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UGID:2138759     UniGene Hs.631865     Homo sapiens (human)   CROCCL1 Order cDNA clone, Links
Ciliary rootlet coiled-coil, rootletin-like 1 (CROCCL1)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_001154238.1 PREDICTED: similar to KIAA0445 protein P. troglodytes 86.2 209
NP_055490.3 ciliary rootlet coiled-coil, rootletin H. sapiens 81.2 809
NP_742120.1 ciliary rootlet coiled-coil, rootletin M. musculus 69.3 798
XP_688293.3 PREDICTED: similar to ciliary rootlet coiled-coil, rootletin D. rerio 46.9 239

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; stomach; placenta; lung; prostate; embryonic tissue; blood; uterus; uncharacterized tissue; liver; testis; intestine; pancreas; pharynx; kidney; mammary gland; eye; adrenal gland; amniotic fluid; muscle; connective tissue; trachea; ear; ganglia; skin; ovary; bone; lymph; spleen; bone marrow; nerve; lymph node; heart; cervix; mouth; thyroid; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.13
UniSTS entry: Chr 1 RH64845
UniSTS entry: Chr 1 SHGC-31788 [Map Viewer]
UniSTS entry: Chr 1 RH25727
UniSTS entry: Chr Y RH79802
UniSTS entry: Chr Y D15S1477
UniSTS entry: Chr Y (n/a)
UniSTS entry: Chr Y D10S275
UniSTS entry: Chr Y D11S3114
UniSTS entry: Chr Y sY3084
UniSTS entry: Chr Y GDB:631813
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BC047736.1 Homo sapiens ciliary rootlet coiled-coil, rootletin-like 1, mRNA (cDNA clone MGC:54095 IMAGE:6197712), complete cds PA
BC051002.1 Homo sapiens hypothetical protein MGC12760, mRNA (cDNA clone IMAGE:6278488), partial cds A
AK128484.1 Homo sapiens cDNA FLJ46630 fis, clone TRACH2019080, weakly similar to Rootletin (Ciliary rootlet coiled-coil protein) P
AK123337.1 Homo sapiens cDNA FLJ41343 fis, clone BRAWH2001973 P
AK123071.1 Homo sapiens cDNA FLJ41076 fis, clone ADRGL2002013
DQ786196.1 Homo sapiens clone HLS_IMAGE_126229 mRNA sequence PA
BC006312.2 Homo sapiens ciliary rootlet coiled-coil, rootletin-like 1, mRNA (cDNA clone MGC:12760 IMAGE:4111573), complete cds PA
BC127868.1 Homo sapiens cDNA clone IMAGE:40133403, partial cds
BC010508.1 Homo sapiens ciliary rootlet coiled-coil, rootletin-like 1, mRNA (cDNA clone IMAGE:4149360), partial cds PA
AK054737.1 Homo sapiens cDNA FLJ30175 fis, clone BRACE2000988 P
AK090414.1 Homo sapiens mRNA for FLJ00313 protein P
BC015342.1 Homo sapiens ciliary rootlet coiled-coil, rootletin-like 1, mRNA (cDNA clone IMAGE:4446479), with apparent retained intron A

EST sequences (247)

AA993274.1 Clone IMAGE:1623933 embryonic tissue 3' read A
AA993931.1 Clone IMAGE:1628848 mixed 3' read A
AI051528.1 Clone IMAGE:1659097 embryonic tissue 3' read A
AI056804.1 Clone IMAGE:1675415 mixed 3' read
AI092070.1 Clone IMAGE:1694326 heart 3' read A
AI125144.1 Clone IMAGE:1539473 brain 3' read
AI125506.1 Clone IMAGE:1736667 testis 3' read A
AI219666.1 Clone IMAGE:1841196 mixed 3' read A
AI252232.1 Clone IMAGE:1978240 brain 3' read A
AI264372.1 Clone IMAGE:1872756 intestine 3' read A
AI269445.1 Clone IMAGE:1864771 kidney 3' read
AI198383.1 Clone IMAGE:1861087 brain 3' read A
AI281163.1 Clone IMAGE:1873155 intestine 3' read A
AI285072.1 Clone IMAGE:1873009 intestine 3' read A
AI362894.1 Clone IMAGE:2018388 brain 3' read A
AI377649.1 Clone IMAGE:2090761 mixed 3' read A
AI380433.1 Clone IMAGE:2107618 uncharacterized tissue 3' read A
