RIKEN cDNA B230339M05 gene (B230339M05Rik)

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Finding cDNAs

UGID:2008799 UniGene Mm.398185 Mus musculus (mouse) B230339M05Rik

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RIKEN cDNA B230339M05 gene (B230339M05Rik)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_808326.2	hypothetical protein LOC228850	M. musculus	100.0	1490
NP_065069.1	hypothetical protein LOC57148	H. sapiens	98.7	1493
NP_001138184.1	CG34408, isoform D	D. melanogaster	49.2	1467
NP_193070.1	leucine-rich repeat family protein / extensin family protein	A. thaliana	48.1	312
XP_001695130.1	cell wall protein pherophorin-C10	C. reinhardtii	47.1	306

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; embryonic tissue; mixed; spleen; eye; bone marrow; mammary gland; pancreas; skin; extraembryonic tissue; thymus; uncharacterized tissue; pineal gland; spinal cord; bladder; bone; lung; uterus; ovary; muscle; liver; prostate; kidney; inner ear; sympathetic ganglion

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	2
Map position:	2 H1
UniSTS entry:	Chr 2	AI507211
UniSTS entry:	Chr Y	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK083733.1	Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030073C20 product:hypothetical protein, full insert sequence	P
AK047718.1	Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030017D11 product:hypothetical protein, full insert sequence	P
AK046067.1	Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230339M05 product:hypothetical protein, full insert sequence	P
AK050015.1	Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730002H08 product:unclassifiable, full insert sequence
AK034451.1	Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330195P16 product:unclassifiable, full insert sequence
AK122470.1	Mus musculus mRNA for mKIAA1219 protein	P
NM_177658.3	Mus musculus RIKEN cDNA B230339M05 gene (B230339M05Rik), mRNA	P
BC138377.1	Mus musculus RIKEN cDNA B230339M05 gene, mRNA (cDNA clone MGC:170002 IMAGE:8861397), complete cds	P
BC145260.1	Mus musculus cDNA clone IMAGE:9053813, containing frame-shift errors	P

EST sequences (10 of 187) [Show all sequences]

CA566876.1	Clone NIA:K0407A05_IMAGE:30059716	bone marrow	5' read	P
CA571074.1	Clone NIA:K0515E02_IMAGE:30065329	bone marrow	5' read	P
CA571081.1	Clone NIA:K0515E10_IMAGE:30065337	bone marrow	5' read	P
CA571495.1	Clone NIA:K0520H06_IMAGE:30065849	bone marrow	5' read	P
BY095399.1	Clone K630105N11	embryonic tissue	5' read
BY097577.1	Clone K630117I02	extraembryonic tissue	5' read
BY270532.1	Clone K430040M14	brain	5' read
BY270569.1	Clone K430041A12	brain	5' read
BY275776.1	Clone K430315H11	brain	5' read
BY460126.1	Clone K630117I02	extraembryonic tissue	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria