWALL:Q8XYK0 (EMBL:AL646066) (512 aa) fasta scores: E(): 1.5e-152, 78.79% id in 481 aa | genbank | 52213348 | CAH39391.1 | 520 | 2591285 | 2592847 |
| 150167 | hypothetical | BPSS1914 | putative membrane protein Similar to Pseudomonas aeruginosa hypothetical protein pa1542 SWALL:Q9I3H1 (EMBL:AE004582) (278 aa) fasta scores: E(): 5.1e-33, 39.2% id in 278 aa, and to Ralstonia solanacearum hypothetical protein rsp1030 or rs02367 SWALL:Q8XR38 (EMBL:AL646082) (250 aa) fasta scores: E(): 2.7e-09, 29.63% id in 243 aa | genbank | 52213349 | CAH39392.1 | 296 | 2593487 | 2594377 | |
| 150168 | hypothetical | BPSS1915 | putative metallo-beta-lactamase family protein Similar to Pseudomonas putida metallo-beta-lactamase family protein pp3291 SWALL:AAN68898 (EMBL:AE016786) (455 aa) fasta scores: E(): 5.1e-93, 54.48% id in 457 aa, and to Chlorobium tepidum metallo-beta-lactamase superfamily protein ct0598 SWALL:Q8KET4 (EMBL:AE012833) (469 aa) fasta scores: E(): 3e-57, 38.01% id in 463 aa | genbank | 52213350 | CAH39393.1 | 459 | 2595091 | 2596470 | |
| 150169 | phbB | hypothetical | BPSS1916 | acetoacetyl-CoA reductase Similar to Alcaligenes eutrophus acetoacetyl-CoA reductase PhbB SWALL:PHBB_ALCEU (SWALL:P14697) (246 aa) fasta scores: E(): 2.4e-46, 55.32% id in 244 aa, and to Zoogloea ramigera acetoacetyl-CoA reductase PhbB SWALL:PHBB_ZOORA (SWALL:P23238) (241 aa) fasta scores: E(): 3.9e-42, 53.25% id in 246 aa | genbank | 52213351 | CAH39394.1 | 248 | 2597063 | 2597809 |
| 150170 | hypothetical | BPSS1917 | putative crp-family transcriptional regulator Similar to Ralstonia solanacearum probable transcription regulator protein rsc0190 or rs00622 SWALL:Q8Y2Z1 (EMBL:AL646057) (266 aa) fasta scores: E(): 5e-49, 51.75% id in 257 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri fumarate and nitrate reduction regulatory protein Fnr or NirR or b1334 or c1807 or z2433 or ecs1915 or sf1836 SWALL:FNR_ECOLI (SWALL:P03019) (250 aa) fasta scores: E(): 1.2e-33, 39.38% id in 226 aa. Note: This CDS is longer in its N-terminal region than most of its database matches | genbank | 52213352 | CAH39395.1 | 260 | 2598474 | 2599256 | |
| 150171 | hypothetical | BPSS1918 | putative alcohol dehydrogenase Similar to Ralstonia solanacearum probable alcohol dehydrogenase-like oxidoreductase protein rsc1505 or rs03800 SWALL:Q8XZ99 (EMBL:AL646064) (334 aa) fasta scores: E(): 4.3e-81, 66.26% id in 329 aa, and to Bacillus stearothermophilus alcohol dehydrogenase SWALL:ADH3_BACST (SWALL:P42328) (339 aa) fasta scores: E(): 8.8e-32, 34.02% id in 338 aa | genbank | 52213353 | CAH39396.1 | 328 | 2599462 | 2600448 | |
| 150172 | hypothetical | BPSS1919 | hypothetical protein No significant database matches | genbank | 52213354 | CAH39397.1 | 75 | 2600448 | 2600675 | |
| 150173 | hypothetical | BPSS1920 | hypothetical protein No significant database matches | genbank | 52213355 | CAH39398.1 | 142 | 2601413 | 2601841 | |
| 150174 | hypothetical | BPSS1921 | hypothetical protein No significant database matches | genbank | 52213356 | CAH39399.1 | 107 | 2602227 | 2602550 | |
| 150175 | hypothetical | BPSS1922 | conserved hypothetical protein Similar to Brucella melitensis 3-isopropylmalate dehydrogenase bmeii0271 SWALL:Q8YDA7 (EMBL:AE009665) (276 aa) fasta scores: E(): 1.5e-37, 44.36% id in 284 aa, and to Caulobacter crescentus hypothetical protein cc0810 SWALL:Q9AA01 (EMBL:AE005757) (260 aa) fasta scores: E(): 6.7e-37, 48.47% id in 262 aa. Possible alternative translational start site after codon 23 | genbank | 52213357 | CAH39400.1 | 315 | 2602830 | 2603777 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150176 | hypothetical | BPSS1923 | hypothetical protein No significant database matches | genbank | 52213358 | CAH39401.1 | 129 | 2604114 | 2604503 | |
| 150177 | hypothetical | BPSS1924 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0189 or rs00621 SWALL:Q8Y2Z2 (EMBL:AL646057) (215 aa) fasta scores: E(): 5.2e-36, 51.64% id in 213 aa, and to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.0034, 28.33% id in 180 aa | genbank | 52213359 | CAH39402.1 | 216 | 2605105 | 2605755 | |
| 150178 | hypothetical | BPSS1925 | hypothetical protein No significant database matches | genbank | 52213360 | CAH39403.1 | 392 | 2606114 | 2607292 | |
| 150179 | hypothetical | BPSS1926 | putative denylylsulfate kinase Similar to Bacillus halodurans probable adenylylsulfate kinase bh1489 SWALL:CYC1_BACHD (SWALL:Q9KCT0) (202 aa) fasta scores: E(): 1e-31, 48.24% id in 199 aa, and to Klebsiella aerogenes APS kinase CysC SWALL:Q9EYY1 (EMBL:AF308468) (201 aa) fasta scores: E(): 2.1e-29, 49.73% id in 189 aa | genbank | 52213361 | CAH39404.1 | 214 | 2607590 | 2608234 | |
| 150180 | hypothetical | BPSS1927 | putative methyl-accepting chemotaxis protein Similar to C-terminal region similar to C-terminal region of Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.7e-49, 47.9% id in 405 aa, and full length similar to Rahnella aquatilis putative methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 2.9e-63, 43.33% id in 540 aa | genbank | 52213362 | CAH39405.1 | 563 | 2608475 | 2610166 | |
| 150181 | hypothetical | BPSS1928 | hypothetical protein Weakly similar to Streptomyces coelicolor putative polysaccharide deacetylase sco2710 or scc61a.31 SWALL:Q9KYG2 (EMBL:AL939113) (229 aa) fasta scores: E(): 4.1e-06, 28.21% id in 241 aa, and to Staphylococcus caprae IcaB SWALL:Q9AIQ6 (EMBL:AF246926) (289 aa) fasta scores: E(): 5.9e-06, 21.79% id in 234 aa | genbank | 52213363 | CAH39406.1 | 279 | 2611158 | 2611997 | |
| 150182 | hypothetical | BPSS1929 | putative outer membrane lipoprotein Similar to Chlorobium tepidum ABC-type export system, outer membrane channel protein ct0554 SWALL:AAM71796 (EMBL:AE012830) (500 aa) fasta scores: E(): 9.1e-73, 47.88% id in 472 aa, and to Ralstonia solanacearum probable outer membrane channel lipoprotein rsc0166 or rs01036 SWALL:Q8Y315 (EMBL:AL646057) (480 aa) fasta scores: E(): 7.8e-59, 44% id in 475 aa | genbank | 52213364 | CAH39407.1 | 494 | 2612032 | 2613516 | |
| 150183 | hypothetical | BPSS1930 | putative ABC transport system, exported protein Similar to Chlorobium tepidum ABC-type export system, membrane fusion protein ct0553 SWALL:AAM71795 (EMBL:AE012830) (314 aa) fasta scores: E(): 1.8e-24, 46.92% id in 358 aa, and to Escherichia coli hypothetical membrane protein YbhG or b0795 SWALL:YBHG_ECOLI (SWALL:P75777) (332 aa) fasta scores: E(): 1.9e-07, 30.1% id in 299 aa | genbank | 52213365 | CAH39408.1 | 361 | 2613494 | 2614579 | |
| 150184 | hypothetical | BPSS1931 | putative ABC transport system, ATP-binding protein Similar to Chlorobium tepidum ABC-type export system, ATP-binding subunit ct0552 SWALL:AAM71794 (EMBL:AE012830) (239 aa) fasta scores: E(): 2.7e-53, 68.26% id in 230 aa, and to Bacillus halodurans ABC transporter bh2699 SWALL:Q9K9E9 (EMBL:AP001516) (251 aa) fasta scores: E(): 4e-25, 38.46% id in 221 aa | genbank | 52213366 | CAH39409.1 | 232 | 2614576 | 2615274 | |
| 150185 | hypothetical | BPSS1932 | putative ABC transport system, membrane protein Similar to Chlorobium tepidum ABC-type export system, membrane protein ct0551 SWALL:AAM71793 (EMBL:AE012830) (384 aa) fasta scores: E(): 1e-92, 64.28% id in 378 aa, and to Deinococcus radiodurans hypothetical protein dr0474 SWALL:Q9RX41 (EMBL:AE001906) (386 aa) fasta scores: E(): 2.5e-07, 24.61% id in 386 aa | genbank | 52213367 | CAH39410.1 | 378 | 2615277 | 2616413 | |
| 150186 | hypothetical | BPSS1933 | putative membrane protein No significant database matches | genbank | 52213368 | CAH39411.1 | 83 | 2616410 | 2616661 | |
| 150187 | hypothetical | BPSS1934 | putative universal stress protein Similar to Ralstonia solanacearum hypothetical protein rsp1561 or rs02117 SWALL:Q8XPS7 (EMBL:AL646085) (151 aa) fasta scores: E(): 1.5e-20, 49.66% id in 147 aa, and to Methanosarcina acetivorans universal stress protein ma4094 SWALL:Q8TIP8 (EMBL:AE011122) (153 aa) fasta scores: E(): 3.5e-11, 37.33% id in 150 aa. Note There is a possible alternative start codon 45 amino acid residues upstream | genbank | 52213369 | CAH39412.1 | 156 | 2616694 | 2617164 | |
| 150188 | hypothetical | BPSS1935 | putative TetR-family transcriptional regulator Similar to the N-terminal region of Ralstonia solanacearum putative transcription regulator protein rsp1164 or rs05643 SWALL:Q8XQQ7 (EMBL:AL646083) (233 aa) fasta scores: E(): 2e-05, 57.53% id in 73 aa, and very low similarity to the full length Rhizobium loti transcriptional regulator mll4816 SWALL:Q98D84 (EMBL:AP003005) (244 aa) fasta scores: E(): 0.047, 27.14% id in 221 aa | genbank | 52213370 | CAH39413.1 | 288 | 2617380 | 2618246 | |
| 150189 | hypothetical | BPSS1936 | putative outer membrane efflux protein Similar to Caulobacter crescentus efflux system protein cc0806 SWALL:Q9AA05 (EMBL:AE005757) (467 aa) fasta scores: E(): 3.7e-62, 44.9% id in 461 aa, and to Pseudomonas aeruginosa outer membrane protein precursor OprM or OprK or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 3.7e-61, 42.56% id in 484 aa. CDS is extended at the N-terminus in comparison to orthologues | genbank | 52213371 | CAH39414.1 | 508 | 2618540 | 2620066 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150190 | hypothetical | BPSS1937 | putative ABC transport system, exported protein Similar to Pseudomonas aeruginosa hypothetical protein pa5232 SWALL:Q9HTV8 (EMBL:AE004935) (357 aa) fasta scores: E(): 4.4e-67, 60.51% id in 352 aa, and to Escherichia coli hypothetical protein precursor YhiI or b3487 SWALL:YHII_ECOLI (SWALL:P37626) (355 aa) fasta scores: E(): 1.3e-63, 58.4% id in 351 aa | genbank | 52213372 | CAH39415.1 | 357 | 2620063 | 2621136 | |
