R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|7460098|pir||T05076 hypothetical protein T6K21.80 - Arabidopsis thaliana
>gi|2894599|emb|CAA17133.1| (AL021889) putative protein
[Arabidopsis thaliana] >gi|7268542|emb|CAB78792.1| (AL161547)
putative protein [Arabidopsis thaliana]
Length = 254
Frame 2 hits (HSPs): _________________________
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 425 (149.6 bits), Expect = 6.9e-39, P = 6.9e-39
Identities = 78/123 (63%), Positives = 91/123 (73%), Frame = +2
Query: 137 MAIENQDNTVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSEC 316
MAIE+Q+NT+REIKPKNRRIMGAGGP++++NRWPPWLKPLLKE FFV CK H DSHKSEC
Sbjct: 1 MAIEDQENTIREIKPKNRRIMGAGGPEEEENRWPPWLKPLLKEQFFVHCKFHGDSHKSEC 60
Query: 317 NMLLLGLYEWPLCSLCLAHHKDHRAIQIXSPHTMMLIRXSXIQKVFGLTGVQPTLSTAQG 496
NM L PLCSLCLAHHKDHR IQI +IR + IQK + G+Q + +
Sbjct: 61 NMYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLDIGGIQTYVINSAK 120
Query: 497 XVF 505
VF
Sbjct: 121 VVF 123
>gi|6714272|gb|AAF25968.1|AC017118_5 (AC017118) F6N18.8 [Arabidopsis thaliana]
Length = 270
Frame 2 hits (HSPs): _____________________________
__________________________________________________
Database sequence: | | | | | | | 270
0 50 100 150 200 250
Plus Strand HSPs:
Score = 303 (106.7 bits), Expect = 5.8e-26, P = 5.8e-26
Identities = 74/152 (48%), Positives = 91/152 (59%), Frame = +2
Query: 50 FSSIFLKKQKHEKSSTLSHSLSLSLLSTNMAIE---NQDNTVREIKPKNRRIMGAGGPDD 220
F S+ QK S SL L S +AIE +Q+ T+REIK + A ++
Sbjct: 8 FGSLNPPYQKQGLSQL--RSLGSVLGSKKLAIEENHHQEATIREIKALQHKNQHA---EE 62
Query: 221 DDNR-WPPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAHHKDHRAIQ 397
+ N+ +P WLKPLL+E FFVQCKLHADSHKSECNM L PLCSLCL+ HKDH AIQ
Sbjct: 63 ETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQ 122
Query: 398 IXSPHTMMLIRXSXIQKVFGLTGVQPTLSTAQGXVF 505
I +IR S IQK +TGVQ + + VF
Sbjct: 123 IRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVF 158
>gi|12643058|gb|AAK00447.1|AC060755_17 (AC060755) unknown protein [Oryza
sativa]
Length = 254
Frame 2 hits (HSPs): ___________________________
__________________________________________________
Database sequence: | | | | | || 254
0 50 100 150 200 250
Plus Strand HSPs:
Score = 264 (92.9 bits), Expect = 7.9e-22, P = 7.9e-22
Identities = 62/137 (45%), Positives = 81/137 (59%), Frame = +2
Query: 137 MAIENQDNTVREIKPKNRRIMGAGGPDDDDN-------RWPPWLKPLLKESFFVQCKLHA 295
MAI+++ + +E++ KNRRIMG GGP+ ++ +WP WL PLL SFF QCK+HA
Sbjct: 1 MAIDHE-SPFKELRLKNRRIMGGGGPEPEEEEAVAHGEQWPRWLSPLLSASFFSQCKVHA 59
Query: 296 DSHKS-ECNMLLLGLYE------WPLCSLCLAH-HKDHRAIQIXSPHTMMLIRXSXIQKV 451
DSH+S ECNM L LCSLCLAH H+DH IQI +IR S IQ+
Sbjct: 60 DSHRSGECNMFCLDCAADADAAAAALCSLCLAHNHRDHHTIQIRRSSYHDVIRVSDIQRF 119
Query: 452 FGLTGVQPTLSTAQGXVF 505
+ GVQ + + VF
Sbjct: 120 MDIGGVQTYVINSARVVF 137
>gi|9758507|dbj|BAB08915.1| (AB016882) gene_id:MZA15.12~pir||T05076~similar to
unknown protein [Arabidopsis thaliana]
Length = 226
Frame 2 hits (HSPs): __________________________
__________________________________________________
Database sequence: | | | | | | 226
0 50 100 150 200
Plus Strand HSPs:
Score = 245 (86.2 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 50/123 (40%), Positives = 69/123 (56%), Frame = +2
