21
proteins |
P |
KOG1965 |
Sodium/hydrogen exchanger protein |
36 hits
195 letters
hsa 
984 = Hs22040889 (195) =
hsa 
144 = Hs14211919 (725) =
hsa 143 = Hs5454070 (669) =
spo 
122 = SPAC15A10.06 (569) =
hsa 118 = Hs22062123 (581) =
dme 
118 = 7297156 (645) =
sce 
117 = YDR456w (633) =
cel 
116 = CE18762 (629) =
dme 114 = 7296268 (649) =
hsa 111 _ Hs15529998 (812) KOG1966
hsa 108 _ Hs4759144 (896) KOG1966
dme 108 _ 7298749 (518) KOG1966
hsa 106 _ Hs6806921 (834) KOG1966
hsa 106 _ Hs15295444 (815) KOG1966
cel 104 _ CE17339 (478) KOG1966
ath 
103 = At1g79610 (531) =
ath 100 = At1g54370 (487) =
cel 94 = CE21402 (703) =
cel 92 _ CE29549 (627) KOG1966
cel 92 _ CE03477 (798) KOG1966
cel 92 _ CE02644 (684) KOG1966
cel 90 _ CE08985 (651) KOG1966
cel 89 _ CE29015 (606) KOG1966
cel 89 _ CE27560 (667) KOG1966
cel 89 _ CE27559 (647) KOG1966
cel 84 _ CE11382 (634) KOG1966
ath 82 = At5g55470 (529) =
ath 74 = At3g06370 (552) =
ath 74 = At1g14660 (697) =
hsa 72 _ Hs17484924 (573) KOG1966
ath 72 = At3g05030 (546) =
ath 70 = At5g27150 (538) =
ath 70 = At2g01980 (1162) =
ath 65 At4g20200 (604)
hsa 63 _ Hs22052017 (257) KOG2592
ath 63 At5g41550 (1085)
BLASTP 2.2.4 [Aug-26-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Hs22040889
(195 letters)
Database: kyvama
112,920 sequences; 47,500,486 total letters
Score E
Sequences producing significant alignments: (bits) Value
Hs22040889 383 e-106
Hs14211919 60 3e-09
Hs5454070 60 4e-09
SPAC15A10.06 52 1e-06
Hs22062123 50 3e-06
7297156 50 3e-06
YDR456w 50 4e-06
CE18762 49 5e-06
7296268 49 8e-06
Hs15529998 47 2e-05
Hs4759144 46 4e-05
7298749 46 4e-05
Hs6806921 45 7e-05
Hs15295444 45 7e-05
CE17339 45 1e-04
At1g79610 44 2e-04
At1g54370 43 3e-04
CE21402 41 0.002
CE29549 40 0.003
CE03477 40 0.003
CE02644 40 0.003
CE08985 39 0.005
CE29015 39 0.006
CE27560 39 0.006
CE27559 39 0.006
CE11382 37 0.025
At5g55470 36 0.042
At3g06370 33 0.36
At1g14660 33 0.36
Hs17484924 32 0.61
At3g05030 32 0.61
At5g27150 32 1.0
At2g01980 32 1.0
At4g20200 30 3.9
Hs22052017 29 6.7
At5g41550 29 6.7
# >Hs22040889
# Length = 195
#
# Score = 383 bits (984), Expect = e-106
# Identities = 183/195 (93%), Positives = 183/195 (93%)
#
# Query: 1 MVPLVNVTESRTAFIAPLILLPWVCFRTLKHFTEGRLDPLQAAVWVAIAAETDPNMQGLI 60
# MVPLVNVTESRTAFIAPLILLPWVCFRTLKHFTEGRLDPLQAAVWVAIAAETDPNMQGLI
# Sbjct: 1 MVPLVNVTESRTAFIAPLILLPWVCFRTLKHFTEGRLDPLQAAVWVAIAAETDPNMQGLI 60
#
# Query: 61 MYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDPGNSCRQXXXXXXXXXXXXWTQNMP 120
# MYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDPGNSCRQ WTQNMP
# Sbjct: 61 MYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDPGNSCRQSSLTIAILSLSAWTQNMP 120
#
# Query: 121 SRPASHPAGLLWRHMNYLTFDGVDNLKPLSIWGYYGYGCSVTVLAIFHELHVDPDLYTLL 180
# SRPASHPAGLLWRHMNYLTFDGVDNLKPLSIWGYYGYGCSVTVLAIFHELHVDPDLYTLL
# Sbjct: 121 SRPASHPAGLLWRHMNYLTFDGVDNLKPLSIWGYYGYGCSVTVLAIFHELHVDPDLYTLL 180
#
# Query: 181 FGESVLNDAVAIVLT 195
# FGESVLNDAVAIVLT
# Sbjct: 181 FGESVLNDAVAIVLT 195
#
#
# >Hs14211919
# Length = 725
#
# Score = 60.1 bits (144), Expect = 3e-09
# Identities = 30/35 (85%), Positives = 32/35 (90%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLT 195
# VTVLAIF+ELH D DLY LLFGESVLNDAVAIVL+
# Sbjct: 265 VTVLAIFNELHADVDLYALLFGESVLNDAVAIVLS 299
#
#
#
# Score = 48.5 bits (114), Expect = 8e-06
# Identities = 23/39 (58%), Positives = 30/39 (75%), Gaps = 1/39 (2%)
#
# Query: 58 GLIMYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDP 96
# G +MYG VK M GQL + F++TDCLFFG+++SATDP
# Sbjct: 227 GNLMYGVVKLMKIMGQLSD-KFYYTDCLFFGAIISATDP 264
#
#
# >Hs5454070
# Length = 669
#
# Score = 59.7 bits (143), Expect = 4e-09
# Identities = 30/35 (85%), Positives = 32/35 (90%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLT 195
# VTVLAIFHEL VD +LY LLFGESVLNDAVAIVL+
# Sbjct: 233 VTVLAIFHELQVDVELYALLFGESVLNDAVAIVLS 267
#
#
#
# Score = 50.4 bits (119), Expect = 2e-06
# Identities = 25/39 (64%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
#
# Query: 58 GLIMYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDP 96
# G IMYG V M GQL GDF+FTDCL FG+++SATDP
# Sbjct: 195 GSIMYGCVTLMKVTGQLA-GDFYFTDCLLFGAIVSATDP 232
#
#
# >SPAC15A10.06
# Length = 569
#
# Score = 51.6 bits (122), Expect = 1e-06
# Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
#
# Query: 129 GLLWRHMNYLTFDGVDN--LKPLSIWGYYGYGCSVTVLAIFHELHVDPDLYTLLFGESVL 186
# G+L ++L F+ + ++ LS+ VTVLAIF+ VD LYT++FGES+L
# Sbjct: 142 GVLVYIFSFLNFENLSMTFVEALSMGATLSATDPVTVLAIFNSYKVDQKLYTIIFGESIL 201
#
# Query: 187 NDAVAIVL 194
# NDAVAIV+
# Sbjct: 202 NDAVAIVM 209
#
#
# >Hs22062123
# Length = 581
#
# Score = 50.1 bits (118), Expect = 3e-06
# Identities = 24/35 (68%), Positives = 29/35 (82%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLT 195
# V +AIF+ LHVDP L L+FGES+LNDAV+IVLT
# Sbjct: 203 VATIAIFNALHVDPVLNMLVFGESILNDAVSIVLT 237
#
#
# >7297156
# Length = 645
#
# Score = 50.1 bits (118), Expect = 3e-06
# Identities = 24/34 (70%), Positives = 30/34 (87%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# +T+LAIF++L VD +LY L+ GESVLNDAVAIVL
# Sbjct: 281 LTILAIFNDLRVDVNLYALVLGESVLNDAVAIVL 314
#
#
#
# Score = 33.1 bits (74), Expect = 0.36
# Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
#
# Query: 58 GLIMYGFVKAMIHAGQLKNGDFHFTDCLFFGSLMSATDP 96
# G MYG VK M + + F F D L+FG+L+S TDP
# Sbjct: 245 GGFMYGCVKLM---PKYLSSSFTFLDSLYFGALISPTDP 280
#
#
# >YDR456w
# Length = 633
#
# Score = 49.7 bits (117), Expect = 4e-06
# Identities = 21/34 (61%), Positives = 30/34 (87%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# VT+L+IF+ VDP LYT++FGES+LNDA++IV+
# Sbjct: 203 VTILSIFNAYKVDPKLYTIIFGESLLNDAISIVM 236
#
#
# >CE18762
# Length = 629
#
# Score = 49.3 bits (116), Expect = 5e-06
# Identities = 20/35 (57%), Positives = 32/35 (91%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLT 195
# VT++++F++++V+ DL+ L+FGES LNDAVAIVL+
# Sbjct: 239 VTIISVFNDMNVEADLFALIFGESALNDAVAIVLS 273
#
#
#
# Score = 28.5 bits (62), Expect = 8.7
# Identities = 11/18 (61%), Positives = 15/18 (83%)
#
# Query: 79 FHFTDCLFFGSLMSATDP 96
# + F + LFFG+L+SATDP
# Sbjct: 221 YSFKELLFFGALISATDP 238
#
#
# >7296268
# Length = 649
#
# Score = 48.5 bits (114), Expect = 8e-06
# Identities = 23/35 (65%), Positives = 28/35 (79%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLT 195
# V +AIFH L VDP L