AI590696.1 Clone IMAGE:2266698 mouth 3' read A
AI561279.1 Clone IMAGE:2209685 uterus 3' read A
AI693640.1 Clone IMAGE:2337838 lung 3' read A
AI767754.1 Clone IMAGE:2383117 kidney 3' read A
AI798104.1 Clone IMAGE:2387132 uncharacterized tissue 3' read A
AI810288.1 Clone IMAGE:2312297 prostate 3' read A
AL041253.1 Clone DKFZp434L1216 testis 5' read A
BX281030.1 Clone IMAGp998G2110036_;_IMAGE:4373804 testis
AI926403.1 Clone IMAGE:2459227 stomach 3' read A
AI936459.1 Clone IMAGE:2329437 mixed 3' read A
AI937445.1 Clone IMAGE:2467778 brain 3' read A
AI872964.1 Clone IMAGE:2342681 lung 3' read
BX362629.2 Clone CS0DK002YH07 cervix 3' read P
BX362630.2 Clone CS0DK002YH07 cervix 5' read P
BX413793.2 Clone CS0DF035YM11 brain 3' read A
BX447906.2 Clone CS0DH008YL23 blood 3' read
BX447907.2 Clone CS0DH008YL23 blood 5' read P
BX463045.2 Clone CS0DM004YL15 liver 5' read P
AI978863.1 Clone IMAGE:2492111 uterus 3' read A
AI984241.1 Clone IMAGE:2562171 lung 3' read A
AI992074.1 Clone IMAGE:2500079 brain 3' read A
CD365434.1 Clone UI-H-FT2-bjj-n-07-0-UI lung 3' read A
CD709718.1 pharynx
BX643379.1 Clone DKFZp781G2226 uncharacterized tissue 5' read
CF541332.1 Clone UI-CF-EC1-adz-n-21-0-UI lung 3' read PA
AW205223.1 Clone IMAGE:2720064 mixed 3' read A
D25801.1 Clone cm1489 intestine 3' read A
AW339274.1 Clone IMAGE:2871401 lung 3' read
AW393374.1 stomach
CK003289.1 Clone IMAGE:30720323 brain 5' read
AW471321.1 Clone IMAGE:2832137 pancreas 3' read A
AW473536.1 Clone IMAGE:2882332 uterus 3' read A
AW673790.1 Clone IMAGE:2985584 cervix 3' read A
AW795204.1 uterus
R78855.1 Clone IMAGE:146544 placenta 5' read
CK820796.1 Clone IMAGE:5086324 pancreas 5' read A
R79344.1 Clone IMAGE:146544 placenta 3' read
AW836287.1 uncharacterized tissue
R80830.1 Clone IMAGE:146491 placenta 5' read
H00323.1 Clone IMAGE:149616 placenta 3' read
H00374.1 Clone IMAGE:149616 placenta 5' read
AW888432.1 brain
CN264703.1 embryonic tissue 5' read
AW954791.1 uncharacterized tissue
CN279208.1 embryonic tissue 5' read P
CN395232.1 embryonic tissue 5' read
CN395229.1 embryonic tissue 5' read
AW969720.1 uncharacterized tissue
AJ707722.1 Clone CMPD01939 heart
BE159683.1 thyroid
BE327568.1 Clone IMAGE:3179473 lung 3' read
CV388953.1 uterus
H29586.1 Clone IMAGE:52899 brain 3' read A
AV648724.1 Clone GLCBME02 liver 3' read P
BE675852.1 Clone IMAGE:3294922 uncharacterized tissue 3' read A
CX786207.1 Clone IMAGE:7481075 embryonic tissue 5' read
H47631.1 Clone IMAGE:193634 mixed 3' read A
H47934.1 Clone IMAGE:193634 mixed 5' read
BE769003.1 prostate
BE774579.1 uterus
BE812151.1 amniotic fluid
BE812236.1 amniotic fluid
BE815945.1 mammary gland
AV683517.1 Clone GKCGPG08 liver 5' read
AV684297.1 Clone GKCGEF08 liver 5' read
AV685432.1 Clone GKCGEG06 liver 5' read
AV692719.1 Clone GKCGHB10 liver 5' read
AV693161.1 Clone GKCGPA12 liver 5' read
AV693789.2 Clone GKCGHC02 liver 5' read
AV693792.1 Clone GKCGHC03 liver 5' read
AV697266.1 Clone GKCGEC10 liver 5' read
AV700892.1 Clone GKCGEA05 liver 3' read
DN995105.1 Clone TC102164 brain 5' read
DN997107.1 Clone TC103936 mammary gland 5' read P
BF082455.1 mammary gland
CR991460.1 Clone RZPDp9017N1113 uncharacterized tissue 5' read P
CR995941.1 Clone RZPDp9017O0817 uncharacterized tissue 5' read P
CT000663.1 Clone RZPDp9016I1618 uncharacterized tissue 5' read P
