R = Retrieve links to Related sequences (neighbors).
Use the 
icon (if present) to retrieve links to the Sequence Retrieval System (SRS).
Use the 
icon (if present) to retrieve links to the Ligand Enzyme and Chemical Compound Database .
Use the 
icon (if present) to retrieve links to the Protein Data Bank database.
>gi|3702328|gb|AAC62885.1| (AC005397) putative fatty acid desaturase/cytochrome
b5 fusion protein [Arabidopsis thaliana]
Length = 449
Frame 2 hits (HSPs): _______________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 449
0 150 300
Plus Strand HSPs:
Score = 533 (187.6 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
Identities = 93/126 (73%), Positives = 105/126 (83%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
D L+RFLISYQH+TFYPV+C R+NL++QT LLL S+R VPDRA NI GILVFW WFPLL
Sbjct: 241 DPLARFLISYQHWTFYPVMCVGRINLFIQTFLLLFSKRHVPDRALNIAGILVFWTWFPLL 300
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNW ER +FV FAV +IQH+QFCLNHF ADV GPPNGNDWFEKQT GTLDISC
Sbjct: 301 VSFLPNWQERFIFVFVSFAVTAIQHVQFCLNHFAADVYTGPPNGNDWFEKQTAGTLDISC 360
Query: 479 SSWMDW 496
S+MDW
Sbjct: 361 RSFMDW 366
Score = 171 (60.2 bits), Expect = 1.6e-66, Sum P(2) = 1.6e-66
Identities = 33/50 (66%), Positives = 39/50 (78%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSLD+DPDLQHIP+FA ST+FFNS+ S FYGRKL + RF+I H
Sbjct: 203 ACNSLDHDPDLQHIPIFAVSTKFFNSMTSRFYGRKLTFDPLARFLISYQH 252
>gi|2130017|pir||S68358 Delta8 sphingolipid desaturase (EC 1.14.99.-)
[similarity] - common sunflower >gi|1040729|emb|CAA60621.1|
(X87143) delta-8 sphingolipid desaturase [Helianthus annuus]
Length = 458
Frame 2 hits (HSPs): ______________
Frame 1 hits (HSPs): ______ __
__________________________________________________
Database sequence: | | | || 458
0 150 300 450
Plus Strand HSPs:
Score = 507 (178.5 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 84/126 (66%), Positives = 101/126 (80%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
D L+RF +SYQH+ +YP++C ARVNLYLQT+LLL S+RK+PDR NI+G L+FW WFPLL
Sbjct: 250 DPLARFFVSYQHYLYYPIMCVARVNLYLQTILLLISKRKIPDRGLNILGTLIFWTWFPLL 309
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNW ER FVL F V IQH+QF LNHF DV GPP G++WFEKQT GT+DI+C
Sbjct: 310 VSRLPNWPERVAFVLVSFCVTGIQHIQFTLNHFSGDVYVGPPKGDNWFEKQTRGTIDIAC 369
Query: 479 SSWMDW 496
SSWMDW
Sbjct: 370 SSWMDW 375
Score = 157 (55.3 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 30/52 (57%), Positives = 37/52 (71%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSHQL 147
ACNSLDYDPDLQH+P+ A S++ FNSI S FYGR+L + RF + H L
Sbjct: 212 ACNSLDYDPDLQHLPMLAVSSKLFNSITSVFYGRQLTFDPLARFFVSYQHYL 263
Score = 42 (14.8 bits), Expect = 1.9e-65, Sum P(3) = 1.9e-65
Identities = 6/9 (66%), Positives = 7/9 (77%), Frame = +1
Query: 493 LXLSSWMDW 519
+ SSWMDW
Sbjct: 367 IACSSWMDW 375
>gi|11358940|pir||T50555 delta-8 sphingolipid desaturase [imported] - rape
>gi|3819708|emb|CAA11857.1| (AJ224160) delta-8 sphingolipid
desaturase [Brassica napus]
Length = 449
Frame 2 hits (HSPs): _______________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 449
0 150 300
Plus Strand HSPs:
Score = 528 (185.9 bits), Expect = 5.4e-64, Sum P(2) = 5.4e-64
Identities = 92/126 (73%), Positives = 105/126 (83%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
D L+RFLISYQH++FYP++C R+NL++QTLLLL SRR VPDRA NI GILVFW WFPLL
Sbjct: 241 DPLARFLISYQHWSFYPIMCVGRINLFIQTLLLLFSRRYVPDRALNIAGILVFWTWFPLL 300
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNW ER +FV AV +IQH+QFCLNHF ADV GPPNGNDWFEKQT GTLDISC
Sbjct: 301 VSFLPNWQERIIFVFLSMAVTAIQHVQFCLNHFAADVYTGPPNGNDWFEKQTAGTLDISC 360
Query: 479 SSWMDW 496
S+MDW
Sbjct: 361 RSYMDW 366
Score = 152 (53.5 bits), Expect = 5.4e-64, Sum P(2) = 5.4e-64
Identities = 30/50 (60%), Positives = 36/50 (72%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
+CNSLD+DPDLQHIPV A S +FF S+ S FYGRKL + RF+I H
Sbjct: 203 SCNSLDHDPDLQHIPVLAVSNKFFKSMTSRFYGRKLTFDPLARFLISYQH 252
>gi|11357245|pir||T47950 delta-8 sphingolipid desaturase (EC 1.14.99.-)
[validated] - Arabidopsis thaliana >gi|3819710|emb|CAA11858.1|
(AJ224161) delta-8 sphingolipid desaturase [Arabidopsis thaliana]
>gi|6850849|emb|CAB71088.1| (AL132962) delta-8 sphingolipid
desaturase [Arabidopsis thaliana]
Length = 449
Frame 2 hits (HSPs): _______________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 449
0 150 300
Plus Strand HSPs:
Score = 503 (177.1 bits), Expect = 4.8e-63, Sum P(2) = 4.8e-63
Identities = 84/126 (66%), Positives = 101/126 (80%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
D ++RFL+SYQHFT+YPV+CF R+NL++QT LLL S+R+VPDRA N GILVFW WFPLL
Sbjct: 241 DPVARFLVSYQHFTYYPVMCFGRINLFIQTFLLLFSKREVPDRALNFAGILVFWTWFPLL 300
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNW ER FV F V ++QH+QF LNHF ADV GPP G+DWFEKQ GT+DISC
Sbjct: 301 VSCLPNWPERFFFVFTSFTVTALQHIQFTLNHFAADVYVGPPTGSDWFEKQAAGTIDISC 360
Query: 479 SSWMDW 496
S+MDW
Sbjct: 361 RSYMDW 366
Score = 168 (59.1 bits), Expect = 4.8e-63, Sum P(2) = 4.8e-63
Identities = 33/50 (66%), Positives = 38/50 (76%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSLDYDPDLQHIPVFA ST+FF+S+ S FY RKL V RF++ H
Sbjct: 203 ACNSLDYDPDLQHIPVFAVSTKFFSSLTSRFYDRKLTFDPVARFLVSYQH 252
>gi|4100569|gb|AAD00895.1| (AF001394) fatty acid desaturase/cytochrome b5
fusion protein [Arabidopsis thaliana]
Length = 446
Frame 2 hits (HSPs): _______________
Frame 1 hits (HSPs): _______
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 465 (163.7 bits), Expect = 4.8e-59, Sum P(2) = 4.8e-59
Identities = 81/126 (64%), Positives = 99/126 (78%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
D ++RFL+SYQHFT+YPV+CF R+NL++QT LLL S+R+VPDRA N GILVFW PLL
Sbjct: 241 DPVARFLVSYQHFTYYPVMCFGRINLFIQTFLLLFSKREVPDRALNFAGILVFWT--PLL 298
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNW ER FV F V ++QH+QF LNHF ADV GPP G+DWFEKQ GT+DISC
Sbjct: 299 VSCLPNWPERFFFVFTSFTVTALQHIQFTLNHFAADVYVGPPTGSDWFEKQAAGTIDISC 358
Query: 479 SSWMDW 496
S+MD+
Sbjct: 359 RSYMDF 364
Score = 168 (59.1 bits), Expect = 4.8e-59, Sum P(2) = 4.8e-59
Identities = 33/50 (66%), Positives = 38/50 (76%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSLDYDPDLQHIPVFA ST+FF+S+ S FY RKL V RF++ H
Sbjct: 203 ACNSLDYDPDLQHIPVFAVSTKFFSSLTSRFYDRKLTFDPVARFLVSYQH 252
>gi|2062403|gb|AAC49700.1| (U79010) delta 6 desaturase [Borago officinalis]
Length = 448
Frame 2 hits (HSPs): _______________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 448
0 150 300
Plus Strand HSPs:
Score = 454 (159.8 bits), Expect = 1.8e-53, Sum P(2) = 1.8e-53
Identities = 78/131 (59%), Positives = 101/131 (77%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
DSLSRF +SYQH+TFYP++C AR+N+Y+Q+L++L ++R V RA ++G LVF +W+PLL
Sbjct: 240 DSLSRFFVSYQHWTFYPIMCAARLNMYVQSLIMLLTKRNVSYRAHELLGCLVFSIWYPLL 299
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNWGER MFV+A +V +Q +QF LNHF + V G P GN+WFEKQT GTLDISC
Sbjct: 300 VSCLPNWGERIMFVIASLSVTGMQQVQFSLNHFSSSVYVGKPKGNNWFEKQTDGTLDISC 359
Query: 479 SSWMDWXSPHG 511
WMDW HG
Sbjct: 360 PPWMDWF--HG 368
Score = 126 (44.4 bits), Expect = 1.8e-53, Sum P(2) = 1.8e-53
Identities = 24/50 (48%), Positives = 33/50 (66%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSL+YDPDLQ+IP S++FF S+ S FY ++L + RF + H
Sbjct: 202 ACNSLEYDPDLQYIPFLVVSSKFFGSLTSHFYEKRLTFDSLSRFFVSYQH 251
>gi|4102021|gb|AAD01410.1| (AF007561) delta 6-desaturase [Borago officinalis]
Length = 448
Frame 2 hits (HSPs): _______________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | 448
0 150 300
Plus Strand HSPs:
Score = 452 (159.1 bits), Expect = 3.0e-53, Sum P(2) = 3.0e-53
Identities = 78/131 (59%), Positives = 101/131 (77%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
DSLSRF +SYQH+TFYP++C AR+N+Y+Q+L++L ++R V RA ++G LVF +W+PLL
Sbjct: 240 DSLSRFFVSYQHWTFYPIMCAARLNMYVQSLIMLLTKRNVSYRAQELLGCLVFSIWYPLL 299
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S LPNWGER MFV+A +V +Q +QF LNHF + V G P GN+WFEKQT GTLDISC
Sbjct: 300 VSCLPNWGERIMFVIASLSVTGMQQVQFSLNHFSSSVYVGKPKGNNWFEKQTDGTLDISC 359
Query: 479 SSWMDWXSPHG 511
WMDW HG
Sbjct: 360 PPWMDWF--HG 368
Score = 126 (44.4 bits), Expect = 3.0e-53, Sum P(2) = 3.0e-53
Identities = 24/50 (48%), Positives = 33/50 (66%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSL+YDPDLQ+IP S++FF S+ S FY ++L + RF + H
Sbjct: 202 ACNSLEYDPDLQYIPFLVVSSKFFGSLTSHFYEKRLTFDSLSRFFVSYQH 251
>gi|12002282|gb|AAG43277.1|AF133728_1 (AF133728) sphingolipid desaturase
[Borago officinalis]
Length = 446
Frame 2 hits (HSPs): _________________
Frame 1 hits (HSPs): ______ __
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 506 (178.1 bits), Expect = 4.3e-50, Sum P(2) = 4.3e-50
Identities = 91/149 (61%), Positives = 109/149 (73%), Frame = +2
Query: 50 SLPXRHGSSIQSNLVSMEGNWCXDSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSR 229
++P S+ S E + D LSRFL+SYQHFT Y V+ F R+NLY+QT LLL S
Sbjct: 218 AVPSSFFKSLTSRFYGRELTF--DGLSRFLVSYQHFTIYLVMIFGRINLYVQTFLLLFST 275
Query: 230 RKVPDRAFNIMGILVFWVWFPLLISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADV 409
RKVPDRA NI+GILV+W WFP L+S LPNW ER +FVL F+V ++QH+QF LNHF ADV
Sbjct: 276 RKVPDRALNIIGILVYWTWFPYLVSCLPNWNERVLFVLTCFSVTALQHIQFTLNHFAADV 335
Query: 410 XEGPPNGNDWFEKQTGGTLDISCSSWMDW 496
GPP G +WFEKQ GT+DISCSSWMDW
Sbjct: 336 YVGPPTGTNWFEKQAAGTIDISCSSWMDW 364
Score = 153 (53.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 29/50 (58%), Positives = 36/50 (72%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSLDYDPDLQH+PVFA + FF S+ S FYGR+L + RF++ H
Sbjct: 201 ACNSLDYDPDLQHLPVFAVPSSFFKSLTSRFYGRELTFDGLSRFLVSYQH 250
Score = 42 (14.8 bits), Expect = 4.3e-50, Sum P(2) = 4.3e-50
Identities = 6/9 (66%), Positives = 7/9 (77%), Frame = +1
Query: 493 LXLSSWMDW 519
+ SSWMDW
Sbjct: 356 ISCSSWMDW 364
>gi|4101626|gb|AAD01240.1| (AF005096) desaturase/cytochrome b5 protein [Ricinus
communis]
Length = 446
Frame 2 hits (HSPs): __________________
Frame 1 hits (HSPs): ______ ___
__________________________________________________
Database sequence: | | | | 446
0 150 300
Plus Strand HSPs:
Score = 480 (169.0 bits), Expect = 1.0e-44, P = 1.0e-44
Identities = 87/156 (55%), Positives = 112/156 (71%), Frame = +2
Query: 44 YLSLPXRHGSSIQSNLVSMEGNWCXDSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLX 223
+ ++ + SSI S + N+ D +RFL+SYQH TFYPV+CFAR+NL+ Q++ LL
Sbjct: 215 FFAVSSKFFSSITSYFYERKMNF--DCAARFLVSYQHLTFYPVMCFARINLFAQSISLLL 272
Query: 224 SRRKVPDRAFNIMGILVFWVWFPLLISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXA 403
S+R+V +R I+G+LVFW+W+P L+S LPNWGER MFV A F+V IQH+QFCLNHF +
Sbjct: 273 SKRRVANRGQEILGVLVFWIWYPFLVSCLPNWGERVMFVAASFSVTRIQHVQFCLNHFSS 332
Query: 404 DVXEGPPNGNDWFEKQTGGTLDISCSSWMDWXSPHG 511
V G NDWFE QT GTLDI+CSSWMDW HG
Sbjct: 333 SVYLGLLIANDWFENQTKGTLDITCSSWMDWF--HG 366
Score = 148 (52.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 28/50 (56%), Positives = 36/50 (72%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
ACNSLD+DPDLQH+P FA S++FF+SI S FY RK+ RF++ H
Sbjct: 200 ACNSLDFDPDLQHMPFFAVSSKFFSSITSYFYERKMNFDCAARFLVSYQH 249
Score = 45 (15.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 10/24 (41%), Positives = 12/24 (50%), Frame = +1
Query: 448 ANWWHIGHFLLLMDGLXLSSWMDW 519
AN W +D + SSWMDW
Sbjct: 341 ANDWFENQTKGTLD-ITCSSWMDW 363
>gi|4104056|gb|AAD10250.1| (AF031194) S276 [Triticum aestivum]
Length = 469
Frame 2 hits (HSPs): ________________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 469
0 150 300 450
Plus Strand HSPs:
Score = 465 (163.7 bits), Expect = 4.0e-43, P = 4.0e-43
Identities = 80/140 (57%), Positives = 101/140 (72%), Frame = +2
Query: 92 VSMEGNWCXDSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGIL 271
V E D++S+F +SYQH+TFYPV+ FAR+NL +Q+++ L +++KV R I G+
Sbjct: 251 VCYERTLAFDAISKFFVSYQHWTFYPVMGFARINLLVQSIVFLITQKKVRQRWLEIAGVA 310
Query: 272 VFWVWFPLLISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQ 451
FWVW+PLL+S LPNW ER FVLA F + IQH+QFCLNHF + V GPP GNDWFE+Q
Sbjct: 311 AFWVWYPLLVSCLPNWWERVAFVLASFVITGIQHVQFCLNHFSSAVYVGPPKGNDWFERQ 370
Query: 452 TGGTLDISCSSWMDWXSPHG 511
T GTLDI CS WMDW HG
Sbjct: 371 TAGTLDIKCSPWMDWF--HG 388
Score = 130 (45.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/50 (48%), Positives = 34/50 (68%), Frame = +1
Query: 4 ACNSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSH 141
+CNSLD+DPDLQH+P+FA ST+ FN++ S Y R L + +F + H
Sbjct: 222 SCNSLDHDPDLQHLPLFAVSTKLFNNLWSVCYERTLAFDAISKFFVSYQH 271
>gi|11527281|gb|AAG36959.1|AF290983_1 (AF290983) delta-6 desaturase [Mucor
rouxii] >gi|11527283|gb|AAG36960.1|AF296076_1 (AF296076) delta-6
desaturase [Mucor rouxii]
Length = 523
Frame 2 hits (HSPs): ______________
Frame 1 hits (HSPs): ______
__________________________________________________
Database sequence: | | | | | 523
0 150 300 450
Plus Strand HSPs:
Score = 227 (79.9 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 42/131 (32%), Positives = 70/131 (53%), Frame = +2
Query: 119 DSLSRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKVPDRAFNIMGILVFWVWFPLL 298
D+ SRF + +QH+ +Y +L F R NL+ + L + + V R ++GI F+VWF L
Sbjct: 314 DAASRFFVRHQHYLYYLILSFGRFNLHRLSFAYLLTCKNVRTRTLELVGITFFFVWFGSL 373
Query: 299 ISSLPNWGERXMFVLAXFAVCSIQHLQFCLNHFXADVXEGPPNGNDWFEKQTGGTLDISC 478
+S+LP W R +++ + + H+Q L+HF + P+ + K T+D+ C
Sbjct: 374 LSTLPTWNIRIAYIMVSYMLTFPLHVQITLSHFGMSTEDRGPD-EPFPAKMLRTTMDVDC 432
Query: 479 SSWMDWXSPHG 511
W+DW HG
Sbjct: 433 PEWLDWF--HG 441
Score = 109 (38.4 bits), Expect = 0.0043, P = 0.0042
Identities = 23/57 (40%), Positives = 36/57 (63%), Frame = +1
Query: 10 NSLDYDPDLQHIPVFAXSTRFFNSIKSCFYGRKL----VXRFIIKVSHQLPALHILPSF 174
N ++DPD+QH+P A +T+FFN+I S +Y R L RF ++ H L +++ SF
Sbjct: 278 NHPEHDPDIQHVPFMAITTKFFNNIYSTYYKRVLPFDAASRFFVRHQHYL--YYLILSF 334
>gi|12007244|gb|AAG45093.1|AF307941_1 (AF307941) delta 6-fatty acid desaturase
[Mortierella alpina] >gi|12007246|gb|AAG45094.1|AF307942_1
(AF307942) delta 6-fatty acid desaturase [Mortierella alpina]
Length = 357
Frame 2 hits (HSPs): ___________________
__________________________________________________
Database sequence: | | | | 357
0 150 300
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.12, P = 0.11
Identities = 32/134 (23%), Positives = 61/134 (45%), Frame = +2
Query: 128 SRFLISYQHFTFYPVLCFARVNLYLQTLLLLX--------SRRKVPDRAFNIMGILVFWV 283
SRF++ Q + ++P+L FAR++ LQ++L + S +VP + + + W
Sbjct: 209 SRFMVLNQTWFYFPILSFARLSWCLQSILFVLPNGQAHKPSGARVPISLVEQLSLAMHWT 268
Query: 284 WF-PLLISSLPNWGERXMFVLAXFAVC-SIQHLQFCLNHFXADVXEGPPNGN-DWFEKQT 454
W+ + + + ++ L AVC ++ + F LNH V + D+F KQ
Sbjct: 269 WYLATMFLFIKDPVNMMVYFLVSQAVCGNLLAIVFSLNHNGMPVISKEEAVDMDFFTKQI 328
Query: 455 GGTLDISCSSWMDW 496
D+ + +W
Sbjct: 329 ITGRDVHPGLFANW 342
>gi|6448796|gb|AAF08685.1|AF110510_1 (AF110510) delta-6 fatty acid desaturase
[Mortierella alpina]
Length = 457
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | || 457
0 150 300 450
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.17, P = 0.15
Identities = 32/134 (23%), Positives = 61/134 (45%), Frame = +2
Query: 128 SRFLISYQHFTFYPVLCFARVNLYLQTLLLLX--------SRRKVPDRAFNIMGILVFWV 283
SRF++ Q + ++P+L FAR++ LQ++L + S +VP + + + W
Sbjct: 254 SRFMVLNQTWFYFPILSFARLSWCLQSILFVLPNGQAHKPSGARVPISLVEQLSLAMHWT 313
Query: 284 WF-PLLISSLPNWGERXMFVLAXFAVC-SIQHLQFCLNHFXADVXEGPPNGN-DWFEKQT 454
W+ + + + ++ L AVC ++ + F LNH V + D+F KQ
Sbjct: 314 WYLATMFLFIKDPVNMLVYFLVSQAVCGNLLAIVFSLNHNGMPVISKEEAVDMDFFTKQI 373
Query: 455 GGTLDISCSSWMDW 496
D+ + +W
Sbjct: 374 ITGRDVHPGLFANW 387
>gi|12007242|gb|AAG45092.1|AF307940_1 (AF307940) delta 6-fatty acid desaturase
[Mortierella alpina]
Length = 457
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | || 457
0 150 300 450
Plus Strand HSPs:
Score = 96 (33.8 bits), Expect = 0.17, P = 0.15
Identities = 32/134 (23%), Positives = 61/134 (45%), Frame = +2
Query: 128 SRFLISYQHFTFYPVLCFARVNLYLQTLLLLX--------SRRKVPDRAFNIMGILVFWV 283
SRF++ Q + ++P+L FAR++ LQ++L + S +VP + + + W
Sbjct: 254 SRFMVLNQTWFYFPILSFARLSWCLQSILFVLPNGQAHKPSGARVPISLVEQLSLAMHWT 313
Query: 284 WF-PLLISSLPNWGERXMFVLAXFAVC-SIQHLQFCLNHFXADVXEGPPNGN-DWFEKQT 454
W+ + + + ++ L AVC ++ + F LNH V + D+F KQ
Sbjct: 314 WYLATMFLFIKDPVNMMVYFLVSQAVCGNLLAIVFSLNHNGMPVISKEEAVDMDFFTKQI 373
Query: 455 GGTLDISCSSWMDW 496
D+ + +W
Sbjct: 374 ITGRDVHPGLFANW 387
>gi|6070340|dbj|BAA85588.1| (AB020032) delta-6 fatty acid desaturase
[Mortierella alpina]
Length = 457
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | || 457
0 150 300 450
Plus Strand HSPs:
Score = 94 (33.1 bits), Expect = 0.30, P = 0.26
Identities = 31/134 (23%), Positives = 61/134 (45%), Frame = +2
Query: 128 SRFLISYQHFTFYPVLCFARVNLYLQTLLLLX--------SRRKVPDRAFNIMGILVFWV 283
SRF++ Q + ++P+L FAR++ LQ+++ + S +VP + + + W
Sbjct: 254 SRFMVLNQTWFYFPILSFARLSWCLQSIMFVLPNGQAHKPSGARVPISLVEQLSLAMHWT 313
Query: 284 WF-PLLISSLPNWGERXMFVLAXFAVC-SIQHLQFCLNHFXADVXEGPPNGN-DWFEKQT 454
W+ + + + ++ L AVC ++ + F LNH V + D+F KQ
Sbjct: 314 WYLATMFLFIKDPVNMIVYFLVSQAVCGNLLAIVFSLNHNGMPVISKEEAVDMDFFTKQI 373
Query: 455 GGTLDISCSSWMDW 496
D+ + +W
Sbjct: 374 ITGRDVHPGLFANW 387
>gi|11559824|gb|AAG38104.1|AF306634_1 (AF306634) delta6-fatty acid desaturase
[Mortierella isabellina]
Length = 457
Frame 2 hits (HSPs): ________________
__________________________________________________
Database sequence: | | | || 457
0 150 300 450
Plus Strand HSPs:
Score = 92 (32.4 bits), Expect = 0.53, P = 0.41
Identities = 33/134 (24%), Positives = 63/134 (47%), Frame = +2
Query: 128 SRFLISYQHFTFYPVLCFARVNLYLQTLLLLXSRRKV--PDRA-FNI-----MGILVFWV 283
SRF++ Q + ++P+L FAR++ LQ++LL+ + P A +I + + + W
Sbjct: 254 SRFMVLNQTWFYFPILSFARLSWCLQSILLVLPNGQAHKPSGARVSISLVEQLSLAMHWT 313
Query: 284 WF-PLLISSLPNWGERXMFVLAXFAVC-SIQHLQFCLNHFXADVXEGPPNGN-DWFEKQT 454
W+ + + + ++ L AVC ++ + F LNH V + D+F KQ
Sbjct: 314 WYLATMFLFIKDPVNMMVYFLVSQAVCGNLLAIVFSLNHNGMPVISKEEAVDMDFFTKQI 373
Query: 455 GGTLDISCSSWMDW 496
D+ + +W
Sbjct: 374 ITGRDVHPGLFANW 387
Parameters:
filter=none
matrix=BLOSUM62
V=50
B=50
E=10
gi
H=1
sort_by_pvalue
echofilter
ctxfactor=5.97
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
Std. 0 BLOSUM62 0.318 0.135 0.401
+3 0 BLOSUM62 0.318 0.135 0.401 0.350 0.150 0.567
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+2 0 BLOSUM62 0.318 0.135 0.401 0.328 0.141 0.483
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
+1 0 BLOSUM62 0.318 0.135 0.401 0.346 0.156 0.584
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-1 0 BLOSUM62 0.318 0.135 0.401 0.348 0.151 0.567
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-2 0 BLOSUM62 0.318 0.135 0.401 0.334 0.144 0.480
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
-3 0 BLOSUM62 0.318 0.135 0.401 0.343 0.148 0.494
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+3 0 173 165 10. 75 3 12 22 0.10 34
30 0.10 37
+2 0 174 165 10. 75 3 12 22 0.10 34
30 0.10 37
+1 0 174 166 10. 75 3 12 22 0.10 34
30 0.10 37
-1 0 174 165 10. 75 3 12 22 0.10 34
30 0.10 37
-2 0 174 164 10. 75 3 12 22 0.10 34
30 0.10 37
-3 0 173 166 10. 75 3 12 22 0.10 34
30 0.10 37
Statistics:
Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr
Title: nr
Release date: unknown
Posted date: 4:06 PM CST Feb 28, 2001
Format: BLAST
# of letters in database: 197,782,623
# of sequences in database: 625,274
# of database sequences satisfying E: 16
No. of states in DFA: 589 (58 KB)
Total size of DFA: 221 KB (256 KB)
Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00
No. of threads or processors used: 6
Search cpu time: 173.81u 0.96s 174.77t Elapsed: 00:00:31
Total cpu time: 173.84u 0.99s 174.83t Elapsed: 00:00:31
Start: Mon Feb 4 10:36:57 2002 End: Mon Feb 4 10:37:28 2002
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000