proteins
1 BUDs| 21 proteins |
C | COG3794 | Plastocyanin | Help | |
|---|---|---|---|---|---|
| 3 from | query genome Methanosarcina acetivorans str.C2A (Methanosarcinales | Methanomicrobia) | ||||
| 1 BUDs | (MA1357 MA1358 MA1685 ) | ||||
147 letters (r) 0
0 679 = ||| 1 MA1357 (147) = 4
-47
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MA1357
(147 letters)
Database: myva
192,987 sequences; 59,019,183 total letters
Score E
Sequences producing significant alignments: (bits) Value
MA1357 266 2e-71
MA1685 105 3e-23
MA1358 101 4e-22
mlr4661 62 5e-10
mll8137 51 8e-07
SMb20594 50 1e-06
MA0800 48 9e-06
sll0199 45 4e-05
VNG0249G 45 5e-05
MA1454 44 9e-05
BH2028 39 0.003
VNG0795G 35 0.046
MA1452 34 0.12
MA1356 33 0.17
yghJ 33 0.23
CC1990 31 0.70
YPO1855 31 0.84
VNG0586C 31 0.93
AGl2859 31 1.1
DRA0192 31 1.2
VNG0786G 30 1.3
RSc3253 30 1.5
CAC0486 30 1.6
BMEII0965 30 1.6
YPCD1.84c 30 2.3
RSc2576 30 2.5
MA2208 29 2.8
mlr6404 29 3.1
PA2807 29 3.2
ECs1264 29 4.2
ZycdO 29 4.2
ycdO 29 4.2
VNG1188G 29 4.2
MA2148 29 4.2
SMc04047 28 4.7
MA2280 28 5.0
CC2686 28 5.1
SP0462 28 5.2
PAB1881 28 5.6
PSLT108 28 5.6
alr0436 28 5.6
MA1237 28 5.8
ECU09g1800 28 8.3
mlr5174 28 9.3
# >MA1357
# Length = 147
#
# Score = 266 bits (679), Expect = 2e-71
# Identities = 147/147 (100%), Positives = 147/147 (100%)
#
# Query: 1 MGETMRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSE 60
# MGETMRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSE
# Sbjct: 1 MGETMRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSE 60
#
# Query: 61 TGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFEF 120
# TGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFEF
# Sbjct: 61 TGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFEF 120
#
# Query: 121 LFTDPGVYDYSCSIHPSMKGTVIVENN 147
# LFTDPGVYDYSCSIHPSMKGTVIVENN
# Sbjct: 121 LFTDPGVYDYSCSIHPSMKGTVIVENN 147
#
#
# >MA1685
# Length = 156
#
# Score = 105 bits (263), Expect = 3e-23
# Identities = 59/148 (39%), Positives = 86/148 (57%), Gaps = 10/148 (6%)
#
# Query: 5 MRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPV--------EEPAMVPDSN 56
# ++KE+II V+ + GC N G + P+TP E + EE VP++
# Sbjct: 9 VKKEIIIFLVILGMLFVAGCAENGGPEDPAPSTPVEETVEEMDNGEVSGGEETVTVPEAE 68
#
# Query: 57 ATSETGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGD 116
# +ETG +I++V I+D+ + P+S+TV G TVRWTN D+V H V G ES L+ G+
# Sbjct: 69 -QNETGAS-EIIDVEIRDYKYIPDSLTVDVGQTVRWTNYDTVLHDVVGSGIESEYLKQGE 126
#
# Query: 117 SFEFLFTDPGVYDYSCSIHPSMKGTVIV 144
# +F + F G YDY C++HPSM+G VIV
# Sbjct: 127 TFTYTFEQEGTYDYICTLHPSMEGKVIV 154
#
#
# >MA1358
# Length = 255
#
# Score = 101 bits (252), Expect = 4e-22
# Identities = 62/128 (48%), Positives = 79/128 (61%), Gaps = 13/128 (10%)
#
# Query: 26 SNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETGGDG--------KIVEVSIKDFSF 77
# +NT N T E ++P E P +N +++T + K VEV I+DF+F
# Sbjct: 129 NNTSNQTA-----AENLTVPEIEIVENPKNNTSNQTAAENLTVPEAEHKTVEVKIEDFAF 183
#
# Query: 78 NPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFEFLFTDPGVYDYSCSIHPS 137
# NP+SVT+S GDTVRWTN+D HTV+GP F SG L +GDS+EF FT G Y Y CSIH S
# Sbjct: 184 NPDSVTISPGDTVRWTNLDLFTHTVTGPDFSSGTLRDGDSYEFTFTREGTYRYYCSIHAS 243
#
# Query: 138 MKGTVIVE 145
# M+G V VE
# Sbjct: 244 MEGVVTVE 251
#
#
# >mlr4661
# Length = 100
#
# Score = 61.6 bits (148), Expect = 5e-10
# Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
#
# Query: 70 VSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSG--PTFESGILENGDSFEFLFTDPGV 127
# V IK FNP ++V+ GDT+ +TN DS+ HT + +F++G L G S + + G
# Sbjct: 23 VQIKGMKFNPSKISVAVGDTITFTNADSMTHTATALDGSFDTGHLATGKSAKVKVSAAGA 82
#
# Query: 128 YDYSCSIHPSMKGTV 142
# + + C+IH SMKG V
# Sbjct: 83 HPFHCAIHSSMKGIV 97
#
#
# >mll8137
# Length = 105
#
# Score = 51.2 bits (121), Expect = 8e-07
# Identities = 24/73 (32%), Positives = 34/73 (45%)
#
# Query: 68 VEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFEFLFTDPGV 127
# +EV+I F+P +V GDT+ W N D V HT + ++ S G
# Sbjct: 27 IEVTIDKLVFSPATVEAKVGDTIEWVNNDVVAHTATVKGGWDVMIPPKKSASLTLKAAGA 86
#
# Query: 128 YDYSCSIHPSMKG 140
# DY C HP+M+G
# Sbjct: 87 VDYFCRFHPNMRG 99
#
#
# >SMb20594
# Length = 105
#
# Score = 50.1 bits (118), Expect = 1e-06
# Identities = 26/91 (28%), Positives = 42/91 (45%), Gaps = 6/91 (6%)
#
# Query: 57 ATSETGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESG---ILE 113
# A + + ++V+I + P + GD V W N D++ HT T E G +L
# Sbjct: 16 AAAAAPSQAETIQVAIDRLVYLPAEIEAKVGDEVEWINRDALVHTA---TVEGGADVLLP 72
#
# Query: 114 NGDSFEFLFTDPGVYDYSCSIHPSMKGTVIV 144
# + + + G +DY C HP+MKG + V
# Sbjct: 73 ANKTGRLVLQEAGSFDYICRYHPNMKGRITV 103
#
#
# >MA0800
# Length = 266
#
# Score = 47.8 bits (112), Expect = 9e-06
# Identities = 37/133 (27%), Positives = 64/133 (47%), Gaps = 11/133 (8%)
#
# Query: 23 GCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETG-GDGKIV----EVSIKDFSF 77
# G + ++ Q + T + VE P + ++++ S +G D K V ++ I +F
# Sbjct: 135 GTVKVSASEMQEEDSETAGETATVENPQVTTEASSASNSGKSDEKNVRNEEKMLIYSTTF 194
#
# Query: 78 NPESVTVSAGDTVRWTNMD-----SVGHTVSGPTFESGILENGDSFEFLFTDPGVYDYSC 132
# +PE++ + GDTV W N+ SV + G +E L G +F + F + G Y +S
# Sbjct: 195 SPETIEIEKGDTVTWVNLKRPKGASVLVSDDG-LWEDTTLYYGKAFSYTFEEAGTYTFSL 253
#
# Query: 133 SIHPSMKGTVIVE 145
# P K T+IV+
# Sbjct: 254 EAMPEAKATIIVK 266
#
#
#
# Score = 39.7 bits (91), Expect = 0.002
# Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
#
# Query: 76 SFNPESVTVSAGDTVRWTNMDSVGHTV----SGPTFESGILENGDSFEFLFTDPGVYDYS 131
# +F PE++ ++AG+ V W N + +E L G +F + F +PG Y ++
# Sbjct: 67 TFAPETIEINAGEEVTWFNFKKPKTPMVLVSEEGLWEETTLYYGKAFSYTFEEPGTYVFA 126
#
# Query: 132 CSIHPSMKGTVIV 144
# +P +KGTV V
# Sbjct: 127 LKDNPEIKGTVKV 139
#
#
# >sll0199
# Length = 126
#
# Score = 45.4 bits (106), Expect = 4e-05
# Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
#
# Query: 55 SNATSETGGD-GKIVEVSIKDFSFNPESVTVSAGDTVRWTN-----------MDSVGHTV 102
# +NAT + G D G +V F P +VT+ AG+ V+W N D V
# Sbjct: 29 ANATVKMGSDSGALV--------FEPSTVTIKAGEEVKWVNNKLSPHNIVFAADGVDADT 80
#
# Query: 103 SGPTFESGI-LENGDSFEFLFTDPGVYDYSCSIH--PSMKGTVIVE 145
# + G+ G+SF FT+PG Y Y C H M G V+VE
# Sbjct: 81 AAKLSHKGLAFAAGESFTSTFTEPGTYTYYCEPHRGAGMVGKVVVE 126
#
#
# >VNG0249G
# Length = 810
#
# Score = 45.1 bits (105), Expect = 5e-05
# Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 37/147 (25%)
#
# Query: 36 ATPTETPSIPVEEPAMVPDSNATSETGGDGKIVE---------VSIKDFSFNPESVTVSA 86
# A + + PV + A + ++ E G +V + + +++P +TVSA
# Sbjct: 663 AVAGDASAAPVGDAASSGEGDSQPELSGGPNVVSGVPDDADHVIDMNAVAYDPAELTVSA 722
#
# Query: 87 GDTVRWTNMDSVGHTVSG-----PT---------FES------------GILENGDSFEF 120
# GDTV WT+ D H+V+ P F+S G + G+S+
# Sbjct: 723 GDTVAWTHADGEAHSVTAYEDDIPADATYWASGGFDSQDAAKTGWANGKGAVTEGESYVH 782
#
# Query: 121 LFTDPGVYDYSCSIHPS--MKGTVIVE 145
# F G ++Y C H + M+GT++VE
# Sbjct: 783 TFETTGEHEYYCIPHKNLGMEGTIVVE 809
#
#
# >MA1454
# Length = 231
#
# Score = 44.3 bits (103), Expect = 9e-05
# Identities = 34/118 (28%), Positives = 55/118 (45%), Gaps = 11/118 (9%)
#
# Query: 37 TPTETPSIPVEEPAMVPDSN----ATSETGGDGKIVEVSIKDFSFNPESVTVSAGDTVRW 92
# TP I E+ V D T + +I V +K++ F P + V+AGDTV W
# Sbjct: 116 TPGLEDGIEEEQTENVTDGEEEVGTVQPTETEPEIYLVRLKNYLFIPSELEVNAGDTVVW 175
#
# Query: 93 TNMDSVGHTVSGPTFESGILEN-----GDSFEFLFTDPGVYDYSCSIHPSMKGTVIVE 145
# N D V E G+ E+ G++ + F + G Y +S + +P+M+ T+ V+
# Sbjct: 176 RNFDE--SNVFTLNSEEGLFEDQQLGYGNTLNYTFVENGSYSFSANGYPNMQMTITVK 231
#
#
# >BH2028
# Length = 143
#
# Score = 38.9 bits (89), Expect = 0.003
# Identities = 34/115 (29%), Positives = 53/115 (45%), Gaps = 10/115 (8%)
#
# Query: 21 AIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETGGDGKI-VEVSIKDFSFNP 79
# A G + +T D + ATP+ET EE A S A SE G+ + + + +FSF+
# Sbjct: 19 ACGSSDDTSTDAEQEATPSET-----EEAA----SGAESEVNGEDVVTLHIQADNFSFDQ 69
#
# Query: 80 ESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFEFLFTDPGVYDYSCSI 134
# E V G TV T + GH + + L G+ F+ G ++ +CS+
# Sbjct: 70 EQYEVPLGATVEITFENVEGHHEAVIEGYNVSLSEGEPVTFVADQAGEFELACSV 124
#
#
# >VNG0795G
# Length = 157
#
# Score = 35.4 bits (80), Expect = 0.046
# Identities = 36/111 (32%), Positives = 47/111 (41%), Gaps = 26/111 (23%)
#
# Query: 59 SETGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSG----------PTFE 108
# S++GG+ I F F P +TVS GDTV W +S H VS P
# Sbjct: 48 SQSGGN-TIAVAPDGGFKFEPSELTVSVGDTVTWEFEES-SHNVSAWPDMHDKISIPDGA 105
#
# Query: 109 SG------------ILENGDSFEFLFTDPGVYDYSCSIH--PSMKGTVIVE 145
# SG +++ G++ E F G Y Y C H M GTV+VE
# Sbjct: 106 SGFGTMDKDGNQFAVVDAGETLEHTFETAGEYTYVCMPHVASGMIGTVVVE 156
#
#
# >MA1452
# Length = 79
#
# Score = 33.9 bits (76), Expect = 0.12
# Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
#
# Query: 77 FNPESVTVSAGDTVRWTNMDSVGHTVSGPT----FESGILENGDSFEFLFTDPGVYDYSC 132
# F PE++ + G+T+ W N++ + + + F+ ++ G SF + F G Y++
# Sbjct: 7 FYPETLELKNGETLVWKNLNRPKQSFTLVSEEGLFDDQVIAYGKSFSYTFDKAGDYNFKL 66
#
# Query: 133 SIHPSMKGTVIV 144
# P + VIV
# Sbjct: 67 EEIPDAELIVIV 78
#
#
# >MA1356
# Length = 141
#
# Score = 33.5 bits (75), Expect = 0.17
# Identities = 21/38 (55%), Positives = 27/38 (70%), Gaps = 4/38 (10%)
#
# Query: 5 MRKELIILPVLFSVFMAIGCT-SNTGNDTQIPATPTET 41
# MRK L++L V+F VF+AIGCT + N+T TPTET
# Sbjct: 1 MRKALLVLMVIFGVFLAIGCTGTEQPNET---GTPTET 35
#
#
# >yghJ
# Length = 675
#
# Score = 33.1 bits (74), Expect = 0.23
# Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
#
# Query: 3 ETMRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETG 62
# +++ K++ + P F + +N D + P+T T +P +PV P PD NA+ +
# Sbjct: 202 DSLYKQIDLAPEEFKKLVNEEVENNAATD-KAPSTHT-SPVVPVTTPGTKPDLNASFVSA 259
#
# Query: 63 GDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTF--ESGILENGDSFEF 120
# + + + P + +S G V DS G+ V+G + SG G++ EF
# Sbjct: 260 NAEQF-------YQYQPTEIILSEGRLV-----DSQGYGVAGVNYYTNSGRGVTGENGEF 307
#
# Query: 121 LFT 123
# F+
# Sbjct: 308 SFS 310
#
#
# >CC1990
# Length = 317
#
# Score = 31.2 bits (69), Expect = 0.70
# Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
#
# Query: 62 GGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGIL 112
# GGD + ++K ++ S GD V++ N +VG VSG F SGIL
# Sbjct: 102 GGDPGVTLTNVK------TALKQSLGDPVQFINPSAVGPKVSGELFRSGIL 146
#
#
# >YPO1855
# Length = 376
#
# Score = 31.2 bits (69), Expect = 0.84
# Identities = 28/101 (27%), Positives = 43/101 (41%), Gaps = 19/101 (18%)
#
# Query: 57 ATSETGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGIL---- 112
# A S D + V++++ D P ++TV AG T + H VS E IL
# Sbjct: 22 AISAQAADIQQVKITVNDKQCEPMALTVPAGKT------QFIVHNVSQKGLEWEILKGVM 75
#
# Query: 113 --ENGDSFEFLFT-------DPGVYDYSCSIHPSMKGTVIV 144
# E ++ FT +PG YD +C + + KG + V
# Sbjct: 76 VVEERENIAPGFTQKMTANLEPGEYDMTCGLLSNPKGKLTV 116
#
#
# >VNG0586C
# Length = 229
#
# Score = 30.8 bits (68), Expect = 0.93
# Identities = 43/152 (28%), Positives = 60/152 (39%), Gaps = 29/152 (19%)
#
# Query: 21 AIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETGGDG-------------KI 67
# A+G + + A + P + +S A +ET G K
# Sbjct: 22 AVGAR----SSSSSSAVHQQAPGNATGNGTAMDNSTAGNETAAGGDSESGDGGGGATTKT 77
#
# Query: 68 VEVSIKDFS-FNPESVTVSAGDTVRWTNMDSVGHTV--------SGPTFESGILENGDSF 118
# V+V + + F+P V VS GDTV+W S GH V +G ++ I+ +
# Sbjct: 78 VKVGPNNQNVFDPAEVYVSPGDTVKWVWEGSTGHNVHATSVPDEAGWDAQTEIVSAPHEY 137
#
# Query: 119 EFLFTDP-GVYDYSCSIHPS--MKGTVIVENN 147
# F P G Y Y C H S MKG VIV N
# Sbjct: 138 SHTFEGPTGEYSYVCDPHKSLGMKGKVIVNEN 169
#
#
# >AGl2859
# Length = 146
#
# Score = 30.8 bits (68), Expect = 1.1
# Identities = 24/86 (27%), Positives = 37/86 (42%), Gaps = 11/86 (12%)
#
# Query: 68 VEVSIKDFSFNPESVTVSAGDTVRW--TNMDSVGHTVSGPT------FESGILENGDSFE 119
# + S + F P+ + + GD VR+ T+ T+ G F+S I D FE
# Sbjct: 32 LHASAETMVFEPDFLEIGPGDRVRFVPTHKSHNAATIDGMVPEGVEGFKSRI---NDEFE 88
#
# Query: 120 FLFTDPGVYDYSCSIHPSMKGTVIVE 145
# F PG Y CS H M ++++
# Sbjct: 89 TGFEKPGFYGIKCSPHYGMGMVMLIK 114
#
#
# >DRA0192
# Length = 137
#
# Score = 30.8 bits (68), Expect = 1.2
# Identities = 16/46 (34%), Positives = 23/46 (49%)
#
# Query: 17 SVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETG 62
# S +A G T + T IP + ++ P +P E A+ SNA E G
# Sbjct: 51 SGMLAPGLTERSMAATVIPGSHSKKPPLPASESALYHPSNALRERG 96
#
#
# >VNG0786G
# Length = 149
#
# Score = 30.4 bits (67), Expect = 1.3
# Identities = 26/94 (27%), Positives = 37/94 (38%), Gaps = 31/94 (32%)
#
# Query: 84 VSAGDTVRWTNMDSVGHTVS---------GPTFESGILEN-------------------- 114
# ++AGDTV W N S HTV+ F SG +
# Sbjct: 56 LTAGDTVTWANTGSRNHTVTAYGSGLPEGASYFASGGFDTEPDARRAWQDNVEGGGNISP 115
#
# Query: 115 GDSFEFLFTDPGVYDYSCSIH--PSMKGTVIVEN 146
# G ++E T PG Y Y C H M+G ++V++
# Sbjct: 116 GATYEVTLTVPGEYYYFCIPHEGAGMRGKLVVDD 149
#
#
# >RSc3253
# Length = 572
#
# Score = 30.4 bits (67), Expect = 1.5
# Identities = 16/60 (26%), Positives = 24/60 (39%)
#
# Query: 32 TQIPATPTETPSIPVEEPAMVPDSNATSETGGDGKIVEVSIKDFSFNPESVTVSAGDTVR 91
# T +P P ++ + P + T TG K + + D FNP+ GD VR
# Sbjct: 421 TLLPGEPLTLEALMAQTAITYPATTLTDMTGATIKTILEDVADNLFNPDPYYQQGGDMVR 480
#
#
# >CAC0486
# Length = 204
#
# Score = 30.0 bits (66), Expect = 1.6
# Identities = 23/75 (30%), Positives = 30/75 (39%), Gaps = 6/75 (8%)
#
# Query: 7 KELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSETGGDGK 66
# K ++I V VFM GC + N E SI EE + + + E GD K
# Sbjct: 7 KIVLIFVVFLGVFMLFGCNNKDKNQNSKRKVGKEN-SIKPEEKKFI-NEYYSDEVSGDSK 64
#
# Query: 67 IVEVSIKDFSFNPES 81
# + F NPES
# Sbjct: 65 ----GLSKFYSNPES 75
#
#
# >BMEII0965
# Length = 146
#
# Score = 30.0 bits (66), Expect = 1.6
# Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