Query: 137 MAIENQDNTVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKESFFVQCKLHADSHKSEC 316
MAIE+ +N REIKPKNRR M + +N+WP WLKPLL + FF QCK H ++EC
Sbjct: 1 MAIEDYENPNREIKPKNRRFM------EGENQWPIWLKPLLNQHFFAQCKFHGHLPRTEC 54
Query: 317 NMLLLGLYEWPLCSLCLAHHKDHRAIQIXSPHTMMLIRXSXIQKVFGLTGVQPTLSTAQG 496
M L CSLCL+ H++HR IQI + + IQK ++ +Q + +
Sbjct: 55 KMYCLDCTNDSFCSLCLSEHENHRTIQIRISSYHNVTKVDEIQKYLDISSIQTYVINSSK 114
Query: 497 XVF 505
+F
Sbjct: 115 VLF 117
>gi|4836888|gb|AAD30591.1|AC007369_1 (AC007369) Unknown protein [Arabidopsis
thaliana]
Length = 243
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 243
0 50 100 150 200
Plus Strand HSPs:
Score = 203 (71.5 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 38/97 (39%), Positives = 55/97 (56%), Frame = +2
Query: 215 DDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAHHKDHRAI 394
+++D PPWL P+L+ S+FV C +H DS+K+ECN+ L CS CL HKDHR +
Sbjct: 6 EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVV 65
Query: 395 QIXSPHTMMLIRXSXIQKVFGLTGVQPTLSTAQGXVF 505
QI ++R + IQK + VQ + + VF
Sbjct: 66 QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVF 102
>gi|12323060|gb|AAG51520.1|AC068324_8 (AC068324) hypothetical protein
[Arabidopsis thaliana]
Length = 216
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 216
0 50 100 150 200
Plus Strand HSPs:
Score = 199 (70.1 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 37/86 (43%), Positives = 51/86 (59%), Frame = +2
Query: 215 DDDDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAHHKDHRAI 394
++DD PPWL P+L+ +FV C +H+ S KSECN+ L CS CLAHH+ HR I
Sbjct: 2 ENDDVMTPPWLTPMLRADYFVTCSIHSQSSKSECNLFCLDCSGNAFCSSCLAHHRTHRVI 61
Query: 395 QIXSPHTMMLIRXSXIQKVFGLTGVQ 472
QI ++R S IQK ++ +Q
Sbjct: 62 QIRRSSYHNVVRVSEIQKHIDISCIQ 87
>gi|12323979|gb|AAG51950.1|AC015450_11 (AC015450) unknown protein; 77280-78196
[Arabidopsis thaliana]
Length = 242
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 242
0 50 100 150 200
Plus Strand HSPs:
Score = 190 (66.9 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 35/90 (38%), Positives = 53/90 (58%), Frame = +2
Query: 236 PPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAHHKDHRAIQIXSPHT 415
PPWL P+L+ ++F+ C +HA S+KSECNM L CS CL +H++HR +QI
Sbjct: 15 PPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRRSSY 74
Query: 416 MMLIRXSXIQKVFGLTGVQPTLSTAQGXVF 505
++R + IQK ++ VQ + + VF
Sbjct: 75 HNVVRVNEIQKYIDISCVQTYIINSARIVF 104
>gi|4510423|gb|AAD21509.1| (AC006929) unknown protein [Arabidopsis thaliana]
Length = 135
Frame 2 hits (HSPs): ______________________________
__________________________________________________
Database sequence: | | | | 135
0 50 100
Plus Strand HSPs:
Score = 129 (45.4 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/80 (33%), Positives = 40/80 (50%), Frame = +2
Query: 236 PPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAH-HKDHRAIQIXSPH 412
P WL+ LL+ +FF C H ++ ++ECNM L C C + H DH +QI
Sbjct: 4 PKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIRRSS 63
Query: 413 TMMLIRXSXIQKVFGLTGVQ 472
++R S I+ + GVQ
Sbjct: 64 YHDVVRVSEIENALDIRGVQ 83
>gi|11280631|pir||T47878 hypothetical protein T4C21.80 - Arabidopsis thaliana
>gi|7329677|emb|CAB82671.1| (AL162295) putative protein
[Arabidopsis thaliana]