| 150191 | hypothetical | BPSS1938 | putative ABC transport system, ATP-binding protein Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YhiH or b3486 SWALL:YHIH_ECOLI (SWALL:P37624) (894 aa) fasta scores: E(): 2.2e-102, 56.16% id in 1063 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu4667 or agr_l_430 SWALL:Q8U6Y9 (EMBL:AE009395) (930 aa) fasta scores: E(): 1.4e-101, 55.46% id in 1071 aa. Note: This CDS presents no similarities in the database matches between approx. residue 510 and approx. residue 690 | genbank | 52213373 | CAH39416.1 | 1074 | 2621133 | 2624357 | |
| 150192 | hypothetical | BPSS1939 | putative ABC transport system, membrane protein Similar to Escherichia coli, and Shigella flexneri hypothetical protein YhhJ or b3485 or sf3501 SWALL:YHHJ_ECOLI (SWALL:P31993) (374 aa) fasta scores: E(): 8.7e-92, 61.76% id in 374 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa5230 SWALL:Q9HTW0 (EMBL:AE004935) (374 aa) fasta scores: E(): 6.6e-91, 63.1% id in 374 aa | genbank | 52213374 | CAH39417.1 | 374 | 2624360 | 2625484 | |
| 150193 | hypothetical | BPSS1940 | putative sensor kinase/response regulator fusion protein Similar to Caulobacter crescentus sensory box histidine kinase/response regulator cc3225 SWALL:Q9A3H9 (EMBL:AE005986) (731 aa) fasta scores: E(): 9.5e-57, 35.17% id in 688 aa, and to Pseudomonas putida sensor histidine kinase/response regulator pp3651 SWALL:AAN69251 (EMBL:AE016787) (727 aa) fasta scores: E(): 6.1e-51, 33.19% id in 729 aa | genbank | 52213375 | CAH39418.1 | 611 | 2625634 | 2627469 | |
| 150194 | hypothetical | BPSS1941 | putative methyl-accepting chemotaxis transducer transmembrane protein Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 4.1e-44, 42.75% id in 414 aa, and to Ralstonia solanacearum putative methyl-accepting chemotaxis transducer transmembrane protein rsp1099 or rs02605 SWALL:Q8XQW9 (EMBL:AL646082) (513 aa) fasta scores: E(): 2.4e-84, 50.09% id in 515 aa | genbank | 52213376 | CAH39419.1 | 521 | 2627825 | 2629390 | |
| 150195 | hypothetical | BPSS1942 | putative membrane protein Similar to Ralstonia solanacearum probable transmembrane protein rsc0339 or rs03306 SWALL:Q8Y2J6 (EMBL:AL646058) (171 aa) fasta scores: E(): 4.6e-23, 46.78% id in 171 aa, and to Xanthomonas campestris hypothetical protein xcc3810 SWALL:AAM43484 (EMBL:AE012502) (165 aa) fasta scores: E(): 4.5e-13, 36% id in 150 aa | genbank | 52213377 | CAH39420.1 | 169 | 2629931 | 2630440 | |
| 150196 | hypothetical | BPSS1943 | hypothetical protein No significant database matches | genbank | 52213378 | CAH39421.1 | 167 | 2630498 | 2631001 | |
| 150197 | adhA | hypothetical | BPSS1944 | alcohol dehydrogenase Similar to Rhizobium meliloti alcohol dehydrogenase AdhA or ra0704 or sma1296 SWALL:ADHA_RHIME (SWALL:O31186) (340 aa) fasta scores: E(): 3e-84, 64.37% id in 334 aa, and to Brucella melitensis alcohol dehydrogenase bmei1746 SWALL:Q8YEY1 (EMBL:AE009608) (373 aa) fasta scores: E(): 4.7e-95, 72.35% id in 340 aa | genbank | 52213379 | CAH39422.1 | 341 | 2631078 | 2632103 |
| 150198 | atpG | hypothetical | BPSS1945 | ATP synthase gamma chain Similar to Thiobacillus ferrooxidans ATP synthase gamma chain AtpG SWALL:ATPG_THIFE (SWALL:P41169) (298 aa) fasta scores: E(): 4.9e-06, 24.91% id in 281 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ATP synthase gamma chain AtpG or UncG or PapC or b3733 or c4659 or z5231 or ecs4675 or sf3813 SWALL:ATPG_ECOLI (SWALL:P00837) (287 aa) fasta scores: E(): 0.00014, 22.66% id in 278 aa | genbank | 52213380 | CAH39423.1 | 282 | 2632318 | 2633166 |
| 150199 | atpA | hypothetical | BPSS1946 | ATP synthase alpha chain Similar to Bacillus subtilis ATP synthase alpha chain AtpA SWALL:ATPA_BACSU (SWALL:P37808) (501 aa) fasta scores: E(): 4.3e-70, 50% id in 460 aa, and to Aquifex aeolicus ATP synthase alpha chain AtpA or aq_679 SWALL:ATPA_AQUAE (SWALL:O66907) (503 aa) fasta scores: E(): 6.9e-72, 51.13% id in 440 aa. Note: This CDS is longer in its C-terminal region than most of its database matches and presents no similarities to the database matches | genbank | 52213381 | CAH39424.1 | 666 | 2633163 | 2635163 |
| 150200 | hypothetical | BPSS1947 | putative ATP synthase B subunit Similar to the N-terminal region of Methanosarcina barkeri ATP synthase B subunit AtpF SWALL:O31081 (EMBL:AF028006) (386 aa) fasta scores: E(): 3.2e-08, 26.98% id in 252 aa, and of Methanosarcina acetivorans H(+)-transporting ATP synthase, subunit B ma2435 SWALL:Q8TN58 (EMBL:AE010936) (329 aa) fasta scores: E(): 2.8e-07, 26.12% id in 245 aa | genbank | 52213382 | CAH39425.1 | 249 | 2635147 | 2635896 | |
| 150201 | atpE | hypothetical | BPSS1948 | ATP synthase C chain Similar to Synechocystis sp. ATP synthase C chain AtpE or AtpH or ssl2615 SWALL:ATPL_SYNY3 (SWALL:P27182) (81 aa) fasta scores: E(): 7.8e-12, 52.5% id in 80 aa, and to Methanosarcina barkeri ATP synthase C subunit AtpE SWALL:O31080 (EMBL:AF028006) (91 aa) fasta scores: E(): 4.3e-15, 60.52% id in 76 aa | genbank | 52213383 | CAH39426.1 | 82 | 2635910 | 2636158 |
| 150202 | hypothetical | BPSS1949 | putative ATP synthase A chain Similar to Clostridium acetobutylicum ATP synthase A chain AtpB or AtpA or cac2871 SWALL:ATP6_CLOAB (SWALL:O05097) (221 aa) fasta scores: E(): 4.3e-16, 31.98% id in 197 aa, and to Chlorobium tepidum ATP synthase F0, A subunit AtpB-1 or ct1029 SWALL:AAM72262 (EMBL:AE012866) (221 aa) fasta scores: E(): 1.5e-26, 42.38% id in 210 aa | genbank | 52213384 | CAH39427.1 | 233 | 2636155 | 2636856 | |
| 150203 | hypothetical | BPSS1950 | putative membrane protein No significant database matches | genbank | 52213385 | CAH39428.1 | 99 | 2636853 | 2637152 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150204 | hypothetical | BPSS1951 | putative ATP synthesis-related protein Very low similarity to Methanosarcina barkeri ATP synthase gene 1 AtpI SWALL:O31077 (EMBL:AF028006) (112 aa) fasta scores: E(): 0.0029, 27% id in 100 aa, and to Chlorobium tepidum ATP synthase, putative ct1031 SWALL:AAM72264 (EMBL:AE012866) (107 aa) fasta scores: E(): 0.0093, 25.77% id in 97 aa | genbank | 52213386 | CAH39429.1 | 158 | 2637154 | 2637630 | |
