8/8/05
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- Added a selection guide for picking nucleotide sequence to
display and translate into amino acids.
- Fixed bug that caused clipping rectange to overlap
neighbooring genomes.
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8/11/05
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- Fixed bug in sequence selection (a selection that
ended on the last base of the genome caused an infinite loop!).
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9/7/05
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- Added a new annotation key to the GBK file parser --
"signature".
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9/15/05
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- Fixed bug when inverting genome plot.
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9/21/05
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- Fixed bug when parsing genome files with no genomes.
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10/19/05
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- Fixed bug when clipping multiple genomes.
- No longer throw an error when the GIF color table is
exhausted -- use the closest color available instead.
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2/2/06
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- Added the ability to import genome annotations from Protein
Translation Table (ptt) files.
- Fixed a bug in exact match DNA searching.
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2/6/06
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- Added the ability to import annotations from any genome
file that contains annotation (i.e. asn, gbk, embl, ptt). As with
loading files, the file type is autodetected!
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4/12/06
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- Fixed a import bug in the GBK file format (assigning GI
values)
- Added a horizontal scroll bar for scrolling all genomes
left
and right
- Added a vertical scroll bar for zooming all genomes
- Added the ability to export genome data (i.e. sequence and
annotation) to the following formats: Fasta (protein and DNA), PTT and
GBK
- Fixed line numbers on GBK parse error messages.
- Fixed lack of intergenic space for certain annotation
combinations.
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4/20/06 |
- Fixed bug in the translation guide rendering (that could
cause infinite loop under certain conditions).
- Pressing the esc key now cancels any pending translation.
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4/26/06
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- Added the ability to load multiple genomes from a single
ASN file.
- Fixed the rendering of *multiple* annotations that all
overlap the origin.
- Added search by genome name.
- Modifed the EMBL parser to handle Artemis files.
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5/2/06
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- Fixed bug in searching for Padlock/MOL-PCR probes
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5/18/06
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- Added an annotation editor
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