Length = 245
Frame 2 hits (HSPs): ____________________
__________________________________________________
Database sequence: | | | | | | 245
0 50 100 150 200
Plus Strand HSPs:
Score = 125 (44.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 29/95 (30%), Positives = 46/95 (48%), Frame = +2
Query: 221 DDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAHHKDHRAIQI 400
+ +P WL+ LLK+ FF C H D K+E N+L + +C CL+ H HR +QI
Sbjct: 2 ESGEFPAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCC-LTICPHCLSSHTSHRLLQI 60
Query: 401 XSPHTMMLIRXSXIQKVFGLTGVQPTLSTAQGXVF 505
++R K+ + +QP + + VF
Sbjct: 61 RRYVYRDVLRVEDGSKLMDCSLIQPYTTNSSKVVF 95
>gi|9755373|gb|AAF98180.1|AC000107_3 (AC000107) F17F8.4 [Arabidopsis thaliana]
Length = 241
Frame 2 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | | | 241
0 50 100 150 200
Plus Strand HSPs:
Score = 124 (43.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/86 (33%), Positives = 47/86 (54%), Frame = +2
Query: 236 PPWLKPLLKESFFVQCKLHADSHKSECNMLLLGLYEWPLCSLCLAHHKDHRAIQIXSPHT 415
P WL+ L+ E+FF C +H KSE N+ L L +C CL H+ H +Q+
Sbjct: 19 PAWLEGLMAETFFSSCGIHETRRKSEKNVFCL-LCCLSVCPHCLPSHRSHPLLQVRRYVY 77
Query: 416 MMLIRXSXIQKVFGLTGVQP-TLSTAQ 493
++R S ++K+ + VQP T++ A+
Sbjct: 78 HDVVRLSDLEKLIDCSYVQPYTINGAK 104
>gi|5441885|dbj|BAA82383.1| (AP000367) Similar to Arabidopsis thaliana BAC
genomic sequence. (AL021889) [Oryza sativa]
Length = 306
Frame 2 hits (HSPs): _______ ________
__________________________________________________
Database sequence: | | | | | | | | 306
0 50 100 150 200 250 300
Plus Strand HSPs:
Score = 73 (25.7 bits), Expect = 1.4, Sum P(2) = 0.74
Identities = 14/34 (41%), Positives = 17/34 (50%), Frame = +2
Query: 230 RWPPWLKPLLKESFFVQCKLHADSHKSECNMLLL 331
R P WL+ LL FF C H ++ECN L
Sbjct: 17 REPAWLRSLLGARFFEACAAHRGMSRNECNQYCL 50
Score = 49 (17.2 bits), Expect = 1.4, Sum P(2) = 0.74
Identities = 12/44 (27%), Positives = 21/44 (47%), Frame = +2
Query: 374 HKDHRAIQIXSPHTMMLIRXSXIQKVFGLTGVQPTLSTAQGXVF 505
H+ HR +Q+ ++R S +++ LT VQ + VF
Sbjct: 85 HR-HRVVQVRRSSYHNVVRVSELERTLDLTRVQTYVINRDRVVF 127
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.339 0.140 0.444
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.325 0.137 0.430
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.352 0.152 0.565
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.151 0.499
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.346 0.150 0.525
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.350 0.151 0.541
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 168 165 10. 75 3 12 22 0.10 34
30 0.10 37
+2 0 169 165 10. 75 3 12 22 0.10 34
30 0.10 37
+1 0 169 165 10. 75 3 12 22 0.10 34
30 0.10 37
-1 0 169 166 10. 75 3 12 22 0.10 34
30 0.10 37
-2 0 169 165 10. 75 3 12 22 0.10 34
30 0.10 37
-3 0 168 165 10. 75 3 12 22 0.10 34
30 0.10 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 11
No. of states in DFA: 593 (58 KB)
Total size of DFA: 203 KB (256 KB)
Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 163.39u 1.09s 164.48t Elapsed: 00:00:28
Total cpu time: 163.42u 1.11s 164.53t Elapsed: 00:00:28
Start: Mon Oct 1 23:41:44 2001 End: Mon Oct 1 23:42:12 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000