BY796975.2 Clone HE2034.seq eye 5' read
BY798688.2 Clone HE3747.seq eye 5' read
BF203946.1 Clone IMAGE:4111573 muscle 5' read P
H61073.1 Clone IMAGE:206150 mixed 3' read A
H61640.1 Clone IMAGE:206150 mixed 5' read
DA306445.1 Clone BRHIP2023005 brain 5' read P
DA313109.1 Clone BRHIP3002498 brain 5' read P
DA268013.1 Clone BRCAN2021827 brain 5' read
DA241352.1 Clone BRAWH3039121 brain 5' read
H65761.1 Clone IMAGE:211270 mixed 5' read
H65762.1 Clone IMAGE:211270 mixed 3' read
DA085810.1 Clone BRACE2040284 brain 5' read
DA198729.1 Clone BRAWH2001973 brain 5' read P
DA211846.1 Clone BRAWH3001180 brain 5' read
DA212759.1 Clone BRAWH3002316 brain 5' read
DA285185.1 Clone BRCOC2015487 brain 5' read P
DA318537.1 Clone BRHIP3010304 brain 5' read
DA103548.1 Clone BRACE3016579 brain 5' read
DA104011.1 Clone BRACE3017213 brain 5' read
DA300031.1 Clone BRHIP2014262 brain 5' read
DA106914.1 Clone BRACE3021441 brain 5' read
DA224543.1 Clone BRAWH3017618 brain 5' read
DA114927.1 Clone BRACE3033727 brain 5' read
DA154231.1 Clone BRAMY2012898 brain 5' read
DA076470.1 Clone BRACE2028566 brain 5' read P
DA010427.1 Clone ADRGL2002013 adrenal gland 5' read
DA077443.1 Clone BRACE2029791 brain 5' read
BF851018.1 lung
BF853760.1 lung
DA553554.1 Clone HCHON2003393 connective tissue 5' read P
DA554759.1 Clone HCHON2004851 connective tissue 5' read P
DA490566.1 Clone FCBBF3001817 brain 5' read
DA525420.1 Clone FEBRA2016909 brain 5' read P
DA691458.1 Clone NT2NE2011153 5' read P
DA758522.1 Clone NT2RP8006374 testis 5' read P
DA921807.1 Clone SMINT2007588 intestine 5' read P
BF432771.1 Clone IMAGE:3565762 lung 3' read
BF433416.1 Clone IMAGE:3703082 lung 3' read
DA781103.1 Clone OCBBF2016521 brain 5' read
DA814462.1 Clone PEBLM2001676 blood 5' read P
DA815890.1 Clone PEBLM2003485 blood 5' read P
DA777478.1 Clone OCBBF2011881 brain 5' read P
DA928596.1 Clone SMINT2016101 intestine 5' read P
BF530568.1 Clone IMAGE:4214720 brain 5' read
DA976690.1 Clone SYNOV2007455 connective tissue 5' read
BF477823.1 Clone IMAGE:3706487 lung 3' read
DB296503.1 Clone BRACE2000988 brain 3' read
H82778.1 Clone IMAGE:198761 mixed 5' read
BF739875.1 Clone IMAGE:3576519 kidney 3' read A
DB052653.1 Clone TESTI2042921 testis 5' read P
DB348634.1 Clone TRACH2019080 trachea 3' read A
DB283866.1 Clone UTERU3011581 uterus 5' read
DB206686.1 Clone TRACH2019080 trachea 5' read P
DB252965.1 Clone UTERU2007393 uterus 5' read
DB295245.1 Clone ADRGL2002013 adrenal gland 3' read
DW417364.1 liver
H88891.1 Clone IMAGE:253192 ear 5' read
H88892.1 Clone IMAGE:253192 ear 3' read
BF845461.1 mouth
BG106669.1 Clone IMAGE:4385521 lymph 5' read P
BF979675.1 Clone IMAGE:4373804 testis 5' read P
BF980318.1 Clone IMAGE:4373804 testis 3' read
BF933454.1 brain P
BF903804.1 blood
BF911734.1 uterus
BF912867.1 uterus
BG163419.1 Clone IMAGE:4446479 kidney 5' read
DB568282.1 Clone H033065A21 brain 3' read A
BG054582.1 Clone IMAGE:3303071 ganglia 3' read A
AL521224.3 Clone CS0DB001YA22 uncharacterized tissue 5' read P
DB497232.1 Clone H033065A21 brain 5' read P
DB514014.1 Clone H013038M11 testis 3' read A
AL533929.3 Clone CS0DF003YJ13 brain 5' read P
AL539858.3 Clone CS0DF031YL15 brain 5' read P
AL539942.3 Clone CS0DF031YH07 brain 3' read P
AL539943.3 Clone CS0DF031YH07 brain 5' read P
AL542034.3 Clone CS0DE009YE01 placenta 3' read P
AL542035.3 Clone CS0DE009YE01 placenta 5' read P
AL565322.2 Clone CS0DF003YJ13 brain 3' read
BG388379.1 Clone IMAGE:4521814 uncharacterized tissue 5' read P
BG393693.1 Clone IMAGE:4540756 uncharacterized tissue 5' read P
DT217505.1 brain
D31070.1 lung 5' read
N57894.1 Clone IMAGE:247153 mixed 3' read A
BG742147.1 Clone IMAGE:4779150 skin 5' read P
N64121.1 Clone IMAGE:247153 mixed 5' read
BI049184.1 uterus
BI012248.1 lung
EL734569.1 mixed 5' read P
BG720244.1 Clone IMAGE:4824601 testis 5' read P
BG720394.1 Clone IMAGE:4824693 testis 5' read P
BI600414.1 Clone IMAGE:5288868 brain 5' read P
BI562561.1 Clone IMAGE:5298212 testis 5' read P
BI791887.1 Clone IMAGE:5086324 pancreas 5' read P
BI915264.1 Clone IMAGE:5248178 brain 5' read
BM474435.1 Clone IMAGE:5521700 uterus 5' read P
BM547170.1 Clone IMAGE:5730232 brain 5' read P
BM671558.1 Clone UI-E-CK1-afj-p-20-0-UI eye 3' read A
BM676727.1 Clone UI-E-EJ0-ahu-c-09-0-UI eye 3' read A
BM706611.1 Clone UI-E-CQ0-adr-a-10-0-UI brain 5' read
BM719862.1 Clone UI-E-EJ0-ahu-c-09-0-UI eye 5' read
BM728452.1 Clone UI-E-EJ0-aiu-o-01-0-UI eye 5' read
BM763603.1 Clone S13KMS5-15-H10 stomach 5' read
BM846390.1 Clone S13KMS5s1-21-C09 stomach 5' read
BM847066.1 Clone S13KMS5-46-A02 stomach 5' read
BM906681.1 Clone IMAGE:5724649 ovary 5' read
BM977694.1 Clone UI-CF-EN1-aef-m-12-0-UI lung 3' read A
BM992470.1 Clone IMAGE:5870418 bone 3' read A
BQ009653.1 Clone IMAGE:5835291 connective tissue 3' read A
BQ420265.1 Clone IMAGE:6019089 pancreas 5' read P
BQ706837.1 Clone IMAGE:6281529 spleen 5' read
BQ711409.1 Clone IMAGE:6278488 spleen 5' read
BQ777229.1 Clone IMAGE:6033000 pancreas 5' read P
BM149045.1 Clone TCAAP6154 bone marrow
BQ953663.1 Clone IMAGE:6197712 nerve 5' read P
BQ787932.1 Clone IMAGE:6033000 pancreas 3' read A
BU677109.1 Clone UI-CF-DU1-aaj-f-03-0-UI lung 3' read A
AA234132.1 Clone IMAGE:666732 mixed 5' read
AA251869.1 Clone IMAGE:684830 lymph node 5' read P
AA251870.1 Clone IMAGE:684830 lymph node 3' read A
CA414313.1 Clone UI-H-EZ0-baq-b-19-0-UI bone 3' read A
CA446787.1 Clone UI-H-ED1-axx-j-17-0-UI connective tissue 3' read A
CA455520.1 Clone IMAGE:6739654 mixed 5' read A
AA304256.1 vascular 5' read
AA321335.1 bone marrow 5' read
AA322370.1 brain 5' read
AA336817.1 uterus 5' read
AA337461.1 uterus 5' read
AA337543.1 uterus 5' read
AA337548.1 uterus 5' read
AA347629.1 heart 5' read
AA347983.1 heart 5' read
AA373016.1 lung 5' read
T86884.1 Clone IMAGE:115120 mixed 5' read
T86885.1 Clone IMAGE:115120 mixed 3' read A
AA483991.1 Clone IMAGE:909916 bone
AA584096.1 Clone IMAGE:1099747 adrenal gland 3' read
AA614626.1 Clone IMAGE:1130103 mammary gland 3' read A
T98989.1 Clone IMAGE:122719 mixed 5' read
AA634493.1 Clone IMAGE:743907 testis 3' read A
AA679552.1 Clone IMAGE:453586 mixed 3' read A
R05314.1 Clone IMAGE:125143 mixed 3' read A
R05374.1 Clone IMAGE:125143 mixed 5' read
AA748530.1 Clone IMAGE:1270908 lymph node 3' read A
AA774965.1 Clone IMAGE:970856 brain 3' read
AA779077.1 Clone IMAGE:452957 mixed 3' read A
AA812856.1 Clone 1391990 testis 3' read A
AA814406.1 Clone IMAGE:1287562 lymph node 3' read A
AA858159.1 Clone IMAGE:1435352 intestine 3' read A
AA837161.1 Clone IMAGE:1367436 lymph node A
AA935930.1 Clone IMAGE:1556867 lung 3' read
AA939249.1 Clone IMAGE:1585707 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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