WU-BLAST 2.0 search of the National Center for Biotechnology Information's NR Protein Database.
BEAUTY post-processing provided by the Human Genome Sequencing Center, Baylor College of Medicine.
BEAUTY Reference:
Worley KC, Culpepper P, Wiese BA, Smith RF. BEAUTY-X: enhanced BLAST searches for DNA queries. Bioinformatics 1998;14(10):890-1. Abstract
Worley KC, Wiese BA, Smith RF. BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results. Genome Res 1995 Sep;5(2):173-84 Abstract
RepeatMasker repeats found in sequence:No Repeats Found.Reference: Gish, Warren (1994-1997). unpublished. Gish, Warren and David J. States (1993). Identification of protein coding regions by database similarity search. Nat. Genet. 3:266-72.Notice: statistical significance is estimated under the assumption that the equivalent of one entire reading frame in the query sequence codes for protein and that significant alignments will involve only coding reading frames.
Query= A05G02_CONSENSUS (604 letters)
Translating both strands of query sequence in all 6 reading framesDatabase: nr 625,274 sequences; 197,782,623 total letters.Observed Numbers of Database Sequences Satisfying Various EXPECTation Thresholds (E parameter values) Histogram units: = 6 Sequences : less than 6 sequences EXPECTation Threshold (E parameter) | V Observed Counts--> 10000 917 317 |==================================================== 6310 600 131 |===================== 3980 469 96 |================ 2510 373 124 |==================== 1580 249 58 |========= 1000 191 46 |======= 631 145 30 |===== 398 115 13 |== 251 102 26 |==== 158 76 7 |= 100 69 10 |= 63.1 59 8 |= 39.8 51 6 |= 25.1 45 9 |= 15.8 36 2 |: >>>>>>>>>>>>>>>>>>>>> Expect = 10.0, Observed = 34 <<<<<<<<<<<<<<<<< 10.0 34 7 |= 6.31 27 9 |= 3.98 18 1 |: 2.51 17 5 |: 1.58 12 2 |: 1.00 10 0 | 0.63 10 1 |: 0.40 9 0 | 0.25 9 1 |: 0.16 8 1 |: 0.10 7 0 | 0.063 7 0 | 0.040 7 1 |: 0.025 6 0 | 0.016 6 0 | 0.010 6 1 |: 0.0063 5 1 |: Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N gi|10176916|dbj|BAB10160.1|(AB016880) GCN4-complement... +2 316 1.6e-46 2 gi|11358303|pir||T48577hypothetical protein T31B5.120... +3 297 1.5e-29 2 gi|6465806|emb|CAB61505.1|(AJ130878) GCN4-complementi... +2 178 1.2e-20 2 gi|12323799|gb|AAG51867.1|AC079675_2(AC079675) GCN4-c... +2 170 6.6e-20 2 gi|1931654|gb|AAB65489.1|(U95973) BRCA1-associated RI... +1 112 0.0052 1 gi|4506965ref|NP_003717.1| src kinase-associated phos... +2 89 0.0068 2 gi|386012|gb|AAB26832.1|rac protein kinase/racPPK [Dr... +2 83 0.030 1 gi|1079127|pir||A55888protein kinase RAC (EC 2.7.1.-)... +2 100 0.13 2 gi|10764776|gb|AAG22816.1|AF302149_1(AF302149) tandem... +2 88 0.19 2 gi|10198132|gb|AAG15201.1|(AF286164) Tandem PH Domain... +2 92 0.40 1 gi|11425774ref|XP_008341.1| KIAA0050 gene product [Ho... +2 72 0.69 2 gi|3183205|sp|Q15057|Y041_HUMANHYPOTHETICAL PROTEIN K... +2 70 0.69 2 gi|12697977|dbj|BAB21807.1|(AB051503) KIAA1716 protei... +2 69 0.80 2 gi|398924|emb|CAA81204.1|(Z26242) Dakt1 serine-threon... +2 89 0.86 2 gi|603542|emb|CAA58500.1|(X83510) RAC protein kinase ... +2 89 0.86 2 gi|4688902|emb|CAB41450.1|(AJ238248) centaurin beta2 ... +2 69 0.91 2 gi|7661880ref|NP_055531.1| KIAA0050 gene product [Hom... +2 72 0.92 2 gi|7300962|gb|AAF56100.1|(AE003742) cenB1A gene produ... +1 72 0.96 2 gi|12711698ref|NP_075415.1| nuclear GTPase PIKE [Ratt... +2 89 0.98 1 gi|2209291|gb|AAC39522.1|(U81031) KIAA0167 [Homo sapi... +2 89 0.99 1 gi|7661962ref|NP_055585.1| KIAA0167 gene product [Hom... +2 89 0.99 1 gi|12737243ref|XP_006668.2| KIAA0167 gene product [Ho... +2 89 0.99 1 gi|1669492|gb|AAB18907.1|(U55232) guanine nucleotide-... +2 66 0.992 1 gi|11545749ref|NP_071330.1| differentially expressed ... +2 87 0.996 1 gi|10198126|gb|AAG15198.1|AF286161_1(AF286161) Tandem... +2 85 0.996 1 gi|4225946|emb|CAA10735.1|(AJ132699) centaurin beta 1... +2 80 0.998 2 gi|6687775|emb|CAB65622.1|(Z97832) dJ329A5.3 (KIAA064... +2 87 0.998 1 gi|10175211|dbj|BAB06309.1|(AP001516) BH2590~unknown ... +2 79 0.999 1 gi|6434439|emb|CAA19462.2|(AL023828) contains similar... +2 79 0.9996 2 gi|7509429|pir||T26508hypothetical protein Y17G7B.15 ... +2 79 0.9997 2 gi|7437057|pir||B72364fumarate hydratase, C-terminal ... +2 77 0.9998 1 gi|466174|sp|P33989|YRPM_ACICAHYPOTHETICAL 9.2 KD PRO... -3 61 0.9998 1 gi|7504893|pir||T23070hypothetical protein H12D21.3 -... +2 61 0.9998 1 gi|4225944|emb|CAA10734.1|(AJ132698) centaurin beta 1... +2 79 0.99995 2 Locally-aligned regions (HSPs) with respect to query sequence: Locus_ID Frame 3 Hits gi|10176916 | _________________________ gi|11358303 | _______________________________ gi|6465806 | ______________________ gi|12323799 | _______________ gi|1931654 | ______________________ gi|4506965 | ____________ gi|1079127 | _______________ gi|10764776 | ___________ gi|398924 | _______________ gi|603542 | _______________ __________________________________________________ Query sequence: | | | | || 202 0 50 100 150 200 Locus_ID Frame 2 Hits gi|10176916 |_______________________ gi|11358303 |________________ gi|6465806 |________________________ gi|12323799 |________________________ gi|4506965 | ______________ gi|386012 | ____________ gi|1079127 |_______________________ gi|10764776 | _________________ gi|10198132 | ____________________ gi|11425774 | ___________ gi|3183205 | _________ gi|12697977 | _________ gi|398924 | _____________ gi|603542 | _____________ gi|4688902 | _________ gi|7661880 | ___________ gi|7300962 | ____________ gi|12711698 | ______________ gi|2209291 | ______________ gi|7661962 | ______________ gi|12737243 | ______________ gi|1669492 | ___________ gi|11545749 | ___________________ gi|10198126 | ____________________ gi|4225946 | ______________ gi|6687775 | ___________________ gi|10175211 | _________________ gi|6434439 | _________ gi|7509429 | _________ gi|7437057 | ____________________ gi|7504893 | _____ gi|4225944 | _________ __________________________________________________ Query sequence: | | | | || 202 0 50 100 150 200 Locus_ID Frame 1 Hits gi|11358303 | _________ gi|6465806 | _____________ gi|12323799 | _________ gi|1931654 | _____________ gi|11425774 | _________ gi|3183205 | _________ gi|12697977 | ____________ gi|4688902 | _________ gi|7661880 | _________ gi|7300962 | ______ gi|4225946 | _____________ gi|6434439 | _____________ gi|7509429 | _____________ gi|4225944 | _____________ Prosite Hits: ____ __________________________________________________ Query sequence: | | | | || 202 0 50 100 150 200 __________________ Prosite hits: PROKAR_LIPOPROTEIN Prokaryotic membrane lipoprotein lipid a 182..192 __________________ Locus_ID Frame -3 Hits gi|466174 | _____________ __________________________________________________ Query sequence: | | | | || 202 0 50 100 150 200
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>gi|10176916|dbj|BAB10160.1| (AB016880) GCN4-complementing protein homolog [Arabidopsis thaliana] Length = 768 Frame 3 hits (HSPs): _______ Frame 2 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | | 768 0 150 300 450 600 750 Plus Strand HSPs: Score = 316 (111.2 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46 Identities = 65/92 (70%), Positives = 75/92 (81%), Frame = +2 Query: 2 IDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLR 181 +DRE+R S SP GDG++ R+S K+IEAVMQSAAKGKVQTIRQGYLSKRSSNLR Sbjct: 215 VDRETR----NSCVSPTGDGMRHNSRNSQKVIEAVMQSAAKGKVQTIRQGYLSKRSSNLR 270 Query: 182 GDWKRRFFVLDSRGMLYYYRKQCSKSSGSSXQ 277 GDWKRRFF+LDSRGMLYYYRK + SSG+ + Sbjct: 271 GDWKRRFFILDSRGMLYYYRKPWNWSSGNGSR 302 Score = 217 (76.4 bits), Expect = 1.6e-46, Sum P(2) = 1.6e-46 Identities = 54/97 (55%), Positives = 66/97 (68%), Frame = +3 Query: 297 SSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVKL--AYINN*SRC*PIRF--EVLLPDH- 461 +SE GLLSRWLSSH+HGGVHDEK VA HTV L + I + +RF ++ P Sbjct: 310 ASENSPGLLSRWLSSHYHGGVHDEKPVARHTVNLLTSTIKVDADQTDLRFCFRIISPTKV 369 Query: 462 FTYKELHFAXSALDQMDWIEKITGVIASLLSSXIPDRMLPA 584 +T + A +A DQMDWIEKITGVIASLLS P+R + A Sbjct: 370 YTLQ----AENAQDQMDWIEKITGVIASLLSFQTPERAIMA 406 >gi|11358303|pir||T48577 hypothetical protein T31B5.120 - Arabidopsis thaliana >gi|7529285|emb|CAB86637.1| (AL163491) putative protein [Arabidopsis thaliana] Length = 750 Frame 3 hits (HSPs): _________ Frame 2 hits (HSPs): _____ Frame 1 hits (HSPs): ___ __________________________________________________ Database sequence: | | | | | | 750 0 150 300 450 600 Plus Strand HSPs: Score = 297 (104.5 bits), Expect = 2.6e-24, P = 2.6e-24 Identities = 73/124 (58%), Positives = 86/124 (69%), Frame = +3 Query: 240 VNSAANHLGLVXNILAXGNSSELGSGLLSRWLSS--HHHGGVHDEKSVAHHTVKL--AYI 407 + SAA G + NSSELGSGLLSRWLSS H HGGVHDEKSVA HTV L + I Sbjct: 250 MQSAARGKGSGSQLSGQRNSSELGSGLLSRWLSSNNHGHGGVHDEKSVARHTVNLLTSTI 309 Query: 408 NN*SRC*PIRF--EVLLPD-HFTYKELHFAXSALDQMDWIEKITGVIASLLSSXIPDRML 578 + +RF ++ P ++T + A SALDQMDWIEKITGVIASLLSS +P++ L Sbjct: 310 KVDADQSDLRFCFRIISPTKNYTLQ----AESALDQMDWIEKITGVIASLLSSQVPEQRL 365 Query: 579 PASPMGSG 602 P SPMGSG Sbjct: 366 PGSPMGSG 373 Score = 211 (74.3 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29 Identities = 45/66 (68%), Positives = 49/66 (74%), Frame = +2 Query: 2 IDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGK---VQTIRQGYLSKRSS 172 +DRESRW SNGSNGSPNGDGIQAIGRSSHKMI+AVMQSAA+GK Q Q S+ S Sbjct: 215 VDRESRWGSNGSNGSPNGDGIQAIGRSSHKMIDAVMQSAARGKGSGSQLSGQRNSSELGS 274 Query: 173 NLRGDW 190 L W Sbjct: 275 GLLSRW 280 Score = 163 (57.4 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29 Identities = 32/32 (100%), Positives = 32/32 (100%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ Sbjct: 303 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 334 >gi|6465806|emb|CAB61505.1| (AJ130878) GCN4-complementing protein (GCP1) [Arabidopsis thaliana] Length = 775 Frame 3 hits (HSPs): _______ Frame 2 hits (HSPs): ______ Frame 1 hits (HSPs): _____ __________________________________________________ Database sequence: | | | | | | | 775 0 150 300 450 600 750 Plus Strand HSPs: Score = 178 (62.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20 Identities = 43/95 (45%), Positives = 60/95 (63%), Frame = +2 Query: 2 IDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLR 181 +D + A+ S+G+ NG+ + G +K E + +A K + I+QGYL KRSS+LR Sbjct: 251 LDSQQLVANAESSGA-NGNRVG--GNIPYKNTETSL-TADK---EVIKQGYLLKRSSSLR 303 Query: 182 GDWKRRFFVLDSRGMLYYYRKQCSKSSGSSXQHSG 286 DWKR+FFVLDS G +YYYR +KS GS +SG Sbjct: 304 TDWKRKFFVLDSHGSMYYYRTNGNKSMGSHHHYSG 338 Score = 112 (39.4 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20 Identities = 26/55 (47%), Positives = 34/55 (61%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQXVRWTK---WIG-LKKSLVLLLH 546 +L TS IK+DA+ DLR CFRIISP K YTLQ W+ + K++ LL+ Sbjct: 371 DLRTSLIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITKAIGTLLN 425 Score = 93 (32.7 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18 Identities = 29/88 (32%), Positives = 49/88 (55%), Frame = +3 Query: 297 SSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVKL--AYINN*SRC*PIR--FEVLLPDHF 464 SS+ +G+ R+ + H+ G E S+ ++T+ L + I + +R F ++ P Sbjct: 339 SSDHNTGVFGRFRARHNRSGSLTEGSLGYNTIDLRTSLIKLDAEDMDLRLCFRIISPQK- 397 Query: 465 TYKELHFAXSALDQMDWIEKITGVIASLLSS 557 TY L A + D+MDW+ KIT I +LL+S Sbjct: 398 TYT-LQ-AENGADRMDWVNKITKAIGTLLNS 426 >gi|12323799|gb|AAG51867.1|AC079675_2 (AC079675) GCN4-complementing protein, putative; 3111-9506 [Arabidopsis thaliana] Length = 776 Frame 3 hits (HSPs): ____ Frame 2 hits (HSPs): ______ Frame 1 hits (HSPs): ___ __________________________________________________ Database sequence: | | | | | | | 776 0 150 300 450 600 750 Plus Strand HSPs: Score = 170 (59.8 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20 Identities = 42/92 (45%), Positives = 57/92 (61%), Frame = +2 Query: 11 ESRWASNGSNGSPNGDGIQAIGRS-SHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGD 187 +S+ AS + P+ G + R+ K +EA S A +V +QGYL KRS++LR D Sbjct: 252 DSQQAS--AKADPSDVGGNHVYRAIPRKNVEANSVSTADKEVT--KQGYLLKRSASLRAD 307 Query: 188 WKRRFFVLDSRGMLYYYRKQCSKSSGSSXQHSG 286 WKRRFFVLD+ G LYYYR +KS+ S +SG Sbjct: 308 WKRRFFVLDNHGSLYYYRNTGNKSAKSQHYYSG 340 Score = 113 (39.8 bits), Expect = 6.6e-20, Sum P(2) = 6.6e-20 Identities = 22/32 (68%), Positives = 26/32 (81%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 +L TS IK+DA+ +DLR CFRIISP K YTLQ Sbjct: 371 DLRTSLIKLDAEDTDLRLCFRIISPQKTYTLQ 402 Score = 63 (22.2 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14 Identities = 21/56 (37%), Positives = 27/56 (48%), Frame = +3 Query: 438 FEVLLPDHFTYKELHFAXSALDQMDWIEKITGVIASLLSSXI----PDRMLPASPMGSG 602 F ++ P TY L A + D+MDW+ KIT I L+S P R L SG Sbjct: 390 FRIISPQK-TYT-LQ-AENGADRMDWVNKITAAITIRLNSHFLQQSPARYLDKKNTSSG 445 >gi|1931654|gb|AAB65489.1| (U95973) BRCA1-associated RING domain protein isolog; 106935-111081 [Arabidopsis thaliana] Length = 531 Frame 3 hits (HSPs): __________ Frame 1 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | 531 0 150 300 450 Plus Strand HSPs: Score = 112 (39.4 bits), Expect = 0.0052, P = 0.0052 Identities = 26/55 (47%), Positives = 34/55 (61%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQXVRWTK---WIG-LKKSLVLLLH 546 +L TS IK+DA+ DLR CFRIISP K YTLQ W+ + K++ LL+ Sbjct: 127 DLRTSLIKLDAEDMDLRLCFRIISPQKTYTLQAENGADRMDWVNKITKAIGTLLN 181 Score = 93 (32.7 bits), Expect = 0.87, P = 0.58 Identities = 29/88 (32%), Positives = 49/88 (55%), Frame = +3 Query: 297 SSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVKL--AYINN*SRC*PIR--FEVLLPDHF 464 SS+ +G+ R+ + H+ G E S+ ++T+ L + I + +R F ++ P Sbjct: 95 SSDHNTGVFGRFRARHNRSGSLTEGSLGYNTIDLRTSLIKLDAEDMDLRLCFRIISPQK- 153 Query: 465 TYKELHFAXSALDQMDWIEKITGVIASLLSS 557 TY L A + D+MDW+ KIT I +LL+S Sbjct: 154 TYT-LQ-AENGADRMDWVNKITKAIGTLLNS 182 >gi|4506965 ref|NP_003717.1| src kinase-associated phosphoprotein of 55 kDa [Homo sapiens] >gi|2252496|emb|CAA72101.1| (Y11215) SKAP55 [Homo sapiens] Length = 359 Frame 3 hits (HSPs): _______ Frame 2 hits (HSPs): ________ __________________________________________________ Database sequence: | | | | 359 0 150 300 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.0068, Sum P(2) = 0.0068 Identities = 21/55 (38%), Positives = 33/55 (60%), Frame = +2 Query: 107 MQSAAKGKVQ---TIRQGYLSKRSSN---LRGDWKRRFFVLDSRGMLYYYRKQCSK 256 M+ KG + I+QGYL K+S + +W++R+ V+ SRG+ YYY + SK Sbjct: 95 MEDIVKGAQELDNVIKQGYLEKKSKDHSFFGSEWQKRWCVV-SRGLFYYYANEKSK 149 Score = 58 (20.4 bits), Expect = 0.0068, Sum P(2) = 0.0068 Identities = 14/43 (32%), Positives = 23/43 (53%), Frame = +3 Query: 438 FEVLLPDHFTYKELHFAXSALDQMDWIEKITGVIASLLSSXIP 566 FE+ D TY+ A S + DW+++I+ ++ L S IP Sbjct: 178 FELTSQDRRTYE--FTATSPAEARDWVDQISFLLKDLSSLTIP 218 >gi|386012|gb|AAB26832.1| rac protein kinase/racPPK [Drosophila, Peptide Partial, 102 aa] Length = 102 Frame 2 hits (HSPs): _____________________ __________________________________________________ Database sequence: | | | | | | | 102 0 20 40 60 80 100 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 0.030, P = 0.030 Identities = 15/43 (34%), Positives = 30/43 (69%), Frame = +2 Query: 140 IRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGS 268 +++G+L KR +++ +W++R+FVL S G L YR + + S+ + Sbjct: 1 VKEGWLMKRGEHIK-NWRQRYFVLHSDGRLMGYRSKPADSAST 42 >gi|1079127|pir||A55888 protein kinase RAC (EC 2.7.1.-) - fruit fly (Drosophila melanogaster) >gi|7768130|emb|CAA58499.2| (X83510) RAC protein kinase DRAC-PK85 [Drosophila melanogaster] Length = 611 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): ________ Annotated Domains: _________________________________________ __________________________________________________ Database sequence: | | | | || 611 0 150 300 450 600 __________________ Annotated Domains: DOMO DM04004: PLECKSTRINREPEAT 102..265 DOMO DM00004: PROTEINKINASEDOMAIN 267..507 DOMO DM00087: SERINE/THREONINEPROTEINKINASES 509..589 Entrez domain: pleckstrin repeat homology #labe 105..209 Entrez domain: protein kinase homology #label K 264..523 PROSITE PROTEIN_KINASE_ST: Serine/Threonine prot 385..397 __________________ Plus Strand HSPs: Score = 100 (35.2 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 23/86 (26%), Positives = 44/86 (51%), Frame = +2 Query: 11 ESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQS-AAKGKVQTIRQGYLSKRSSNLRGD 187 + W S S + G +I + +V A + Q +++G+L KR +++ + Sbjct: 64 QQSWPSRTSTAPTHDSGTMSINTTFDLSSPSVTSGHALTEQTQVVKEGWLMKRGEHIK-N 122 Query: 188 WKRRFFVLDSRGMLYYYRKQCSKSSGS 268 W++R+FVL S G L YR + + S+ + Sbjct: 123 WRQRYFVLHSDGRLMGYRSKPADSAST 149 Score = 38 (13.4 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 17/56 (30%), Positives = 23/56 (41%), Frame = +3 Query: 387 TVKLAYINN*SRC*PIRFEVLLPDHFTYKELHFAX-SALDQMDWIEKITGVIASLL 551 TV+ I R P F + T E FA S L++ W E I V + L+ Sbjct: 159 TVRGCQIMTVDRPKPFTFIIRGLQWTTVIERTFAVESELERQQWTEAIRNVSSRLI 214 >gi|10764776|gb|AAG22816.1|AF302149_1 (AF302149) tandem PH domain-containing protein-2 [Gallus gallus] Length = 410 Frame 3 hits (HSPs): _____ Frame 2 hits (HSPs): _________ __________________________________________________ Database sequence: | | | | 410 0 150 300 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.22, Sum P(2) = 0.19 Identities = 23/70 (32%), Positives = 36/70 (51%), Frame = +2 Query: 53 GDGIQAIGRSSHKMIEA----VMQSAAKGKV--QTIRQGYLSKRSSNLRGDWKRRFFVLD 214 GDG + ++H ++ + SA K I+ G+ K+ N+R WKRR+FVLD Sbjct: 167 GDGAEGSDPTAHPLLRRSQSYIPTSATKPPAGPPAIKSGFCVKQG-NVRKSWKRRYFVLD 225 Query: 215 SRGMLYYYRKQ 247 + YY +Q Sbjct: 226 EFSISYYKCEQ 236 Score = 46 (16.2 bits), Expect = 0.22, Sum P(2) = 0.19 Identities = 12/37 (32%), Positives = 17/37 (45%), Frame = +3 Query: 438 FEVLLPDHFTYKELHFAXSALDQMDWIEKITGVIASL 548 FE++ Y + A S D WI ITG + +L Sbjct: 269 FEIITSSRTFYIQ---ADSPEDMHSWIRAITGAVQAL 302 >gi|10198132|gb|AAG15201.1| (AF286164) Tandem PH Domain Containing Protein-2 [Homo sapiens] Length = 304 Frame 2 hits (HSPs): _____________ __________________________________________________ Database sequence: | | | | | | || 304 0 50 100 150 200 250 300 Plus Strand HSPs: Score = 92 (32.4 bits), Expect = 0.51, P = 0.40 Identities = 26/75 (34%), Positives = 36/75 (48%), Frame = +2 Query: 23 ASNGSNGSPNGD-GIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRR 199 + NG +G + G I R S I A+ G I+ GY K+ N+R WKRR Sbjct: 161 SQNGGDGQEGSEPGSHTILRRSQSYIPTSGCRASTGP-PLIKSGYCVKQG-NVRKSWKRR 218 Query: 200 FFVLDSRGMLYYYRKQ 247 FF LD + Y+ +Q Sbjct: 219 FFALDDFTICYFKCEQ 234 >gi|11425774 ref|XP_008341.1| KIAA0050 gene product [Homo sapiens] >gi|12740314 ref|XP_012625.1| KIAA0050 gene product [Homo sapiens] Length = 531 Frame 2 hits (HSPs): _____ Frame 1 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | 531 0 150 300 450 Plus Strand HSPs: Score = 72 (25.3 bits), Expect = 1.2, Sum P(2) = 0.69 Identities = 14/40 (35%), Positives = 23/40 (57%), Frame = +2 Query: 113 SAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLY 232 S +G + +G+L KR+SN W RR+F + S ++Y Sbjct: 49 SLREGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVY 88 Score = 60 (21.1 bits), Expect = 1.2, Sum P(2) = 0.69 Identities = 13/32 (40%), Positives = 21/32 (65%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 +L T+K+ D S+ RFCF ++S +K+ LQ Sbjct: 102 DLRLCTVKLCPD-SERRFCFEVVSTSKSCLLQ 132 >gi|3183205|sp|Q15057|Y041_HUMAN HYPOTHETICAL PROTEIN KIAA0041 >gi|436228|dbj|BAA05064.1| (D26069) KIAA0041 [Homo sapiens] Length = 632 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): ___ Annotated Domains: ________ ___________ ______ __________________________________________________ Database sequence: | | | | | | 632 0 150 300 450 600 __________________ Annotated Domains: Entrez Domain: PH. 120..215 Entrez Zinc finger region: C4-TYPE. 268..291 PFAM PH: PH domain 121..215 PFAM ArfGap: Putative GTP-ase activating prot 253..374 PFAM ank: Ank repeat 494..526 PFAM ank: Ank repeat 527..559 __________________ Plus Strand HSPs: Score = 70 (24.6 bits), Expect = 1.2, Sum P(2) = 0.69 Identities = 12/31 (38%), Positives = 20/31 (64%), Frame = +2 Query: 140 IRQGYLSKRSSNLRGDWKRRFFVLDSRGMLY 232 + +GYL KR+SN W RR+F + + ++Y Sbjct: 122 VMEGYLFKRASNAFKTWNRRWFSIQNNQLVY 152 Score = 64 (22.5 bits), Expect = 1.2, Sum P(2) = 0.69 Identities = 13/32 (40%), Positives = 20/32 (62%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 +L T+K + + RFCF ++SPTK+ LQ Sbjct: 166 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQ 196 >gi|12697977|dbj|BAB21807.1| (AB051503) KIAA1716 protein [Homo sapiens] Length = 804 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): ___ __________________________________________________ Database sequence: | | | | | | | 804 0 150 300 450 600 750 Plus Strand HSPs: Score = 69 (24.3 bits), Expect = 1.6, Sum P(2) = 0.80 Identities = 12/31 (38%), Positives = 20/31 (64%), Frame = +2 Query: 140 IRQGYLSKRSSNLRGDWKRRFFVLDSRGMLY 232 + +GYL KR+SN W RR+F + + ++Y Sbjct: 273 VMEGYLFKRASNAFKTWNRRWFSIQNSQLVY 303 Score = 66 (23.2 bits), Expect = 1.6, Sum P(2) = 0.80 Identities = 13/42 (30%), Positives = 26/42 (61%), Frame = +1 Query: 364 MRNLLLITL*NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 +++ L + + +L ++K + + RFCF ++SPTK+ LQ Sbjct: 307 LKDALTVVVDDLRLCSVK-PCEDIERRFCFEVLSPTKSCMLQ 347 >gi|398924|emb|CAA81204.1| (Z26242) Dakt1 serine-threonine protein kinase [Drosophila melanogaster] Length = 530 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): _____ __________________________________________________ Database sequence: | | | | | 530 0 150 300 450 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 2.0, Sum P(2) = 0.86 Identities = 16/47 (34%), Positives = 32/47 (68%), Frame = +2 Query: 128 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGS 268 + Q +++G+L KR +++ +W++R+FVL S G L YR + + S+ + Sbjct: 23 QTQVVKEGWLMKRGEHIK-NWRQRYFVLHSDGRLMGYRSKPADSAST 68 Score = 38 (13.4 bits), Expect = 2.0, Sum P(2) = 0.86 Identities = 17/56 (30%), Positives = 24/56 (42%), Frame = +3 Query: 387 TVKLAYINN*SRC*PIRFEVLLPDHFTYKELHFAX-SALDQMDWIEKITGVIASLL 551 TV+ I R P F + T E FA S L++ +W E I V + L+ Sbjct: 78 TVRGCQIMTVDRPKPFTFIIRGLQWTTVIERTFAVESELERHEWTEAIRNVSSRLI 133 >gi|603542|emb|CAA58500.1| (X83510) RAC protein kinase DRAC-PK66 [Drosophila melanogaster] >gi|7300106|gb|AAF55275.1| (AE003711) Akt1 gene product [alt 2] [Drosophila melanogaster] >gi|7300107|gb|AAF55276.1| (AE003711) Akt1 gene product [alt 1] [Drosophila melanogaster] Length = 530 Frame 3 hits (HSPs): ______ Frame 2 hits (HSPs): _____ __________________________________________________ Database sequence: | | | | | 530 0 150 300 450 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 2.0, Sum P(2) = 0.86 Identities = 16/47 (34%), Positives = 32/47 (68%), Frame = +2 Query: 128 KVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGS 268 + Q +++G+L KR +++ +W++R+FVL S G L YR + + S+ + Sbjct: 23 QTQVVKEGWLMKRGEHIK-NWRQRYFVLHSDGRLMGYRSKPADSAST 68 Score = 38 (13.4 bits), Expect = 2.0, Sum P(2) = 0.86 Identities = 17/56 (30%), Positives = 23/56 (41%), Frame = +3 Query: 387 TVKLAYINN*SRC*PIRFEVLLPDHFTYKELHFAX-SALDQMDWIEKITGVIASLL 551 TV+ I R P F + T E FA S L++ W E I V + L+ Sbjct: 78 TVRGCQIMTVDRPKPFTFIIRGLQWTTVIERTFAVESELERQQWTEAIRNVSSRLI 133 >gi|4688902|emb|CAB41450.1| (AJ238248) centaurin beta2 [Homo sapiens] Length = 778 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): ___ __________________________________________________ Database sequence: | | | | | | | 778 0 150 300 450 600 750 Plus Strand HSPs: Score = 69 (24.3 bits), Expect = 2.4, Sum P(2) = 0.91 Identities = 12/31 (38%), Positives = 20/31 (64%), Frame = +2 Query: 140 IRQGYLSKRSSNLRGDWKRRFFVLDSRGMLY 232 + +GYL KR+SN W RR+F + + ++Y Sbjct: 268 VMEGYLFKRASNAFKTWNRRWFSIQNNQVVY 298 Score = 64 (22.5 bits), Expect = 2.4, Sum P(2) = 0.91 Identities = 13/32 (40%), Positives = 20/32 (62%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 +L T+K + + RFCF ++SPTK+ LQ Sbjct: 312 DLRLCTVK-HCEDIERRFCFEVVSPTKSCMLQ 342 >gi|7661880 ref|NP_055531.1| KIAA0050 gene product [Homo sapiens] >gi|3183210|sp|Q15027|Y050_HUMAN HYPOTHETICAL PROTEIN KIAA0050 >gi|488505|dbj|BAA06418.1| (D30758) similar to HUMORFU (D26069) [Homo sapiens] Length = 740 Frame 2 hits (HSPs): ____ Frame 1 hits (HSPs): ___ __________________________________________________ Database sequence: | | | | | | 740 0 150 300 450 600 Plus Strand HSPs: Score = 72 (25.3 bits), Expect = 2.5, Sum P(2) = 0.92 Identities = 14/40 (35%), Positives = 23/40 (57%), Frame = +2 Query: 113 SAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLY 232 S +G + +G+L KR+SN W RR+F + S ++Y Sbjct: 258 SLREGPGGLVMEGHLFKRASNAFKTWSRRWFTIQSNQLVY 297 Score = 60 (21.1 bits), Expect = 2.5, Sum P(2) = 0.92 Identities = 13/32 (40%), Positives = 21/32 (65%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQ 489 +L T+K+ D S+ RFCF ++S +K+ LQ Sbjct: 311 DLRLCTVKLCPD-SERRFCFEVVSTSKSCLLQ 341 >gi|7300962|gb|AAF56100.1| (AE003742) cenB1A gene product [Drosophila melanogaster] >gi|7595986|gb|AAF64529.1|AF254071_1 (AF254071) centaurin beta 1A [Drosophila melanogaster] Length = 828 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): ___ __________________________________________________ Database sequence: | | | | | | | 828 0 150 300 450 600 750 Plus Strand HSPs: Score = 72 (25.3 bits), Expect = 3.2, Sum P(2) = 0.96 Identities = 12/21 (57%), Positives = 17/21 (80%), Frame = +1 Query: 427 DQSDLRFCFRIISPTKNYTLQ 489 ++ D RFCF +ISPTK++ LQ Sbjct: 314 NEGDRRFCFEVISPTKSHILQ 334 Score = 60 (21.1 bits), Expect = 3.2, Sum P(2) = 0.96 Identities = 15/41 (36%), Positives = 23/41 (56%), Frame = +2 Query: 146 QGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGS 268 +GYL K+ S W RR+F L ++Y RK+ ++ S S Sbjct: 261 EGYLFKKKSKGFKTWCRRWFYLSDNQLVY--RKRSNEDSFS 299 >gi|12711698 ref|NP_075415.1| nuclear GTPase PIKE [Rattus norvegicus] >gi|9716661|gb|AAF97595.1| (AF280816) nuclear GTPase PIKE [Rattus norvegicus] Length = 753 Frame 2 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | || 753 0 150 300 450 600 750 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 4.0, P = 0.98 Identities = 17/54 (31%), Positives = 31/54 (57%), Frame = +2 Query: 80 SSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSN-LRGDWKRRFFVLDSRGMLYYY 238 S + +++ ++ G+ I+Q +L KRS N L +WK+++ L S G L Y+ Sbjct: 652 SEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYH 705 >gi|2209291|gb|AAC39522.1| (U81031) KIAA0167 [Homo sapiens] Length = 833 Frame 2 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | | 833 0 150 300 450 600 750 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 4.5, P = 0.99 Identities = 17/54 (31%), Positives = 31/54 (57%), Frame = +2 Query: 80 SSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSN-LRGDWKRRFFVLDSRGMLYYY 238 S + +++ ++ G+ I+Q +L KRS N L +WK+++ L S G L Y+ Sbjct: 321 SEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYH 374 >gi|7661962 ref|NP_055585.1| KIAA0167 gene product [Homo sapiens] >gi|6176569|sp|Q99490|Y167_HUMAN HYPOTHETICAL PROTEIN KIAA0167 >gi|1531539|dbj|BAA11484.1| (D79989) KIAA0167 protein [Homo sapiens] Length = 836 Frame 2 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | | 836 0 150 300 450 600 750 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 4.5, P = 0.99 Identities = 17/54 (31%), Positives = 31/54 (57%), Frame = +2 Query: 80 SSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSN-LRGDWKRRFFVLDSRGMLYYY 238 S + +++ ++ G+ I+Q +L KRS N L +WK+++ L S G L Y+ Sbjct: 322 SEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYH 375 >gi|12737243 ref|XP_006668.2| KIAA0167 gene product [Homo sapiens] Length = 836 Frame 2 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | | 836 0 150 300 450 600 750 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 4.5, P = 0.99 Identities = 17/54 (31%), Positives = 31/54 (57%), Frame = +2 Query: 80 SSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSN-LRGDWKRRFFVLDSRGMLYYY 238 S + +++ ++ G+ I+Q +L KRS N L +WK+++ L S G L Y+ Sbjct: 322 SEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYH 375 >gi|1669492|gb|AAB18907.1| (U55232) guanine nucleotide-releasing factor 1 [Mus musculus] Length = 92 Frame 2 hits (HSPs): ______________________ __________________________________________________ Database sequence: | | | | | | 92 0 20 40 60 80 Plus Strand HSPs: Score = 66 (23.2 bits), Expect = 4.9, P = 0.99 Identities = 16/41 (39%), Positives = 27/41 (65%), Frame = +2 Query: 143 RQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCS-KSSG 265 R+GYLSKRS++ W+ ++F L + +L+Y+ S + SG Sbjct: 25 RKGYLSKRSAD-NPKWQTKWFGL-LQNLLFYFESDSSPRPSG 64 >gi|11545749 ref|NP_071330.1| differentially expressed in FDCP (mouse homolog) 6 [Homo sapiens] >gi|10178881|emb|CAC08450.1| (AJ276095) Def-6 protein [Homo sapiens] Length = 631 Frame 2 hits (HSPs): _______ __________________________________________________ Database sequence: | | | | | | 631 0 150 300 450 600 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 5.5, P = 1.0 Identities = 22/72 (30%), Positives = 38/72 (52%), Frame = +2 Query: 50 NGDGIQAIGRSSHKM-IEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGM 226 +G ++ +GR + M I V Q + ++QGYL KR +LR +W R+F L + Sbjct: 190 SGRCLRGVGRDTLSMAIHEVYQELIQ---DVLKQGYLWKRG-HLRRNWAERWFQLQPSCL 245 Query: 227 LYYYRKQCSKSSG 265 Y+ ++C + G Sbjct: 246 CYFGSEECKEKRG 258 >gi|10198126|gb|AAG15198.1|AF286161_1 (AF286161) Tandem PH Domain Containing Protein-2 [Mus musculus] Length = 425 Frame 2 hits (HSPs): __________ __________________________________________________ Database sequence: | | | | 425 0 150 300 Plus Strand HSPs: Score = 85 (29.9 bits), Expect = 5.5, P = 1.0 Identities = 25/75 (33%), Positives = 35/75 (46%), Frame = +2 Query: 23 ASNGSNGSPNGD-GIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRR 199 + NG +G + G A R S I + G I+ GY K+ N+R WKRR Sbjct: 161 SQNGGDGQEGCEPGTHAFLRRSQSYIPTSGCRPSTGP-PLIKSGYCVKQG-NVRKSWKRR 218 Query: 200 FFVLDSRGMLYYYRKQ 247 FF LD + Y+ +Q Sbjct: 219 FFALDDFTICYFKCEQ 234 >gi|4225946|emb|CAA10735.1| (AJ132699) centaurin beta 1B [Caenorhabditis elegans] Length = 742 Frame 2 hits (HSPs): _____ Frame 1 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | 742 0 150 300 450 600 Plus Strand HSPs: Score = 80 (28.2 bits), Expect = 6.1, Sum P(2) = 1.0 Identities = 18/55 (32%), Positives = 30/55 (54%), Frame = +2 Query: 80 SSHKMIEAVMQ-SAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYR 241 S +++E + S + + +GYL KRSSN W RR+F + + +LY +R Sbjct: 172 SDSRLMEMFLHPSGMPIEPDVMMEGYLYKRSSNAFKTWNRRWFQIKDKQLLYSHR 226 Score = 47 (16.5 bits), Expect = 6.1, Sum P(2) = 1.0 Identities = 13/54 (24%), Positives = 24/54 (44%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQXVRWT---KWIGLKKSLVLLLH 546 NL ++ D CF +++PT+ + LQ + W+ + +L LH Sbjct: 239 NLRICLVRPAPSNIDRIGCFELVTPTRIHLLQADSESLCQDWMRALQRTILALH 292 >gi|6687775|emb|CAB65622.1| (Z97832) dJ329A5.3 (KIAA06460 protein) [Homo sapiens] Length = 694 Frame 2 hits (HSPs): ______ __________________________________________________ Database sequence: | | | | | | 694 0 150 300 450 600 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 6.2, P = 1.0 Identities = 22/72 (30%), Positives = 38/72 (52%), Frame = +2 Query: 50 NGDGIQAIGRSSHKM-IEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGM 226 +G ++ +GR + M I V Q + ++QGYL KR +LR +W R+F L + Sbjct: 253 SGRCLRGVGRDTLSMAIHEVYQELIQ---DVLKQGYLWKRG-HLRRNWAERWFQLQPSCL 308 Query: 227 LYYYRKQCSKSSG 265 Y+ ++C + G Sbjct: 309 CYFGSEECKEKRG 321 >gi|10175211|dbj|BAB06309.1| (AP001516) BH2590~unknown conserved protein [Bacillus halodurans] Length = 189 Frame 2 hits (HSPs): ___________________ __________________________________________________ Database sequence: | | | | | 189 0 50 100 150 Plus Strand HSPs: Score = 79 (27.8 bits), Expect = 6.9, P = 1.0 Identities = 24/67 (35%), Positives = 34/67 (50%), Frame = +2 Query: 41 GSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGY----LSKRSSNLRGDWKRRFFV 208 G G GI+A+ R +MI Q A ++TI+Q L R+ R D KR V Sbjct: 50 GGSGGLGIEALSRGVERMIFVDQQKRA---IETIKQNLSHCGLEGRAEVYRNDAKRALQV 106 Query: 209 LDSRGMLYYY 238 L RG+++ Y Sbjct: 107 LTKRGIVFAY 116 >gi|6434439|emb|CAA19462.2| (AL023828) contains similarity to Pfam domain: PF00023 (Ank repeat), Score=57.5, E-value=9.1e-14, N=2; PF00169 (PH domain), Score=68.8, E-value=2.5e-18, N=1; PF01412 (Putative GTP-ase activating protein for Arf), Score=158.1, E-value=4.7e-44, N=1~cDNA > Length = 742 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | 742 0 150 300 450 600 Plus Strand HSPs: Score = 79 (27.8 bits), Expect = 7.9, Sum P(2) = 1.0 Identities = 15/32 (46%), Positives = 21/32 (65%), Frame = +2 Query: 146 QGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYR 241 +GYL KRSSN W RR+F + + +LY +R Sbjct: 195 EGYLYKRSSNAFKTWNRRWFQIKDKQLLYSHR 226 Score = 47 (16.5 bits), Expect = 7.9, Sum P(2) = 1.0 Identities = 13/54 (24%), Positives = 24/54 (44%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQXVRWT---KWIGLKKSLVLLLH 546 NL ++ D CF +++PT+ + LQ + W+ + +L LH Sbjct: 239 NLRICLVRPAPSNIDRIGCFELVTPTRIHLLQADSESLCQDWMRALQRTILALH 292 >gi|7509429|pir||T26508 hypothetical protein Y17G7B.15 - Caenorhabditis elegans Length = 752 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): _____ __________________________________________________ Database sequence: | | | | | || 752 0 150 300 450 600 750 Plus Strand HSPs: Score = 79 (27.8 bits), Expect = 8.1, Sum P(2) = 1.0 Identities = 15/32 (46%), Positives = 21/32 (65%), Frame = +2 Query: 146 QGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYR 241 +GYL KRSSN W RR+F + + +LY +R Sbjct: 195 EGYLYKRSSNAFKTWNRRWFQIKDKQLLYSHR 226 Score = 47 (16.5 bits), Expect = 8.1, Sum P(2) = 1.0 Identities = 13/54 (24%), Positives = 24/54 (44%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQXVRWT---KWIGLKKSLVLLLH 546 NL ++ D CF +++PT+ + LQ + W+ + +L LH Sbjct: 239 NLRICLVRPAPSNIDRIGCFELVTPTRIHLLQADSESLCQDWMRALQRTILALH 292 >gi|7437057|pir||B72364 fumarate hydratase, C-terminal subunit - Thermotoga maritima (strain MSB8) >gi|4981055|gb|AAD35626.1|AE001729_6 (AE001729) fumarate hydratase, C-terminal subunit [Thermotoga maritima] Length = 164 Frame 2 hits (HSPs): ________________________ __________________________________________________ Database sequence: | | | | | 164 0 50 100 150 Plus Strand HSPs: Score = 77 (27.1 bits), Expect = 8.4, P = 1.0 Identities = 23/76 (30%), Positives = 38/76 (50%), Frame = +2 Query: 32 GSNGSPNGDGIQAIGRSSHKMIEAVMQSAAK-GKVQTIRQGYLSKRSSNLRGDWKRRFFV 208 G +P+G + AIG ++ ++ ++ K G + TI +G SK++ WKR +FV Sbjct: 52 GPAKTPSGKPVGAIGPTTSARMDDYLEMLFKLGAIATIGKGKRSKKAIEACKKWKRVYFV 111 Query: 209 LDSRGMLYYYRKQCSKS 259 S G K+ KS Sbjct: 112 TPS-GTAAALSKRVKKS 127 >gi|466174|sp|P33989|YRPM_ACICA HYPOTHETICAL 9.2 KD PROTEIN IN RPON-MURA INTERGENIC REGION (ORF3) >gi|415661|gb|AAA21617.1| (L26051) putative; ORF3 [Acinetobacter calcoaceticus] Length = 83 Frame -3 hits (HSPs): ___________________________ Annotated Domains: _________________________________________________ __________________________________________________ Database sequence: | | | | | | 83 0 20 40 60 80 __________________ Annotated Domains: DOMO DM01731: 1..82 PFAM BolA: BolA-like protein 1..75 PRODOM PD004789: BOLA(3) YRBA(2) 1..74 PROSITE RCC1_2: Regulator of chromosome condensa 57..67 __________________ Minus Strand HSPs: Score = 61 (21.5 bits), Expect = 8.7, P = 1.0 Identities = 19/48 (39%), Positives = 24/48 (50%), Frame = -3 Query: 227 AFPDYQEQKISFSSPPLSLRNALRDNLVE*FEPFPWQQIA*LPLSSYV 84 AFPD E +S + LR + DN E P P QQ PL+SY+ Sbjct: 13 AFPD-AEVAVSGQAGKFDLR--IVDNQFEGKRPVPRQQAVYAPLNSYI 57 >gi|7504893|pir||T23070 hypothetical protein H12D21.3 - Caenorhabditis elegans >gi|3881419|emb|CAB01527.1| (Z78067) predicted using Genefinder [Caenorhabditis elegans] >gi|3947576|emb|CAB07424.1| (Z92849) predicted using Genefinder [Caenorhabditis elegans] Length = 83 Frame 2 hits (HSPs): __________ __________________________________________________ Database sequence: | | | | | | 83 0 20 40 60 80 Plus Strand HSPs: Score = 61 (21.5 bits), Expect = 8.8, P = 1.0 Identities = 12/17 (70%), Positives = 13/17 (76%), Frame = +2 Query: 23 ASNGSNGSPNGDGIQAI 73 ASNGS G+PNG G Q I Sbjct: 43 ASNGSGGAPNGQGNQKI 59 >gi|4225944|emb|CAA10734.1| (AJ132698) centaurin beta 1A [Caenorhabditis elegans] Length = 826 Frame 2 hits (HSPs): ___ Frame 1 hits (HSPs): ____ __________________________________________________ Database sequence: | | | | | | | 826 0 150 300 450 600 750 Plus Strand HSPs: Score = 79 (27.8 bits), Expect = 10., Sum P(2) = 1.0 Identities = 15/32 (46%), Positives = 21/32 (65%), Frame = +2 Query: 146 QGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYR 241 +GYL KRSSN W RR+F + + +LY +R Sbjct: 279 EGYLYKRSSNAFKTWNRRWFQIKDKQLLYSHR 310 Score = 47 (16.5 bits), Expect = 10., Sum P(2) = 1.0 Identities = 13/54 (24%), Positives = 24/54 (44%), Frame = +1 Query: 394 NLLTSTIKVDADQSDLRFCFRIISPTKNYTLQXVRWT---KWIGLKKSLVLLLH 546 NL ++ D CF +++PT+ + LQ + W+ + +L LH Sbjct: 323 NLRICLVRPAPSNIDRIGCFELVTPTRIHLLQADSESLCQDWMRALQRTILALH 376 Parameters: filter=none matrix=BLOSUM62 V=50 B=50 E=10 gi H=1 sort_by_pvalue echofilter ctxfactor=5.97 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H Std. 0 BLOSUM62 0.318 0.135 0.401 +3 0 BLOSUM62 0.318 0.135 0.401 0.337 0.150 0.478 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +2 0 BLOSUM62 0.318 0.135 0.401 0.345 0.146 0.536 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a +1 0 BLOSUM62 0.318 0.135 0.401 0.362 0.163 0.642 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -1 0 BLOSUM62 0.318 0.135 0.401 0.363 0.163 0.564 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -2 0 BLOSUM62 0.318 0.135 0.401 0.350 0.156 0.549 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a -3 0 BLOSUM62 0.318 0.135 0.401 0.350 0.149 0.528 Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +3 0 200 196 10. 76 3 12 22 0.092 35 31 0.10 38 +2 0 201 197 10. 76 3 12 22 0.092 35 31 0.10 38 +1 0 201 197 10. 76 3 12 22 0.092 35 31 0.10 38 -1 0 201 198 10. 76 3 12 22 0.093 35 31 0.10 38 -2 0 201 198 10. 76 3 12 22 0.093 35 31 0.10 38 -3 0 200 196 10. 76 3 12 22 0.092 35 31 0.10 38 Statistics: Database: /usr/local/dot5/sl_home/beauty/seqdb/blast/nr Title: nr Release date: unknown Posted date: 4:06 PM CST Feb 28, 2001 Format: BLAST # of letters in database: 197,782,623 # of sequences in database: 625,274 # of database sequences satisfying E: 34 No. of states in DFA: 598 (59 KB) Total size of DFA: 224 KB (256 KB) Time to generate neighborhood: 0.02u 0.00s 0.02t Elapsed: 00:00:00 No. of threads or processors used: 6 Search cpu time: 192.25u 1.05s 193.30t Elapsed: 00:00:32 Total cpu time: 192.30u 1.08s 193.38t Elapsed: 00:00:32 Start: Mon Oct 1 20:06:55 2001 End: Mon Oct 1 20:07:27 2001
Annotated Domains Database: March 14, 2000
Release Date: March 14, 2000