NCBI

NLM

PubMed Nucleotide Protein Genome Structure PopSet Taxonomy OMIM Books SNP
Search for SNP on NCBI Reference Assembly
Spacer gif
BUILD 129
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Report in Submission Format
SNP:  Handle|local_snp_id:   SI_MHC_SNP | AL662873.3_81953_AT
  NCBI Assay Id(ss#):    ss12684053
  Reference SNP Id(rs#): rs9262047

Batch Detail:
Submitter Handle:           SI_MHC_SNP
Submitter Batch ID:         2003_09_10
Entry Date:                 Sep 10, 2003
Molecular type:             Genomic
No. of Chromosomes sampled: 3
Synonym defined:            
Organism:                   Homo sapiens
Population:                 Not submitted
Submitter Method ID:        MHC_XM20030904
Citation:
   1. The MHC haplotype project: A resource for HLA-linked association
   studies

   View citation details:[1] 

  SubSNP Detail:
  NCBI Assay ID:       ss12684053
  Submitter SNP ID:    AL662873.3_81953_AT
  Synonyms:            
  LOCUSID:             Not submitted
  Submitter STS ID:    Not submitted
  STS Accession:       Not submitted
  GenBanK Accession:   AL662873.3 
  Comment:
     sequence: AL662822.4
     position: 94294
     quality: [40]
     sequence: AL844213.2
     position: 37146
     quality: [40]

  Gene Name:           
  Length:              801
  Flanking Sequence Information:

  5' Assay:   tgccgtgtct gtgtagaaag aagtagacat gggagacttt tcattttgtt ctgtactaag
              aaaaattctt ctgccttggg atcctgttga tctgtgacct tacccccaac cctgtgctct
              ctgaaacatg tgctgtgtcc actcagggtt aaatggatta agggtggtgc aagatgtgct
              tcgttaaaca gatgcttgaa ggcagcatgc tcgttaagag tcatcaccac tccctaatct
              caagtaccca gggacacaaa cactgcggaa ggccgcagag tcctctgcct aggaaaacca
              gagacctttg ttcacttgtt tatctgctga ccttccctcc actattgtcc tatgaccctg
              ccaaatcccc ctctgtgaga aatacccaag aatgatcaat
  Observed:   A/T
  3' Assay:   aaaaaaaaaa aaaaaaTGGT AATTTAAAAA ATTACCggcc gggcgcagtg gctcacgcct
              gtagtcccag cactttggga ggcctaggcg ggcagatcac ctgaggtcgg gagtttgaga
              ccagcctgac caacatggag aaactccgtc tcttctaaaa atacaaaaaa attagccagg
              ggtggtggta catgcctgga atcccagcta ctcgggaggc tgaggcagga gaatcacttg
              aacccaggaa gtggaggttg cagtgagcag agaccgtgct attgcactcc agcctgggcg
              acaagagtga aactccacct caaagaaaaa aaaaaaggta ccaacaacaa aaaaaagccc
              agaaccagat ggatgcacag cggaattcta tcagaCATTC

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION:
FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
HAPLOTYPE:Submission | Specifications | Sample HapSet | Sample Individual
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement

Revised: May 25, 2006 1:38 PM .