| 150205 | hypothetical | BPSS1952 | putative ATP synthase epsilon chain Low similarity to Methanosarcina barkeri ATP synthase epsilon subunit AtpC SWALL:O31076 (EMBL:AF028006) (144 aa) fasta scores: E(): 0.00048, 25.98% id in 127 aa, and to Bacillus caldotenax ATP synthase epsilon chain AtpC SWALL:ATPE_BACCA (SWALL:P41012) (132 aa) fasta scores: E(): 0.002, 31.78% id in 129 aa | genbank | 52213387 | CAH39430.1 | 151 | 2637651 | 2638106 | |
| 150206 | atpD | hypothetical | BPSS1953 | ATP synthase beta chain Similar to Clostridium acetobutylicum ATP synthase beta chain AtpD or cac2865 SWALL:ATPB_CLOAB (SWALL:Q9Z687) (466 aa) fasta scores: E(): 1.8e-84, 52.36% id in 466 aa, and to Lactobacillus casei ATP synthase beta chain AtpD SWALL:ATPB_LACCA (SWALL:Q03234) (470 aa) fasta scores: E(): 4.3e-82, 52.73% id in 457 aa | genbank | 52213388 | CAH39431.1 | 511 | 2638096 | 2639631 |
| 150207 | hypothetical | BPSS1954 | putative polymerase Similar to Azorhizobium caulinodans poly-beta-hydroxybutyrate polymerase PhbC SWALL:PHBC_AZOCA (SWALL:O66392) (583 aa) fasta scores: E(): 2e-73, 40.23% id in 517 aa, and to Methylobacterium extorquens poly(3-hydroxyalkanoate) polymerase PhaC SWALL:PHAC_METEX (SWALL:P52070) (605 aa) fasta scores: E(): 1e-72, 40.74% id in 535 aa | genbank | 52213389 | CAH39432.1 | 597 | 2640073 | 2641866 | |
| 150208 | hypothetical | BPSS1955 | putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein N-terminal region similar to Pseudomonas aeruginosa (R)-specific enoyl-CoA hydratase PhaJ1 or pa3302 SWALL:Q9LBK2 (EMBL:AB040025) (156 aa) fasta scores: E(): 1.1e-17, 44.44% id in 153 aa, and C-terminal region to Rhizobium meliloti phosphate acetyltransferase Pta SWALL:PTA_RHIME (SWALL:Q9X448) (316 aa) fasta scores: E(): 5.4e-55, 57.37% id in 305 aa | genbank | 52213390 | CAH39433.1 | 467 | 2641877 | 2643280 | |
| 150209 | hypothetical | BPSS1956 | putative acetate kinase Similar to the plasmid-borne Rhizobium meliloti acetate kinase AckA or rb0850 or smb21184 SWALL:ACK1_RHIME (SWALL:P58382) (392 aa) fasta scores: E(): 1.6e-64, 48.84% id in 389 aa, and to Brucella melitensis acetate kinase bmeii0880 SWALL:Q8YBL9 (EMBL:AE009722) (401 aa) fasta scores: E(): 4.4e-76, 53.5% id in 385 aa | genbank | 52213391 | CAH39434.1 | 392 | 2643277 | 2644455 | |
| 150210 | hypothetical | BPSS1957 | putative 6-phosphofructokinase Similar to Escherichia coli 6-phosphofructokinase isozyme 2 PfkB or b1723 SWALL:K6P2_ECOLI (SWALL:P06999) (309 aa) fasta scores: E(): 1.8e-31, 39.48% id in 309 aa, and to Salmonella typhimurium 6-phosphofructokinase II Pfkb or stm1326 SWALL:Q8ZPT5 (EMBL:AE008757) (310 aa) fasta scores: E(): 7e-32, 39.15% id in 309 aa | genbank | 52213392 | CAH39435.1 | 313 | 2645187 | 2646128 | |
| 150211 | hypothetical | BPSS1958 | conserved hypothetical protein Similar to Ralstonia solanacearum hypothetical protein rsc0189 or rs00621 SWALL:Q8Y2Z2 (EMBL:AL646057) (215 aa) fasta scores: E(): 1e-29, 46.75% id in 216 aa, and very low similarity to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 0.00021, 31.72% id in 145 aa | genbank | 52213393 | CAH39436.1 | 215 | 2646621 | 2647268 | |
| 150212 | cdd | hypothetical | BPSS1959 | cytidine deaminase Similar to Bacillus subtilis cytidine deaminase Cdd SWALL:CDD_BACSU (SWALL:P19079) (136 aa) fasta scores: E(): 3.4e-25, 55.9% id in 127 aa, and to Thermoanaerobacter tengcongensis cytidine deaminase tte0462 SWALL:Q8RCG7 (EMBL:AE013017) (135 aa) fasta scores: E(): 6.1e-27, 58.4% id in 125 aa | genbank | 52213394 | CAH39437.1 | 130 | 2647883 | 2648275 |
| 150213 | deoA | hypothetical | BPSS1960 | thymidine phosphorylase Similar to Escherichia coli thymidine phosphorylase DeoA or Tpp or Ttg or b4382 SWALL:TYPH_ECOLI (SWALL:P07650) (440 aa) fasta scores: E(): 3.4e-83, 56.45% id in 434 aa, and to Shewanella oneidensis thymidine phosphorylase so1218 SWALL:AAN54286 (EMBL:AE015566) (443 aa) fasta scores: E(): 1.6e-87, 60.41% id in 437 aa | genbank | 52213395 | CAH39438.1 | 440 | 2648584 | 2649906 |
| 150214 | hypothetical | BPSS1961 | hypothetical protein No significant database matches | genbank | 52213396 | CAH39439.1 | 59 | 2650594 | 2650773 | |
| 150215 | deoC | hypothetical | BPSS1962 | deoxyribose-phosphate aldolase Similar to Escherichia coli, and Escherichia coli O6 deoxyribose-phosphate aldolase DeoC or Dra or ThyR or b4381 or c5465 SWALL:DEOC_ECOLI (SWALL:P00882) (259 aa) fasta scores: E(): 7.9e-44, 53.9% id in 256 aa, and to Yersinia pestis deoxyribose-phosphate aldolase 2 DeoC2 or ypo0436 or y3743 SWALL:Q8ZIQ4 (EMBL:AJ414142) (265 aa) fasta scores: E(): 1.2e-44, 54.86% id in 257 aa | genbank | 52213397 | CAH39440.1 | 260 | 2651073 | 2651855 |
| 150216 | hypothetical | BPSS1963 | putative nucleoside transport related membrane protein Similar to Yersinia pestis putative Na+ dependent nucleoside transporter-family protein ypo0435 SWALL:Q8ZIQ5 (EMBL:AJ414142) (423 aa) fasta scores: E(): 3.7e-85, 57.68% id in 423 aa, and to Escherichia coli hypothetical transport protein YeiM or b2164 SWALL:YEIM_ECOLI (SWALL:P33024) (416 aa) fasta scores: E(): 1.3e-81, 55.18% id in 424 aa | genbank | 52213398 | CAH39441.1 | 424 | 2651869 | 2653143 | |
| 150217 | hypothetical | BPSS1964 | conserved hypothetical protein Similar to Pseudomonas aeruginosa hypothetical protein pa3036 SWALL:Q9HZH2 (EMBL:AE004728) (310 aa) fasta scores: E(): 2.6e-45, 49.19% id in 311 aa, and to Rhizobium meliloti hypothetical protein rb0009 or smb20006 SWALL:Q92XF2 (EMBL:AL603642) (317 aa) fasta scores: E(): 3.5e-41, 48.14% id in 297 aa. Note: C-terminal region presents no simi;arities to any of the database macthes and contains repeat regions | genbank | 52213399 | CAH39442.1 | 417 | 2653661 | 2654914 | |
| Single chain protein id | Protein name | Protein type | Locus tag | Description / User comment | Database name | Database id | Genbank accession | Length | Start on contig / cds translation | End on contig / cds translation |
| 150218 | hypothetical | BPSS1965 | putative glutathione S-transferase protein Similar to Pseudomonas putida glutathione S-transferase family protein pp1162 SWALL:AAN66786 (EMBL:AE016778) (209 aa) fasta scores: E(): 5.7e-46, 63.18% id in 201 aa, and to Rhizobium leguminosarum GstA protein SWALL:GSTA_RHILE (SWALL:Q52828) (203 aa) fasta scores: E(): 1.6e-41, 57.5% id in 200 aa | genbank | 52213400 | CAH39443.1 | 214 | 2655043 | 2655687 |