R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
WARNING: Descriptions of 1352 database sequences were not reported due to the
limiting value of parameter V = 50.
>gi|6598752|gb|AAD26882.2|AC007290_1 (AC007290) putative chromosome associated
protein [Arabidopsis thaliana]
Length = 1163
Frame 3 hits (HSPs): ________ _________
__________________________________________________
Database sequence: | | | | | | | | | 1163
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 588 (207.0 bits), Expect = 4.0e-55, P = 4.0e-55
Identities = 117/178 (65%), Positives = 148/178 (83%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
TNL+RR EL+A I+S D DSL + A +K QEL DAK+ V++A +L+SV +SI+++T+Q
Sbjct: 783 TNLKRRITELQATIASIDDDSLPSSAGTKEQELDDAKLSVNEAAKELKSVCDSIDEKTKQ 842
Query: 186 IKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDA 365
IKKIKDE KLK+LED+ + LQ+ K+LE+L S +NT AK++EY KKIR LGPL+SDA
Sbjct: 843 IKKIKDEKAKLKTLEDDCKGTLQDLDKKLEELFSLRNTLLAKQDEYTKKIRGLGPLSSDA 902
Query: 366 FEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGD 539
F+ Y+R+NIK+L KMLHRC+EQLQQFSHVNKKALDQY+NFTEQREELQ RQAELDAGD
Sbjct: 903 FDTYKRKNIKELQKMLHRCSEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGD 960
Score = 93 (32.7 bits), Expect = 1.8, P = 0.84
Identities = 34/173 (19%), Positives = 83/173 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSADA-DSLVADAESKWQELS-DAKILVDDAIGQLRSVTESINDRTR 182
+L+ +EL+ + + ++ A K +L D K D G ++S +++
Sbjct: 273 SLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQDRITGNIQSKNDALEQLNT 332
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
++++D L +L++++ YE ++ ++ + +++ + T + Y K+ R
Sbjct: 333 VEREMQDSLRELEAIKPLYESQVDKENQTSKRINELEKTLSIL---YQKQGRATQFSNKA 389
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
A + + R+ I+DL ++L Q Q+ + + L + TE+ E ++K + E+
Sbjct: 390 ARDKWLRKEIEDLKRVLDSNTVQEQK---LQDEILRLNTDLTERDEHIKKHEVEI 441
>gi|3005929|emb|CAA06289.1| (AJ005015) SMC-like protein [Homo sapiens]
Length = 391
Frame 3 hits (HSPs): _______________________
__________________________________________________
Database sequence: | | | | 391
0 150 300
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 3.9e-27, P = 3.9e-27
Identities = 65/176 (36%), Positives = 105/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 9 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 68
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 69 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 128
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 129 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 184
>gi|6681065 ref|NP_031816.1| chondroitin sulfate proteoglycan 6 [Mus musculus]
>gi|2564278|emb|CAA75400.1| (Y15128) leucine zipper protein [Mus
musculus]
Length = 485
Frame 3 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | 485
0 150 300 450
Plus Strand HSPs:
Score = 313 (110.2 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 65/176 (36%), Positives = 104/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 299 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 358
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 359 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 418
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E L KRQ ELD G
Sbjct: 419 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKERLIKRQEELDRG 474
>gi|12735421 ref|XP_011875.1| chondroitin sulfate proteoglycan 6 (bamacan)
[Homo sapiens]
Length = 514
Frame 3 hits (HSPs): __________________
__________________________________________________
Database sequence: | | | | | 514
0 150 300 450
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 1.0e-26, P = 1.0e-26
Identities = 65/176 (36%), Positives = 105/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 132 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 191
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 192 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 251
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 252 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 307
>gi|4894360|gb|AAD32447.1|AF067163_1 (AF067163) bamacan homolog [Homo sapiens]
Length = 681
Frame 3 hits (HSPs): ______________
__________________________________________________
Database sequence: | | | | | | 681
0 150 300 450 600
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 65/176 (36%), Positives = 105/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 299 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 358
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 359 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 418
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 419 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 474
>gi|4885399 ref|NP_005436.1| chondroitin sulfate proteoglycan 6 (bamacan);
human chromosome-associated polypeptide (bamacan) [Homo sapiens]
>gi|3089368|gb|AAC14893.1| (AF020043) chromosome-associated
polypeptide [Homo sapiens]
Length = 1217
Frame 3 hits (HSPs): ____________ ________
__________________________________________________
Database sequence: | | | | | | | | || 1217
0 150 300 450 600 750 900 1050 1200
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 9.4e-26, P = 9.4e-26
Identities = 65/176 (36%), Positives = 105/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 835 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 894
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 895 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 954
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 955 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 1010
Score = 90 (31.7 bits), Expect = 4.4, P = 0.99
Identities = 45/172 (26%), Positives = 79/172 (45%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVT-ESINDRTRQIKKIKDELNKLKSLED 233
DA + D E + +EL + + QL + E I RT+ K KD ++L +
Sbjct: 262 DARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSE 321
Query: 234 EYERKLQEDAKELEQLQSKKNTYAAKEEEY--AKKIRELGPLTSDAFEAYRRRNIKDLHK 407
+ +R L+E K LE+++ K+ A E ++ K+ E G + +A + R DL+
Sbjct: 322 QRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERG--IARLAQATQERT--DLYA 377
Query: 408 MLHR-----CNEQLQQFSHVNKKALDQYINFTEQR-EELQKRQAELDAGDRLNLMQ 557
R E+ ++ K+LDQ IN +++ + K + +A NL Q
Sbjct: 378 KQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQ 433
Score = 89 (31.3 bits), Expect = 5.7, P = 1.0
Identities = 36/184 (19%), Positives = 87/184 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSA--DADSLVADAESKWQELSD----AKILVDDAIGQLRSVTESIN 170
++ R+ +EL+ IS+ + + L A+ + + ++ + AK L D+ G +
Sbjct: 269 DIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLK 328
Query: 171 DRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGP 350
+R + ++KI+++ +L E ++ +++ + + +L + + YAK+ R
Sbjct: 329 ERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQE---RTDLYAKQGRGSQF 385
Query: 351 LTSDAFEAYRRRNIKDLHKMLHRCNEQLQQF------SHVNK-KALDQYINFTEQREELQ 509
+ + + + ++ +K L + ++ Q+ + NK K L+QY + E++
Sbjct: 386 TSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVK 445
Query: 510 KRQAELD 530
R ELD
Sbjct: 446 ARVEELD 452
Score = 88 (31.0 bits), Expect = 7.4, P = 1.0
Identities = 38/172 (22%), Positives = 75/172 (43%), Frame = +3
Query: 66 SLVADAESKWQELSDAKILVDDAIGQLRSVTESIN-----DRTRQIKKI---KDELNKLK 221
SL+ + E K +++++ +++ + L E + D+ R+ + ELN+ +
Sbjct: 177 SLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETR 236
Query: 222 SLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS------DAFEAYRR 383
+ DE K + ++ QL+ + K E+ +++REL S + A R+
Sbjct: 237 AKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQ 296
Query: 384 RNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
IK K+ + + +L S K+ L + E+ EE QK AE +
Sbjct: 297 EQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETE 348
>gi|4689090|gb|AAD27754.1|AF047601_1 (AF047601) SMCD [Mus musculus]
>gi|5326862|gb|AAD42073.1|AF141294_1 (AF141294) bamacan [Mus
musculus]
Length = 1217
Frame 3 hits (HSPs): ____________ ________
__________________________________________________
Database sequence: | | | | | | | | || 1217
0 150 300 450 600 750 900 1050 1200
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 9.4e-26, P = 9.4e-26
Identities = 65/176 (36%), Positives = 105/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 835 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 894
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 895 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 954
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 955 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 1010
Score = 90 (31.7 bits), Expect = 4.4, P = 0.99
Identities = 45/172 (26%), Positives = 79/172 (45%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVT-ESINDRTRQIKKIKDELNKLKSLED 233
DA + D E + +EL + + QL + E I RT+ K KD ++L +
Sbjct: 262 DARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSE 321
Query: 234 EYERKLQEDAKELEQLQSKKNTYAAKEEEY--AKKIRELGPLTSDAFEAYRRRNIKDLHK 407
+ +R L+E K LE+++ K+ A E ++ K+ E G + +A + R DL+
Sbjct: 322 QRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERG--IARLAQATQERT--DLYA 377
Query: 408 MLHR-----CNEQLQQFSHVNKKALDQYINFTEQR-EELQKRQAELDAGDRLNLMQ 557
R E+ ++ K+LDQ IN +++ + K + +A NL Q
Sbjct: 378 KQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQ 433
Score = 89 (31.3 bits), Expect = 5.7, P = 1.0
Identities = 36/184 (19%), Positives = 87/184 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSA--DADSLVADAESKWQELSD----AKILVDDAIGQLRSVTESIN 170
++ R+ +EL+ IS+ + + L A+ + + ++ + AK L D+ G +
Sbjct: 269 DIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLK 328
Query: 171 DRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGP 350
+R + ++KI+++ +L E ++ +++ + + +L + + YAK+ R
Sbjct: 329 ERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQE---RTDLYAKQGRGSQF 385
Query: 351 LTSDAFEAYRRRNIKDLHKMLHRCNEQLQQF------SHVNK-KALDQYINFTEQREELQ 509
+ + + + ++ +K L + ++ Q+ + NK K L+QY + E++
Sbjct: 386 TSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVK 445
Query: 510 KRQAELD 530
R ELD
Sbjct: 446 ARVEELD 452
Score = 88 (31.0 bits), Expect = 7.4, P = 1.0
Identities = 38/172 (22%), Positives = 75/172 (43%), Frame = +3
Query: 66 SLVADAESKWQELSDAKILVDDAIGQLRSVTESIN-----DRTRQIKKI---KDELNKLK 221
SL+ + E K +++++ +++ + L E + D+ R+ + ELN+ +
Sbjct: 177 SLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETR 236
Query: 222 SLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS------DAFEAYRR 383
+ DE K + ++ QL+ + K E+ +++REL S + A R+
Sbjct: 237 AKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQ 296
Query: 384 RNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
IK K+ + + +L S K+ L + E+ EE QK AE +
Sbjct: 297 EQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETE 348
>gi|4235255|gb|AAD13142.1| (AF072713) SMC3 protein [Bos taurus]
Length = 1218
Frame 3 hits (HSPs): ____________ ________
__________________________________________________
Database sequence: | | | | | | | | || 1218
0 150 300 450 600 750 900 1050 1200
Plus Strand HSPs:
Score = 314 (110.5 bits), Expect = 9.4e-26, P = 9.4e-26
Identities = 65/176 (36%), Positives = 105/176 (59%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NLR+R ++E ++ + EL V D + + + SI+ I
Sbjct: 835 NLRKRLDQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGI 894
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L +AF
Sbjct: 895 KELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAF 954
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
E Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 955 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 1010
Score = 90 (31.7 bits), Expect = 4.4, P = 0.99
Identities = 45/172 (26%), Positives = 79/172 (45%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVT-ESINDRTRQIKKIKDELNKLKSLED 233
DA + D E + +EL + + QL + E I RT+ K KD ++L +
Sbjct: 262 DARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSE 321
Query: 234 EYERKLQEDAKELEQLQSKKNTYAAKEEEY--AKKIRELGPLTSDAFEAYRRRNIKDLHK 407
+ +R L+E K LE+++ K+ A E ++ K+ E G + +A + R DL+
Sbjct: 322 QRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERG--IARLAQATQERT--DLYA 377
Query: 408 MLHR-----CNEQLQQFSHVNKKALDQYINFTEQR-EELQKRQAELDAGDRLNLMQ 557
R E+ ++ K+LDQ IN +++ + K + +A NL Q
Sbjct: 378 KQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQ 433
Score = 89 (31.3 bits), Expect = 5.7, P = 1.0
Identities = 36/184 (19%), Positives = 87/184 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSA--DADSLVADAESKWQELSD----AKILVDDAIGQLRSVTESIN 170
++ R+ +EL+ IS+ + + L A+ + + ++ + AK L D+ G +
Sbjct: 269 DIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLK 328
Query: 171 DRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGP 350
+R + ++KI+++ +L E ++ +++ + + +L + + YAK+ R
Sbjct: 329 ERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQE---RTDLYAKQGRGSQF 385
Query: 351 LTSDAFEAYRRRNIKDLHKMLHRCNEQLQQF------SHVNK-KALDQYINFTEQREELQ 509
+ + + + ++ +K L + ++ Q+ + NK K L+QY + E++
Sbjct: 386 TSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVK 445
Query: 510 KRQAELD 530
R ELD
Sbjct: 446 ARVEELD 452
Score = 88 (31.0 bits), Expect = 7.4, P = 1.0
Identities = 38/172 (22%), Positives = 75/172 (43%), Frame = +3
Query: 66 SLVADAESKWQELSDAKILVDDAIGQLRSVTESIN-----DRTRQIKKI---KDELNKLK 221
SL+ + E K +++++ +++ + L E + D+ R+ + ELN+ +
Sbjct: 177 SLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETR 236
Query: 222 SLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS------DAFEAYRR 383
+ DE K + ++ QL+ + K E+ +++REL S + A R+
Sbjct: 237 AKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQ 296
Query: 384 RNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
IK K+ + + +L S K+ L + E+ EE QK AE +
Sbjct: 297 EQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETE 348
>gi|1785540|gb|AAB96342.1| (U82626) basement membrane-associated chondroitin
proteoglycan Bamacan [Rattus norvegicus]
Length = 1191
Frame 3 hits (HSPs): ____________ ________
__________________________________________________
Database sequence: | | | | | | | | | 1191
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 312 (109.8 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 64/176 (36%), Positives = 111/176 (63%), Frame = +3
Query: 9 NLRRRKQELEAVISS---ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRT 179
NLR+R ++E ++ + +++ S+ + ++ V D + + + SI+
Sbjct: 835 NLRKRLDQVEQELNELRETEGGTVLTATTSQLEAINKR---VKDTMARSEDLDNSIDKTE 891
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
IK+++ + + K++E E+ + D KELE++ +++ K+EE KKIRELG L
Sbjct: 892 AGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQ 951
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
+AFE Y+ ++K L + L +CN +L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G
Sbjct: 952 EAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRG 1010
Score = 90 (31.7 bits), Expect = 4.3, P = 0.99
Identities = 45/172 (26%), Positives = 79/172 (45%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVT-ESINDRTRQIKKIKDELNKLKSLED 233
DA + D E + +EL + + QL + E I RT+ K KD ++L +
Sbjct: 262 DARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSE 321
Query: 234 EYERKLQEDAKELEQLQSKKNTYAAKEEEY--AKKIRELGPLTSDAFEAYRRRNIKDLHK 407
+ +R L+E K LE+++ K+ A E ++ K+ E G + +A + R DL+
Sbjct: 322 QRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEERG--IARLAQATQERT--DLYA 377
Query: 408 MLHR-----CNEQLQQFSHVNKKALDQYINFTEQR-EELQKRQAELDAGDRLNLMQ 557
R E+ ++ K+LDQ IN +++ + K + +A NL Q
Sbjct: 378 KQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQ 433
Score = 89 (31.3 bits), Expect = 5.6, P = 1.0
Identities = 36/184 (19%), Positives = 87/184 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSA--DADSLVADAESKWQELSD----AKILVDDAIGQLRSVTESIN 170
++ R+ +EL+ IS+ + + L A+ + + ++ + AK L D+ G +
Sbjct: 269 DIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLLK 328
Query: 171 DRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGP 350
+R + ++KI+++ +L E ++ +++ + + +L + + YAK+ R
Sbjct: 329 ERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQE---RTDLYAKQGRGSQF 385
Query: 351 LTSDAFEAYRRRNIKDLHKMLHRCNEQLQQF------SHVNK-KALDQYINFTEQREELQ 509
+ + + + ++ +K L + ++ Q+ + NK K L+QY + E++
Sbjct: 386 TSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYNKLDQDLNEVK 445
Query: 510 KRQAELD 530
R ELD
Sbjct: 446 ARVEELD 452
Score = 88 (31.0 bits), Expect = 7.2, P = 1.0
Identities = 38/172 (22%), Positives = 75/172 (43%), Frame = +3
Query: 66 SLVADAESKWQELSDAKILVDDAIGQLRSVTESIN-----DRTRQIKKI---KDELNKLK 221
SL+ + E K +++++ +++ + L E + D+ R+ + ELN+ +
Sbjct: 177 SLMKETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETR 236
Query: 222 SLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS------DAFEAYRR 383
+ DE K + ++ QL+ + K E+ +++REL S + A R+
Sbjct: 237 AKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQ 296
Query: 384 RNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
IK K+ + + +L S K+ L + E+ EE QK AE +
Sbjct: 297 EQIKQRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETE 348
>gi|7293243|gb|AAF48625.1| (AE003502) Cap gene product [Drosophila
melanogaster]
Length = 1211
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | | | || 1211
0 150 300 450 600 750 900 1050 1200
Plus Strand HSPs:
Score = 254 (89.4 bits), Expect = 2.3e-19, P = 2.3e-19
Identities = 58/178 (32%), Positives = 100/178 (56%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NL RR+ EL + + + EL A+ + L + + + + +
Sbjct: 846 NLFRRRDELIQALQEISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQ 905
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELG--PLTSD 362
K+++ EL E E E L +D+K+LE+ +K+N K +E +KI LG PL
Sbjct: 906 KELQQELETHVRKEKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLGAVPLVDP 965
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDR 542
+ Y R ++K++ K L + N+ L++++HVNKKALDQ+++F+EQ+E+L +R+ ELD GD+
Sbjct: 966 S---YTRMSLKNIFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQ 1022
>gi|7447790|pir||S70553 chromosome-associated protein - fruit fly (Drosophila
melanogaster) >gi|1335781|gb|AAC47078.1| (U30492) Cap [Drosophila
melanogaster]
Length = 1231
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | | 1231
0 150 300 450 600 750 900 1050 1200
Plus Strand HSPs:
Score = 254 (89.4 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 58/178 (32%), Positives = 100/178 (56%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NL RR+ EL + + + EL A+ + L + + + + +
Sbjct: 866 NLFRRRDELIQALQEISVEDRKRKLNNCKTELVSAEKRIKKVNSDLEEIEKRVMEAVQLQ 925
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELG--PLTSD 362
K+++ EL E E E L +D+K+LE+ +K+N K +E +KI LG PL
Sbjct: 926 KELQQELETHVRKEKEAEENLNKDSKQLEKWSTKENMLNEKIDECTEKIASLGAVPLVDP 985
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDR 542
+ Y R ++K++ K L + N+ L++++HVNKKALDQ+++F+EQ+E+L +R+ ELD GD+
Sbjct: 986 S---YTRMSLKNIFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQ 1042
>gi|2133266|pir||S65799 chromosome scaffold protein sudA - Emericella nidulans
>gi|1103893|gb|AAB42143.1| (U40146) chromosome scaffold protein
[Aspergillus nidulans]
Length = 1211
Frame 3 hits (HSPs): ________
Annotated Domains: _ __
__________________________________________________
Database sequence: | | | | | | | | || 1211
0 150 300 450 600 750 900 1050 1200
__________________
Annotated Domains:
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 32..39
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 741..762
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 748..769
__________________
Plus Strand HSPs:
Score = 232 (81.7 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 55/178 (30%), Positives = 96/178 (53%), Frame = +3
Query: 9 NLRRRKQEL---EAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRT 179
NL R +L +A I+ D + + + + + L+ K+L D +L V ES+
Sbjct: 837 NLNPRLDQLLAQDADIADEDGQGNIKETQREQKRLT--KVL-DKLAQRLAQVDESMEQAN 893
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
++ ++ + + +E + +++ + +E+ KK + E A IR+LG L
Sbjct: 894 SRVTELTQRNAESRRELEELAKSIEKHQRRMEKSMQKKAALTKQAAECAANIRDLGVLPD 953
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGD 539
+AF Y+ + + K LH+ NE L++++HVNKKA +QY NFT+QRE L R+ ELDA
Sbjct: 954 EAFTKYKNTDSNTVVKKLHKVNEALKKYAHVNKKAFEQYNNFTKQRETLTSRREELDASQ 1013
Query: 540 R 542
+
Sbjct: 1014 K 1014
Score = 205 (72.2 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 54/181 (29%), Positives = 94/181 (51%), Frame = +3
Query: 9 NLRRRKQEL---EAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRT 179
NL R +L +A I+ D + + + + + L+ K+L D +L V ES+
Sbjct: 837 NLNPRLDQLLAQDADIADEDGQGNIKETQREQKRLT--KVL-DKLAQRLAQVDESMEQAN 893
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
++ ++ + + +E + +++ + +E+ KK + E A IR+LG L
Sbjct: 894 SRVTELTQRNAESRRELEELAKSIEKHQRRMEKSMQKKAALTKQAAECAANIRDLGVLPD 953
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD--- 530
+AF Y+ + + K LH+ NE L++++HVNKKA +QY NFT+QRE L R+ ELD
Sbjct: 954 EAFTKYKNTDSNTVVKKLHKVNEALKKYAHVNKKAFEQYNNFTKQRETLTSRREELDASQ 1013
Query: 531 ---- 530
Sbjct: 1014 KSID 1017
>gi|7492474|pir||T37503 probable chromosome-associated protein - fission yeast
(Schizosaccharomyces pombe) >gi|2661614|emb|CAA15722.1| (AL009197)
putative chromosome-associated protein [Schizosaccharomyces pombe]
Length = 1194
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | 1194
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 225 (79.2 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 58/174 (33%), Positives = 106/174 (60%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
TNL R+ L+A I S D+ + D ES+ + + + ++ + ++S + + ++ ++
Sbjct: 823 TNLYLRRNPLKAEIGS---DNRI-D-ESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQR 877
Query: 186 IK-KIKDELNKLKSLED---EYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPL 353
I +I D+ N+L+SLE+ E ++++DAK E+ +K++ A+++E +KI+ LG L
Sbjct: 878 INSEISDKRNELESLEELQHEVATRIEQDAKINERNAAKRSLLLARKKECNEKIKSLGVL 937
Query: 354 TSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
+AF Y + + K LH+ NE L+ + VNKKA +Q+ NFT+QR+ L R+ EL
Sbjct: 938 PEEAFIKYVSTSSNAIVKKLHKINEALKDYGSVNKKAYEQFNNFTKQRDSLLARREEL 995
>gi|7509916|pir||T31550 hypothetical protein Y47D3A.26 - Caenorhabditis elegans
Length = 1101
Frame 3 hits (HSPs): ________
__________________________________________________
Database sequence: | | | | | | | | | 1101
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 49/156 (31%), Positives = 82/156 (52%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE 236
D + AD + ++ +++ AK +D + Q R +S+ IK N+ S E
Sbjct: 754 DLEKQQADFQLQYDKIT-AK---EDEVKQKRE--DSLKKLILSRYSIKTRKNQF-SYEIS 806
Query: 237 YERKLQEDAKELEQLQSKKNT----YAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLH 404
++ + +E + K +T Y AK E+ +R LG L +D F ++ ++L
Sbjct: 807 DSEEVGAKREPIEHRKLKISTFCLEYRAKLEKVHSNMRLLGALPTDTFSKWQNVKPRELE 866
Query: 405 KMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAE 524
K L C +L+++ +VNKKALDQY+ + Q+EEL KR AE
Sbjct: 867 KKLLECVNELKKYENVNKKALDQYMTASSQKEELTKRMAE 906
>gi|6434485|emb|CAB57898.2| (AL117202) cDNA EST yk47d1.5 comes from this
gene~cDNA EST yk131d7.5 comes from this gene~cDNA EST yk59e5.5
comes from this gene~cDNA EST yk362b11.3 comes from this gene~cDNA
EST yk219f8.5 comes from this gene~cDNA EST yk248f1.5 comes from
this gene~cD>
Length = 1269
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 1269
0 500 1000
Plus Strand HSPs:
Score = 162 (57.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 49/156 (31%), Positives = 82/156 (52%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE 236
D + AD + ++ +++ AK +D + Q R +S+ IK N+ S E
Sbjct: 922 DLEKQQADFQLQYDKIT-AK---EDEVKQKRE--DSLKKLILSRYSIKTRKNQF-SYEIS 974
Query: 237 YERKLQEDAKELEQLQSKKNT----YAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLH 404
++ + +E + K +T Y AK E+ +R LG L +D F ++ ++L
Sbjct: 975 DSEEVGAKREPIEHRKLKISTFCLEYRAKLEKVHSNMRLLGALPTDTFSKWQNVKPRELE 1034
Query: 405 KMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAE 524
K L C +L+++ +VNKKALDQY+ + Q+EEL KR AE
Sbjct: 1035 KKLLECVNELKKYENVNKKALDQYMTASSQKEELTKRMAE 1074
>gi|6322387 ref|NP_012461.1| SMC chromosomal ATPase family member; Smc3p
[Saccharomyces cerevisiae] >gi|1352989|sp|P47037|SMC3_YEAST
CHROMOSOME SEGREGATION PROTEIN SMC3 (DA-BOX PROTEIN SMC3)
>gi|1078378|pir||S56850 SMC1 protein homolog YJL074c - yeast
(Saccharomyces cerevisiae) >gi|895899|emb|CAA61313.1| (X88851)
hypothetical protein [Saccharomyces cerevisiae]
>gi|1008231|emb|CAA89366.1| (Z49349) ORF YJL074c [Saccharomyces
cerevisiae] >gi|2570100|emb|CAA74655.1| (Y14278) Smc3
[Saccharomyces cerevisiae]
Length = 1230
Frame 3 hits (HSPs): _____________ __________
__________________________________________________
Database sequence: | | | | | | | | | | 1230
0 150 300 450 600 750 900 1050 1200
Plus Strand HSPs:
Score = 155 (54.6 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 46/174 (26%), Positives = 85/174 (48%), Frame = +3
Query: 21 RKQELEAVISSADADSLVADAESKWQELSDAKILVD----DAIGQLRSVTESINDRTRQI 188
++ +LE+ +S D+ + + + +EL K V+ +A+ +L +V I +
Sbjct: 847 QENDLESKMSEV-GDAFIFGLQDELKELQLEKESVEKQHENAVLELGTVQREIESLIAEE 905
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
K L K + + +KL K +E+ KK T + EE ++IRE+G L DA
Sbjct: 906 TNNKKLLEKANNQQRLLLKKLDNFQKSVEKTMIKKTTLVTRREELQQRIREIGLLPEDAL 965
Query: 369 -EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
+ L + L+ N ++ +VNK+A + + F E+R++L +R +ELD
Sbjct: 966 VNDFSDITSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLAERASELD 1020
Score = 116 (40.8 bits), Expect = 0.0032, P = 0.0032
Identities = 42/174 (24%), Positives = 82/174 (47%), Frame = +3
Query: 15 RRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKK 194
+ R Q LE V+ + + + + K +E KI ++ +G+L S + ++++K
Sbjct: 160 KERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEK 219
Query: 195 IKD-ELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKI--RE--LGPLTS 359
+ E N+ Y+R+L E ++E+L N E+Y +++ RE + ++
Sbjct: 220 YNELERNRKIYQFTLYDRELNEVINQMERLDGDYNNTVYSSEQYIQELDKREDMIDQVSK 279
Query: 360 --DAFEAYRR-RNIKDLHKMLHRCNEQLQQFSHVNKKALD--QYINFTEQREEL 506
+ EA + +N DL + R +E Q+ ++VN K D Q I E++ L
Sbjct: 280 KLSSIEASLKIKNATDLQQAKLRESEISQKLTNVNVKIKDVQQQIESNEEQRNL 333
Score = 94 (33.1 bits), Expect = 1.5, P = 0.78
Identities = 44/167 (26%), Positives = 86/167 (51%), Frame = +3
Query: 27 QELEAVISSADADSLVADAESKWQELSDA--KI-LVDDAIGQLRSVTESINDR--TRQIK 191
QE ++ +S + + L ES +E+S A K+ + DA+ + + +S+N ++ I
Sbjct: 791 QEFDSELSKEEKERL----ESLTKEISAAHNKLNITSDALEGITTTIDSLNAELESKLIP 846
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFE 371
+ D +K+ + D + LQ++ KEL QL+ + + E+++ + ELG + + E
Sbjct: 847 QENDLESKMSEVGDAFIFGLQDELKEL-QLEKE-----SVEKQHENAVLELGTVQRE-IE 899
Query: 372 AYRRRNIKDLHKMLHRCNEQ-------LQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
+ + K+L + N Q L F +K + + +REELQ+R E+
Sbjct: 900 SLIAEETNN-KKLLEKANNQQRLLLKKLDNFQKSVEKTMIKKTTLVTRREELQQRIREI 957
Score = 89 (31.3 bits), Expect = 5.8, P = 1.0
Identities = 35/138 (25%), Positives = 60/138 (43%), Frame = +3
Query: 96 QELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELN----KLKSLEDEYERKLQEDA 263
Q+L++ + + D Q+ S E N + +K+IK + KL + Y+ +E+A
Sbjct: 308 QKLTNVNVKIKDVQQQIESNEEQRNLDSATLKEIKSIIEQRKQKLSKILPRYQELTKEEA 367
Query: 264 K---ELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQL 434
+L LQ K+ K+ EYA+ + D + + I++L + NE
Sbjct: 368 MYKLQLASLQQKQRDLILKKGEYARF------KSKDERDTWIHSEIEELKSSIQNLNELE 421
Query: 435 QQFSHVNKKALDQYINFTEQREEL 506
Q QY E+ EEL
Sbjct: 422 SQLQMDRTSLRKQYSAIDEEIEEL 445
>gi|3328233|gb|AAC26808.1| (AF051785) 14S cohesin SMC3 subunit; SMC protein
[Xenopus laevis]
Length = 234
Frame 3 hits (HSPs): _________
__________________________________________________
Database sequence: | | | | | | 234
0 50 100 150 200
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 25/42 (59%), Positives = 37/42 (88%), Frame = +3
Query: 432 LQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDRLNLMQ 557
L+++SHVNKKALDQ++NF+EQ+E+L KRQ ELD G + ++M+
Sbjct: 1 LKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGHK-SIME 41
>gi|104776|pir||S24348 myosin heavy chain, embryonic and adult skeletal muscle
(clone Cemb2) - chicken (fragment)
Length = 955
Frame 3 hits (HSPs): ____________________ _________
Annotated Domains: ___
__________________________________________________
Database sequence: | | | | | | | | 955
0 150 300 450 600 750 900
__________________
Annotated Domains:
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 222..243
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 229..250
__________________
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/172 (23%), Positives = 88/172 (51%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
LR++ + A + D+L + +E S+ K+ +DD + SV+++ + + +
Sbjct: 211 LRKKHADSTAELGE-QIDNLQRVKQKLEKEKSELKMEIDDLASNMESVSKAKANLEKMCR 269
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFE 371
++D+L+K+KS E+E++R + + + + +LQ++ Y+ + EE I +L S +
Sbjct: 270 TLEDQLSKIKSKEEEHQRMINDLSTQRARLQTESGEYSRQVEEKDALISQL----SRGKQ 325
Query: 372 AYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
A+ ++ I++L + L + +H + A EQ EE Q+ + EL
Sbjct: 326 AFTQQ-IEELKRHLEEEIKAKNALAHALQSARHDCDLLREQYEEEQEAKGEL 376
Score = 101 (35.6 bits), Expect = 0.17, P = 0.16
Identities = 46/173 (26%), Positives = 78/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ EL K ++ ++++ E S+
Sbjct: 517 LKRENKNLQQEIS--DLTEQIAEGGKAIHELEKVKKQIEQEKSEIQAALEEAEASLEHEE 574
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +++ ELN++KS E +RK+ E +E++QL K+N +I E T
Sbjct: 575 GKILRLQLELNQVKS---EIDRKIAEKDEEIDQL--KRNHL---------RIVESMQSTL 620
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R ++ KM NE Q +H N+ A + N + L+ Q LD
Sbjct: 621 DAEIRSRNEALRLKKKMEGDLNEMEIQLNHANRVAAEAQKNLRNTQGVLKDTQIHLD 677
Score = 90 (31.7 bits), Expect = 3.3, P = 0.96
Identities = 51/188 (27%), Positives = 85/188 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKIL----VDDAIGQLRSVTESINDRT 179
L + K+ L+ D L A+ E K L+ AK VDD G L + D
Sbjct: 11 LTKEKKALQEAHQQT-LDDLQAE-EDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLE 68
Query: 180 RQIKKIKDEL----NKLKSLEDEYER---KLQEDAKELEQLQSKKNTYAAKEEEYAKKIR 338
R +K++ +L + + LE++ ++ KL++ E+ Q+QSK A + KKI+
Sbjct: 69 RAKRKLEGDLKMSQDTIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIK 128
Query: 339 ELGPLTSDA---FEAYRRRNIK-DLHKM-LHRCNEQLQQFSHVNKKALDQYINFTEQRE- 500
EL + EA R K + H+ L R E++ + A I+ ++RE
Sbjct: 129 ELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATATQIDMNKKREA 188
Query: 501 ELQKRQAELD 530
E QK + +L+
Sbjct: 189 EFQKMRRDLE 198
>gi|9800486|gb|AAF99314.1|AF272033_1 (AF272033) fast myosin heavy chain isoform
2 [Gallus gallus]
Length = 1944
Frame 3 hits (HSPs): ______________ _____
__________________________________________________
Database sequence: | | | | | 1944
0 500 1000 1500
Plus Strand HSPs:
Score = 134 (47.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 41/172 (23%), Positives = 88/172 (51%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
LR++ + A + D+L + +E S+ K+ +DD + SV+++ + + +
Sbjct: 1200 LRKKHADSTAELGE-QIDNLQRVKQKLEKEKSELKMEIDDLASNMESVSKAKANLEKMCR 1258
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFE 371
++D+L+K+KS E+E++R + + + + +LQ++ Y+ + EE I +L S +
Sbjct: 1259 TLEDQLSKIKSKEEEHQRMINDLSTQRARLQTESGEYSRQVEEKDALISQL----SRGKQ 1314
Query: 372 AYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
A+ ++ I++L + L + +H + A EQ EE Q+ + EL
Sbjct: 1315 AFTQQ-IEELKRHLEEEIKAKNALAHALQSARHDCDLLREQYEEEQEAKGEL 1365
Score = 104 (36.6 bits), Expect = 0.16, P = 0.15
Identities = 54/184 (29%), Positives = 97/184 (52%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DRT 179
L + K +L+ + A+AD+L ADAE + +L KI ++ I ++ E IN + T
Sbjct: 888 LVQEKNDLQLQVQ-AEADAL-ADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELT 945
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNT---YAAKEEEYAKKIRELG 347
+ +K++DE ++LK D+ E L + KE ++K KN AA +E AK +E
Sbjct: 946 AKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAALDETIAKLTKEKK 1005
Query: 348 PLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKR 515
L EA+++ + DL + N + + + ++ +D EQ R +L++
Sbjct: 1006 ALQ----EAHQQ-TLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERA 1059
Query: 516 QAELDAGDRLNLMQ 557
+ +L+ GD L + Q
Sbjct: 1060 KRKLE-GD-LKMSQ 1071
Score = 101 (35.6 bits), Expect = 0.37, P = 0.31
Identities = 46/173 (26%), Positives = 78/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ EL K ++ ++++ E S+
Sbjct: 1506 LKRENKNLQQEIS--DLTEQIAEGGKAIHELEKVKKQIEQEKSEIQAALEEAEASLEHEE 1563
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +++ ELN++KS E +RK+ E +E++QL K+N +I E T
Sbjct: 1564 GKILRLQLELNQVKS---EIDRKIAEKDEEIDQL--KRNHL---------RIVESMQSTL 1609
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R ++ KM NE Q +H N+ A + N + L+ Q LD
Sbjct: 1610 DAEIRSRNEALRLKKKMEGDLNEMEIQLNHANRVAAEAQKNLRNTQGVLKDTQIHLD 1666
Score = 90 (31.7 bits), Expect = 7.3, P = 1.0
Identities = 51/188 (27%), Positives = 85/188 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKIL----VDDAIGQLRSVTESINDRT 179
L + K+ L+ D L A+ E K L+ AK VDD G L + D
Sbjct: 1000 LTKEKKALQEAHQQT-LDDLQAE-EDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLE 1057
Query: 180 RQIKKIKDEL----NKLKSLEDEYER---KLQEDAKELEQLQSKKNTYAAKEEEYAKKIR 338
R +K++ +L + + LE++ ++ KL++ E+ Q+QSK A + KKI+
Sbjct: 1058 RAKRKLEGDLKMSQDTIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIK 1117
Query: 339 ELGPLTSDA---FEAYRRRNIK-DLHKM-LHRCNEQLQQFSHVNKKALDQYINFTEQRE- 500
EL + EA R K + H+ L R E++ + A I+ ++RE
Sbjct: 1118 ELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATATQIDMNKKREA 1177
Query: 501 ELQKRQAELD 530
E QK + +L+
Sbjct: 1178 EFQKMRRDLE 1187
>gi|10697129|emb|CAC12695.1| (AJ279087) putative structural maintenance of
chromosome 3 protein [Trypanosoma brucei]
Length = 1260
Frame 3 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 1260
0 500 1000
Plus Strand HSPs:
Score = 131 (46.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 37/145 (25%), Positives = 77/145 (53%), Frame = +3
Query: 102 LSDAKILVDDAIG----QLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKE 269
+++ K +DD I Q V +++ ++ + ++E+ KL+S E +QE ++
Sbjct: 857 ITNEKENLDDDISFNSQQANEVYRLLDEARKEKLRREEEVEKLRSGYLEALNSIQE-RRD 915
Query: 270 LEQLQSKKNTYAAKEEE-YAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFS 446
+ + + K + A+KIR+LG + +A E Y + + L + L CN+ ++++
Sbjct: 916 FDGRTLMQQAHCIKRRDGAAEKIRQLGVIPKEA-ETYSGLSREKLIQTLKECNKAAEKYA 974
Query: 447 HVNKKALDQYINFTEQREELQKRQAEL 527
H+N+KA+DQY E + L ++ +L
Sbjct: 975 HINRKAVDQYNTLMETKNGLVAQKEDL 1001
>gi|1339977|dbj|BAA12730.1| (D85138) skeletal myosin heavy chain [Thunnus
thynnus]
Length = 786
Frame 3 hits (HSPs): ____________ ___________
__________________________________________________
Database sequence: | | | | | | | 786
0 150 300 450 600 750
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 41/177 (23%), Positives = 89/177 (50%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
T+ RK++ ++V + D+L + +E S+ K+ +DD + +V +S + +
Sbjct: 38 TSASLRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKSKGNLEK 97
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
+ I+D+L++LK+ DE+ R+L + + +LQ++ ++ + EE + +L +
Sbjct: 98 MCRTIEDQLSELKAKNDEHVRQLNDLNGQRARLQTENGEFSRQIEEKDALVSQL----TR 153
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
+AY ++ I++L + + + +H + A EQ EE Q+ + EL G
Sbjct: 154 GKQAYTQQ-IEELKRHIEEEIKAKNALAHAVQSARHDCDLLREQYEEEQEAKGELQRG 210
Score = 105 (37.0 bits), Expect = 0.044, P = 0.043
Identities = 44/173 (25%), Positives = 81/173 (46%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
++R + L+ IS D + + EL AK V+ ++++ E ++
Sbjct: 348 MKRENKNLQQEIS--DLTEQIGETGKSIHELEKAKKHVETEKTEIQTALEEAEGTLEHEE 405
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +++ ELN++KS E +RKL E +E+EQ+ K+N+ +++ + T
Sbjct: 406 AKILRVQLELNQIKS---EVDRKLAEKDEEMEQI--KRNS---------QRVIDSMQSTL 451
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R ++ KM NE Q SH N++A + + +L+ Q LD
Sbjct: 452 DAEVRSRNDALRIKKKMEGDLNEMEIQLSHANRQATESQKQLRNVQGQLKDAQLHLD 508
>gi|7446606|pir||F71190 probable chromosome assembly protein - Pyrococcus
horikoshii >gi|3258234|dbj|BAA30917.1| (AP000007) 1179aa long
hypothetical chromosome assembly protein [Pyrococcus horikoshii]
Length = 1179
Frame 3 hits (HSPs): _________________
__________________________________________________
Database sequence: | | | | | | | | | 1179
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 35/143 (24%), Positives = 76/143 (53%), Frame = +3
Query: 123 VDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTY 302
++ + ++ ++ +IN+ +K + ++L KLK E E +++E K+ E+L+ K
Sbjct: 830 IEGLVNKINALKANINENEEALKSLTEKLEKLKKEEGEIYSRIEEQKKKKEELERKVAEL 889
Query: 303 AAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFS-HVNKKALDQYI 479
++E+ +++I+EL + + + RN L +L N QL+ FS V K D
Sbjct: 890 REEKEKISRRIQELR-IEVNTLKV---RN-SQLKSLLMEKNSQLKHFSKEVIKSIRDIPS 944
Query: 480 NFTEQREELQKRQAELDAGDRLNL 551
+ ++E++K + E+ A + +N+
Sbjct: 945 DLEGLKKEIEKMEEEIKALEPVNM 968
Score = 121 (42.6 bits), Expect = 0.00065, P = 0.00065
Identities = 44/172 (25%), Positives = 91/172 (52%), Frame = +3
Query: 12 LRRRKQELEAVIS--SADADSLVADAESKWQELSDA--KIL-VDDAIGQLRSVTESINDR 176
LR R ++E IS S D + L+ + ES E+ D+ KI +D+ I + + + R
Sbjct: 701 LRIRMSDVEKEISLISKDLEKLIKEEESLRSEIEDSERKIAEIDETISKKKDEVAKLKGR 760
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLT 356
+++K +D+L K +LE+ R++ E +E+E+ +K ++ E K+ L
Sbjct: 761 IERLEKRRDKLKK--ALENPEAREVTEKIREVEREIAKLREELSRVEG---KLESLNSRL 815
Query: 357 SDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
+D + +++ ++++ N L+ + N++AL + TE+ E+L+K + E+
Sbjct: 816 NDELIPRKASLEEEIEGLVNKINA-LKANINENEEALK---SLTEKLEKLKKEEGEI 868
Score = 100 (35.2 bits), Expect = 0.28, P = 0.25
Identities = 36/169 (21%), Positives = 83/169 (49%), Frame = +3
Query: 66 SLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYER 245
SL + E +++ K +++ L+S+TE + ++ +I + + K ++E ER
Sbjct: 825 SLEEEIEGLVNKINALKANINENEEALKSLTEKLEKLKKEEGEIYSRIEEQKKKKEELER 884
Query: 246 KLQE--DAKE-----LEQLQSKKNTYAAKEEEYAKKIRE----LGPLTSDAFEAYRR--R 386
K+ E + KE +++L+ + NT + + + E L + + ++ R
Sbjct: 885 KVAELREEKEKISRRIQELRIEVNTLKVRNSQLKSLLMEKNSQLKHFSKEVIKSIRDIPS 944
Query: 387 NIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQRE-ELQKRQAELDA 533
+++ L K + + E+++ VN KA++ + E+R EL+ ++ L+A
Sbjct: 945 DLEGLKKEIEKMEEEIKALEPVNMKAIEDF-EVVERRYLELKSKRERLEA 993
Score = 88 (31.0 bits), Expect = 7.1, P = 1.0
Identities = 36/157 (22%), Positives = 78/157 (49%), Frame = +3
Query: 102 LSDAKILVDDAIGQLRSVTES----INDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKE 269
L D K L + + LR + ES +N ++K ++++ +L+ + E+++ +K+
Sbjct: 660 LLDTKEL-KEKVENLRIMKESLEGEVNSLRVKLKALENQSFELRIRMSDVEKEISLISKD 718
Query: 270 LEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFE--AYRRRNIKDLHKMLHRCNEQLQ-- 437
LE+L ++ + ++ E+ +KI E+ S + A + I+ L K + + L+
Sbjct: 719 LEKLIKEEESLRSEIEDSERKIAEIDETISKKKDEVAKLKGRIERLEKRRDKLKKALENP 778
Query: 438 QFSHVNKKALDQYINFTEQREELQKRQAELDA-GDRLN 548
+ V +K + + REEL + + +L++ RLN
Sbjct: 779 EAREVTEKIREVEREIAKLREELSRVEGKLESLNSRLN 816
Score = 88 (31.0 bits), Expect = 7.1, P = 1.0
Identities = 43/170 (25%), Positives = 84/170 (49%), Frame = +3
Query: 18 RRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIG--QLRSVTESINDRTRQIK 191
R+ E++ IS + VA + + + L + + A+ + R VTE I + R+I
Sbjct: 738 RKIAEIDETISKKKDE--VAKLKGRIERLEKRRDKLKKALENPEAREVTEKIREVEREIA 795
Query: 192 KIKDELN----KLKSLE----DEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELG 347
K+++EL+ KL+SL DE + +E+E L +K N A E + ++ L
Sbjct: 796 KLREELSRVEGKLESLNSRLNDELIPRKASLEEEIEGLVNKINALKANINENEEALKSL- 854
Query: 348 PLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ E + K+ ++ R EQ ++ + +K + E++E++ +R EL
Sbjct: 855 ---TEKLEKLK----KEEGEIYSRIEEQKKKKEELERKVAE----LREEKEKISRRIQEL 903
Score = 87 (30.6 bits), Expect = 9.4, P = 1.0
Identities = 41/171 (23%), Positives = 74/171 (43%), Frame = +3
Query: 21 RKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIK 200
+K+E E + + E K EL + K + I +LR ++ R Q+K +
Sbjct: 862 KKEEGEIYSRIEEQKKKKEELERKVAELREEKEKISRRIQELRIEVNTLKVRNSQLKSLL 921
Query: 201 DELN-KLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
E N +LK E + +++ +LE L KK K EE K + + + FE
Sbjct: 922 MEKNSQLKHFSKEVIKSIRDIPSDLEGL--KKEI--EKMEEEIKALEPVNMKAIEDFEVV 977
Query: 378 RRR--NIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDA 533
RR +K + L + + +F +N+ ++ F + + + K +EL A
Sbjct: 978 ERRYLELKSKRERLEAEKDSIIEF--INEIEKEKKNVFMKTFDAIAKNFSELFA 1029
>gi|7514430|pir||A70387 conserved hypothetical protein aq_1006 - Aquifex
aeolicus >gi|2983515|gb|AAC07092.1| (AE000718) hypothetical protein
[Aquifex aeolicus]
Length = 978
Frame 3 hits (HSPs): _______ _______ _______________
__________________________________________________
Database sequence: | | | | | | | | 978
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 0.00010, P = 0.00010
Identities = 37/144 (25%), Positives = 77/144 (53%), Frame = +3
Query: 135 IGQLRS-VTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAK 311
+ +LR + E++ +R +++++++ E KL+ ++Y + L++ K+ E+ Q+K + +
Sbjct: 548 VEELRKEIPENLKERIKKLEELRIEKEKLEHKLNKYRKALEDRQKQKEEAQAKLHKAQTE 607
Query: 312 EEEYAKKIRELGPLTSDAFEAYRRRNIKD----LHKMLHRCNEQLQQFSHVNKKALDQYI 479
E +KIRE L + E YR ++D L + ++ N +LQ+ KK L ++
Sbjct: 608 LELLKEKIREKSRLVKEFKELYRVERLEDYEESLKEEINYINSKLQEIEEKEKK-LRKH- 665
Query: 480 NFTEQREELQKRQAELDA-GDRLNLMQ 557
F E K + EL A + +N ++
Sbjct: 666 -FEELSSRKSKLEGELSALNESINSLE 691
Score = 106 (37.3 bits), Expect = 0.043, P = 0.043
Identities = 47/169 (27%), Positives = 93/169 (55%), Frame = +3
Query: 24 KQELEAVISSA-DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESIN----DRTRQI 188
K+E+ + S + + ++ELS K ++ G+L ++ ESIN +R ++
Sbjct: 642 KEEINYINSKLQEIEEKEKKLRKHFEELSSRKSKLE---GELSALNESINSLEEERKEKL 698
Query: 189 KKIKD--ELNK---------LKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKI 335
K++ + E+ K L E E ERK++E + + L+ KK+ K +EY + I
Sbjct: 699 KELANIYEVAKSPREVVELYLGDKEAELERKIKEFEESFQSLKLKKSEIEEKLKEY-EGI 757
Query: 336 RELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKR 515
REL + + +E+ + + +++ HK L +L+ H+ ++ +++EELQK
Sbjct: 758 RELSDIKGE-YESVKTQ-LEEKHKKLGEVKRELE---HLGERL--------KRKEELQKE 804
Query: 516 QAELD 530
+EL+
Sbjct: 805 ISELE 809
Score = 93 (32.7 bits), Expect = 1.5, P = 0.78
Identities = 34/144 (23%), Positives = 68/144 (47%), Frame = +3
Query: 96 QELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELE 275
+EL + L + L E++ ++ + +KD K + ++ + L+E+ KEL+
Sbjct: 164 EELEKVRQLASETFKNLEGKREALK---KEYELLKDYTPTKKEVLEKTLKNLEEELKELK 220
Query: 276 QLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVN 455
+ + K K EE REL + + + + +++L K + + E+L+ FS
Sbjct: 221 ETEEKLRQELKKAEEKDSLERELSQVVT------KLKELENLEKEVEKLREKLE-FSR-- 271
Query: 456 KKALDQYINFTEQREELQKRQAEL 527
K A Y+ ++ EE+ K+ EL
Sbjct: 272 KVA--PYVPIAKRIEEIDKKLTEL 293
Score = 91 (32.0 bits), Expect = 2.6, P = 0.93
Identities = 31/121 (25%), Positives = 58/121 (47%), Frame = +3
Query: 174 RTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQS---KKNTYAAKEEEYAKKIREL 344
+ ++IK+I EL++L S E ER+ ++ +E E L K A+ EE +KI+EL
Sbjct: 344 KLQEIKEILKELSQLSSSLKEKEREYEQAKQEFEDLSERVEKGKKLVAETEEKLEKIKEL 403
Query: 345 GPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAE 524
+ R + +L + L E+ Q ++ +K ++ + EL++ + E
Sbjct: 404 FSEEEYTSLKMKERLLVELQRKLKELKEKEGQLENLTQKYKEKKKVHEKVLNELKELERE 463
Query: 525 L 527
L
Sbjct: 464 L 464
Score = 89 (31.3 bits), Expect = 4.5, P = 0.99
Identities = 46/174 (26%), Positives = 81/174 (46%), Frame = +3
Query: 12 LRRRKQELEAVISSADADS-LVADAESKW--QELSDAKILVDDAIGQLRSVTESINDRTR 182
L + + ELE + S LV + + + + L D + + + I + S + I ++ +
Sbjct: 601 LHKAQTELELLKEKIREKSRLVKEFKELYRVERLEDYEESLKEEINYINSKLQEIEEKEK 660
Query: 183 QIKKIKDELNKLKS-LEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+++K +EL+ KS LE E L E LE+ + +K A E AK RE+ L
Sbjct: 661 KLRKHFEELSSRKSKLEGELSA-LNESINSLEEERKEKLKELANIYEVAKSPREVVELYL 719
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDA 533
EA R IK+ + +L++ S + +K L +Y E EL + E ++
Sbjct: 720 GDKEAELERKIKEFEESFQSL--KLKK-SEIEEK-LKEY----EGIRELSDIKGEYES 769
>gi|2128791|pir||A64465 hypothetical protein MJ1322 - Methanococcus jannaschii
>gi|1591962|gb|AAB99331.1| (U67572) purine NTPase [Methanococcus
jannaschii]
Length = 1005
Frame 3 hits (HSPs): _____________________________
Annotated Domains: _ __ __
__________________________________________________
Database sequence: | | | | | | | | 1005
0 150 300 450 600 750 900
__________________
Annotated Domains:
PROSITE ATP_GTP_A: ATP/GTP-binding site motif A 32..39
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 196..217
PROSITE LEUCINE_ZIPPER: Leucine zipper pattern. 248..269
__________________
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 0.00011, P = 0.00011
Identities = 44/158 (27%), Positives = 78/158 (49%), Frame = +3
Query: 42 VISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES-INDRTRQIKKIKDELNKL 218
VI+ D ++ D +S+ + + A+ L SV E I +R ++I+ I NK
Sbjct: 598 VINGKPVDEILEDIKSQLNKFKNFYNQYLSAVSYLNSVDEEGIRNRIKEIENIVSGWNKE 657
Query: 219 KSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY------- 377
K E+ KL+ED +E+ +L+ K N KE+E + I L D ++ Y
Sbjct: 658 KCREEL--NKLREDEREINRLKDKLNELKNKEKELIE-IENRRSLKFDKYKEYLGLTEKL 714
Query: 378 -RRRNIKD-LHKMLHRCNEQLQQFSHV----NKKALDQYIN 482
+NIKD L ++ + CN ++ ++ NK+ ++ Y+N
Sbjct: 715 EELKNIKDGLEEIYNICNSKILAIDNIKRKYNKEDIEIYLN 755
Score = 116 (40.8 bits), Expect = 0.0025, P = 0.0025
Identities = 46/175 (26%), Positives = 83/175 (47%), Frame = +3
Query: 6 TNLRRRKQELEAVIS-SADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
+ LR K E + + + + D E K +E + DD I L ++ I D
Sbjct: 301 SRLRELKSHYEDYLKLTKQLEIIKGDIE-KLKEFINKSKYRDD-IDNLDTLLNKIKDEIE 358
Query: 183 QIKKIKDELNKLKSLEDEYER--KLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLT 356
+++ IKD L +LK+L +E E+ K + +E ++ K K EY K E L
Sbjct: 359 RVETIKDLLEELKNLNEEIEKIEKYKRICEECKEYYEKYLELEEKAVEYNKLTLEYITLL 418
Query: 357 SDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQR----EELQKRQAE 524
+ +NI DL R N+ L++ +++ ++++ + E++ E LQK + E
Sbjct: 419 QEKKSI--EKNINDLET---RINKLLEETKNIDIESIENSLKEIEEKKKVLENLQKEKIE 473
Query: 525 LD 530
L+
Sbjct: 474 LN 475
Score = 108 (38.0 bits), Expect = 0.025, P = 0.025
Identities = 40/179 (22%), Positives = 85/179 (47%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
L+ + +L V+ + + + D K++ L D ++ + +L+S E T+Q++
Sbjct: 262 LKILEYDLNTVVEARETLNRHKDEYEKYKSLVDEIRKIESRLRELKSHYEDYLKLTKQLE 321
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDA-- 365
IK ++ KLK ++ K ++D L+ L +K + E + EL L +
Sbjct: 322 IIKGDIEKLKEFINK--SKYRDDIDNLDTLLNKIKDEIERVETIKDLLEELKNLNEEIEK 379
Query: 366 FEAYRR--RNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGD 539
E Y+R K+ ++ E+ ++ NK L+ YI ++++ ++K +L+
Sbjct: 380 IEKYKRICEECKEYYEKYLELEEKAVEY---NKLTLE-YITLLQEKKSIEKNINDLET-- 433
Query: 540 RLN 548
R+N
Sbjct: 434 RIN 436
Score = 100 (35.2 bits), Expect = 0.23, P = 0.21
Identities = 34/157 (21%), Positives = 82/157 (52%), Frame = +3
Query: 78 DAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKL----KSL---EDE 236
D E + E + K+L + I +L ++ + +++K ++ +LN + ++L +DE
Sbjct: 226 DIEKLFNEWENKKLLYEKFINKLEERKRALELKNQELKILEYDLNTVVEARETLNRHKDE 285
Query: 237 YERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDA-----F--EAYRRRNIK 395
YE K + E+ +++S+ + E+Y K ++L + D F ++ R +I
Sbjct: 286 YE-KYKSLVDEIRKIESRLRELKSHYEDYLKLTKQLEIIKGDIEKLKEFINKSKYRDDID 344
Query: 396 DLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQK 512
+L +L++ +++++ + K L++ N E+ E+++K
Sbjct: 345 NLDTLLNKIKDEIERVETI-KDLLEELKNLNEEIEKIEK 382
Score = 91 (32.0 bits), Expect = 2.7, P = 0.93
Identities = 32/148 (21%), Positives = 70/148 (47%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
L++ EL+ V D K + ++ K +++ +L + + I + + I+
Sbjct: 488 LKKILDELKEVEGKCPLCKTPIDENKKMELINQHKTQLNNKYTELEEINKKIREIEKDIE 547
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL---GPLTSD 362
K+K E++K ++L+ L++ + ++E+L+ K Y + +E KKI G +
Sbjct: 548 KLKKEIDKEENLKTLKTLYLEKQS-QIEELELKLKNYKEQLDEINKKISNYVINGKPVDE 606
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVN 455
E + + L+K + N+ L S++N
Sbjct: 607 ILEDIKSQ----LNKFKNFYNQYLSAVSYLN 633
Score = 87 (30.6 bits), Expect = 7.9, P = 1.0
Identities = 40/138 (28%), Positives = 70/138 (50%), Frame = +3
Query: 147 RSVTESINDRTRQIKKIKDELNKLKS-----LEDEYERKLQEDA-KEL----EQLQSKKN 296
R + + R+I ++KD+LN+LK+ +E E R L+ D KE E+L+ KN
Sbjct: 660 REELNKLREDEREINRLKDKLNELKNKEKELIEIENRRSLKFDKYKEYLGLTEKLEELKN 719
Query: 297 TYAAKEEEYAKKIRELGPLTSDAFEA-YRRRNIKD-LHKMLHRCNEQL----QQFSHVNK 458
EE Y I L D + Y + +I+ L+ + N+++ ++ S++N+
Sbjct: 720 IKDGLEEIY--NICNSKILAIDNIKRKYNKEDIEIYLNNKILEVNKEINDIEERISYINQ 777
Query: 459 KALDQYINFTEQREELQKRQAE 524
K LD+ IN+ E+ + K E
Sbjct: 778 K-LDE-INYNEEEHKKIKELYE 797
>gi|5360748|dbj|BAA82145.1| (AB025261) myosin heavy chain 2b [Sus scrofa]
Length = 1937
Frame 3 hits (HSPs): ______________ _____
__________________________________________________
Database sequence: | | | | | 1937
0 500 1000 1500
Plus Strand HSPs:
Score = 127 (44.7 bits), Expect = 0.00015, P = 0.00015
Identities = 36/169 (21%), Positives = 89/169 (52%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD + +V+++ + + + +
Sbjct: 1195 RKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNMETVSKAKGNLEKMCRTL 1254
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ E+E++R + E + + +LQ++ ++ + +E + +L S +A+
Sbjct: 1255 EDQLSEVKTKEEEHQRLINELSAQKARLQTESGEFSRQLDEKEALVSQL----SRGKQAF 1310
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ I++L + L + +H + + EQ EE Q+ +AEL
Sbjct: 1311 TQQ-IEELKRQLEEETKAKSALAHAVQSSRHDCDLLREQYEEEQEAKAEL 1359
Score = 106 (37.3 bits), Expect = 0.093, P = 0.089
Identities = 52/184 (28%), Positives = 93/184 (50%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DRT 179
L + K +L+ + A+AD L ADAE + +L KI ++ I ++ E IN + T
Sbjct: 882 LMQEKNDLQLQVQ-AEADGL-ADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELT 939
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPLT 356
+ +K++DE ++LK D+ E L + KE ++K KN EE A + LT
Sbjct: 940 AKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL----TEEMAGLDENIAKLT 995
Query: 357 SD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKRQ 518
+ A + ++ + DL + N + + + ++ +D EQ R +L++ +
Sbjct: 996 KEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERAK 1054
Query: 519 AELDAGDRLNLMQ 557
+L+ GD L L Q
Sbjct: 1055 RKLE-GD-LKLAQ 1065
Score = 105 (37.0 bits), Expect = 0.12, P = 0.12
Identities = 46/173 (26%), Positives = 78/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ EL K ++ +L++ E S+
Sbjct: 1500 LKRENKNLQQEIS--DLTEQIAEGGKHIHELEKVKKQIEQEKSELQAALEEAEASLEHEE 1557
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +E++Q+ K+N E + T
Sbjct: 1558 GKILRIQLELNQVKS---EIDRKIAEKDEEIDQM--KRNHIRVVESMQS---------TL 1603
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R ++ KM NE Q +H N++A + N + L+ Q LD
Sbjct: 1604 DAEIRSRNDALRIKKKMEGDLNEMEIQLNHANRQATEAIRNLRNTQGVLKDTQLHLD 1660
Score = 91 (32.0 bits), Expect = 5.5, P = 1.0
Identities = 51/188 (27%), Positives = 83/188 (44%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKIL----VDDAIGQLRSVTESINDRT 179
L + K+ L+ D L A+ E K L+ AK VDD G L + D
Sbjct: 994 LTKEKKALQEAHQQT-LDDLQAE-EDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLE 1051
Query: 180 RQIKKIKDELN-------KLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIR 338
R +K++ +L +++ + + + KL++ E+ LQSK A + KKI+
Sbjct: 1052 RAKRKLEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQLQKKIK 1111
Query: 339 ELGPLTSDA---FEAYRRRNIK------DLHKMLHRCNEQLQQFSHVNKKALDQYINFTE 491
EL T + EA R K DL + L +E+L++ A I +
Sbjct: 1112 ELQARTEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGG----ATSAQIEMNK 1167
Query: 492 QRE-ELQKRQAELD 530
+RE E QK + +L+
Sbjct: 1168 KREAEFQKMRRDLE 1181
Score = 90 (31.7 bits), Expect = 7.3, P = 1.0
Identities = 44/163 (26%), Positives = 74/163 (45%), Frame = +3
Query: 63 DSLVADAESKWQELSDAKILVDDA---IGQLRSVTESINDRTRQIKKIKDELNKLKSLED 233
++L + ++ QE+SD + + I +L V + I +++ +E SLE
Sbjct: 1498 ETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQIEQEKSELQAALEEAEA--SLEH 1555
Query: 234 EYERKLQEDAKELEQLQSK-KNTYAAKEEEY--AKK--IRELGPLTSDAFEAYRRRN--I 392
E E K+ EL Q++S+ A K+EE K+ IR + + S R RN +
Sbjct: 1556 E-EGKILRIQLELNQVKSEIDRKIAEKDEEIDQMKRNHIRVVESMQSTLDAEIRSRNDAL 1614
Query: 393 KDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
+ KM NE Q +H N++A + N + L+ Q LD
Sbjct: 1615 RIKKKMEGDLNEMEIQLNHANRQATEAIRNLRNTQGVLKDTQLHLD 1660
>gi|127772|sp||MYSS_RABIT_2 [Segment 2 of 2] MYOSIN HEAVY CHAIN, SKELETAL
MUSCLE
Length = 826
Frame 3 hits (HSPs): __________ ___________
__________________________________________________
Database sequence: | | | | | | | 826
0 150 300 450 600 750
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00016, P = 0.00016
Identities = 36/169 (21%), Positives = 88/169 (52%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD G + +V+++ + + + +
Sbjct: 84 RKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLAGNMETVSKAKGNLEKMCRTL 143
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ E+E++R + E + + +L ++ ++ + +E + +L S +A+
Sbjct: 144 EDQLSEVKTKEEEHQRLINELSAQKARLHTESGEFSRQLDEKDAMVSQL----SRGGQAF 199
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ I+ L + L + +H + + EQ EE Q+ +AEL
Sbjct: 200 TQQ-IEGLKRQLEEETKAKSALAHALQSSRRDCDLLREQYEEEQEAKAEL 248
Score = 112 (39.4 bits), Expect = 0.0065, P = 0.0065
Identities = 48/173 (27%), Positives = 79/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A++ EL K +D +L++ E S+
Sbjct: 389 LKRENKNLQQEIS--DLTEQIAESAKHIHELEKVKKQIDQEKSELQAALEEAEGSLEHEE 446
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +E++QL K+N E + T
Sbjct: 447 GKILRIQLELNQVKS---EIDRKIAEKDEEIDQL--KRNHLRVVESMQS---------TL 492
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R ++ KM NE Q +H N++A + N + L+ Q LD
Sbjct: 493 DAEIRSRNDALRIKKKMEGDLNEMEIQLNHANRQAAEAIKNLRNTQGILKDTQLHLD 549
>gi|159333|gb|AAA20179.1| (M63109) glycoprotein 96-92 [Leishmania major]
Length = 234
Frame 3 hits (HSPs): _____________________________________________
__________________________________________________
Database sequence: | | | | | | 234
0 50 100 150 200
Plus Strand HSPs:
Score = 117 (41.2 bits), Expect = 0.00017, P = 0.00017
Identities = 43/147 (29%), Positives = 76/147 (51%), Frame = +3
Query: 135 IGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYER-KLQEDAKELEQLQSK-KNTYAA 308
I +R E + +I+K ++E K + E E ER KL+E +E E+ Q + ++ A
Sbjct: 26 IEMVRKQREEAQKKREEIQKQREEEIKRRKAEIEAERQKLKELQEEHEREQEEARSRRVA 85
Query: 309 KEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKML-HRCNEQLQQFSHVNKK---ALDQY 476
+E+E KK + D A RR+ +L ++ H E+ Q+ V K+ A +
Sbjct: 86 EEKEAQKKAEKKAEEAEDELAATRRQRKGELEELQRHAEKEEKQRIEMVRKQREEAQKKR 145
Query: 477 INFTEQREE-LQKRQAELDAGDRLNLMQ 557
+QREE +++R+AE++A +R L +
Sbjct: 146 EEIQKQREEEIKRRKAEIEA-ERQKLKE 172
Score = 84 (29.6 bits), Expect = 2.3, P = 0.90
Identities = 37/143 (25%), Positives = 67/143 (46%), Frame = +3
Query: 18 RRKQELEAVISSADADSLVADAESKWQELSDAKILVD----DAIGQLRSVTESINDRTRQ 185
++K E +A A+ D L A + EL + + + I +R E + +
Sbjct: 91 QKKAEKKA--EEAE-DELAATRRQRKGELEELQRHAEKEEKQRIEMVRKQREEAQKKREE 147
Query: 186 IKKIKDELNKLKSLEDEYER-KLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPLTS 359
I+K ++E K + E E ER KL+E +E E+ Q + + A+E+E KK +
Sbjct: 148 IQKQREEEIKRRKAEIEAERQKLKELQEEHEREQEEARQRRVAEEKEAQKKAEKKAEEAE 207
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQ 437
D A RR+ +L ++ + E+ +
Sbjct: 208 DELAATRRQRKGELEELQAQREEEAE 233
>gi|4249695|gb|AAD13769.1| (AF097904) myosin heavy chain [Rana catesbeiana]
Length = 879
Frame 3 hits (HSPs): ______________________________________
__________________________________________________
Database sequence: | | | | | | | 879
0 150 300 450 600 750
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00017, P = 0.00017
Identities = 39/174 (22%), Positives = 88/174 (50%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
T+ RK+ ++V + D+L + +E S+ K+ +DD L +V++S + +
Sbjct: 128 TSAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNLENVSKSKANLEK 187
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
+ ++D+L+++K+ +DE++R + + + +LQ++ + + EE I +L S
Sbjct: 188 VSRVLEDQLSEIKTKDDEHQRVINDLTAQRARLQTENGELSRQLEEKESLITQL----SR 243
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
+A+ ++ ++L + L + +H + + EQ EE Q+ +AEL
Sbjct: 244 GKQAFTQQT-EELRRQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEAKAEL 297
Score = 121 (42.6 bits), Expect = 0.00045, P = 0.00045
Identities = 40/172 (23%), Positives = 83/172 (48%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
T+ RK+ ++V + D+L + +E S+ K+ +DD L +V++S + +
Sbjct: 128 TSAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNLENVSKSKANLEK 187
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
+ ++D+L+++K+ +DE++R + + + +LQ++ + + EE I +L
Sbjct: 188 VSRVLEDQLSEIKTKDDEHQRVINDLTAQRARLQTENGELSRQLEEKESLITQLSR-GKQ 246
Query: 363 AFEAYR---RRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQK 512
AF RR +++ K + LQ H +QY E + ELQ+
Sbjct: 247 AFTQQTEELRRQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEAKAELQR 299
Score = 105 (37.0 bits), Expect = 0.050, P = 0.049
Identities = 50/185 (27%), Positives = 90/185 (48%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +++ EL AK LV+ L++ E S+
Sbjct: 438 LKRENKNLQQEIS--DLTEQISETGKTVHELEKAKKLVEQEKSDLQAALEEAEGSLEHEE 495
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN+LKS E +RK+ E +E+EQL K+N+ + + E+ +
Sbjct: 496 SKILRIQLELNQLKS---EVDRKIAEKDEEIEQL--KRNSQRIIDTMQSTLDSEIRS-RN 549
Query: 360 DAFEAYRRR--NIKDLHKMLHRCNEQL----QQFSHVNKKALDQYINFTE---QREELQK 512
DA ++ ++ +L L N Q +Q +V D + + +E+L++
Sbjct: 550 DALRLKKKMEGDLNELEIQLSHANRQAAEAQKQLRNVQAHLKDNQLQLDDALRSQEDLKE 609
Query: 513 RQAELDAGDRLNLMQ 557
+ A ++ R NL Q
Sbjct: 610 QVAVVER--RNNLQQ 622
Score = 103 (36.3 bits), Expect = 0.088, P = 0.084
Identities = 46/179 (25%), Positives = 82/179 (45%), Frame = +3
Query: 24 KQELEAVISSADAD------SLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
K EL+ +S A+++ DA + +EL +AK + + + E++N +
Sbjct: 294 KAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEQVEAVNSKCAS 353
Query: 186 IKKIKDELN-KLKSLEDEYERKLQEDAKELEQLQSKKNTYAAK-EEEYAKKIRELGPLTS 359
++K K L +++ L + ER A L++ Q + A+ +++Y + EL
Sbjct: 354 LEKTKQRLQAEVEDLMVDVERS-NSAAAALDKKQRNFDKVLAEWKQKYEEAQAELESALK 412
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNK--KALDQYIN-FTEQREELQKRQAELD 530
DA R ++ KM + E L Q + + K L Q I+ TEQ E K EL+
Sbjct: 413 DA-----RSMSTEIFKMKNAYEESLDQLETLKRENKNLQQEISDLTEQISETGKTVHELE 467
Query: 531 AGDRL 545
+L
Sbjct: 468 KAKKL 472
Score = 98 (34.5 bits), Expect = 0.35, P = 0.29
Identities = 40/163 (24%), Positives = 81/163 (49%), Frame = +3
Query: 60 ADSLVADAESKWQELSDAKILVDD-AIGQLRSVTESINDRTRQI-KKIKDELNKLKSLED 233
A+ + D E++ Q+ ++ KI D I QL+ E Q+ KKIK+ +++ +E+
Sbjct: 2 AEETIMDLENEKQQ-AEEKIKKKDFEISQLQGKIEDEQSLASQLQKKIKELQARIEEVEE 60
Query: 234 EYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNI------K 395
E E + A+ ++ ++ + + EE ++++ E G TS E ++R +
Sbjct: 61 EIEAERAARAR----VEKQRADLSRELEEISERLEEAGGATSAQIELNKKREAEFQKLRR 116
Query: 396 DLHK--MLHRCNEQLQQFSHVNKKA-LDQYI-NFTEQREELQKRQAEL 527
DL + + H + H + A L + I N +++L+K ++EL
Sbjct: 117 DLEESTLHHEATSAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEL 164
Score = 89 (31.3 bits), Expect = 3.9, P = 0.98
Identities = 34/166 (20%), Positives = 72/166 (43%), Frame = +3
Query: 30 ELEAVISSADADSLVADAESKWQELS-DAKILVDDAIGQLRSVTESINDRTRQIKKIKDE 206
+LE ++ D +A+ + + ++L +++ ++D L S S ND R KK++ +
Sbjct: 502 QLELNQLKSEVDRKIAEKDEEIEQLKRNSQRIIDTMQSTLDSEIRSRNDALRLKKKMEGD 561
Query: 207 LNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRR 386
LN+L+ R+ E K+L +Q+ + ++ +R L RR
Sbjct: 562 LNELEIQLSHANRQAAEAQKQLRNVQAHLKDNQLQLDD---ALRSQEDLKEQVAVVERRN 618
Query: 387 NIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
N++ + L+Q K A + ++ +E+ + L + L
Sbjct: 619 NLQQAE--IEEIRSALEQTERSRKVAEQELLDASERVQLLHSQNTSL 663
>gi|5360746|dbj|BAA82144.1| (AB025260) myosin heavy chain 2a [Sus scrofa]
Length = 1939
Frame 3 hits (HSPs): ______________ _____
__________________________________________________
Database sequence: | | | | | 1939
0 500 1000 1500
Plus Strand HSPs:
Score = 126 (44.4 bits), Expect = 0.00023, P = 0.00023
Identities = 38/169 (22%), Positives = 87/169 (51%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD + +V+++ + + + +
Sbjct: 1197 RKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRTL 1256
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L++LKS E+E +R + + + +LQ++ ++ + +E + +L S +AY
Sbjct: 1257 EDQLSELKSKEEEQQRLINDLTAQRGRLQTESGEFSRQLDEKEALVSQL----SRGKQAY 1312
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ I++L + L + +H + + EQ EE Q+ +AEL
Sbjct: 1313 TQQ-IEELKRQLEEEIKAKNALAHALQSSRHDCDLLREQYEEEQESKAEL 1361
Score = 114 (40.1 bits), Expect = 0.0096, P = 0.0095
Identities = 35/167 (20%), Positives = 82/167 (49%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD + +V+++ + + + +
Sbjct: 1197 RKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRTL 1256
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELG---PLTSDAF 368
+D+L++LKS E+E +R + + + +LQ++ ++ + +E + +L +
Sbjct: 1257 EDQLSELKSKEEEQQRLINDLTAQRGRLQTESGEFSRQLDEKEALVSQLSRGKQAYTQQI 1316
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQK 512
E +R+ +++ K + LQ H +QY E + ELQ+
Sbjct: 1317 EELKRQLEEEI-KAKNALAHALQSSRHDCDLLREQYEEEQESKAELQR 1363
Score = 107 (37.7 bits), Expect = 0.070, P = 0.067
Identities = 46/173 (26%), Positives = 81/173 (46%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ + EL K V+ ++++ E S+
Sbjct: 1502 LKRENKNLQQEIS--DLTEQIAEGGKRIHELEKIKKQVEQEKSEIQAALEEAEASLEHEE 1559
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +E++QL K+N + + + + +
Sbjct: 1560 GKILRIQLELNQVKS---EVDRKIAEKDEEIDQL--KRN--------HVRVVESMQSML- 1605
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R I+ KM NE Q +H N+ A + N+ + L+ Q LD
Sbjct: 1606 DAEIRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQIHLD 1662
Score = 101 (35.6 bits), Expect = 0.37, P = 0.31
Identities = 51/184 (27%), Positives = 93/184 (50%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DRT 179
L + K +L+ + A+A+ L ADAE + +L KI ++ I ++ E IN + T
Sbjct: 884 LLKEKNDLQLQVQ-AEAEGL-ADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELT 941
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPLT 356
+ +K++DE ++LK D+ E L + KE ++K KN EE A + LT
Sbjct: 942 AKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL----TEEMAGLDETIAKLT 997
Query: 357 SD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKRQ 518
+ A + ++ + DL + N + + + ++ +D EQ R +L++ +
Sbjct: 998 KEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERAK 1056
Query: 519 AELDAGDRLNLMQ 557
+L+ GD L L Q
Sbjct: 1057 RKLE-GD-LKLAQ 1067
Score = 90 (31.7 bits), Expect = 7.3, P = 1.0
Identities = 45/173 (26%), Positives = 84/173 (48%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
L + K +LE + + SL + + + +L AK ++ G L+ ESI D + +
Sbjct: 1024 LTKAKTKLEQQVDDLEG-SLEQEKKLR-MDLERAKRKLE---GDLKLAQESIMDIENEKQ 1078
Query: 192 KIKDELNKLKSLE-DEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF 368
++ ++L K K E + K++++ QLQ K A+ EE ++I S A
Sbjct: 1079 QLDEKLKK-KEFEISNLQSKIEDEQALAIQLQKKIKELQARIEELEEEIE--AERASRA- 1134
Query: 369 EAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQRE-ELQKRQAELD 530
+A ++R+ DL + L +E+L++ A I ++RE E QK + +L+
Sbjct: 1135 KAEKQRS--DLSRELEEISERLEEAGG----ATSAQIEMNKKREAEFQKMRRDLE 1183
>gi|806511|dbj|BAA09067.1| (D50474) myosin heavy chain [Cyprinus carpio]
Length = 1196
Frame 3 hits (HSPs): _________ ___________ _________
__________________________________________________
Database sequence: | | | | | | | | | 1196
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00025, P = 0.00025
Identities = 38/172 (22%), Positives = 87/172 (50%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ ++V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 455 RKKQADSVAELGEQIDNLQRIKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRTL 514
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L + +A+
Sbjct: 515 EDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQL----TRGKQAF 570
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
++ I+DL + + + +H + A EQ EE Q+ +AEL G
Sbjct: 571 TQQ-IEDLKRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRG 622
Score = 93 (32.7 bits), Expect = 1.9, P = 0.85
Identities = 42/184 (22%), Positives = 84/184 (45%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDD---AIGQLRSVTESINDR 176
T L + K E + + +L + ++ QE+SD + + +I ++ +++
Sbjct: 741 TELFKMKNSYEEALDHLE--TLKRENKNLQQEISDLSEQLGETGKSIHEIEKAKKTVESE 798
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLT 356
+I+ +E +LE E E K+ EL Q++S+ + A+++E ++I+
Sbjct: 799 KAEIQTALEEAEG--TLEHE-ESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKRNSQRV 855
Query: 357 SDAFEA-----YRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKR 515
D+ ++ R RN ++ KM NE Q SH N++A + + +L+
Sbjct: 856 LDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEVQLSHANRQAAEAQKQLRNVQGQLKDA 915
Query: 516 QAELDAGDR 542
Q LD R
Sbjct: 916 QLHLDEAVR 924
Score = 90 (31.7 bits), Expect = 4.3, P = 0.99
Identities = 48/185 (25%), Positives = 96/185 (51%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DR 176
+L + K +L ++S ++++L +DAE + + L +KI ++ + + E IN +
Sbjct: 141 SLVQEKNDLLLQVTS-ESENL-SDAEERCEGLIKSKIQLEGKLKETTERLEDEEEINAEL 198
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPL 353
T + +K++DE ++LK D+ E L + KE ++K KN EE A + + L
Sbjct: 199 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL----TEEMASQDESIAKL 254
Query: 354 TSD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKR 515
T + A + ++ + DL + N + + + ++ +D EQ R +L++
Sbjct: 255 TKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERV 313
Query: 516 QAELDAGDRLNLMQ 557
+ +L+ GD L L Q
Sbjct: 314 KRKLE-GD-LKLAQ 325
Score = 88 (31.0 bits), Expect = 7.2, P = 1.0
Identities = 43/168 (25%), Positives = 81/168 (48%), Frame = +3
Query: 24 KQELEAVISS-ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIK 200
++E+EA S+ A + AD + +E+S+ +++A G + E R + +K++
Sbjct: 381 EEEIEAERSARAKVEKQRADLSRELEEISER---LEEAGGATAAQIEMNKKREAEFQKMR 437
Query: 201 DELNKLKSLEDEYE----RKLQEDA-KEL-EQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
+L + +L+ E RK Q D+ EL EQ+ + + E+E ++ E+ L+S+
Sbjct: 438 RDLEE-STLQHEATAAALRKKQADSVAELGEQIDNLQRIKQKLEKEKSEYKMEIDDLSSN 496
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAE 524
EA + +L KM +QL + + + Q + QR LQ E
Sbjct: 497 -MEAVAKAK-GNLEKMCRTLEDQLSEIKAKSDENSRQLNDMNAQRARLQTENGE 548
>gi|162054|gb|AAA30184.1| (M60557) open reading frame A; putative [Trypanosoma
brucei]
Length = 131
Frame 3 hits (HSPs): _________________________________________________
__________________________________________________
Database sequence: | | | | 131
0 50 100
Plus Strand HSPs:
Score = 100 (35.2 bits), Expect = 0.00027, P = 0.00027
Identities = 31/118 (26%), Positives = 56/118 (47%), Frame = +3
Query: 123 VDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAK---ELEQLQSKK 293
++D + LR+V E R +++EL+ L++L ++YE + +A EL+ L++
Sbjct: 2 MEDELDSLRAVNEQYEALQRTNVAMEEELDSLRALNEQYETLQRTNAAMEDELDSLRAAN 61
Query: 294 NTYAAKEEEYAKKIRELGPLTS--DAFEAYRRRN--IKDLHKMLHRCNEQLQQFSHVN 455
Y + A EL L + + +EA +R N ++D L NEQ + N
Sbjct: 62 EQYETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQYEALQRTN 119
Score = 99 (34.8 bits), Expect = 0.00035, P = 0.00035
Identities = 30/115 (26%), Positives = 59/115 (51%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE 236
+ DSL A E +++ L + +++ + LR++ E R ++DEL+ L++ ++
Sbjct: 5 ELDSLRAVNE-QYEALQRTNVAMEEELDSLRALNEQYETLQRTNAAMEDELDSLRAANEQ 63
Query: 237 YERKLQEDA---KELEQLQSKKNTYAAKEEEYAKKIRELGPLTS--DAFEAYRRRN 389
YE + +A +EL+ L++ Y A + A EL L + + +EA +R N
Sbjct: 64 YETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQYEALQRTN 119
Score = 88 (31.0 bits), Expect = 0.074, P = 0.071
Identities = 30/122 (24%), Positives = 57/122 (46%), Frame = +3
Query: 195 IKDELNKLKSLEDEYERKLQEDA---KELEQLQSKKNTYAAKEEEYAKKIRELGPL--TS 359
++DEL+ L+++ ++YE + + +EL+ L++ Y + A EL L +
Sbjct: 2 MEDELDSLRAVNEQYEALQRTNVAMEEELDSLRALNEQYETLQRTNAAMEDELDSLRAAN 61
Query: 360 DAFEAYRRRN--IKDLHKMLHRCNEQLQQFSHVN---KKALDQYINFTEQREELQKRQAE 524
+ +E +R N +++ L NEQ + N + LD EQ E LQ+ A
Sbjct: 62 EQYETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQYEALQRTNAA 121
Query: 525 LD 530
++
Sbjct: 122 ME 123
Score = 76 (26.8 bits), Expect = 4.2, P = 0.99
Identities = 19/77 (24%), Positives = 40/77 (51%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE 236
+ DSL A A +++ L +++ + LR++ E R ++DEL+ L++L ++
Sbjct: 53 ELDSLRA-ANEQYETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQ 111
Query: 237 YERKLQEDAKELEQLQS 287
YE + +A + + S
Sbjct: 112 YEALQRTNAAMEDDIDS 128
>gi|806515|dbj|BAA09069.1| (D50476) myosin heavy chain [Cyprinus carpio]
Length = 955
Frame 3 hits (HSPs): ______________ __________
__________________________________________________
Database sequence: | | | | | | | | 955
0 150 300 450 600 750 900
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 0.00028, P = 0.00028
Identities = 38/172 (22%), Positives = 87/172 (50%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ ++V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 214 RKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRTL 273
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L + +AY
Sbjct: 274 EDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQL----TRGKQAY 329
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
++ I++L + + + +H + A EQ EE Q+ +AEL G
Sbjct: 330 TQQ-IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRG 381
Score = 109 (38.4 bits), Expect = 0.018, P = 0.018
Identities = 35/174 (20%), Positives = 84/174 (48%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ ++V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 214 RKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRTL 273
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL--GPLTSDAFE 371
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L G
Sbjct: 274 EDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQI 333
Query: 372 AYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDA 533
+R+I++ K + +Q H +QY E + ELQ+ ++ ++
Sbjct: 334 EELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANS 387
Score = 97 (34.1 bits), Expect = 0.50, P = 0.39
Identities = 46/184 (25%), Positives = 91/184 (49%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
T L + K E + + +L + ++ QE+SD L + QL +SI++ +
Sbjct: 500 TELFKMKNSYEEALDHLE--TLKRENKNLQQEISD---LTE----QLGETGKSIHELEKA 550
Query: 186 IKKIKDELNKLKSLEDEYERKLQ-EDAK------ELEQLQSKKNTYAAKEEEYAKKIREL 344
K ++ E +++++ +E E L+ E++K EL Q++S+ + A+++E ++I+
Sbjct: 551 KKTVESEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKRN 610
Query: 345 GPLTSDAFEA-----YRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREE 503
D+ ++ R RN ++ KM NE Q SH N++A + + +
Sbjct: 611 SQRVIDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAAEAQKQLRNVQGQ 670
Query: 504 LQKRQAELDAGDR 542
L+ Q LD R
Sbjct: 671 LKDAQLHLDEAVR 683
Score = 96 (33.8 bits), Expect = 0.65, P = 0.48
Identities = 28/113 (24%), Positives = 54/113 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISS--ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
NL+R KQ+LE S + D L ++ E+ + ++ + + QL + ++ R
Sbjct: 230 NLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVR 289
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRE 341
Q+ + + +L++ E+ R+L+E + QL K Y + EE + I E
Sbjct: 290 QLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQIEELKRHIEE 342
Score = 93 (32.7 bits), Expect = 1.5, P = 0.77
Identities = 43/168 (25%), Positives = 82/168 (48%), Frame = +3
Query: 24 KQELEAVISS-ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIK 200
++E+EA ++ A + AD + +E+S+ +++A G + E R + +K++
Sbjct: 140 EEEIEAERAARAKVEKQRADLSRELEEISER---LEEAGGATAAQIEMNKKREAEFQKMR 196
Query: 201 DELNKLKSLEDEYE----RKLQEDA-KEL-EQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
+L + +L+ E RK Q D+ EL EQ+ + + E+E ++ E+ LTS+
Sbjct: 197 RDLEE-STLQHEATAAALRKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSN 255
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAE 524
EA + +L KM +QL + + + + Q + QR LQ E
Sbjct: 256 -MEAVAKAKA-NLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGE 307
>gi|7494080|pir||A45616 antigenic protein - Trypanosoma brucei rhodesiense
(fragments)
Length = 471
Frame 3 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | 471
0 150 300 450
Plus Strand HSPs:
Score = 120 (42.2 bits), Expect = 0.00028, P = 0.00028
Identities = 42/167 (25%), Positives = 79/167 (47%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE 236
+ DSL A E +++ L + +++ + LR++ E R ++DEL+ L++ ++
Sbjct: 5 ELDSLRAVNE-QYEALQRTNVAMEEELDSLRALNEQYETLQRTNAAMEDELDSLRAANEQ 63
Query: 237 YERKLQEDA---KELEQLQSKKNTYAAKEEEYAKKIRELGPLTS--DAFEAYRRRN--IK 395
YE + +A +EL+ L++ Y A + A EL L + + +EA +R N ++
Sbjct: 64 YETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQYEALQRTNAAME 123
Query: 396 DLHKMLHRCNEQLQQFSHVN---KKALDQYINFTEQREELQKRQAELD 530
D L NEQ + N K LD EQ E ++ + ++
Sbjct: 124 DDIDSLRALNEQYEAAKRTNVAIKDELDSLRALNEQYEAARRSNSAME 171
Score = 115 (40.5 bits), Expect = 0.0013, P = 0.0013
Identities = 48/160 (30%), Positives = 84/160 (52%), Frame = +3
Query: 9 NLRRRKQELEAV--ISSA---DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESIND 173
+LR ++ EA+ ++A + DSL A E +++ L ++D I LR++ E
Sbjct: 80 SLRALNEQYEALQRTNAAMEDELDSLRALNE-QYEALQRTNAAMEDDIDSLRALNEQYEA 138
Query: 174 RTRQIKKIKDELNKLKSLEDEYE--RK----LQEDAKEL----EQLQSKKNTYAAKEEEY 323
R IKDEL+ L++L ++YE R+ ++++ K L EQ ++ + + A E+E
Sbjct: 139 AKRTNVAIKDELDSLRALNEQYEAARRSNSAMEDELKSLRAANEQYETLQRSNTAMEDEL 198
Query: 324 AKKIRELGPLTSDAFEAYRRRNIKDLHK---MLHRCNEQLQQFSHVN 455
K +R L ++ +EA RR N D+ + L NEQ + N
Sbjct: 199 -KSLRAL----NEQYEAARRSN-SDMEEELGSLRALNEQYEALPRTN 239
Score = 104 (36.6 bits), Expect = 0.030, P = 0.030
Identities = 40/156 (25%), Positives = 70/156 (44%), Frame = +3
Query: 123 VDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAK---ELEQLQSKK 293
++D + LR+V E R +++EL+ L++L ++YE + +A EL+ L++
Sbjct: 2 MEDELDSLRAVNEQYEALQRTNVAMEEELDSLRALNEQYETLQRTNAAMEDELDSLRAAN 61
Query: 294 NTYAAKEEEYAKKIRELGPLTS--DAFEAYRRRN--IKDLHKMLHRCNEQLQQFSHVN-- 455
Y + A EL L + + +EA +R N ++D L NEQ + N
Sbjct: 62 EQYETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQYEALQRTNAA 121
Query: 456 -KKALDQYINFTEQREELQKRQA----ELDAGDRLN 548
+ +D EQ E ++ ELD+ LN
Sbjct: 122 MEDDIDSLRALNEQYEAAKRTNVAIKDELDSLRALN 157
Score = 88 (31.0 bits), Expect = 2.4, P = 0.91
Identities = 30/122 (24%), Positives = 57/122 (46%), Frame = +3
Query: 195 IKDELNKLKSLEDEYERKLQEDA---KELEQLQSKKNTYAAKEEEYAKKIRELGPL--TS 359
++DEL+ L+++ ++YE + + +EL+ L++ Y + A EL L +
Sbjct: 2 MEDELDSLRAVNEQYEALQRTNVAMEEELDSLRALNEQYETLQRTNAAMEDELDSLRAAN 61
Query: 360 DAFEAYRRRN--IKDLHKMLHRCNEQLQQFSHVN---KKALDQYINFTEQREELQKRQAE 524
+ +E +R N +++ L NEQ + N + LD EQ E LQ+ A
Sbjct: 62 EQYETLQRTNAAMEEELDSLRALNEQYEALQRTNAAMEDELDSLRALNEQYEALQRTNAA 121
Query: 525 LD 530
++
Sbjct: 122 ME 123
>gi|7489885|pir||T14867 interaptin - slime mold (Dictyostelium discoideum)
>gi|3549261|gb|AAC34582.1| (AF057019) interaptin [Dictyostelium
discoideum]
Length = 1738
Frame 3 hits (HSPs): ______ _____________
__________________________________________________
Database sequence: | | | | | 1738
0 500 1000 1500
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 0.00028, P = 0.00028
Identities = 45/174 (25%), Positives = 85/174 (48%), Frame = +3
Query: 12 LRRRKQELEAVISSADA--DSLVADAESKWQELS--DAKIL-VDDAIGQLRSVTES---- 164
L++ QE E +S D S+ + + K ++LS D K+ + + QL +
Sbjct: 1223 LKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKDEKLQSIQQNLNQLNDENQEKVKQ 1282
Query: 165 INDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTY----AAKEEEYAKK 332
+++ +++ I+ +LN+LK E E++L E ++L+ +Q N K E+ +K
Sbjct: 1283 FSEKDEKLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQQDLNQLNDDQIKKNEKLKEK 1342
Query: 333 IRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREEL 506
+L L D F + + +K L + L QLQQ N+ ++Q +N +Q E+
Sbjct: 1343 EEQLLKLQQD-FNDQQSQQLKQLEEKLSEKENQLQQLKQENE--INQ-LNQQQQSNEI 1396
Score = 118 (41.5 bits), Expect = 0.0026, P = 0.0026
Identities = 45/176 (25%), Positives = 89/176 (50%), Frame = +3
Query: 30 ELEAVISSADADSLVADAESKWQE--LSDAKILVDD---AIGQLRSVTESI-----NDRT 179
ELE + +D L + E + Q+ L D +I D Q ++ +S +D+
Sbjct: 1151 ELEKQLKQCQSDLLKLNDEKQQQDKQLQDKQIEFDQLQLTFNQFKNDKDSQFIQLQDDQK 1210
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQ---SKKNTYAAKEEEYAKKIRE-LG 347
+Q++ I+ +LN+LK E E++L E ++L+ +Q +K ++++E + I++ L
Sbjct: 1211 QQLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKDEKLQSIQQNLN 1270
Query: 348 PLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
L + E ++ + KD + L + L Q N++ Q +E+ E+LQ Q +L
Sbjct: 1271 QLNDENQEKVKQFSEKD--EKLQSIQQDLNQLKQENQEKEKQ---LSEKDEKLQSIQQDL 1325
Query: 528 D 530
+
Sbjct: 1326 N 1326
Score = 100 (35.2 bits), Expect = 0.43, P = 0.35
Identities = 40/137 (29%), Positives = 79/137 (57%), Frame = +3
Query: 147 RSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYA 326
+S+ + ++ QI++++ +LN+ + + +L E ++L QL +KN + KE++
Sbjct: 998 QSIENDLIEKENQIQQLQSQLNEQRQ---QQSNQLSEKDQQLNQL-IEKNQFDQKEQQLK 1053
Query: 327 KKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSH-VNKK--ALDQYI--NFTE 491
++ E +D FE + I+ L L NEQ QQ S+ +++K L+Q I N ++
Sbjct: 1054 QQSIE-----NDLFE--KENQIQQLQSQL---NEQRQQQSNQLSEKDQQLNQLIEKNESD 1103
Query: 492 QREELQKRQA-ELDAGDRLNLMQ 557
Q+E+ K+Q+ E D ++ N +Q
Sbjct: 1104 QKEQQLKQQSIENDLIEKENQIQ 1126
Score = 98 (34.5 bits), Expect = 0.75, P = 0.53
Identities = 39/166 (23%), Positives = 81/166 (48%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR- 182
+ L+ R ++L + D D + S Q L+D + ++D + +S+T + D+
Sbjct: 535 SQLQDRIKQLINELQERD-DKFIEFTNSSNQSLADNQRVIDQLTNEKQSITLQLQDQQDI 593
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAA-KEEEYAKKIRELGPLTS 359
+ K+ + E +L S D +QE + LQ + NT ++E + ++L + +
Sbjct: 594 KEKEFQFEKQQLLSQIDSITTNIQEYQDKFNNLQQEFNTQQTLNQQETHRLTQQLYQINT 653
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQL-QQFSHVNKKALDQYINFTEQREE 503
D E ++ ++ K NEQL +Q S +K+ +++ N EQ+++
Sbjct: 654 DYNE--KQTQLQSEIKDNQTINEQLNKQLSEKDKE-IEKLSNQQEQQQD 699
Score = 91 (32.0 bits), Expect = 4.9, P = 0.99
Identities = 39/172 (22%), Positives = 83/172 (48%), Frame = +3
Query: 24 KQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRT----RQIK 191
K E + S+ D K ++ ++ +++ QL+S ND+ +Q+K
Sbjct: 1099 KNESDQKEQQLKQQSIENDLIEKENQIQQLQLQLNEQ-RQLQSEVSIDNDKILELEKQLK 1157
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAA-KEEEYAK----KIRELGPLT 356
+ + +L KL + + +++LQ+ E +QLQ N + K+ ++ + + ++L +
Sbjct: 1158 QCQSDLLKLNDEKQQQDKQLQDKQIEFDQLQLTFNQFKNDKDSQFIQLQDDQKQQLQSIQ 1217
Query: 357 SDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
D ++ N ++ K L +E+LQ N++ Q +E+ E+LQ Q L+
Sbjct: 1218 QD-LNQLKQEN-QEKEKQLSEKDEKLQSIQFENQEKEKQ---LSEKDEKLQSIQQNLN 1270
>gi|4249701|gb|AAD13772.1| (AF097907) myosin heavy chain [Rana catesbeiana]
Length = 826
Frame 3 hits (HSPs): ___________ ____________
__________________________________________________
Database sequence: | | | | | | | 826
0 150 300 450 600 750
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 0.00031, P = 0.00031
Identities = 42/167 (25%), Positives = 80/167 (47%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ VDD L SV++S + + + +
Sbjct: 84 RKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEVDDLASNLESVSKSKANLEKVNRVL 143
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGP----LTSDA 365
+D+L+++KS +DE+ R L + + +LQ++ + + EE I +L T
Sbjct: 144 EDQLSEIKSKDDEHLRLLNDLTTQKARLQTETGELSRQLEEKESLISQLSRGKQGFTQQV 203
Query: 366 FEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQK 512
E +R +++ K + LQ H N +QY E + E Q+
Sbjct: 204 EEL--KRQLEEESKAKNALAHALQSARHDNDLLREQYEEEQEAKAEFQR 250
Score = 100 (35.2 bits), Expect = 0.19, P = 0.17
Identities = 45/180 (25%), Positives = 90/180 (50%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
T + + K E + + +L + ++ QE+SD + + IG+ +SIN+ +
Sbjct: 370 TEIFKMKNAYEEALEQVE--TLKRENKNLQQEISD----LTEQIGE---TGKSINELEKA 420
Query: 186 IKKIKDELNKLKSLEDEYERKLQ-EDAK------ELEQLQSKKNTYAAKEEEYAKKIREL 344
K+++ E + L++ +E E L+ E+AK EL Q++S+ + A+++E ++++
Sbjct: 421 RKQVEQEKSDLQAALEEAEGSLEHEEAKILRVQLELNQIKSEVDRKIAEKDEENEQLKRN 480
Query: 345 GPLTSDAFEA-----YRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREE 503
D ++ R RN ++ KM NE Q SH N++A + + +
Sbjct: 481 SQRAIDTMQSTLDSEIRSRNDALRLKKKMEGDLNELEIQLSHANRQASEAQKQLRNVQGQ 540
Query: 504 LQKRQAELD 530
L+ Q LD
Sbjct: 541 LKDAQLHLD 549
>gi|8250661|gb|AAB29713.2| (S68736) myosin heavy chain [Rattus sp.]
Length = 892
Frame 3 hits (HSPs): ____________________ __________
__________________________________________________
Database sequence: | | | | | | | 892
0 150 300 450 600 750
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 0.00034, P = 0.00034
Identities = 37/169 (21%), Positives = 86/169 (50%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD + +++S + + + +
Sbjct: 150 RKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMEVISKSKGNLEKMCRTL 209
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D++++LK+ E+E +R + E + +LQ++ Y+ + +E + +L S +A+
Sbjct: 210 EDQVSELKTKEEEQQRLINELTAQRGRLQTESGEYSRQLDEKDSLVSQL----SRGKQAF 265
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ I++L + L + +H + + EQ EE Q+ +AEL
Sbjct: 266 TQQ-IEELKRQLEEEVKAKSALAHALQSSRHDCDLLREQYEEEQEAKAEL 314
Score = 109 (38.4 bits), Expect = 0.017, P = 0.017
Identities = 48/173 (27%), Positives = 79/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ + EL K ++ +L++ E S+
Sbjct: 455 LKRENKNLQQEIS--DLTEQIAEGGKRIHELEKIKKQIEQEKSELQAALEEAEASLEHEE 512
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +E++QL K+N E + T
Sbjct: 513 GKILRIQLELNQVKS---EIDRKIAEKDEEIDQL--KRNHIRVVESMQS---------TL 558
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R I+ KM NE Q +H N+ A + N+ + L+ Q LD
Sbjct: 559 DAEIRSRNDAIRIKKKMEGDLNEMEIQLNHSNRMAAEALRNYRNTQGILKDTQLHLD 615
Score = 99 (34.8 bits), Expect = 0.27, P = 0.23
Identities = 42/167 (25%), Positives = 78/167 (46%), Frame = +3
Query: 30 ELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI-KKIKDE 206
+LE + A ++ D E+ Q+L + + + L+S E Q+ KKIK+
Sbjct: 11 KLEGDLKLAQESTM--DVENDKQQLDEKLKKKEFEMSNLQSKIEDEQALGMQLQKKIKEL 68
Query: 207 LNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRR 386
+++ LE+E E + AK +Q ++ + + EE ++++ E G TS E ++R
Sbjct: 69 QARIEELEEEIEAERASRAKAEKQ----RSDLSRELEEISERLEEAGGATSAQIEMNKKR 124
Query: 387 NIKDLHKMLHRCNEQLQQF----SHVNKKALDQYINFTEQREELQKRQAELD 530
+ KM E Q + + KK D EQ + LQ+ + +L+
Sbjct: 125 EA-EFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLE 175
Score = 92 (32.4 bits), Expect = 1.8, P = 0.83
Identities = 46/187 (24%), Positives = 88/187 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSA--DADSLVADAE--SKWQ-ELSDAKILVDDAIGQLRSVTESIND 173
NL+R KQ+LE S + D L ++ E SK + L ++D + +L++ E +
Sbjct: 166 NLQRVKQKLEKEKSEMKMEIDDLASNMEVISKSKGNLEKMCRTLEDQVSELKTKEE---E 222
Query: 174 RTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPL 353
+ R I ++ + +L++ EY R+L E + QL K + + EE +++ E
Sbjct: 223 QQRLINELTAQRGRLQTESGEYSRQLDEKDSLVSQLSRGKQAFTQQIEELKRQLEEEVKA 282
Query: 354 TSDAFEAYR--RRN---IKDLHKMLHRCNEQLQQ-FSHVNKKALD---QY----INFTEQ 494
S A + R + +++ ++ +LQ+ S N + +Y I TE+
Sbjct: 283 KSALAHALQSSRHDCDLLREQYEEEQEAKAELQRAMSKANSEVAQWRTKYETDAIQRTEE 342
Query: 495 REELQKRQAE 524
EE +K+ A+
Sbjct: 343 LEEAKKKLAQ 352
>gi|7500490|pir||T16270 hypothetical protein F35D11.11 - Caenorhabditis elegans
>gi|868224|gb|AAA68757.1| (U29381) F35D11.11 gene product
[Caenorhabditis elegans]
Length = 1827
Frame 3 hits (HSPs): _____ _______
__________________________________________________
Database sequence: | | | | | 1827
0 500 1000 1500
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00040, P = 0.00040
Identities = 37/153 (24%), Positives = 78/153 (50%), Frame = +3
Query: 84 ESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDA 263
+ K +E +D + L+DD G +T + + + + +E++ LK ++ E++ +E+
Sbjct: 708 QEKEREEADLRALLDDLRGNFDKLTNELKQKGVTVDSLNEEISSLKEQLNKSEKERKEEL 767
Query: 264 KELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAF--EAYRRRN-IKDLHKMLHRCNEQL 434
+E+L+ K +E E ++ E + F E R N + +H+ML ++QL
Sbjct: 768 LRMEELEQKNEAEMKEEYEVKLQLAEKDRQGVENFGKECEARMNELTKIHEMLMEEHDQL 827
Query: 435 QQFSHVNKKALDQYINFTEQREELQKRQAELDAGDR 542
+ H++ + + + + R+EL+K + D GDR
Sbjct: 828 K-VDHLHTEEEVERLK-EKMRKELEKLNEQND-GDR 860
Score = 98 (34.5 bits), Expect = 0.79, P = 0.55
Identities = 39/183 (21%), Positives = 93/183 (50%), Frame = +3
Query: 9 NLRRRKQELEAVISSADAD-----SLVADAESKWQELSDAKILVDDAIGQLRSVTESIND 173
N K+E E + A+ D + + E++ EL+ ++ + QL+ + ++
Sbjct: 777 NEAEMKEEYEVKLQLAEKDRQGVENFGKECEARMNELTKIHEMLMEEHDQLK--VDHLHT 834
Query: 174 RTRQIKKIKDELNK-LKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGP 350
+++++K+++ K L+ L ++ + E + E +L+S KN + +E +K+ ++
Sbjct: 835 E-EEVERLKEKMRKELEKLNEQNDGDRAEWSNERNRLESSKNEAVTELQERVQKLEDVVK 893
Query: 351 LTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
D E RR+++D H+ +++L++ + D+ E+ E+ +K Q L+
Sbjct: 894 EKEDK-EIALRRDLEDSHEKSRDLDDKLRKM-----ELTDE-----EKEEDRKKEQKTLN 942
Query: 531 AGDRLNLMQ 557
+R+ LM+
Sbjct: 943 E-ERMKLME 950
Score = 91 (32.0 bits), Expect = 5.2, P = 0.99
Identities = 28/130 (21%), Positives = 62/130 (47%), Frame = +3
Query: 138 GQLRSVTESINDRTRQIKKIKDELNKLKS-LEDEYERKLQEDAKELEQLQSKKNTYAAKE 314
G + ++ ++D+T ++ ++ E ++LK LE E E+ Q D E+ + ++K + A KE
Sbjct: 495 GDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDL-EIAECRAKLDEMAEKE 553
Query: 315 EEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ 494
E K++ E + + A E + N + + + N Q +N + ++
Sbjct: 554 AELRKELAEFQAIIT-AMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNL 612
Query: 495 REELQKRQAEL 527
LQ+++ +
Sbjct: 613 MATLQEKEVHI 623
>gi|2351219|dbj|BAA22067.1| (D89990) myosin heavy chain [Cyprinus carpio]
Length = 1933
Frame 3 hits (HSPs): ______ ______ _____
__________________________________________________
Database sequence: | | | | | 1933
0 500 1000 1500
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00043, P = 0.00043
Identities = 38/172 (22%), Positives = 87/172 (50%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ ++V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 1192 RKKQADSVAELGEQIDNLQRIKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRTL 1251
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L + +A+
Sbjct: 1252 EDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQL----TRGKQAF 1307
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
++ I+DL + + + +H + A EQ EE Q+ +AEL G
Sbjct: 1308 TQQ-IEDLKRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRG 1359
Score = 93 (32.7 bits), Expect = 3.2, P = 0.96
Identities = 42/184 (22%), Positives = 84/184 (45%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDD---AIGQLRSVTESINDR 176
T L + K E + + +L + ++ QE+SD + + +I ++ +++
Sbjct: 1478 TELFKMKNSYEEALDHLE--TLKRENKNLQQEISDLSEQLGETGKSIHEIEKAKKTVESE 1535
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLT 356
+I+ +E +LE E E K+ EL Q++S+ + A+++E ++I+
Sbjct: 1536 KAEIQTALEEAEG--TLEHE-ESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKRNSQRV 1592
Query: 357 SDAFEA-----YRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKR 515
D+ ++ R RN ++ KM NE Q SH N++A + + +L+
Sbjct: 1593 LDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEVQLSHANRQAAEAQKQLRNVQGQLKDA 1652
Query: 516 QAELDAGDR 542
Q LD R
Sbjct: 1653 QLHLDEAVR 1661
Score = 90 (31.7 bits), Expect = 7.3, P = 1.0
Identities = 48/185 (25%), Positives = 96/185 (51%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DR 176
+L + K +L ++S ++++L +DAE + + L +KI ++ + + E IN +
Sbjct: 878 SLVQEKNDLLLQVTS-ESENL-SDAEERCEGLIKSKIQLEGKLKETTERLEDEEEINAEL 935
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPL 353
T + +K++DE ++LK D+ E L + KE ++K KN EE A + + L
Sbjct: 936 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL----TEEMASQDESIAKL 991
Query: 354 TSD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKR 515
T + A + ++ + DL + N + + + ++ +D EQ R +L++
Sbjct: 992 TKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERV 1050
Query: 516 QAELDAGDRLNLMQ 557
+ +L+ GD L L Q
Sbjct: 1051 KRKLE-GD-LKLAQ 1062
>gi|11276952|pir||A59293 skeletal myosin heavy chain - domestic rabbit
>gi|940233|gb|AAA74199.1| (U32574) myosin heavy chain [Oryctolagus
cuniculus]
Length = 1938
Frame 3 hits (HSPs): _________ _____
__________________________________________________
Database sequence: | | | | | 1938
0 500 1000 1500
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 0.00043, P = 0.00043
Identities = 36/169 (21%), Positives = 89/169 (52%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD + +V+++ + + + +
Sbjct: 1196 RKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNMETVSKAKGNLEKMCRTL 1255
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D++++LK+ E+E++R + + + + +LQ++ ++ + +E + +L S +A+
Sbjct: 1256 EDQVSELKTKEEEHQRLINDLSAQRARLQTESGEFSRQLDEKDSLVSQL----SRGKQAF 1311
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ I++L + L + +H + A EQ EE Q+ +AEL
Sbjct: 1312 TQQ-IEELKRQLEEEIKAKSALAHALQSARHDCDLLREQYEEEQEAKAEL 1360
Score = 115 (40.5 bits), Expect = 0.0072, P = 0.0072
Identities = 45/174 (25%), Positives = 83/174 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
+L R K++LE + A ++ D E+ Q+L + + + L+S E Q+
Sbjct: 1050 DLERAKRKLEGDLKLAQESTM--DIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQL 1107
Query: 189 -KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDA 365
KKIK+ +++ LE+E E + AK +Q ++ + + EE ++++ E G TS
Sbjct: 1108 QKKIKELQARIEELEEEIEAERASRAKAEKQ----RSDLSRELEEISERLEEAGGATSAQ 1163
Query: 366 FEAYRRRNIKDLHKMLHRCNEQLQQF----SHVNKKALDQYINFTEQREELQKRQAELD 530
E ++R + KM E Q + + KK D EQ + LQ+ + +L+
Sbjct: 1164 IEMNKKREA-EFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLE 1221
Score = 113 (39.8 bits), Expect = 0.013, P = 0.013
Identities = 49/173 (28%), Positives = 79/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ + EL K V+ +L++ E S+
Sbjct: 1501 LKRENKNLQQEIS--DLTEQIAEGGKRIHELEKVKKQVEQEKSELQAALEEAEASLEHEE 1558
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +E++QL K+N E + T
Sbjct: 1559 GKILRIQLELNQVKS---EIDRKIAEKDEEIDQL--KRNHIRVVESMQS---------TL 1604
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R I+ KM NE Q +H N+ A + N+ + L+ Q LD
Sbjct: 1605 DAEIRSRNDAIRIKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQLHLD 1661
>gi|2760351|gb|AAB95253.1| (U91585) myosin heavy chain [Girardia tigrina]
Length = 431
Frame 3 hits (HSPs): ___________________________________
__________________________________________________
Database sequence: | | | | 431
0 150 300
Plus Strand HSPs:
Score = 118 (41.5 bits), Expect = 0.00045, P = 0.00045
Identities = 31/133 (23%), Positives = 66/133 (49%), Frame = +3
Query: 141 QLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEE 320
+L S + I D + + +++ ++ +L++ E E L+ + + + + ++ A+ EE
Sbjct: 169 ELSSASSKIEDESGLVAQLQKKIRELQARIQELEEDLEAERQARSKAEKSRHQLEAELEE 228
Query: 321 YAKKIRELGPLTSDAFEAYRRRNIK--DLHKMLHRCNEQLQQ-FSHVNKKALDQYINFTE 491
+ ++ E G TS ++R + +L + L N Q Q + KK D F+E
Sbjct: 229 LSDRLEEQGGATSAQMGLNKKREAELIELKRDLEEANVQHDQSVAQARKKQQDAVNEFSE 288
Query: 492 QREELQKRQAELD 530
Q ++LQK +A+ +
Sbjct: 289 QLDQLQKAKAKTE 301
Score = 105 (37.0 bits), Expect = 0.020, P = 0.019
Identities = 43/172 (25%), Positives = 87/172 (50%), Frame = +3
Query: 21 RKQELEA-VISSADADSLVADAESKWQ-ELSDAKILVDDAIGQLRSVTESINDRTRQIKK 194
R +ELE ++ DA + + + + K Q E+ + K V D L+ + + +QIK
Sbjct: 1 RIKELEDHLLEEEDASAGLEETKKKMQGEIEELKKDVVDLESSLQKAEQDKAAKDQQIKS 60
Query: 195 IKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL-GPL--TSDA 365
++D++ + ++E K++++ K ++LQ K EEE K + ++ L T D
Sbjct: 61 LQDQMAR----QEEEMNKMKKEKKAADELQKKTEESLLAEEEKVKNLNKVKAKLEQTIDE 116
Query: 366 FEAY--RRRNIK-DLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREE-LQKRQAELDA 533
E R + I+ D+ K+ + +L+Q + +D + EE L++++ EL +
Sbjct: 117 MEENLSREQKIRADVEKVKRKIEGELKQ----TPETVDDLERVKRELEEQLKRKEMELSS 172
Score = 94 (33.1 bits), Expect = 0.41, P = 0.34
Identities = 40/173 (23%), Positives = 83/173 (47%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
L++ +LE+ + A+ D D + K L D ++ + +++ ++ ++ ++ +
Sbjct: 33 LKKDVVDLESSLQKAEQDKAAKDQQIK--SLQDQMARQEEEMNKMKKEKKAADELQKKTE 90
Query: 192 K-IKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIR-ELG--PLTS 359
+ + E K+K+L ++ + KL++ E+E+ S++ A E+ +KI EL P T
Sbjct: 91 ESLLAEEEKVKNL-NKVKAKLEQTIDEMEENLSREQKIRADVEKVKRKIEGELKQTPETV 149
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
D E +R +L + L R +L S + ++ ELQ R EL+
Sbjct: 150 DDLERVKR----ELEEQLKRKEMELSSASSKIEDESGLVAQLQKKIRELQARIQELE 202
Score = 87 (30.6 bits), Expect = 2.8, P = 0.94
Identities = 39/165 (23%), Positives = 79/165 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
NL + K +LE I + ++L + + + ++ K ++ G+L+ E+++D R
Sbjct: 102 NLNKVKAKLEQTIDEME-ENLSREQKIR-ADVEKVKRKIE---GELKQTPETVDDLERVK 156
Query: 189 KKIKDELNKLKSLE-DEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDA 365
++++++L K K +E K+++++ + QLQ K A+ +E + + S A
Sbjct: 157 RELEEQL-KRKEMELSSASSKIEDESGLVAQLQKKIRELQARIQELEEDLEAERQARSKA 215
Query: 366 FEAYRRRNIKDLHKMLHRCNEQLQQFSH---VNKKALDQYINFTEQREE 503
E R + +L ++ R EQ S +NKK + I EE
Sbjct: 216 -EKSRHQLEAELEELSDRLEEQGGATSAQMGLNKKREAELIELKRDLEE 263
>gi|806513|dbj|BAA09068.1| (D50475) myosin heavy chain [Cyprinus carpio]
Length = 1092
Frame 3 hits (HSPs): __________ ________ _________
__________________________________________________
Database sequence: | | | | | | | | | 1092
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 121 (42.6 bits), Expect = 0.00059, P = 0.00059
Identities = 37/172 (21%), Positives = 85/172 (49%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ + V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 352 RKKQADTVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKGNLEKMCRTL 411
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L + +A+
Sbjct: 412 EDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQL----TRGKQAF 467
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
++ I+DL + + + +H + A EQ EE Q+ + EL G
Sbjct: 468 TQQ-IEDLQRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKTELQRG 519
Score = 112 (39.4 bits), Expect = 0.0091, P = 0.0090
Identities = 45/177 (25%), Positives = 83/177 (46%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D + + EL AK +V+ ++++ E ++
Sbjct: 657 LKRENKNLQQEIS--DLSEQLGETGKSIHELEKAKKIVESEKAEIQTALEEAESTLEHEE 714
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +++ ELN++KS E +RKL E +E+EQ+ K+N+ +++ + T
Sbjct: 715 SKILRVQLELNQVKS---EIDRKLAEKDEEIEQI--KRNS---------QRVMDSMQSTL 760
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGD 539
D+ R ++ KM NE Q SH N++A + + +L+ Q LD
Sbjct: 761 DSEIRSRNDALRVKKKMEGDLNEMEVQLSHANRQAAEAQKQLRNVQGQLKDAQLHLDEAV 820
Query: 540 R 542
R
Sbjct: 821 R 821
Score = 95 (33.4 bits), Expect = 1.0, P = 0.64
Identities = 43/184 (23%), Positives = 83/184 (45%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDD---AIGQLRSVTESINDR 176
T L + K E + + +L + ++ QE+SD + + +I +L + +
Sbjct: 638 TELFKMKNSYEEALDHLE--TLKRENKNLQQEISDLSEQLGETGKSIHELEKAKKIVESE 695
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLT 356
+I+ +E +LE E E K+ EL Q++S+ + A+++E ++I+
Sbjct: 696 KAEIQTALEEAES--TLEHE-ESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKRNSQRV 752
Query: 357 SDAFEA-----YRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKR 515
D+ ++ R RN ++ KM NE Q SH N++A + + +L+
Sbjct: 753 MDSMQSTLDSEIRSRNDALRVKKKMEGDLNEMEVQLSHANRQAAEAQKQLRNVQGQLKDA 812
Query: 516 QAELDAGDR 542
Q LD R
Sbjct: 813 QLHLDEAVR 821
Score = 88 (31.0 bits), Expect = 6.5, P = 1.0
Identities = 25/113 (22%), Positives = 54/113 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISS--ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
NL+R KQ+LE S + D L ++ E+ + + + + QL + ++ +R
Sbjct: 368 NLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKGNLEKMCRTLEDQLSEIKAKSDENSR 427
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRE 341
Q+ + + +L++ E+ R+L+E + QL K + + E+ + + E
Sbjct: 428 QLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEDLQRHVEE 480
Score = 87 (30.6 bits), Expect = 8.6, P = 1.0
Identities = 48/185 (25%), Positives = 95/185 (51%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DR 176
+L + K +L ++S ++++L DAE + + L +KI ++ + + E IN +
Sbjct: 38 SLVQEKNDLLLQVTS-ESENL-CDAEERCEGLIKSKIQLEGKLKETNERLEDEEEINAEL 95
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPL 353
T + +K++DE ++LK D+ E L + KE ++K KN EE A + + L
Sbjct: 96 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL----TEEMACQDESIAKL 151
Query: 354 TSD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKR 515
T + A + ++ + DL + N + + + ++ +D EQ R +L++
Sbjct: 152 TKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERV 210
Query: 516 QAELDAGDRLNLMQ 557
+ +L+ GD L L Q
Sbjct: 211 KRKLE-GD-LKLAQ 222
>gi|6942203|gb|AAF32356.1|AF220354_1 (AF220354) mitotic kinesin-like motor
protein CENP-ana [Drosophila melanogaster]
Length = 1931
Frame 3 hits (HSPs): __________
__________________________________________________
Database sequence: | | | | | 1931
0 500 1000 1500
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 0.00062, P = 0.00062
Identities = 51/182 (28%), Positives = 92/182 (50%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDA---IGQLRSVTESINDR 176
T +R K LE + + + +++ K Q+++D K VD+ + L+ V + + R
Sbjct: 1480 TTVREAKVGLENSLKAVQENMSAQESQFK-QKIADIKGSVDELQIKLKSLQEVRDHLESR 1538
Query: 177 TRQIK-KIKD--ELNKLKSLEDEYERKLQEDAKELEQLQ-SKKNTYAAKEEEYAKKIREL 344
++K K+KD EL + E + L+ED +LEQ + + AK+ E ++ +EL
Sbjct: 1539 NEELKRKLKDAQELQNMVDKERKLNSSLREDFDKLEQTKLDLEEQLRAKKVEIDRRSKEL 1598
Query: 345 GPLTSDAFEAYRRRNIK-DLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQ- 518
G +T D NI+ DL + N+ L++ +N D ++ EQ E K
Sbjct: 1599 GEVTKDC------ENIRSDLEA---QTNDFLKERETLNLTISDLRLH-NEQLLETSKNYL 1648
Query: 519 AELDAGDRLNL 551
+++ A + LNL
Sbjct: 1649 SDITAANNLNL 1659
Score = 102 (35.9 bits), Expect = 0.28, P = 0.24
Identities = 41/171 (23%), Positives = 86/171 (50%), Frame = +3
Query: 57 DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKK-IKDELNKLKSLED 233
+ SL +D +SK + K L+D+ I L+ + ++ K + ++ KL+S +
Sbjct: 1671 ECKSLRSDRQSKEEYFQTQKQLLDETISNLKEENRKMEEKLSSGNKALNEDCEKLRSTLE 1730
Query: 234 EYERKLQEDAKELEQ---LQSKKNTYAA------KEEEYA-KKIRELGPLTSDAFEAYRR 383
E LQ++ +ELE+ + ++KN A K E A K +++ S A EA +
Sbjct: 1731 SKELILQQNKQELEERLTVINEKNGKNALLDAQLKSNETAFKSLQKAWIKQSLAIEAANK 1790
Query: 384 RNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDRLNL 551
R++ ++ +M+ +++ +++ + + INF ++E + + L D+ NL
Sbjct: 1791 RSL-EMEQMV---DKRTREYEELRSTLKTREINFRSEKERMDGTISSL-LEDKRNL 1841
>gi|2351223|dbj|BAA22069.1| (D89992) myosin heavy chain [Cyprinus carpio]
Length = 1935
Frame 3 hits (HSPs): ______________ _____
__________________________________________________
Database sequence: | | | | | 1935
0 500 1000 1500
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 0.00062, P = 0.00062
Identities = 38/172 (22%), Positives = 87/172 (50%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ ++V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 1194 RKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRTL 1253
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L + +AY
Sbjct: 1254 EDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQL----TRGKQAY 1309
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
++ I++L + + + +H + A EQ EE Q+ +AEL G
Sbjct: 1310 TQQ-IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRG 1361
Score = 109 (38.4 bits), Expect = 0.040, P = 0.039
Identities = 35/174 (20%), Positives = 84/174 (48%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK++ ++V + D+L + +E S+ K+ +DD + +V ++ + + + +
Sbjct: 1194 RKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRTL 1253
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL--GPLTSDAFE 371
+D+L+++K+ DE R+L + + +LQ++ ++ + EE + +L G
Sbjct: 1254 EDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQI 1313
Query: 372 AYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDA 533
+R+I++ K + +Q H +QY E + ELQ+ ++ ++
Sbjct: 1314 EELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANS 1367
Score = 98 (34.5 bits), Expect = 0.84, P = 0.57
Identities = 48/185 (25%), Positives = 97/185 (52%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DR 176
+L + K +L+ ++ A++++L +DAE + + L +KI ++ + + E IN +
Sbjct: 880 SLLQEKNDLQLQVT-AESENL-SDAEERCEGLIKSKIQLEAKLKETNERLEDEEEINAEL 937
Query: 177 TRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPL 353
T + +K++DE ++LK D+ E L + KE ++K KN EE A + + L
Sbjct: 938 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNL----TEEMASQDESIAKL 993
Query: 354 TSD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKR 515
T + A + ++ + DL + N + + + ++ +D EQ R +L++
Sbjct: 994 TKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERA 1052
Query: 516 QAELDAGDRLNLMQ 557
+ +L+ GD L L Q
Sbjct: 1053 KRKLE-GD-LKLAQ 1064
Score = 97 (34.1 bits), Expect = 1.1, P = 0.67
Identities = 46/184 (25%), Positives = 91/184 (49%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
T L + K E + + +L + ++ QE+SD L + QL +SI++ +
Sbjct: 1480 TELFKMKNSYEEALDHLE--TLKRENKNLQQEISD---LTE----QLGETGKSIHELEKA 1530
Query: 186 IKKIKDELNKLKSLEDEYERKLQ-EDAK------ELEQLQSKKNTYAAKEEEYAKKIREL 344
K ++ E +++++ +E E L+ E++K EL Q++S+ + A+++E ++I+
Sbjct: 1531 KKTVESEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKRN 1590
Query: 345 GPLTSDAFEA-----YRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREE 503
D+ ++ R RN ++ KM NE Q SH N++A + + +
Sbjct: 1591 SQRVIDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEIQLSHANRQAAEAQKQLRNVQGQ 1650
Query: 504 LQKRQAELDAGDR 542
L+ Q LD R
Sbjct: 1651 LKDAQLHLDEAVR 1663
Score = 96 (33.8 bits), Expect = 1.4, P = 0.76
Identities = 28/113 (24%), Positives = 54/113 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISS--ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTR 182
NL+R KQ+LE S + D L ++ E+ + ++ + + QL + ++ R
Sbjct: 1210 NLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVR 1269
Query: 183 QIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRE 341
Q+ + + +L++ E+ R+L+E + QL K Y + EE + I E
Sbjct: 1270 QLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQIEELKRHIEE 1322
Score = 93 (32.7 bits), Expect = 3.2, P = 0.96
Identities = 43/168 (25%), Positives = 82/168 (48%), Frame = +3
Query: 24 KQELEAVISS-ADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIK 200
++E+EA ++ A + AD + +E+S+ +++A G + E R + +K++
Sbjct: 1120 EEEIEAERAARAKVEKQRADLSRELEEISER---LEEAGGATAAQIEMNKKREAEFQKMR 1176
Query: 201 DELNKLKSLEDEYE----RKLQEDA-KEL-EQLQSKKNTYAAKEEEYAKKIRELGPLTSD 362
+L + +L+ E RK Q D+ EL EQ+ + + E+E ++ E+ LTS+
Sbjct: 1177 RDLEE-STLQHEATAAALRKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSN 1235
Query: 363 AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAE 524
EA + +L KM +QL + + + + Q + QR LQ E
Sbjct: 1236 -MEAVAKAKA-NLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGE 1287
>gi|5360750|dbj|BAA82146.1| (AB025262) myosin heavy chain 2x [Sus scrofa]
Length = 1939
Frame 3 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | | | 1939
0 500 1000 1500
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 0.00062, P = 0.00062
Identities = 37/169 (21%), Positives = 87/169 (51%), Frame = +3
Query: 21 RKQELEAVISSADA-DSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V + D+L + +E S+ K+ +DD + +V+++ + + + +
Sbjct: 1197 RKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSKAKGNLEKMCRTL 1256
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L++LK+ E+E +R + + + +LQ++ Y+ + +E + +L S +A+
Sbjct: 1257 EDQLSELKTKEEEQQRLINDLTAQRARLQTESGEYSRQLDEKDTLVSQL----SRGKQAF 1312
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
++ I++L + L + +H + + EQ EE Q+ +AEL
Sbjct: 1313 TQQ-IEELKRQLEEEIKAKSALAHAVQSSRHDCDLLREQYEEEQEAKAEL 1361
Score = 115 (40.5 bits), Expect = 0.0072, P = 0.0072
Identities = 45/174 (25%), Positives = 83/174 (47%), Frame = +3
Query: 9 NLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQI 188
+L R K++LE + A ++ D E+ Q+L + + + L+S E Q+
Sbjct: 1051 DLERAKRKLEGDLKLAQESTM--DIENDKQQLDEKLKKKEFEMSNLQSKIEDEQALAMQL 1108
Query: 189 -KKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDA 365
KKIK+ +++ LE+E E + AK +Q ++ + + EE ++++ E G TS
Sbjct: 1109 QKKIKELQARIEELEEEIEAERASRAKAEKQ----RSDLSRELEEISERLEEAGGATSAQ 1164
Query: 366 FEAYRRRNIKDLHKMLHRCNEQLQQF----SHVNKKALDQYINFTEQREELQKRQAELD 530
E ++R + KM E Q + + KK D EQ + LQ+ + +L+
Sbjct: 1165 IEMNKKREA-EFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLE 1222
Score = 107 (37.7 bits), Expect = 0.070, P = 0.067
Identities = 46/173 (26%), Positives = 81/173 (46%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ + EL K V+ ++++ E S+
Sbjct: 1502 LKRENKNLQQEIS--DLTEQIAEGGKRIHELEKIKKQVEQEKSEIQAALEEAEASLEHEE 1559
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +E++QL K+N + + + + +
Sbjct: 1560 GKILRIQLELNQVKS---EVDRKIAEKDEEIDQL--KRN--------HVRVVESMQSML- 1605
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R I+ KM NE Q +H N+ A + N+ + L+ Q LD
Sbjct: 1606 DAEIRSRNDAIRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQIHLD 1662
Score = 89 (31.3 bits), Expect = 9.4, P = 1.0
Identities = 46/174 (26%), Positives = 82/174 (47%), Frame = +3
Query: 24 KQELEAVISSADAD------SLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQ 185
K EL+ +S A+++ DA + +EL +AK + + E++N +
Sbjct: 1358 KAELQRAMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCAS 1417
Query: 186 IKKIKDEL-NKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAK-EEEYAKKIRELGPLTS 359
++K K L N+++ L + ER A L++ Q + A+ +++Y + EL
Sbjct: 1418 LEKTKQRLQNEVEDLMIDVERSNAACAA-LDKKQRNFDKILAEWKQKYEETHAEL----- 1471
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNK--KALDQYIN-FTEQREELQKRQAELD 530
+A + R +L K+ + E L Q + + K L Q I+ TEQ E KR EL+
Sbjct: 1472 EASQKESRSLSTELFKVKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRIHELE 1531
>gi|9800488|gb|AAF99315.1|AF272034_1 (AF272034) fast myosin heavy chain isoform
3 [Gallus gallus]
Length = 1941
Frame 3 hits (HSPs): ______________ _____
__________________________________________________
Database sequence: | | | | | 1941
0 500 1000 1500
Plus Strand HSPs:
Score = 123 (43.3 bits), Expect = 0.00062, P = 0.00062
Identities = 39/172 (22%), Positives = 87/172 (50%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIK 191
LR++ + A + D+L + +E S+ K+ +DD + SV+++ + + +
Sbjct: 1197 LRKKHADSTAELGE-QIDNLQRVKQKLEKEKSELKMEIDDLASNMESVSKAKANLEKMCR 1255
Query: 192 KIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFE 371
++D+L+++K+ E+E++R + + + +LQ++ Y+ + EE I +L S +
Sbjct: 1256 TLEDQLSEIKTKEEEHQRMINDLNTQRARLQTEAGEYSRQVEEKDALISQL----SRGKQ 1311
Query: 372 AYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
A+ ++ I++L + L + +H + A EQ EE Q+ + EL
Sbjct: 1312 AFTQQ-IEELKRHLEEEIKAKNALAHALQSARHDCDLLREQYEEEQEAKGEL 1362
Score = 103 (36.3 bits), Expect = 0.21, P = 0.19
Identities = 50/179 (27%), Positives = 91/179 (50%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTES---IN-DRT 179
L + K +L+ + A+ADSL ADAE + +L KI ++ I ++ E IN + T
Sbjct: 885 LVQEKNDLQLQVQ-AEADSL-ADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELT 942
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTYAAKEEEYAKKIRELGPLT 356
+ +K++DE ++LK D+ E L + KE ++K KN EE A + LT
Sbjct: 943 AKKRKLEDECSELKKDMDDLELTLAKVEKEKHATENKVKNL----TEEMAALDETIVKLT 998
Query: 357 SD--AFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQ----REELQKRQ 518
+ A + ++ + DL + N + + + ++ +D EQ R +L++ +
Sbjct: 999 KEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQ-VDDLEGSLEQEKKLRMDLERAK 1057
Query: 519 AELDAGD 539
+L+ GD
Sbjct: 1058 RKLE-GD 1063
Score = 102 (35.9 bits), Expect = 0.28, P = 0.24
Identities = 47/173 (27%), Positives = 79/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ EL K ++ ++++ E S+
Sbjct: 1503 LKRENKNLQQEIS--DLTEQIAEGGKAIHELEKVKKQIEQEKSEIQAALEEAEASLEHEE 1560
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +++ ELN++KS E +RK+ E +E++QL K+N +R + L S
Sbjct: 1561 GKILRLQLELNQVKS---EIDRKIAEKDEEIDQL--KRN-----------HLRIVESLQS 1604
Query: 360 DAFEAYRRRN--IKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
R RN ++ KM NE Q SH N+ A + N + L+ Q LD
Sbjct: 1605 SLDAEIRSRNEALRLKKKMEGDLNEMEIQLSHANRVAAEAQKNLRNTQAVLKDTQIHLD 1663
Score = 91 (32.0 bits), Expect = 5.5, P = 1.0
Identities = 51/188 (27%), Positives = 85/188 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKIL----VDDAIGQLRSVTESINDRT 179
L + K+ L+ D L A+ E K L+ AK VDD G L + D
Sbjct: 997 LTKEKKALQEAHQQT-LDDLQAE-EDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLE 1054
Query: 180 RQIKKIKDEL----NKLKSLEDEYER---KLQEDAKELEQLQSKKNTYAAKEEEYAKKIR 338
R +K++ +L + + LE++ ++ KL++ E+ Q+QSK A + KKI+
Sbjct: 1055 RAKRKLEGDLKLAHDSIMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIK 1114
Query: 339 ELGPLTSDA---FEAYRRRNIK-DLHKM-LHRCNEQLQQFSHVNKKALDQYINFTEQRE- 500
EL + EA R K + H+ L R E++ + A I+ ++RE
Sbjct: 1115 ELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMNKKREA 1174
Query: 501 ELQKRQAELD 530
E QK + +L+
Sbjct: 1175 EFQKMRRDLE 1184
>gi|1345860|sp|P49025|CTRO_MOUSE CITRON PROTEIN >gi|2137218|pir||S68420 citron
- mouse >gi|1079734|gb|AAC52341.1| (U39904) citron [Mus musculus]
Length = 1597
Frame 3 hits (HSPs): _______ _______
Annotated Domains: __________________________________________________
__________________________________________________
Database sequence: | | | | | 1597
0 500 1000 1500
__________________
Annotated Domains:
BLOCKS BL00479A: Phorbol esters / diacylglycero 931..953
BLOCKS BL00479B: Phorbol esters / diacylglycero 956..971
BLOCKS BL00479C: Phorbol esters / diacylglycero 1252..1264
BLOCKS BL50003: PH domain proteins profile. 1437..1446
DOMO DM00151: PHORBOLESTERS/DIACYLGLYCEROLBIN 899..972
Entrez Domain: COILED COIL (POTENTIAL). 1..845
Entrez Domain: RHO/RAC BINDING. 674..870
Entrez Domain: POLY-LYS. 818..821
Entrez Domain: PHORBOL-ESTER AND DAG BINDING. 931..979
Entrez Domain: PH. 1011..1131
Entrez Domain: CNH. 1160..1457
Entrez Domain: SH3-BINDING (POTENTIAL). 1521..1526
PFAM DAG_PE-bind: Phorbol esters/diacylglycer 931..979
PFAM PH: PH domain 1012..1131
PFAM CNH: CNH domain 1160..1457
PRODOM PD075073: CTRO(1) O88938(1) 10..171
PRODOM PD000002: MYSP(25) MYSA(19) INVO(17) 173..354
PRODOM PD000002: MYSP(25) MYSA(19) INVO(17) 356..597
PRODOM PD000002: MYSP(25) MYSA(19) INVO(17) 612..853
PRODOM PD082663: CTRO(1) O88938(1) 855..917
PRODOM PD000215: KPC1(24) KPC2(14) KPCA(10) 919..979
PRODOM PD143273: CTRO(1) O88938(1) 981..1171
PRODOM PD014445: 1173..1421
PRODOM PD143272: CTRO(1) O88938(1) 1423..1596
__________________
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 0.00068, P = 0.00068
Identities = 45/192 (23%), Positives = 98/192 (51%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVD-----DAIGQLRSVTESIN 170
T L RR E+EAV+S + + ++ + E A + + ++ Q R +
Sbjct: 14 TRLHRRVSEVEAVLSQKEVELKASETQRSLLEQDLATYITECSSLKRSLEQARMEVSQED 73
Query: 171 DRTRQI-KKIKDELNKLKSL-EDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL 344
D+ Q+ I+++ KL+ + E EY+ +++E + QL+ + + + Y ++RE
Sbjct: 74 DKALQLLHDIREQSRKLQEIKEQEYQAQVEEMRLMMNQLEEDLVSARRRSDLYESELRE- 132
Query: 345 GPLTSDAFEAYRRRNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKR 515
L ++ F+ R+ N + HK++ ++ ++ ++S + K +Q + E +E+L+K
Sbjct: 133 SRLAAEEFK--RKAN-ECQHKLMKAKDQGKPEVGEYSKLEKINAEQQLKIQELQEKLEKA 189
Query: 516 -QAELDAGDRL-NLMQ 557
+A +A + L N+ Q
Sbjct: 190 VKASTEATELLQNIRQ 205
Score = 89 (31.3 bits), Expect = 7.7, P = 1.0
Identities = 50/199 (25%), Positives = 94/199 (47%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADAD--SLVA---DAESKWQELSDAKILVDDAIGQLRSVTES-- 164
+ LR+ K ELE + A+ + +L A + + K+ L ++ ++ D QL +TE
Sbjct: 485 SQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDALRNSCTVITDLEEQLNQLTEDNA 544
Query: 165 -INDRTRQIKK-------IKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEE 320
+N++ + K DE+ +L+S D R++ E +E+ QL S+K T A +
Sbjct: 545 ELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREITE--REM-QLTSQKQTMEALKTT 601
Query: 321 YA---KKIRELGPLTSDAFEAYRR----RNIKDLHKMLHRCN-EQLQQFSHVNKKA---L 467
+++ +L L + E R+ R++ K C +LQ+ K++
Sbjct: 602 CTMLEEQVLDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARA 661
Query: 468 DQYINFTEQREEL--QKRQAEL 527
DQ I + Q EL ++ +AE+
Sbjct: 662 DQRITESRQVVELAVKEHKAEI 683
>gi|3360514|gb|AAC27933.1| (AF070066) Citron-K kinase [Mus musculus]
Length = 1641
Frame 3 hits (HSPs): ______ _______
__________________________________________________
Database sequence: | | | | | 1641
0 500 1000 1500
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 0.00070, P = 0.00070
Identities = 45/192 (23%), Positives = 98/192 (51%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVD-----DAIGQLRSVTESIN 170
T L RR E+EAV+S + + ++ + E A + + ++ Q R +
Sbjct: 100 TRLHRRVSEVEAVLSQKEVELKASETQRSLLEQDLATYITECSSLKRSLEQARMEVSQED 159
Query: 171 DRTRQI-KKIKDELNKLKSL-EDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL 344
D+ Q+ I+++ KL+ + E EY+ +++E + QL+ + + + Y ++RE
Sbjct: 160 DKALQLLHDIREQSRKLQEIKEQEYQAQVEEMRLMMNQLEEDLVSARRRSDLYESELRE- 218
Query: 345 GPLTSDAFEAYRRRNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKR 515
L ++ F+ R+ N + HK++ ++ ++ ++S + K +Q + E +E+L+K
Sbjct: 219 SRLAAEEFK--RKAN-ECQHKLMKAKDQGKPEVGEYSKLEKINAEQQLKIQELQEKLEKA 275
Query: 516 -QAELDAGDRL-NLMQ 557
+A +A + L N+ Q
Sbjct: 276 VKASTEATELLQNIRQ 291
Score = 89 (31.3 bits), Expect = 7.9, P = 1.0
Identities = 50/199 (25%), Positives = 94/199 (47%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADAD--SLVA---DAESKWQELSDAKILVDDAIGQLRSVTES-- 164
+ LR+ K ELE + A+ + +L A + + K+ L ++ ++ D QL +TE
Sbjct: 529 SQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDALRNSCTVITDLEEQLNQLTEDNA 588
Query: 165 -INDRTRQIKK-------IKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEE 320
+N++ + K DE+ +L+S D R++ E +E+ QL S+K T A +
Sbjct: 589 ELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREITE--REM-QLTSQKQTMEALKTT 645
Query: 321 YA---KKIRELGPLTSDAFEAYRR----RNIKDLHKMLHRCN-EQLQQFSHVNKKA---L 467
+++ +L L + E R+ R++ K C +LQ+ K++
Sbjct: 646 CTMLEEQVLDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARA 705
Query: 468 DQYINFTEQREEL--QKRQAEL 527
DQ I + Q EL ++ +AE+
Sbjct: 706 DQRITESRQVVELAVKEHKAEI 727
>gi|4417214|dbj|BAA36971.1| (D10667) smooth muscle myosin heavy chain [Homo
sapiens]
Length = 1052
Frame 3 hits (HSPs): __________________________ __________
__________________________________________________
Database sequence: | | | | | | | || 1052
0 150 300 450 600 750 900 1050
Plus Strand HSPs:
Score = 120 (42.2 bits), Expect = 0.00080, P = 0.00080
Identities = 50/172 (29%), Positives = 85/172 (49%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQEL-SDAKILVDDAIGQLRSVTESINDRTR-Q 185
L +KQELE ++ +A + + E + Q+L ++ K + + + E R + Q
Sbjct: 27 LAAKKQELEEILHEMEAR--LEEEEDRGQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQ 84
Query: 186 IKKIKDELNKLKSLEDEY------ERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELG 347
++K+ E K+K LEDE KL ++ K LE+ S T A+EEE AK + +L
Sbjct: 85 LEKVTAEA-KIKKLEDEILVMDDQNNKLSKERKLLEERISDLTTNLAEEEEKAKNLTKL- 142
Query: 348 PLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAEL 527
+ E+ I +L L + + Q+ + +K +F EQ +LQ + AEL
Sbjct: 143 ---KNKHESM----ISELEVRLKKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAEL 195
Score = 106 (37.3 bits), Expect = 0.047, P = 0.046
Identities = 48/187 (25%), Positives = 96/187 (51%), Frame = +3
Query: 12 LRRRKQELEAVISS-----ADADSLVADAE----SKWQELSDAKILVDDAIGQLRSVTES 164
L + K++LE S AD + +A+ + K +EL A +DD I Q + +
Sbjct: 167 LEKLKRKLEGDASDFHEQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKK 226
Query: 165 INDRTRQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSK-KNTY---AAKEEEYAKK 332
I + I ++++L+ ++ ++ E++ ++ +ELE L+++ ++T A ++E AK+
Sbjct: 227 IRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKR 286
Query: 333 IRELGPLTSDAFEAYRR-----RNIKDLH-KMLHRCNEQLQQFSHVNKKALDQYINFTEQ 494
+E+ L E R + ++ H + + EQL+QF KA N +
Sbjct: 287 EQEVTVLKKALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRA--KA-----NLDKN 339
Query: 495 REELQKRQAELDAGD 539
++ L+K A+L AG+
Sbjct: 340 KQTLEKENADL-AGE 353
Score = 93 (32.7 bits), Expect = 1.6, P = 0.81
Identities = 36/160 (22%), Positives = 77/160 (48%), Frame = +3
Query: 69 LVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDEYERK 248
++ +AE K +L AK V QL+ E + + TRQ + +L +L+ + + +
Sbjct: 409 MLNEAEGKAIKL--AKD-VASLSSQLQDTQELLQEETRQKLNVSTKLRQLEEERNSLQDQ 465
Query: 249 LQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLHRCNE 428
L E+ + + L+ +T + + KK+++ T +A E ++R K++ + + E
Sbjct: 466 LDEEMEAKQNLERHISTLNIQLSDSKKKLQDFAS-TVEALEEGKKRFQKEIENLTQQYEE 524
Query: 429 QLQQFSHVNK------KALDQYI-NFTEQRE---ELQKRQAELD 530
+ + + K + LD + + QR+ L+K+Q + D
Sbjct: 525 KAAAYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQRKFD 568
Score = 89 (31.3 bits), Expect = 4.8, P = 0.99
Identities = 43/176 (24%), Positives = 81/176 (46%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRT-RQI 188
+ +K++LEA + + S +D E EL+D V ++ SVT +N+ + I
Sbjct: 364 VEHKKKKLEAQVQ--ELQSKCSDGERARAELNDK---VHKLQNEVESVTGMLNEAEGKAI 418
Query: 189 KKIKDELNKLKSLEDEYERKLQEDAKE-------LEQLQSKKNTYAAK--EEEYAKKIRE 341
K KD + L+D E LQE+ ++ L QL+ ++N+ + EE AK+ E
Sbjct: 419 KLAKDVASLSSQLQDTQEL-LQEETRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLE 477
Query: 342 LGPLTSDAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQA 521
T + + ++ ++D + E ++F + QY ++L+K +
Sbjct: 478 RHISTLNIQLSDSKKKLQDFASTVEALEEGKKRFQKEIENLTQQYEEKAAAYDKLEKTKN 537
Query: 522 EL 527
L
Sbjct: 538 RL 539
Score = 88 (31.0 bits), Expect = 6.3, P = 1.0
Identities = 44/181 (24%), Positives = 78/181 (43%), Frame = +3
Query: 12 LRRRKQELEAVISSADAD-SLVADAESKWQ-ELSDAKILVDDAIGQLRSVTESINDRTRQ 185
L+R+ E E + + +L A A+ K + +L D ++ D AI + + Q
Sbjct: 708 LQRQLHEYETELEDERNERALAAAAKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQ 767
Query: 186 IKKIKDELNKLKSLEDEYERKLQED---AKELE-QLQSKKNTYAAKEEEYAKKIRELGPL 353
+K + EL ++ DE +E+ AK LE L + AA E + E L
Sbjct: 768 MKDFQRELEDARASRDEIFATAKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEEL 827
Query: 354 TSDAFEAYRRRN-IKD----LHKMLHRCNEQLQQFSHVNKKAL-DQYINFTEQREELQKR 515
+ + RN ++D L + + E+L++ N +A+ D+ T+Q E+L
Sbjct: 828 AEELASSLSGRNALQDEKRRLEARIAQLEEELEE-EQGNMEAMSDRVRKATQQAEQLSNE 886
Query: 516 QA 521
A
Sbjct: 887 LA 888
>gi|11024712 ref|NP_060003.1| myosin, heavy polypeptide 4, skeletal muscle
[Homo sapiens] >gi|4808811|gb|AAD29949.1| (AF111783) myosin heavy
chain IIb [Homo sapiens]
Length = 1939
Frame 3 hits (HSPs): ______ _____
__________________________________________________
Database sequence: | | | | | 1939
0 500 1000 1500
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 0.00084, P = 0.00084
Identities = 37/172 (21%), Positives = 87/172 (50%), Frame = +3
Query: 21 RKQELEAVIS-SADADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKI 197
RK+ ++V DSL + +E S+ K+ ++D + +V+++ + + + +
Sbjct: 1197 RKKHADSVAELGKQIDSLQRVKQKLEKEKSELKMEINDLASNMETVSKAKANFEKMCRTL 1256
Query: 198 KDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAY 377
+D+L+++K+ E+E +R + E + + +L ++ ++ + +E + +L S +A+
Sbjct: 1257 EDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSRQLDEKDAMVSQL----SRGKQAF 1312
Query: 378 RRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAG 536
++ I++L + L + +H + A EQ EE Q+ +AEL G
Sbjct: 1313 TQQ-IEELKRQLEEETKAKSTLAHALQSARHDCDLLREQYEEEQEAKAELQRG 1364
Score = 107 (37.7 bits), Expect = 0.070, P = 0.067
Identities = 49/173 (28%), Positives = 78/173 (45%), Frame = +3
Query: 12 LRRRKQELEAVISSADADSLVADAESKWQELSDAKILVDDAIGQLRSVTE----SINDRT 179
L+R + L+ IS D +A+ EL K +D +L++ E S+
Sbjct: 1502 LKRENKNLQQEIS--DLTEQIAEGGKHIHELEKVKKQLDHEKSELQTSLEEAEASLEHEE 1559
Query: 180 RQIKKIKDELNKLKSLEDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTS 359
+I +I+ ELN++KS E +RK+ E +EL+QL K+N E + T
Sbjct: 1560 GKILRIQLELNQVKS---EIDRKIAEKDEELDQL--KRNHLRVVESMQS---------TL 1605
Query: 360 DAFEAYRRRNIKDLHKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELD 530
DA R ++ KM NE Q +H N++A + N + L+ Q LD
Sbjct: 1606 DAEIRSRNDALRIKKKMEGDLNEMEIQLNHANRQAAEALRNLRNTQGILKDTQLHLD 1662
>gi|3599509|gb|AAC72823.1| (AF086824) rho/rac-interacting citron kinase [Mus
musculus]
Length = 2055
Frame 3 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | | 2055
0 500 1000 1500 2000
Plus Strand HSPs:
Score = 122 (42.9 bits), Expect = 0.00089, P = 0.00089
Identities = 45/192 (23%), Positives = 98/192 (51%), Frame = +3
Query: 6 TNLRRRKQELEAVISSADADSLVADAESKWQELSDAKILVD-----DAIGQLRSVTESIN 170
T L RR E+EAV+S + + ++ + E A + + ++ Q R +
Sbjct: 472 TRLHRRVSEVEAVLSQKEVELKASETQRSLLEQDLATYITECSSLKRSLEQARMEVSQED 531
Query: 171 DRTRQI-KKIKDELNKLKSL-EDEYERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIREL 344
D+ Q+ I+++ KL+ + E EY+ +++E + QL+ + + + Y ++RE
Sbjct: 532 DKALQLLHDIREQSRKLQEIKEQEYQAQVEEMRLMMNQLEEDLVSARRRSDLYESELRE- 590
Query: 345 GPLTSDAFEAYRRRNIKDLHKMLHRCNE---QLQQFSHVNKKALDQYINFTEQREELQKR 515
L ++ F+ R+ N + HK++ ++ ++ ++S + K +Q + E +E+L+K
Sbjct: 591 SRLAAEEFK--RKAN-ECQHKLMKAKDQGKPEVGEYSKLEKINAEQQLKIQELQEKLEKA 647
Query: 516 -QAELDAGDRL-NLMQ 557
+A +A + L N+ Q
Sbjct: 648 VKASTEATELLQNIRQ 663
WARNING: HSPs involving 1352 database sequences were not reported due to the
limiting value of parameter B = 50.
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.93
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.310 0.127 0.330 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.397 0.182 0.784
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.358 0.155 0.556
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.365 0.161 0.610
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.354 0.160 0.534
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.337 0.138 0.431
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 185 184 10. 76 3 12 23 0.098 35
31 0.12 37
+2 0 185 184 10. 76 3 12 22 0.12 34
31 0.12 37
+1 0 186 185 10. 76 3 12 22 0.12 34
31 0.12 37
-1 0 186 185 10. 76 3 12 22 0.12 34
31 0.12 37
-2 0 185 185 10. 76 3 12 22 0.12 34
31 0.12 37
-3 0 185 184 10. 76 3 12 22 0.12 34
31 0.12 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 1402
No. of states in DFA: 594 (59 KB)
Total size of DFA: 193 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 189.24u 1.10s 190.34t Elapsed: 00:00:33
Total cpu time: 189.39u 1.14s 190.53t Elapsed: 00:00:33
Start: Sat Feb 2 07:37:49 2002 End: Sat Feb 2 07:38:22 2002
WARNINGS ISSUED: 2
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000