#
# Query: 77 FNPESVTVSAGDTVRWTNMDSVGHTVS---------GPTFESGILENGDSFEFLFTDPGV 127
# F P + +AGDT+ + MD GH V F+S I E+ + PG
# Sbjct: 41 FEPSYIKANAGDTITFIPMDK-GHNVETVKDMIPDGAEKFKSKINEH---YTVTVNQPGA 96
#
# Query: 128 YDYSCSIHPSMKGTVIV 144
# Y C+ H +M ++
# Sbjct: 97 YLIKCTPHYAMSMVALI 113
#
#
# >YPCD1.84c
# Length = 163
#
# Score = 29.6 bits (65), Expect = 2.3
# Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
#
# Query: 77 FNPESVTVSAGDTVRWTNMDSVGHTVSGPTFE-SGILENG 115
# F P +TVS GD VR+T D+ V+ +E +G E+G
# Sbjct: 61 FMPRELTVSQGDRVRFTRSDTDRGYVANSLWEVAGFTEDG 100
#
#
# >RSc2576
# Length = 334
#
# Score = 29.6 bits (65), Expect = 2.5
# Identities = 19/40 (47%), Positives = 24/40 (59%), Gaps = 7/40 (17%)
#
# Query: 65 GKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTVSG 104
# G++ VS++ E VTV+AGDTVRW VG T SG
# Sbjct: 127 GRVTVVSLQP---GEELVTVAAGDTVRWI----VGDTSSG 159
#
#
# >MA2208
# Length = 801
#
# Score = 29.3 bits (64), Expect = 2.8
# Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
#
# Query: 2 GETMRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSET 61
# G T+R +IL V F + C + D IP IP + P+++ N S
# Sbjct: 421 GFTIRHSTVILVVAF-----LTCCAGLYADQSIPIQTDTNSFIPQDMPSLINYKNMQSIM 475
#
# Query: 62 GGDGKIVEVSIK-DFSFNPE 80
# G G + V +K D + +PE
# Sbjct: 476 SGSGDHLNVILKVDDASDPE 495
#
#
# >mlr6404
# Length = 332
#
# Score = 29.3 bits (64), Expect = 3.1
# Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 6/35 (17%)
#
# Query: 72 IKDFSFNP-ESVT-VSAGDTVRWTNMDSVGHTVSG 104
# + D + P E +T VSAGDTVRW +G TVSG
# Sbjct: 117 VTDIALQPGEKLTAVSAGDTVRWV----IGDTVSG 147
#
#
# >PA2807
# Length = 205
#
# Score = 29.3 bits (64), Expect = 3.2
# Identities = 11/25 (44%), Positives = 17/25 (68%)
#
# Query: 68 VEVSIKDFSFNPESVTVSAGDTVRW 92
# +EV + D F P ++ V AG+TVR+
# Sbjct: 69 IEVVLGDMYFKPRAIEVKAGETVRF 93
#
#
# >ECs1264
# Length = 375
#
# Score = 28.9 bits (63), Expect = 4.2
# Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 23/106 (21%)
#
# Query: 55 SNATSETGGDGKIVEVSIKDFSFNPESVTVSAGDT-----------VRWTNMDSV----G 99
# S+A D V+V++ D P ++TV+AG T + W + V
# Sbjct: 19 SSAFMANAADVPQVKVTVTDKQCEPMTITVNAGKTQFIIQNHSQKALEWEILKGVMVVEE 78
#
# Query: 100 HTVSGPTFESGILENGDSFEFLFTDPGVYDYSCSIHPSMKGTVIVE 145
# P F + N PG YD +C + + KG +IV+
# Sbjct: 79 RENIAPGFSQKMTAN--------LQPGEYDMTCGLLTNPKGKLIVK 116
#
#
# >ZycdO
# Length = 375
#
# Score = 28.9 bits (63), Expect = 4.2
# Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 23/106 (21%)
#
# Query: 55 SNATSETGGDGKIVEVSIKDFSFNPESVTVSAGDT-----------VRWTNMDSV----G 99
# S+A D V+V++ D P ++TV+AG T + W + V
# Sbjct: 19 SSAFMANAADVPQVKVTVTDKQCEPMTITVNAGKTQFIIQNHSQKALEWEILKGVMVVEE 78
#
# Query: 100 HTVSGPTFESGILENGDSFEFLFTDPGVYDYSCSIHPSMKGTVIVE 145
# P F + N PG YD +C + + KG +IV+
# Sbjct: 79 RENIAPGFSQKMTAN--------LQPGEYDMTCGLLTNPKGKLIVK 116
#
#
# >ycdO
# Length = 375
#
# Score = 28.9 bits (63), Expect = 4.2
# Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 23/106 (21%)
#
# Query: 55 SNATSETGGDGKIVEVSIKDFSFNPESVTVSAGDT-----------VRWTNMDSV----G 99
# S+A D V+V++ D P ++TV+AG T + W + V
# Sbjct: 19 SSAFMANAADVPQVKVTVTDKQCEPMTITVNAGKTQFIIQNHSQKALEWEILKGVMVVEE 78
#
# Query: 100 HTVSGPTFESGILENGDSFEFLFTDPGVYDYSCSIHPSMKGTVIVE 145
# P F + N PG YD +C + + KG +IV+
# Sbjct: 79 RENIAPGFSQKMTAN--------LQPGEYDMTCGLLTNPKGKLIVK 116
#
#
# >VNG1188G
# Length = 205
#
# Score = 28.9 bits (63), Expect = 4.2
# Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
#
# Query: 60 ETGGDGKIVEVSIK----DFSFNPESVTVSAGDTVRW---TNMDSVGHTVSGPTFESGIL 112
# ETG V+V + + F P +V V G TV + +N +V + + G +
# Sbjct: 57 ETGSSEVTVDVGVDANGGAYGFGPAAVRVDPGTTVTFEWVSNTHNVAVESQPDSADWGGV 116
#
# Query: 113 E----NGDSFEFLFTDPGVYDYSCSIHPS--MKGTVIV 144
# E G + F GVY Y CS H + MKG V+V
# Sbjct: 117 EEINNEGYTDSHTFETAGVYTYFCSPHRAMGMKGAVVV 154
#
#
# >MA2148
# Length = 389
#
# Score = 28.9 bits (63), Expect = 4.2
# Identities = 21/67 (31%), Positives = 29/67 (42%), Gaps = 7/67 (10%)
#
# Query: 9 LIILPVLFSVFMAIGCTSNTGNDTQ---IPATPTE----TPSIPVEEPAMVPDSNATSET 61
# L I+ V+F+VF GC + G D Q I T E T +PVE ++ S
# Sbjct: 16 LAIILVIFTVFTVSGCVTKGGMDDQAKTITVTDMEGRSVTVKVPVERIVLMESSKTHELA 75
#
# Query: 62 GGDGKIV 68
# DG +
# Sbjct: 76 AIDGAAI 82
#
#
# >SMc04047
# Length = 147
#
# Score = 28.5 bits (62), Expect = 4.7
# Identities = 21/79 (26%), Positives = 34/79 (42%), Gaps = 13/79 (16%)
#
# Query: 76 SFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILENGDSFE--------FLFTDPGV 127
# +F P + GDTV + D GH + + G E ++++ + PGV
# Sbjct: 39 AFEPAVIRAQPGDTVTFVAKDK-GH--NSALMKGGAPEGAETWKGKINEEITVTLSKPGV 95
#
# Query: 128 YDYSCSIHPSMK--GTVIV 144
# Y Y C+ H M G ++V
# Sbjct: 96 YMYQCAPHVGMGMIGAIVV 114
#
#
# >MA2280
# Length = 274
#
# Score = 28.5 bits (62), Expect = 5.0
# Identities = 25/57 (43%), Positives = 31/57 (53%)
#
# Query: 5 MRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSET 61
# MRKELI+L VL VF+AIGC N TPT ++P +E + S A S T
# Sbjct: 1 MRKELIVLLVLLGVFLAIGCAENGSEAVNETGTPTAETAVPEQESETILVSAAASLT 57
#
#
# >CC2686
# Length = 327
#
# Score = 28.5 bits (62), Expect = 5.1
# Identities = 18/35 (51%), Positives = 21/35 (59%), Gaps = 6/35 (17%)
#
# Query: 72 IKDFSFNP-ESVT-VSAGDTVRWTNMDSVGHTVSG 104
# + D + P E +T VSAGDTVRW VG T SG
# Sbjct: 120 VSDVALEPGEQLTAVSAGDTVRWV----VGDTTSG 150
#
#
# >SP0462
# Length = 893
#
# Score = 28.5 bits (62), Expect = 5.2
# Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
#
# Query: 65 GKIVEVSI-KDFSFNPESVTVSAGDTVRWTNMDSVGHTVSGPTFESGILEN 114
# G+++++ + D F+P T++A D R N G V GP + G+L+N
# Sbjct: 603 GELIDLQLGTDGRFDPADYTLTANDGSRLEN----GQAVGGPQNDGGLLKN 649
#
#
# >PAB1881
# Length = 862
#
# Score = 28.5 bits (62), Expect = 5.6
# Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 9/105 (8%)
#
# Query: 33 QIPATPTETPSIPVEEPAMVPDSNATSETGGDGKIVEVSIKDFS---FNPES---VTVSA 86
# ++ TP E+ P+EE A S ++ E I D + ++PES + +S
# Sbjct: 54 KVSPTPEESSQTPIEEKTPQEQEVAESTPSPQPEVKEGEIYDLTHIEYSPESAGLIWISL 113
#
# Query: 87 G-DTVRWTNMDSVGHTVSGPTFESGILENGDSFEFLFTDPGVYDY 130
# D RW + ++ +S +G F F + D +YDY
# Sbjct: 114 WIDNPRWKS--TLPDFISKQPGNVWFYSSGKLFAFEYGDETLYDY 156
#
#
# >PSLT108
# Length = 1752
#
# Score = 28.5 bits (62), Expect = 5.6
# Identities = 10/20 (50%), Positives = 15/20 (75%)
#
# Query: 77 FNPESVTVSAGDTVRWTNMD 96
# +NPE++ V AGD +R+T D
# Sbjct: 1328 YNPETIRVGAGDRMRFTKSD 1347
#
#
# >alr0436
# Length = 470
#
# Score = 28.5 bits (62), Expect = 5.6
# Identities = 15/47 (31%), Positives = 22/47 (45%)
#
# Query: 1 MGETMRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVE 47
# M T+ L IL + ++ IGCT+N + +P P I VE
# Sbjct: 1 MPNTLFSPLFILALGLTLTQTIGCTNNPDDSAVAQTSPKAEPQIVVE 47
#
#
# >MA1237
# Length = 276
#
# Score = 28.5 bits (62), Expect = 5.8
# Identities = 25/57 (43%), Positives = 31/57 (53%)
#
# Query: 5 MRKELIILPVLFSVFMAIGCTSNTGNDTQIPATPTETPSIPVEEPAMVPDSNATSET 61
# MRKELI+L VL VF+AIGC N TPT ++P +E + S A S T
# Sbjct: 1 MRKELIVLLVLLGVFLAIGCAENGSEAVNETGTPTAETAVPGQESETILVSAAASLT 57
#
#
# >ECU09g1800
# Length = 934
#
# Score = 27.7 bits (60), Expect = 8.3
# Identities = 15/67 (22%), Positives = 29/67 (42%)
#
# Query: 43 SIPVEEPAMVPDSNATSETGGDGKIVEVSIKDFSFNPESVTVSAGDTVRWTNMDSVGHTV 102
# ++P+E+ + S+ +T GD V + N + + + RW D+ G +
# Sbjct: 527 TLPMEKAGLDVRSDLDRQTPGDEDSVLTEELNECLNSDEDILHSAAEKRWKKEDNAGGDI 586
#
# Query: 103 SGPTFES 109
# G TF +
# Sbjct: 587 GGTTFSN 593
#
#
# >mlr5174
# Length = 181
#
# Score = 27.7 bits (60), Expect = 9.3
# Identities = 13/22 (59%), Positives = 16/22 (72%)
#
# Query: 57 ATSETGGDGKIVEVSIKDFSFN 78
# A +TGG+GK+ EVS K F FN
# Sbjct: 27 ACRDTGGEGKLFEVSGKIFVFN 48
#
#
Database: myva
Posted date: Sep 16, 2002 2:25 PM
Number of letters in database: 59,019,183
Number of sequences in database: 192,987
Lambda K H
0.312 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,862,236
Number of Sequences: 192987
Number of extensions: 794105
Number of successful extensions: 1709
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1643
Number of HSP's gapped (non-prelim): 92
length of query: 147
length of database: 59,019,183
effective HSP length: 99
effective length of query: 48
effective length of database: 39,913,470
effective search space: 1915846560
effective search space used: 1915846560
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
S2: 60 (27.7 bits)