1: ligD ATP-dependent DNA ligase [ Pseudomonas aeruginosa PAO1 ]
GeneID: 880451 updated 21-Dec-2008
[Top][Help]Genomic regions, transcripts, and products
[Top][Help]General protein information- Names
- ATP-dependent DNA ligase
- NP_250828.1
- catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA
- EC 6.5.1.1
[Top][Help]NCBI Reference Sequences (RefSeq)Genome Annotation
The following sections contain reference sequences that belong to a specific genome build. Explain This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.
mRNA and Protein(s)
NP_250828.1 ATP-dependent DNA ligase [Pseudomonas aeruginosa PAO1]
- UniProtKB/TrEMBL
- Q9I1X7
- Conserved Domains (4) summary
- cd04862
Location:566–792 Blast Score:840
- PaeLigD_Pol_like; PaeLigD_Pol_like: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non...
- PRK05972
Location:4–840 Blast Score:3218
- ligD; ATP-dependent DNA ligase; Reviewed
- pfam04679
Location:418–484 Blast Score:145
- DNA_ligase_A_C; ATP dependent DNA ligase C terminal region
- cl00624
Location:229–399 Blast Score:238
- DNA_ligase_A_M; ATP dependent DNA ligase domain
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