L+FGES+LNDA++IVLT
# Sbjct: 244 VATVAIFHALDVDPILNMLVFGESILNDAISIVLT 278
#
#
# >Hs15529998
# Length = 812
#
# Score = 47.4 bits (111), Expect = 2e-05
# Identities = 21/34 (61%), Positives = 27/34 (78%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V VLA+F +HV+ LY L+FGES+LNDAV +VL
# Sbjct: 220 VAVLAVFENIHVNEQLYILVFGESLLNDAVTVVL 253
#
#
# >Hs4759144
# Length = 896
#
# Score = 46.2 bits (108), Expect = 4e-05
# Identities = 20/34 (58%), Positives = 28/34 (81%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V VLA+F E+HV+ L+ ++FGES+LNDAV +VL
# Sbjct: 187 VAVLAVFEEVHVNETLFIIVFGESLLNDAVTVVL 220
#
#
# >7298749
# Length = 518
#
# Score = 46.2 bits (108), Expect = 4e-05
# Identities = 20/34 (58%), Positives = 28/34 (81%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V VLA+F E+HV+ LY ++FGES+LNDAV +V+
# Sbjct: 122 VAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVM 155
#
#
# >Hs6806921
# Length = 834
#
# Score = 45.4 bits (106), Expect = 7e-05
# Identities = 20/34 (58%), Positives = 28/34 (81%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V VLA+F E+HV+ L+ ++FGES+LNDAV +VL
# Sbjct: 194 VAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVL 227
#
#
# >Hs15295444
# Length = 815
#
# Score = 45.4 bits (106), Expect = 7e-05
# Identities = 20/34 (58%), Positives = 28/34 (81%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V VLA+F E+H++ L+ L+FGES+LNDAV +VL
# Sbjct: 240 VAVLAVFEEIHINELLHILVFGESLLNDAVTVVL 273
#
#
#
# Score = 28.5 bits (62), Expect = 8.7
# Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
#
# Query: 14 FIAPLILLPWVCFRTLKHFTEGRLDPLQAAVWVAIAAETDPNMQGLIMYGFVKAMIHAGQ 73
# F+ P I+L F L+ FTE + I A + G + A+ G
# Sbjct: 164 FLLPPIILDAGYFLPLRQFTEN-------LGTILIFAVVGTLWNAFFLGGLMYAVCLVGG 216
#
# Query: 74 LKNGDFHFTDCLFFGSLMSATDP 96
# + + D L FGS++SA DP
# Sbjct: 217 EQINNIGLLDNLLFGSIISAVDP 239
#
#
# >CE17339
# Length = 478
#
# Score = 44.7 bits (104), Expect = 1e-04
# Identities = 20/34 (58%), Positives = 27/34 (78%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V VL++F E+HV+ LY +FGES+LNDAV +VL
# Sbjct: 114 VAVLSVFEEIHVNKLLYITVFGESLLNDAVTVVL 147
#
#
# >At1g79610
# Length = 531
#
# Score = 44.3 bits (103), Expect = 2e-04
# Identities = 23/33 (69%), Positives = 26/33 (78%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIV 193
# VTVL+IF EL D +LY L+FGESVLNDA IV
# Sbjct: 146 VTVLSIFQELGSDVNLYALVFGESVLNDADEIV 178
#
#
#
# Score = 30.8 bits (68), Expect = 1.8
# Identities = 12/16 (75%), Positives = 14/16 (87%)
#
# Query: 81 FTDCLFFGSLMSATDP 96
# F +CL FGSL+SATDP
# Sbjct: 130 FVECLMFGSLISATDP 145
#
#
# >At1g54370
# Length = 487
#
# Score = 43.1 bits (100), Expect = 3e-04
# Identities = 20/31 (64%), Positives = 26/31 (83%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVA 191
# VTVL+IF ++ D +LY L+FGESVLNDAV+
# Sbjct: 152 VTVLSIFQDVGTDVNLYALVFGESVLNDAVS 182
#
#
#
# Score = 29.6 bits (65), Expect = 3.9
# Identities = 11/16 (68%), Positives = 14/16 (86%)
#
# Query: 81 FTDCLFFGSLMSATDP 96
# F +CL FG+L+SATDP
# Sbjct: 136 FVECLMFGALISATDP 151
#
#
# >CE21402
# Length = 703
#
# Score = 40.8 bits (94), Expect = 0.002
# Identities = 21/34 (61%), Positives = 26/34 (75%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V LAIF + V+ LY L+FGES+LNDAV+IVL
# Sbjct: 271 VGTLAIFQAVKVESLLYMLVFGESMLNDAVSIVL 304
#
#
# >CE29549
# Length = 627
#
# Score = 40.0 bits (92), Expect = 0.003
# Identities = 19/34 (55%), Positives = 25/34 (72%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+ IF EL V+ L+ +FGES+LND VA+VL
# Sbjct: 171 VAVIVIFEELKVNEVLFIAVFGESLLNDGVAVVL 204
#
#
# >CE03477
# Length = 798
#
# Score = 40.0 bits (92), Expect = 0.003
# Identities = 19/33 (57%), Positives = 25/33 (75%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIV 193
# V VLA+F E+ V+ LY ++FGES+ NDAV IV
# Sbjct: 249 VAVLAVFQEVGVNKMLYFMVFGESLFNDAVTIV 281
#
#
# >CE02644
# Length = 684
#
# Score = 40.0 bits (92), Expect = 0.003
# Identities = 20/34 (58%), Positives = 25/34 (72%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V+VL+ F EL V L+ L+FGES+ NDAV IVL
# Sbjct: 170 VSVLSTFAELDVKKSLFILIFGESLCNDAVTIVL 203
#
#
# >CE08985
# Length = 651
#
# Score = 39.3 bits (90), Expect = 0.005
# Identities = 17/34 (50%), Positives = 25/34 (73%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+AIF E+HV+ L+ +FGE++ ND V +VL
# Sbjct: 159 VAVIAIFEEIHVNEFLFINVFGEALFNDGVTVVL 192
#
#
# >CE29015
# Length = 606
#
# Score = 38.9 bits (89), Expect = 0.006
# Identities = 16/34 (47%), Positives = 25/34 (73%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+A+F E+HV+ L+ +FGE++ ND V +VL
# Sbjct: 118 VAVIAVFEEIHVNEFLFINVFGEALFNDGVTVVL 151
#
#
# >CE27560
# Length = 667
#
# Score = 38.9 bits (89), Expect = 0.006
# Identities = 16/34 (47%), Positives = 25/34 (73%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+A+F E+HV+ L+ +FGE++ ND V +VL
# Sbjct: 178 VAVIAVFEEIHVNEFLFINVFGEALFNDGVTVVL 211
#
#
# >CE27559
# Length = 647
#
# Score = 38.9 bits (89), Expect = 0.006
# Identities = 16/34 (47%), Positives = 25/34 (73%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+A+F E+HV+ L+ +FGE++ ND V +VL
# Sbjct: 158 VAVIAVFEEIHVNEFLFINVFGEALFNDGVTVVL 191
#
#
# >CE11382
# Length = 634
#
# Score = 37.0 bits (84), Expect = 0.025
# Identities = 17/34 (50%), Positives = 24/34 (70%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+ IF EL V+ L+ +FGES+ ND V++VL
# Sbjct: 189 VAVIVIFEELAVNDVLFIAVFGESLFNDGVSVVL 222
#
#
# >At5g55470
# Length = 529
#
# Score = 36.2 bits (82), Expect = 0.042
# Identities = 23/63 (36%), Positives = 33/63 (51%), Gaps = 1/63 (1%)
#
# Query: 132 WRHMNYLTFDGVDNLKPLSIWGYYGYGCSVTVLAIFHELHVDPDLYTLLFGESVLNDAVA 191
# W L F G+ L+I + +V L I H+ P LY+L+FGE V+NDA +
# Sbjct: 130 WWLFPKLGFKGLSARDYLAIGTIFSSTDTVCTLQILHQDET-PLLYSLVFGEGVVNDATS 188
#
# Query: 192 IVL 194
# +VL
# Sbjct: 189 VVL 191
#
#
# >At3g06370
# Length = 552
#
# Score = 33.1 bits (74), Expect = 0.36
# Identities = 21/56 (37%), Positives = 31/56 (54%), Gaps = 7/56 (12%)
#
# Query: 145 NLKPLSIWGYYGYGC------SVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# N+ L+I Y G SV L + ++ P LY+L+FGE V+NDA ++VL
# Sbjct: 140 NIGDLTIADYLAIGAIFSATDSVCTLQVLNQDET-PLLYSLVFGEGVVNDATSVVL 194
#
#
# >At1g14660
# Length = 697
#
# Score = 33.1 bits (74), Expect = 0.36
# Identities = 17/46 (36%), Positives = 27/46 (57%)
#
# Query: 149 LSIWGYYGYGCSVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# L + G G V V+A+ EL + TL+ GES++ND V++V+
# Sbjct: 160 LLLGGLLGATDPVAVVALLKELGASKKMTTLIDGESLMNDGVSVVV 205
#
#
# >Hs17484924
# Length = 573
#
# Score = 32.3 bits (72), Expect = 0.61
# Identities = 14/32 (43%), Positives = 23/32 (71%)
#
# Query: 163 VLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# VL +F E+H + L+ ++F E +LND+V +VL
# Sbjct: 257 VLVVFEEVHGNEVLFIIIFRELLLNDSVIMVL 288
#
#
# >At3g05030
# Length = 546
#
# Score = 32.3 bits (72), Expect = 0.61
# Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
#
# Query: 149 LSIWGYYGYGCSVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# L+I + SV L + ++ P LY+L+FGE V+NDA ++VL
# Sbjct: 149 LAIGAIFAATDSVCTLQVLNQDET-PLLYSLVFGEGVVNDATSVVL 193
#
#
# >At5g27150
# Length = 538
#
# Score = 31.6 bits (70), Expect = 1.0
# Identities = 21/56 (37%), Positives = 31/56 (54%), Gaps = 4/56 (7%)
#
# Query: 139 TFDGVDNLKPLSIWGYYGYGCSVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# TFD D L +I+ C++ VL P LY+L+FGE V+NDA ++V+
# Sbjct: 140 TFDLGDYLAIGAIFAATDSVCTLQVL----NQDETPLLYSLVFGEGVVNDATSVVV 191
#
#
# >At2g01980
# Length = 1162
#
# Score = 31.6 bits (70), Expect = 1.0
# Identities = 15/34 (44%), Positives = 22/34 (64%)
#
# Query: 161 VTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVL 194
# V V+A+ EL L T++ GES++ND AIV+
# Sbjct: 174 VAVVALLKELGASKKLSTIIEGESLMNDGTAIVV 207
#
#
# >At4g20200
# Length = 604
#
# Score = 29.6 bits (65), Expect = 3.9
# Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
#
# Query: 118 NMPSRPASHPAGLLWRHMNYLTFDGVDNLK-----PLSIWGYYGYGCSVTV 163
# + PS+P H + + N LTFD + ++ P S W +YG+ S+ V
# Sbjct: 36 SFPSKPLKH---IRLKATNTLTFDDQERIRKFKKLPTSEWTHYGHSISIDV 83
#
#
# >Hs22052017
# Length = 257
#
# Score = 28.9 bits (63), Expect = 6.7
# Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
#
# Query: 115 WTQNMPSRPASHPAGLLWRHMNYLTFDGVDNLKPLSIWGYYGYGCSVTVLAIFHELHVDP 174
# W QN +G++ ++ YLTF + + + +G ++ V +L+ D
# Sbjct: 47 WVQNRQPHSGLLQSGVISCYVTYLTFSALSSKPAEVVLDEHGKNVTICVPDFGQDLYRDE 106
#
# Query: 175 DLYTLLFGESVL 186
# +L T+L G S+L
# Sbjct: 107 NLVTIL-GTSLL 117
#
#
# >At5g41550
# Length = 1085
#
# Score = 28.9 bits (63), Expect = 6.7
# Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
#
# Query: 120 PSRPASHPAGL---LWRHMNYLTFDGVDNLKPLSIWGYYGYGCSVTVLAIFHEL 170
# PSR GL L + + L F+G D++K + IWG G G S A++++L
# Sbjct: 179 PSRDFEGMVGLEAHLTKLNSLLCFEG-DDVKMIGIWGPAGIGKSTIARALYNQL 231
#
#
Database: kyvama
Posted date: Nov 8, 2002 2:42 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Lambda K H
0.326 0.141 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,773,239
Number of Sequences: 112920
Number of extensions: 671873
Number of successful extensions: 1457
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1403
Number of HSP's gapped (non-prelim): 55
length of query: 195
length of database: 47,500,486
effective HSP length: 103
effective length of query: 92
effective length of database: 35,869,726
effective search space: 3300014792
effective search space used: 3300014792
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
S2: 62 (28.5 bits)