Transcribed locus, strongly similar to NP_566469.1 EIF4A1; ATP-dependent helicase [Arabidopsis thaliana]

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UGID:2609539 UniGene Sof.17830 Saccharum officinarum (sugarcane)

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Transcribed locus, strongly similar to NP_566469.1 EIF4A1; ATP-dependent helicase [Arabidopsis thaliana]

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001105396.1	translational initiation factor eIF-4A	Z. mays	99.3	413
NP_001045878.1	Os02g0146600	O. sativa	99.0	413
NP_566469.1	EIF4A1; ATP-dependent helicase	A. thaliana	95.6	411
XP_001691452.1	eukaryotic initiation factor 4A-like protein	C. reinhardtii	91.8	412
XP_702649.2	PREDICTED: hypothetical protein	D. rerio	83.9	279
NP_001086413.1	translation initiation factor eIF4A II	X. laevis	78.9	392
NP_659207.1	eukaryotic translation initiation factor 4A1	M. musculus	78.5	403
NP_001407.1	eukaryotic translation initiation factor 4A, isoform 1	H. sapiens	78.5	403
XP_958421.2	eIF4A	N. crassa	76.9	393
NP_476595.1	CG9075-PC, isoform C	D. melanogaster	74.4	390
NP_001022623.1	INitiation Factor family member (inf-1)	C. elegans	74.0	388
NP_012397.1	translation initiation factor eIF4A; Tif2p	S. cerevisiae	69.8	394

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	inflorescence; stem; leaf; other; crown; root; bud; whole plant; callus; meristem; unspecified tissue

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

EST sequences (10 of 149) [Show all sequences]

BU102863.1		unspecified tissue		P
BQ536254.1		stem	5' read	P
BQ535879.1		stem	5' read	P
CA264060.1	Clone SCSBLB2037H12	bud	5' read	P
CA264451.1	Clone SCQGLB2042F02	bud	5' read	P
CA264479.1	Clone SCQGLB2043B04	bud	5' read	P
CA261666.1	Clone SCBGLB2012B07	bud	5' read	P
CA262840.1	Clone SCPRLB2026A04	bud	5' read	P
CA263247.1	Clone SCRLLB2031A03	bud	5' read	P
CA264339.1	Clone SCQGLB2041C07	bud	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria