Ventral anterior homeobox containing gene 1 (Vax1)

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Finding cDNAs

UGID:261730 UniGene Mm.23801 Mus musculus (mouse) Vax1

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Ventral anterior homeobox containing gene 1 (Vax1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_033527.1	ventral anterior homeobox containing gene 1	M. musculus	100.0	337
NP_001106175.1	ventral anterior homeobox 1 isoform a	H. sapiens	96.7	333
NP_001079149.1	homeobox protein	X. laevis	75.2	294
NP_919391.2	ventral anterior homeobox 1	D. rerio	72.9	316

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	brain; embryonic tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	19
Map position:	19 D3\|19 53.5 cM
UniSTS entry:		(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

BC111818.1	Mus musculus ventral anterior homeobox containing gene 1, mRNA (cDNA clone MGC:130490 IMAGE:40044698), complete cds	P
BC119455.1	Mus musculus ventral anterior homeobox containing gene 1, mRNA (cDNA clone IMAGE:40044688)	P
AF064554.1	Mus musculus ventral anterior homeobox-containing protein 1 (Vax1) mRNA, complete cds	P
NM_009501.1	Mus musculus ventral anterior homeobox containing gene 1 (Vax1), mRNA	P

EST sequences (7)

CA751967.1	Clone IMAGE:6832221	brain	5' read
CX216853.1		brain	5' read	P
CJ057439.1	Clone A230094K21	brain	5' read
CJ059082.1	Clone A830020C12	brain	5' read
BB655233.1	Clone D030044M09	embryonic tissue	5' read
BQ180806.1	Clone IMAGE:5706335	brain	5' read
CA327569.1	Clone IMAGE:6826651	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria