Shigella dysenteriae Sd197

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140482-140581 (1-100) 140582-140681 (101-200) 140682-140781 (201-300) 140782-140881 (301-400) 140882-140981 (401-500)
140982-141081 (501-600) 141082-141181 (601-700) 141182-141281 (701-800) [141282-141381 (801-900)] 141382-141481 (901-1000)
141482-141581 (1001-1100) 141582-141681 (1101-1200) 141682-141781 (1201-1300) 141782-141881 (1301-1400) 141882-141981 (1401-1500)
141982-142081 (1501-1600) 142082-142181 (1601-1700) 142182-142281 (1701-1800) 142282-142381 (1801-1900) 142382-142481 (1901-2000)
142482-142581 (2001-2100) 142582-142681 (2101-2200) 142682-142781 (2201-2300) 142782-142881 (2301-2400) 142882-142981 (2401-2500)
142982-143081 (2501-2600) 143082-143181 (2601-2700) 143182-143281 (2701-2800) 143282-143381 (2801-2900) 143382-143481 (2901-3000)
143482-143581 (3001-3100) 143582-143681 (3101-3200) 143682-143781 (3201-3300) 143782-143881 (3301-3400) 143882-143981 (3401-3500)
143982-144081 (3501-3600) 144082-144181 (3601-3700) 144182-144281 (3701-3800) 144282-144381 (3801-3900) 144382-144481 (3901-4000)
144482-144581 (4001-4100) 144582-144681 (4101-4200) 144682-144758 (4201-4277)


Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141282 hypothetical SDY_0860 conserved hypothetical protein
orf
genbank 81240328 ABB61038.1 75 809772 809999
141283 ompC hypothetical SDY_0861 outer membrane protein 1b
Ib;c; Code: M; COG: COG3203
genbank 81240329 ABB61039.1 375 810258 811385
141284 yojL hypothetical SDY_0862 conserved hypothetical protein
Code: H; COG: COG1477; orf
genbank 81240330 ABB61040.1 351 811497 812552
141285 ada hypothetical SDY_0863 O6-methylguanine-DNA methyltransferase
transcription activator/repressor; Code: F; COG: COG2169
genbank 81240331 ABB61041.1 354 812626 813690
141286 alkB hypothetical SDY_0864 DNA repair system specific for alkylated DNA
Code: L; COG: COG3145
genbank 81240332 ABB61042.1 216 813690 814340
141287 yojI hypothetical SDY_0865 putative ATP-binding component of a transport system
Code: QP; COG: COG4615
genbank 81240333 ABB61043.1 547 814416 816059
141288 yojH hypothetical SDY_0866 conserved hypothetical protein
Code: R; COG: COG0579; orf
genbank 81240334 ABB61044.1 548 816277 817923
141289 hypothetical SDY_0867 IS600 ORF2
Code: L; COG: COG2801
genbank 81240335 ABB61045.1 258 818619 819395
141290 hypothetical SDY_0868 IS600 ORF1
Code: L; COG: COG2963
genbank 81240336 ABB61046.1 100 819536 819838
141291 napF hypothetical SDY_0870 ferredoxin-type protein
electron transfer; Code: C; COG: COG1145
genbank 81240337 ABB61047.1 164 820463 820957
141292 napD hypothetical SDY_0871 conserved hypothetical protein
Code: P; COG: COG3062; orf
genbank 81240338 ABB61048.1 87 820947 821210
141293 napA hypothetical SDY_0872 probable nitrate reductase 3
Code: C; COG: COG0243
genbank 81240339 ABB61049.1 828 821207 823693
141294 napG hypothetical SDY_0873 ferredoxin-type protein
electron transfer; Code: C; COG: COG1145
genbank 81240340 ABB61050.1 231 823700 824395
141295 napH hypothetical SDY_0874 ferredoxin-type protein
electron transfer; Code: C; COG: COG0348
genbank 81240341 ABB61051.1 287 824382 825245
141296 napB hypothetical SDY_0875 cytochrome c-type protein
Code: C; COG: COG3043
genbank 81240342 ABB61052.1 156 825221 825691
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141297 napC hypothetical SDY_0876 cytochrome c-type protein
Code: C; COG: COG3005
genbank 81240343 ABB61053.1 200 825701 826303
141298 ccmA hypothetical SDY_0877 ATP binding protein of heme exporter A
Code: O; COG: COG4133
genbank 81240344 ABB61054.1 205 826322 826939
141299 ccmB hypothetical SDY_0878 heme exporter protein B
cytochrome c-type biogenesis protein; Code: O; COG: COG2386
genbank 81240345 ABB61055.1 220 826936 827598
141300 ccmC hypothetical SDY_0879 heme exporter protein C
Code: O; COG: COG0755
genbank 81240346 ABB61056.1 245 827640 828377
141301 ccmD hypothetical SDY_0880 heme exporter protein C
Code: U; COG: COG3114
genbank 81240347 ABB61057.1 69 828374 828583
141302 ccmE hypothetical SDY_0881 cytochrome c biogenesis
possible subunit of a heme lyase; Code: O; COG: COG2332
genbank 81240348 ABB61058.1 159 828580 829059
141303 ccmF hypothetical SDY_0882 cytochrome c-type biogenesis protein
Code: O; COG: COG1138
genbank 81240349 ABB61059.1 647 829056 830999
141304 dsbE hypothetical SDY_0883 disulfide oxidoreductase
possibly involved in biogenesis of cytochrome c; Code: OC; COG: COG0526
genbank 81240350 ABB61060.1 185 830996 831553
141305 ccmH hypothetical SDY_0884 possible subunit of heme lyase
Code: O; COG: COG4235
genbank 81240351 ABB61061.1 350 831550 832602
141306 narP hypothetical SDY_0885 nitrate/nitrite response regulator
sensor NarQ; Code: TK; COG: COG2197
genbank 81240352 ABB61062.1 215 832813 833460
141307 hypothetical SDY_0886 iso-IS1 ORF2
Code: L; COG: COG1662
genbank 81240353 ABB61063.1 131 834089 834484
141308 insB hypothetical SDY_0887 IS1 ORF2 genbank 81240354 ABB61064.1 67 835141 835344
141309 insA hypothetical SDY_0888 IS1 ORF1
Code: L; COG: COG3677
genbank 81240355 ABB61065.1 91 835389 835664
141310 yejO hypothetical SDY_0889 putative ATP-binding component of a transport system
Code: MU; COG: COG3468
genbank 81240356 ABB61066.1 684 835867 837921
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141311 yejM hypothetical SDY_0891 putative sulfatase
Code: R; COG: COG3083
genbank 81240357 ABB61067.1 586 838174 839934
141312 yejL hypothetical SDY_0892 conserved hypothetical protein
Code: S; COG: COG3082; orf
genbank 81240358 ABB61068.1 75 839954 840181
141313 yejK hypothetical SDY_0893 conserved hypothetical protein
Code: R; COG: COG3081; orf
genbank 81240359 ABB61069.1 335 840363 841370
141314 rplY hypothetical SDY_0894 50S ribosomal subunit protein L25
Code: J; COG: COG1825
genbank 81240360 ABB61070.1 94 841509 841793
141315 yejH hypothetical SDY_0895 putative ATP-dependent helicase
Code: KL; COG: COG1061
genbank 81240361 ABB61071.1 586 841918 843678
141316 rsuA hypothetical SDY_0896 16S pseudouridylate 516 synthase
Code: J; COG: COG1187
genbank 81240362 ABB61072.1 231 843828 844523
141317 bcr hypothetical SDY_0897 bicyclomycin resistance protein
transmembrane protein; Code: GEPR; COG: COG0477
genbank 81240363 ABB61073.1 396 844551 845741
141318 yejG hypothetical SDY_0898 conserved hypothetical protein
orf
genbank 81240364 ABB61074.1 114 846074 846418
141319 yejF hypothetical SDY_0899 putative ATP-binding component of a transport system
Code: R; COG: COG4172
genbank 81240365 ABB61075.1 529 846422 848011
141320 yejE hypothetical SDY_0900 putative transport system permease protein
Code: R; COG: COG4239
genbank 81240366 ABB61076.1 341 848013 849038
141321 yejB hypothetical SDY_0901 putative transport system permease protein
Code: R; COG: COG4174
genbank 81240367 ABB61077.1 364 849038 850132
141322 yejA hypothetical SDY_0902 conserved hypothetical protein
Code: E; COG: COG4166; orf
genbank 81240368 ABB61078.1 606 850133 851953
141323 rtn hypothetical SDY_0903 conserved hypothetical protein
Code: T; COG: COG2200; orf
genbank 81240369 ABB61079.1 518 852029 853585
141324 spr hypothetical SDY_0904 putative lipoprotein
Code: M; COG: COG0791
genbank 81240370 ABB61080.1 188 853766 854332
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141325 hypothetical SDY_0905 conserved hypothetical protein
Code: I; COG: COG0671; orf
genbank 81240371 ABB61081.1 249 854744 855493
141326 yeiR hypothetical SDY_0906 conserved hypothetical protein
Code: R; COG: COG0523; orf
genbank 81240372 ABB61082.1 328 855496 856482
141327 yeiQ hypothetical SDY_0907 putative oxidoreductase
Code: G; COG: COG0246
genbank 81240373 ABB61083.1 469 856657 858066
141328 yeiP hypothetical SDY_0908 putative elongation factor
Code: J; COG: COG0231
genbank 81240374 ABB61084.1 275 858289 859116
141329 yeiO hypothetical SDY_0909 putative transport
Code: GEPR; COG: COG0477
genbank 81240375 ABB61085.1 393 859267 860448
141330 hypothetical SDY_0910 iso-IS1 ORF2 genbank 81240376 ABB61086.1 71 860588 860803
141331 hypothetical SDY_0911 hypothetical protein
orf
genbank 81240377 ABB61087.1 108 861177 861503
141332 hypothetical SDY_0912 hypothetical protein
orf
genbank 81240378 ABB61088.1 277 861552 862385
141333 hypothetical SDY_0913 iso-IS1 ORF2 genbank 81240379 ABB61089.1 71 862959 863174
141334 hypothetical SDY_0914 FimH-like protein
similar to Salmonella FimH; Code: NU; COG: COG3539
genbank 81240380 ABB61090.1 355 863152 864219
141335 hypothetical SDY_0915 putative fimbrial-like protein
Code: NU; COG: COG3539
genbank 81240381 ABB61091.1 169 864263 864772
141336 hypothetical SDY_0916 putative fimbrial-like protein
Code: NU; COG: COG3539
genbank 81240382 ABB61092.1 187 864732 865295
141337 ycbF hypothetical SDY_0917 putative chaperone
Code: NU; COG: COG3121
genbank 81240383 ABB61093.1 245 865261 865998
141338 pyrD hypothetical SDY_0918 dihydro-orotate dehydrogenase
Code: F; COG: COG0167
genbank 81240384 ABB61094.1 336 866109 867119
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141339 ycbW hypothetical SDY_0919 conserved hypothetical protein
orf
genbank 81240385 ABB61095.1 192 867257 867835
141340 hypothetical SDY_0920 conserved hypothetical protein
Code: R; COG: COG3217; orf
genbank 81240386 ABB61096.1 369 867832 868941
141341 ycbY hypothetical SDY_0921 putative oxidoreductase
Code: L; COG: COG0116
genbank 81240387 ABB61097.1 702 869185 871293
141342 uup hypothetical SDY_0922 putative ATP-binding component of a transport system
Code: R; COG: COG0488
genbank 81240388 ABB61098.1 635 871305 873212
141343 pqiA hypothetical SDY_0923 paraquat-inducible protein A
Code: S; COG: COG2995
genbank 81240389 ABB61099.1 417 873342 874595
141344 pqiB hypothetical SDY_0924 paraquat-inducible protein B
Code: R; COG: COG3008
genbank 81240390 ABB61100.1 546 874600 876240
141345 ymbA hypothetical SDY_0925 conserved hypothetical protein
Code: S; COG: COG3009; orf
genbank 81240391 ABB61101.1 182 876252 876800
141346 rmf hypothetical SDY_0926 ribosome modulation factor
Code: J; COG: COG3130
genbank 81240392 ABB61102.1 55 877056 877223
141347 fabA hypothetical SDY_0927 beta-hydroxydecanoyl thioester dehydrase
trans-2-decenoyl-ACP isomerase; Code: I; COG: COG0764
genbank 81240393 ABB61103.1 172 877293 877811
141348 ycbG hypothetical SDY_0929 putative dehydrogenase
Code: S; COG: COG3120
genbank 81240394 ABB61104.1 150 879851 880303
141349 ompA hypothetical SDY_0930 outer membrane protein 3a
II*;G;d; Code: M; COG: COG2885
genbank 81240395 ABB61105.1 350 880379 881431
141350 hypothetical SDY_0931 IS600 ORF1
Code: L; COG: COG2963
genbank 81240396 ABB61106.1 100 882087 882389
141351 hypothetical SDY_0932 IS600 ORF2
Code: L; COG: COG2801
genbank 81240397 ABB61107.1 261 882530 883315
141352 hypothetical SDY_0934 conserved hypothetical protein
Code: K; COG: COG3070; orf
genbank 81240398 ABB61108.1 209 883786 884415
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141353 hypothetical SDY_0935 conserved hypothetical protein
Code: S; COG: COG1289; orf
genbank 81240399 ABB61109.1 720 884378 886540
141354 yccF hypothetical SDY_0936 conserved hypothetical protein
Code: S; COG: COG3304; orf
genbank 81240400 ABB61110.1 148 886550 886996
141355 helD hypothetical SDY_0937 DNA helicase IV
Code: L; COG: COG0210
genbank 81240401 ABB61111.1 684 887119 889173
141356 mgsA hypothetical SDY_0938 methylglyoxal synthase
Code: G; COG: COG1803
genbank 81240402 ABB61112.1 155 889205 889672
141357 hypothetical SDY_0939 conserved hypothetical protein
Code: S; COG: COG3110; orf
genbank 81240403 ABB61113.1 220 889759 890421
141358 hypothetical SDY_0940 conserved hypothetical protein
Code: R; COG: COG1832; orf
genbank 81240404 ABB61114.1 164 890513 891007
141359 yccV hypothetical SDY_0941 conserved hypothetical protein
Code: S; COG: COG3785; orf
genbank 81240405 ABB61115.1 122 891052 891420
141360 yccW hypothetical SDY_0942 conserved hypothetical protein
Code: R; COG: COG1092; orf
genbank 81240406 ABB61116.1 398 891427 892623
141361 hypothetical SDY_0943 conserved hypothetical protein
Code: C; COG: COG1254; orf
genbank 81240407 ABB61117.1 92 892718 892996
141362 yccK hypothetical SDY_0944 putative sulfite reductase
Code: P; COG: COG2920
genbank 81240408 ABB61118.1 128 892993 893379
141363 yccA hypothetical SDY_0945 putative carrier/transport protein
Code: R; COG: COG0670
genbank 81240409 ABB61119.1 219 893413 894072
141364 hyaA hypothetical SDY_0947 hydrogenase-1 small subunit
Code: C; COG: COG1740
genbank 81240410 ABB61120.1 372 894797 895915
141365 hyaB hypothetical SDY_0948 hydrogenase-1 large subunit
Code: C; COG: COG0374
genbank 81240411 ABB61121.1 568 895912 897618
141366 hyaC hypothetical SDY_0949 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit
Code: C; COG: COG1969
genbank 81240412 ABB61122.1 235 897710 898417
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141367 hyaD hypothetical SDY_0950 processor of HyaA and HyaB proteins
Code: C; COG: COG0680
genbank 81240413 ABB61123.1 195 898414 899001
141368 hyaE hypothetical SDY_0951 processor of HyaA and HyaB proteins genbank 81240414 ABB61124.1 132 898998 899396
141369 hyaF pseudogene SDY_0952
original product: nickel incorporation into hydrogenase-1 proteins
genbank 275 899393 900223
141370 appC hypothetical SDY_0953 probable third cytochrome oxidase, subunit I
Code: C; COG: COG1271
genbank 81240415 ABB61125.1 514 900384 901928
141371 appB hypothetical SDY_0954 probable third cytochrome oxidase, subunit II
Code: C; COG: COG1294
genbank 81240416 ABB61126.1 378 901940 903076
141372 yccB hypothetical SDY_0955 Uncharacterized protein
Code: S; COG: COG4890
genbank 81240417 ABB61127.1 30 903089 903181
141373 appA hypothetical SDY_0956 phosphoanhydride phosphorylase
pH 2.5 acid phosphatase; periplasmic
genbank 81240418 ABB61128.1 434 903261 904565
141374 yccC hypothetical SDY_0957 conserved hypothetical protein
Code: M; COG: COG3206; orf
genbank 81240419 ABB61129.1 726 904685 906865
141375 yccY hypothetical SDY_0958 putative phosphatase
Code: T; COG: COG0394
genbank 81240420 ABB61130.1 152 906885 907343
141376 yccZ hypothetical SDY_0959 putative function in exopolysaccharide production
Code: M; COG: COG1596
genbank 81240421 ABB61131.1 379 907319 908458
141377 ymcA hypothetical SDY_0960 conserved hypothetical protein
orf
genbank 81240422 ABB61132.1 698 908504 910600
141378 ymcB hypothetical SDY_0961 conserved hypothetical protein
orf
genbank 81240423 ABB61133.1 248 910600 911346
141379 ymcC hypothetical SDY_0962 putative regulator genbank 81240424 ABB61134.1 214 911343 911987
141380 ymcD hypothetical SDY_0963 conserved hypothetical protein
orf
genbank 81240425 ABB61135.1 107 912094 912417
Single chain protein id Protein name Protein type Locus tag Description / User comment Database name Database id Genbank accession Length Start on contig / cds translation End on contig / cds translation
141381 cspH hypothetical SDY_0964 cold shock-like protein
Code: K; COG: COG1278
genbank 81240426 ABB61136.1 70 912841 913053


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