|
|
Cancer Genome Anatomy Project |
| NCI > CGAP > GAI > SNP Maps > Chr 9 > SNPs Localized to Interval 5 |
|
D9S161 - D9S273 42.4 cM - 57.1 cM / 85.37 cR - 240.14 cR |
| UniGene | Gene Symbol | Description | SNP IDs | SNP Summary | CGAP Gene Info |
| Confirmed SNPs | |||||
| Hs.567229 | ACO1 | Aconitase 1, soluble | CGAP-C-60192 |
SNPs | Gene Info |
| Hs.493819 | GLIPR2 | GLI pathogenesis-related 2 | CGAP-C-12001 |
SNPs | Gene Info |
| Validated SNPs | |||||
| Hs.493639 | C9orf72 | Chromosome 9 open reading frame 72 | CGAP-C-53185 |
SNPs | Gene Info |
| Hs.350927 | SLC25A6 | Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 | CGAP-C-49248 |
SNPs | Gene Info |
| Hs.174021 | - | Transcribed locus | CGAP-C-247889 |
SNPs | Gene Info |
| Hs.237506 | DNAJB5 | DnaJ (Hsp40) homolog, subfamily B, member 5 | CGAP-C-54137 |
SNPs | Gene Info |
| Hs.190622 | DDX58 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 58 | CGAP-C-55543 |
SNPs | Gene Info |
| Hs.272011 | B4GALT1 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | CGAP-C-55811 CGAP-C-61534 |
SNPs | Gene Info |
| Hs.268963 | UBAP1 | Ubiquitin associated protein 1 | CGAP-C-244801 |
SNPs | Gene Info |
| Hs.591088 | IL11RA | Interleukin 11 receptor, alpha | CGAP-C-270957 |
SNPs | Gene Info |
| Hs.643648 | - | Transcribed locus, strongly similar to NP_060281.2 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] | CGAP-C-47976 |
SNPs | Gene Info |
| Hs.493739 | UBAP2 | Ubiquitin associated protein 2 | CGAP-C-51388 CGAP-C-58230 |
SNPs | Gene Info |
| Hs.493750 | WDR40A | WD repeat domain 40A | CGAP-C-261991 |
SNPs | Gene Info |
| Hs.7989 | KIAA1045 | KIAA1045 | CGAP-C-270317 |
SNPs | Gene Info |
| Hs.493791 | UNC13B | Unc-13 homolog B (C. elegans) | CGAP-C-59743 |
SNPs | Gene Info |
| Hs.529782 | VCP | Valosin-containing protein | CGAP-C-257562 |
SNPs | Gene Info |
| Hs.522114 | CLTA | Clathrin, light chain (Lca) | CGAP-C-630020 |
SNPs | Gene Info |
| Hs.446271 | LOC401504 | Hypothetical gene supported by AK091718 | CGAP-C-615140 CGAP-C-615141 |
SNPs | Gene Info |
| Hs.155742 | GRHPR | Glyoxylate reductase/hydroxypyruvate reductase | CGAP-C-251488 |
SNPs | Gene Info |
| Hs.436219 | ALDH1B1 | Aldehyde dehydrogenase 1 family, member B1 | CGAP-C-623501 |
SNPs | Gene Info |
| Hs.388918 | RECK | Reversion-inducing-cysteine-rich protein with kazal motifs | CGAP-C-250815 |
SNPs | Gene Info |
| Hs.521482 | SHB | Src homology 2 domain containing adaptor protein B | CGAP-C-255484 |
SNPs | Gene Info |
| Hs.63287 | CA9 | Carbonic anhydrase IX | CGAP-C-610038 |
SNPs | Gene Info |
| Hs.657931 | - | Transcribed locus | CGAP-C-54606 |
SNPs | Gene Info |
| Hs.493819 | GLIPR2 | GLI pathogenesis-related 2 | CGAP-C-47805 CGAP-C-57216 CGAP-C-57750 |
SNPs | Gene Info |
| Hs.29978 | FXN | Frataxin | CGAP-C-56485 |
SNPs | Gene Info |
| Hs.655572 | FAM122A | Family with sequence similarity 122A | CGAP-C-51212 |
SNPs | Gene Info |
| Predicted SNPs | |||||
| Hs.493639 | C9orf72 | Chromosome 9 open reading frame 72 | CGAP-C-2402302 |
SNPs | Gene Info |
| Hs.306000 | SLC4A1AP | Solute carrier family 4 (anion exchanger), member 1, adaptor protein | CGAP-C-2445321 |
SNPs | Gene Info |
| Hs.350927 | SLC25A6 | Solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 | CGAP-C-2460109 CGAP-C-2460112 CGAP-C-2460150 CGAP-C-2460156 CGAP-C-2460163 CGAP-C-2460167 CGAP-C-2460170 CGAP-C-2460171 CGAP-C-2460172 |
SNPs | Gene Info |
| Hs.174021 | - | Transcribed locus | CGAP-C-2391416 |
SNPs | Gene Info |
| Hs.237506 | DNAJB5 | DnaJ (Hsp40) homolog, subfamily B, member 5 | CGAP-C-2428287 CGAP-C-2428288 |
SNPs | Gene Info |
| Hs.493668 | NDUFB6 | NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa | CGAP-C-2478882 CGAP-C-2478883 |
SNPs | Gene Info |
| Hs.20158 | APTX | Aprataxin | CGAP-C-2483267 CGAP-C-2483268 |
SNPs | Gene Info |
| Hs.567229 | ACO1 | Aconitase 1, soluble | CGAP-C-2396959 CGAP-C-2396960 CGAP-C-2396961 CGAP-C-2396962 |
SNPs | Gene Info |
| Hs.272011 | B4GALT1 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 | CGAP-C-2389283 |
SNPs | Gene Info |
| Hs.715113 | - | Transcribed locus, strongly similar to XP_531236.1 PREDICTED: hypothetical protein [Pan troglodytes] | CGAP-C-2389280 |
SNPs | Gene Info |
| Hs.234642 | AQP3 | Aquaporin 3 (Gill blood group) | CGAP-C-2461761 |
SNPs | Gene Info |
| Hs.268963 | UBAP1 | Ubiquitin associated protein 1 | CGAP-C-2442988 |
SNPs | Gene Info |
| Hs.377484 | BAG1 | BCL2-associated athanogene | CGAP-C-2399095 CGAP-C-2399097 CGAP-C-2399098 |
SNPs | Gene Info |
| Hs.643648 | - | Transcribed locus, strongly similar to NP_060281.2 ubiquitin-conjugating enzyme UBC3B [Homo sapiens] | CGAP-C-2398375 |
SNPs | Gene Info |
| Hs.715561 | UBE2R2 | Ubiquitin-conjugating enzyme E2R 2 | CGAP-C-2398383 CGAP-C-2398387 CGAP-C-2398388 CGAP-C-2398391 |
SNPs | Gene Info |
| Hs.493739 | UBAP2 | Ubiquitin associated protein 2 | CGAP-C-2401691 |
SNPs | Gene Info |
| Hs.493709 | NOL6 | Nucleolar protein family 6 (RNA-associated) | CGAP-C-2394365 CGAP-C-2394369 |
SNPs | Gene Info |
| Hs.493750 | WDR40A | WD repeat domain 40A | CGAP-C-2418062 CGAP-C-2418065 CGAP-C-2418073 CGAP-C-2418074 CGAP-C-2418077 |
SNPs | Gene Info |
| Hs.493767 | NUDT2 | Nudix (nucleoside diphosphate linked moiety X)-type motif 2 | CGAP-C-2423043 CGAP-C-2423044 |
SNPs | Gene Info |
| Hs.655456 | - | Transcribed locus | CGAP-C-2448261 |
SNPs | Gene Info |
| Hs.522087 | OPRS1 | Opioid receptor, sigma 1 | CGAP-C-2475463 CGAP-C-2475464 |
SNPs | Gene Info |
| Hs.112667 | DNAI1 | Dynein, axonemal, intermediate chain 1 | CGAP-C-2422634 |
SNPs | Gene Info |
| Hs.493771 | C9orf25 | Chromosome 9 open reading frame 25 | CGAP-C-2481881 |
SNPs | Gene Info |
| Hs.493791 | UNC13B | Unc-13 homolog B (C. elegans) | CGAP-C-2488690 |
SNPs | Gene Info |
| Hs.115460 | CCIN | Calicin | CGAP-C-2429275 |
SNPs | Gene Info |
| Hs.443134 | GBA2 | Glucosidase, beta (bile acid) 2 | CGAP-C-2426312 CGAP-C-2426315 |
SNPs | Gene Info |
| Hs.529782 | VCP | Valosin-containing protein | CGAP-C-2482722 |
SNPs | Gene Info |
| Hs.522114 | CLTA | Clathrin, light chain (Lca) | CGAP-C-2452535 CGAP-C-2452536 CGAP-C-2452537 CGAP-C-2452538 CGAP-C-2452539 CGAP-C-2452544 |
SNPs | Gene Info |
| Hs.12509 | LOC92973 | Hypothetical LOC92973 | CGAP-C-2393979 |
SNPs | Gene Info |
| Hs.301696 | KIAA1539 | KIAA1539 | CGAP-C-2399651 CGAP-C-2399653 |
SNPs | Gene Info |
| Hs.161276 | ZBTB5 | Zinc finger and BTB domain containing 5 | CGAP-C-2444328 CGAP-C-2444329 |
SNPs | Gene Info |
| Hs.446271 | LOC401504 | Hypothetical gene supported by AK091718 | CGAP-C-2481725 CGAP-C-2481726 CGAP-C-2481729 |
SNPs | Gene Info |
| Hs.3439 | STOML2 | Stomatin (EPB72)-like 2 | CGAP-C-2401466 CGAP-C-2401477 CGAP-C-2401479 |
SNPs | Gene Info |
| Hs.644630 | ANKRD18A | Ankyrin repeat domain 18A | CGAP-C-2398035 |
SNPs | Gene Info |
| Hs.522110 | CREB3 | CAMP responsive element binding protein 3 | CGAP-C-2451585 |
SNPs | Gene Info |
| Hs.436219 | ALDH1B1 | Aldehyde dehydrogenase 1 family, member B1 | CGAP-C-2407922 CGAP-C-2407923 CGAP-C-2407925 CGAP-C-2407927 CGAP-C-2407928 CGAP-C-2407929 |
SNPs | Gene Info |
| Hs.709527 | FBXO10 | F-box protein 10 | CGAP-C-2434709 |
SNPs | Gene Info |
| Hs.654700 | ZCCHC7 | Zinc finger, CCHC domain containing 7 | CGAP-C-2456807 CGAP-C-2456810 CGAP-C-2456811 |
SNPs | Gene Info |
| Hs.349705 | IGFBPL1 | Insulin-like growth factor binding protein-like 1 | CGAP-C-2430249 |
SNPs | Gene Info |
| Hs.130774 | TOMM5 | Translocase of outer mitochondrial membrane 5 homolog (yeast) | CGAP-C-2434702 CGAP-C-2434703 CGAP-C-2434704 CGAP-C-2434705 CGAP-C-2434706 CGAP-C-2434707 CGAP-C-2434710 |
SNPs | Gene Info |
| Hs.594122 | - | Transcribed locus, moderately similar to NP_065995.1 bile acid beta-glucosidase [Homo sapiens] | CGAP-C-2426314 |
SNPs | Gene Info |
| Hs.655589 | - | CDNA clone IMAGE:5500261 | CGAP-C-2435713 CGAP-C-2435714 |
SNPs | Gene Info |
| Hs.521482 | SHB | Src homology 2 domain containing adaptor protein B | CGAP-C-2482579 CGAP-C-2482580 |
SNPs | Gene Info |
| Hs.522085 | C9orf165 | Chromosome 9 open reading frame 165 | CGAP-C-2449344 |
SNPs | Gene Info |
| Hs.63287 | CA9 | Carbonic anhydrase IX | CGAP-C-2475351 |
SNPs | Gene Info |
| Hs.256747 | SPAG8 | Sperm associated antigen 8 | CGAP-C-2467168 |
SNPs | Gene Info |
| Hs.522099 | PIGO | Phosphatidylinositol glycan anchor biosynthesis, class O | CGAP-C-2456356 CGAP-C-2456357 |
SNPs | Gene Info |
| Hs.493819 | GLIPR2 | GLI pathogenesis-related 2 | CGAP-C-2408382 |
SNPs | Gene Info |
| Hs.493796 | RUSC2 | RUN and SH3 domain containing 2 | CGAP-C-2399592 |
SNPs | Gene Info |
| Hs.50382 | TJP2 | Tight junction protein 2 (zona occludens 2) | CGAP-C-2482248 CGAP-C-2482249 |
SNPs | Gene Info |
| Hs.534371 | PIP5K1B | Phosphatidylinositol-4-phosphate 5-kinase, type I, beta | CGAP-C-2481987 |
SNPs | Gene Info |
| Hs.171939 | APBA1 | Amyloid beta (A4) precursor protein-binding, family A, member 1 | CGAP-C-2402212 |
SNPs | Gene Info |
| Hs.29978 | FXN | Frataxin | CGAP-C-2455487 |
SNPs | Gene Info |
| Comments, questions and suggestions to: Bob Clifford ( clifforr@mail.nih.gov ) |