BLASTP 2.2.17 [Aug-26-2007]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schäffer, Alejandro A., L. Aravind, Thomas L. Madden,
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= SMu0396
(192 letters)
Database: nr
5,470,121 sequences; 1,894,087,724 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24379046|ref|NP_721001.1| hypothetical protein SMU.566c ... 225 8e-58
gi|149008017|ref|ZP_01831574.1| Transposase [Streptococcus ... 206 4e-52
gi|116628110|ref|YP_820729.1| Transposase [Streptococcus th... 193 3e-48
gi|125717141|ref|YP_001034274.1| ORFA, transposon ISSsa1 [S... 174 2e-42
gi|149006096|ref|ZP_01829825.1| ORFA, transposon ISSsa2 [St... 170 3e-41
gi|116626988|ref|YP_819607.1| Transposase [Streptococcus th... 166 1e-39
gi|148999009|ref|ZP_01826442.1| Transposase [Streptococcus ... 165 1e-39
gi|8163692|gb|AAF73805.1|AF154034_2 hypothetical protein [S... 164 3e-39
gi|55822193|ref|YP_140634.1| IS861, transposase (orf1), IS3... 164 3e-39
gi|149010887|ref|ZP_01832192.1| Transposase [Streptococcus ... 164 4e-39
gi|81096535|ref|ZP_00874876.1| IS861, transposase OrfA [Str... 163 4e-39
gi|81097010|ref|ZP_00875327.1| IS861, transposase OrfA [Str... 160 3e-38
gi|116627004|ref|YP_819623.1| Transposase [Streptococcus th... 159 6e-38
gi|55820139|ref|YP_138581.1| IS861, transposase (orf1), IS3... 158 1e-37
gi|77409605|ref|ZP_00786281.1| IS861, transposase OrfA [Str... 154 3e-36
gi|55822832|ref|YP_141273.1| ISSpn1, transposase, IS3 famil... 153 5e-36
gi|22537225|ref|NP_688076.1| IS861, transposase OrfA [Strep... 153 7e-36
gi|55820303|ref|YP_138745.1| IS861, transposase (orf1), IS3... 148 2e-34
gi|15903384|ref|NP_358934.1| Degenerate transposase (orf1) ... 148 2e-34
gi|55821438|ref|YP_139880.1| IS861, transposase (orf1), IS3... 142 1e-32
gi|55823364|ref|YP_141805.1| IS861, transposase (orf1), IS3... 141 2e-32
gi|15903491|ref|NP_359041.1| Degenerate transposase (orf1) ... 141 2e-32
gi|71903736|ref|YP_280539.1| transposase [Streptococcus pyo... 141 2e-32
gi|94994579|ref|YP_602677.1| Transposase [Streptococcus pyo... 140 3e-32
gi|94987805|ref|YP_595906.1| transposase [Streptococcus pyo... 140 4e-32
gi|149013274|ref|ZP_01834032.1| Degenerate transposase (orf... 140 5e-32
gi|94988763|ref|YP_596864.1| transposase [Streptococcus pyo... 140 5e-32
gi|50914405|ref|YP_060377.1| Transposase [Streptococcus pyo... 139 8e-32
gi|15902542|ref|NP_358092.1| Degenerate transposase (orf1) ... 137 3e-31
gi|149002248|ref|ZP_01827190.1| Degenerate transposase (orf... 137 3e-31
gi|15674401|ref|NP_268575.1| conserved hypothetical protein... 137 3e-31
gi|71909986|ref|YP_281536.1| transposase [Streptococcus pyo... 137 3e-31
gi|56807561|ref|ZP_00365479.1| COG2963: Transposase and ina... 137 3e-31
gi|149012144|ref|ZP_01833253.1| Degenerate transposase (orf... 137 4e-31
gi|71902836|ref|YP_279639.1| transposase [Streptococcus pyo... 136 6e-31
gi|15902399|ref|NP_357949.1| Degenerate transposase (orf1) ... 136 7e-31
gi|19746310|ref|NP_607446.1| hypothetical protein spyM18_13... 135 1e-30
gi|94990655|ref|YP_598755.1| Transposase [Streptococcus pyo... 134 2e-30
gi|139473619|ref|YP_001128335.1| insertion sequence IS861 p... 134 2e-30
gi|94989684|ref|YP_597784.1| Transposase [Streptococcus pyo... 134 3e-30
gi|55822028|ref|YP_140469.1| IS861, transposase (orf1), IS3... 131 2e-29
gi|116628473|ref|YP_821092.1| Transposase [Streptococcus th... 127 3e-28
gi|55821756|ref|YP_140198.1| IS861, transposase (orf1), IS3... 124 3e-27
gi|21910547|ref|NP_664815.1| putative transposase associate... 123 7e-27
gi|148997654|ref|ZP_01825218.1| Degenerate transposase (orf... 122 9e-27
gi|148988935|ref|ZP_01820335.1| Degenerate transposase (orf... 122 1e-26
gi|148990524|ref|ZP_01821662.1| ORFA, transposon ISSsa2 [St... 121 3e-26
gi|28895759|ref|NP_802109.1| conserved hypothetical protein... 117 5e-25
gi|1196921|gb|AAA88574.1| unknown protein [Streptococcus ag... 117 5e-25
gi|55820833|ref|YP_139275.1| IS861, transposase (orf1), IS3... 112 1e-23
gi|55820119|ref|YP_138561.1| IS861, transposase (orf1), IS3... 112 1e-23
gi|50914079|ref|YP_060051.1| Transposase [Streptococcus pyo... 108 1e-22
gi|81097358|ref|ZP_00875649.1| conserved hypothetical prote... 106 7e-22
gi|148994340|ref|ZP_01823583.1| Degenerate transposase (orf... 104 3e-21
gi|148988647|ref|ZP_01820080.1| Degenerate transposase (orf... 103 4e-21
gi|148983954|ref|ZP_01817273.1| Degenerate transposase (orf... 103 6e-21
gi|15901436|ref|NP_346040.1| IS3-Spn1, hypothetical protein... 103 8e-21
gi|149006658|ref|ZP_01830344.1| hypothetical protein CGSSp1... 102 1e-20
gi|149007210|ref|ZP_01830874.1| hypothetical protein CGSSp1... 102 1e-20
gi|116516401|ref|YP_816003.1| hypothetical protein SPD_0499... 102 1e-20
gi|148992515|ref|ZP_01822210.1| hypothetical protein CGSSp9... 102 1e-20
gi|148986317|ref|ZP_01819189.1| Degenerate transposase (orf... 102 1e-20
gi|149010808|ref|ZP_01832179.1| Degenerate transposase (orf... 101 2e-20
gi|149021305|ref|ZP_01835551.1| Degenerate transposase (orf... 101 3e-20
gi|116516093|ref|YP_815869.1| hypothetical protein SPD_0359... 101 3e-20
gi|15902930|ref|NP_358480.1| Degenerate transposase (orf1) ... 100 7e-20
gi|149006680|ref|ZP_01830366.1| Degenerate transposase (orf... 100 7e-20
gi|15902795|ref|NP_358345.1| Degenerate transposase (orf1) ... 100 7e-20
gi|148984726|ref|ZP_01817994.1| Degenerate transposase (orf... 100 8e-20
gi|19704121|ref|NP_603683.1| Transposase [Fusobacterium nuc... 99 2e-19
gi|148988428|ref|ZP_01819875.1| Degenerate transposase (orf... 99 2e-19
gi|148998580|ref|ZP_01826020.1| Degenerate transposase (orf... 98 3e-19
gi|148992881|ref|ZP_01822500.1| Degenerate transposase (orf... 98 3e-19
gi|19705192|ref|NP_602687.1| Transposase [Fusobacterium nuc... 98 3e-19
gi|55820912|ref|YP_139354.1| ISSpn1, transposase, IS3 famil... 97 7e-19
gi|19703820|ref|NP_603382.1| Transposase [Fusobacterium nuc... 95 2e-18
gi|19704175|ref|NP_603737.1| Transposase [Fusobacterium nuc... 95 3e-18
gi|34762854|ref|ZP_00143838.1| Transposase [Fusobacterium n... 90 7e-17
gi|55822736|ref|YP_141177.1| IS861, transposase (orf1), IS3... 82 1e-14
gi|51860775|gb|AAU11512.1| transposase [Lactobacillus helve... 82 2e-14
gi|42519217|ref|NP_965147.1| hypothetical protein LJ1292 [L... 81 3e-14
gi|116628158|ref|YP_820777.1| Transposase [Streptococcus th... 80 5e-14
gi|116627244|ref|YP_819863.1| Transposase [Streptococcus th... 79 1e-13
gi|149004324|ref|ZP_01829084.1| hypothetical protein CGSSp1... 74 3e-12
gi|19703480|ref|NP_603042.1| Transposase [Fusobacterium nuc... 71 3e-11
gi|58337980|ref|YP_194565.1| transposase [Lactobacillus aci... 70 7e-11
gi|58336474|ref|YP_193059.1| transposase [Lactobacillus aci... 70 9e-11
gi|58337741|ref|YP_194326.1| transposase [Lactobacillus aci... 69 1e-10
gi|58338114|ref|YP_194699.1| transposase [Lactobacillus aci... 69 1e-10
gi|58336939|ref|YP_193524.1| transposase [Lactobacillus aci... 69 1e-10
gi|55823363|ref|YP_141804.1| IS861, transposase (orf1), IS3... 68 2e-10
gi|58338194|ref|YP_194779.1| transposase [Lactobacillus aci... 68 3e-10
gi|81097359|ref|ZP_00875650.1| IS861, transposase OrfA [Str... 66 8e-10
gi|15146031|gb|AAK83661.1| transposase [Lactobacillus delbr... 65 2e-09
gi|149006338|ref|ZP_01830050.1| Degenerate transposase (orf... 61 3e-08
gi|94500067|ref|ZP_01306602.1| putative protein, probably e... 59 1e-07
gi|55820913|ref|YP_139355.1| ISSpn1, transposase, IS3 famil... 54 3e-06
gi|19704778|ref|NP_604340.1| Transposase [Fusobacterium nuc... 53 7e-06
gi|55820832|ref|YP_139274.1| IS861, transposase (orf1), IS3... 53 1e-05
>gi|24379046|ref|NP_721001.1| hypothetical protein SMU.566c [Streptococcus mutans UA159]
gi|24379225|ref|NP_721180.1| hypothetical protein SMU.766 [Streptococcus mutans UA159]
gi|24379786|ref|NP_721741.1| hypothetical protein SMU.1379 [Streptococcus mutans UA159]
gi|24379812|ref|NP_721767.1| hypothetical protein SMU.1408c [Streptococcus mutans UA159]
gi|24380246|ref|NP_722201.1| hypothetical protein SMU.1894c [Streptococcus mutans UA159]
gi|24376942|gb|AAN58307.1|AE014901_7 conserved hypothetical protein [Streptococcus mutans UA159]
gi|24377138|gb|AAN58486.1|AE014918_4 conserved hypothetical protein [Streptococcus mutans UA159]
gi|24377752|gb|AAN59047.1|AE014971_9 conserved hypothetical protein [Streptococcus mutans UA159]
gi|24377781|gb|AAN59073.1|AE014974_3 conserved hypothetical protein [Streptococcus mutans UA159]
gi|24378256|gb|AAN59507.1|AE015015_7 conserved hypothetical protein [Streptococcus mutans UA159]
Length = 172
Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats.
Identities = 124/124 (100%), Positives = 124/124 (100%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP
Sbjct: 1 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK
Sbjct: 61 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 120
Query: 140 PKKK 143
PKKK
Sbjct: 121 PKKK 124
>gi|149008017|ref|ZP_01831574.1| Transposase [Streptococcus pneumoniae SP18-BS74]
gi|147760529|gb|EDK67505.1| Transposase [Streptococcus pneumoniae SP18-BS74]
Length = 190
Score = 206 bits (525), Expect = 4e-52, Method: Composition-based stats.
Identities = 116/165 (70%), Positives = 135/165 (81%), Gaps = 3/165 (1%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKL
Sbjct: 1 MNCTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKK 120
ID YGIE VKKGKNRYYSP+LKQE+I KVL EG ++ RVSL+Y LPS +L NW+AQY+K
Sbjct: 61 IDRYGIEFVKKGKNRYYSPDLKQEMIHKVLHEGWTKDRVSLEYGLPSRTILLNWLAQYRK 120
Query: 121 NRYTIVEKTRGRPPKMGRKPKKKIGRN---DRARATSERIRISES 162
N YTIVEKTRGR PKMGRKPK + +R +A +E +R ++
Sbjct: 121 NGYTIVEKTRGRVPKMGRKPKTRPEERTELERLQAENEYLRAEKA 165
>gi|116628110|ref|YP_820729.1| Transposase [Streptococcus thermophilus LMD-9]
gi|116101387|gb|ABJ66533.1| Transposase [Streptococcus thermophilus LMD-9]
Length = 169
Score = 193 bits (491), Expect = 3e-48, Method: Composition-based stats.
Identities = 108/139 (77%), Positives = 120/139 (86%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+NQGYSL+QLSNKFGI ISNLSYMIKLID YGIEI KKGKNRYYSP
Sbjct: 1 MKLTYEDKVQIYELRNQGYSLDQLSNKFGINISNLSYMIKLIDRYGIEIAKKGKNRYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVL +G SQ RVSL+YALP+ G LPNW+A YKKN YTIVEKTRGR KMGRK
Sbjct: 61 ELKQEMIDKVLYKGYSQDRVSLEYALPNRGTLPNWLAHYKKNGYTIVEKTRGRLSKMGRK 120
Query: 140 PKKKIGRNDRARATSERIR 158
PKKK+ +R +A +E +R
Sbjct: 121 PKKKLEEMERLQAENEYLR 139
>gi|125717141|ref|YP_001034274.1| ORFA, transposon ISSsa1 [Streptococcus sanguinis SK36]
gi|125718176|ref|YP_001035309.1| ORFA, transposon ISSsa2 [Streptococcus sanguinis SK36]
gi|125497058|gb|ABN43724.1| ORFA, transposon ISSsa1 [Streptococcus sanguinis SK36]
gi|125498093|gb|ABN44759.1| ORFA, transposon ISSsa2 [Streptococcus sanguinis SK36]
Length = 178
Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats.
Identities = 99/142 (69%), Positives = 121/142 (85%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ QG SL++LS+K+G+ +SNL Y+++LID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYEDKVRIYELRKQGISLKRLSDKYGMNLSNLKYLVRLIDRYGIENVKKGKNRYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQEII+KVL+EGRSQ+ VSLDYALPS G+LPNW+AQYKKN YTIVEKTRGRP +MGRK
Sbjct: 61 ELKQEIINKVLIEGRSQLSVSLDYALPSSGLLPNWLAQYKKNGYTIVEKTRGRPARMGRK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
KK ++ +R + +ER+R
Sbjct: 121 RKKTWEEMTELERLQEENERLR 142
>gi|149006096|ref|ZP_01829825.1| ORFA, transposon ISSsa2 [Streptococcus pneumoniae SP18-BS74]
gi|147762452|gb|EDK69413.1| ORFA, transposon ISSsa2 [Streptococcus pneumoniae SP18-BS74]
Length = 178
Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats.
Identities = 101/142 (71%), Positives = 114/142 (80%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKG N+YYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGNNQYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVL SQ RVSL YALP+ GMLPNW+AQYKKN YTIVEKTRGRP KM RK
Sbjct: 61 ELKQEMIDKVLHANWSQDRVSLKYALPNRGMLPNWLAQYKKNGYTIVEKTRGRPAKMERK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
KK ++ +R + +ER+R
Sbjct: 121 RKKTWEEMTELERLQEENERLR 142
>gi|116626988|ref|YP_819607.1| Transposase [Streptococcus thermophilus LMD-9]
gi|116100265|gb|ABJ65411.1| Transposase [Streptococcus thermophilus LMD-9]
Length = 178
Score = 166 bits (419), Expect = 1e-39, Method: Composition-based stats.
Identities = 96/142 (67%), Positives = 112/142 (78%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+NQG + QLS +FG+ S L YM +LI+ YGIEI+KKGKNRY SP
Sbjct: 1 MKLTYEDKVQIYELRNQGQTFNQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKNRYDSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVLLE RSQ VSLDY LPS GMLPNWIAQYKKN YT++EK RGR PKMGRK
Sbjct: 61 ELKQEMIDKVLLEDRSQQSVSLDYCLPSGGMLPNWIAQYKKNGYTLLEKRRGRVPKMGRK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
KK ++ +R + +ER+R
Sbjct: 121 RKKTWEEMTELERLQEENERLR 142
>gi|148999009|ref|ZP_01826442.1| Transposase [Streptococcus pneumoniae SP11-BS70]
gi|147755132|gb|EDK62186.1| Transposase [Streptococcus pneumoniae SP11-BS70]
Length = 167
Score = 165 bits (418), Expect = 1e-39, Method: Composition-based stats.
Identities = 101/142 (71%), Positives = 115/142 (80%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+YEDKV IYEL+ QGYSLE++SNKF I SNL YMIKLID YGIE +KKGKNRYYSP
Sbjct: 1 MKLSYEDKVQIYELRKQGYSLEKISNKFEINNSNLRYMIKLIDRYGIEFIKKGKNRYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVL E SQ RVSL YALP+ GMLPNW+AQYKKN YTIVEKTR R PKMGRK
Sbjct: 61 ELKQEMIDKVLHENWSQDRVSLKYALPNRGMLPNWLAQYKKNGYTIVEKTRERVPKMGRK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
KK ++ +R + +ER+R
Sbjct: 121 RKKTWEEMTELERLQEENERLR 142
>gi|8163692|gb|AAF73805.1|AF154034_2 hypothetical protein [Streptococcus pneumoniae]
Length = 171
Score = 164 bits (415), Expect = 3e-39, Method: Composition-based stats.
Identities = 91/124 (73%), Positives = 104/124 (83%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIK ID YGIE KKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKWIDRYGIEFGKKGKNRYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
+LKQE+I+KVL EG ++ RVSL+Y LPS +L NW+AQY+KN YTIVEK RGR PKMGRK
Sbjct: 61 DLKQEMINKVLHEGWTKDRVSLEYGLPSRTILLNWLAQYRKNGYTIVEKPRGRVPKMGRK 120
Query: 140 PKKK 143
PK +
Sbjct: 121 PKTR 124
>gi|55822193|ref|YP_140634.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55738178|gb|AAV61819.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 152
Score = 164 bits (414), Expect = 3e-39, Method: Composition-based stats.
Identities = 95/142 (66%), Positives = 111/142 (78%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ QG + QLS +FG+ S L YM +LI+ YGIEI+KKGK+RY SP
Sbjct: 1 MKLTYEDKVQIYELRKQGQTFNQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKHRYDSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVLLEGRSQ VS DY LPS GMLPNWIAQYKKN YT++EK GR PKMGRK
Sbjct: 61 ELKQEMIDKVLLEGRSQKSVSPDYCLPSGGMLPNWIAQYKKNGYTLLEKRGGRVPKMGRK 120
Query: 140 PKKK---IGRNDRARATSERIR 158
PKKK + +R +A +E +R
Sbjct: 121 PKKKPEEMTELERLQAENEYLR 142
>gi|149010887|ref|ZP_01832192.1| Transposase [Streptococcus pneumoniae SP19-BS75]
gi|147764523|gb|EDK71453.1| Transposase [Streptococcus pneumoniae SP19-BS75]
Length = 178
Score = 164 bits (414), Expect = 4e-39, Method: Composition-based stats.
Identities = 94/142 (66%), Positives = 113/142 (79%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+YEDKV IYEL+ QG S +QLS +FG+ +S L YM+KLID YGIEIVKKGKNR+YS
Sbjct: 1 MKLSYEDKVQIYELRKQGQSFKQLSKRFGVDVSGLKYMVKLIDRYGIEIVKKGKNRHYSS 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
+LKQE++DKVLLEG SQ +SLDYALP+ GML W AQYKKN YTIVEKTRGRP KMGRK
Sbjct: 61 KLKQEMMDKVLLEGCSQRSISLDYALPNQGMLSFWPAQYKKNGYTIVEKTRGRPAKMGRK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
KK ++ +R + +ER+R
Sbjct: 121 RKKTWEEMTELERLQEENERLR 142
>gi|81096535|ref|ZP_00874876.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
gi|81096833|ref|ZP_00875162.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
gi|80977137|gb|EAP40691.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
gi|80977415|gb|EAP40957.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
Length = 178
Score = 163 bits (413), Expect = 4e-39, Method: Composition-based stats.
Identities = 92/142 (64%), Positives = 113/142 (79%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+YEDK+ IYEL+ G S++ LSN+F I S + YM++LID YGI IVKKGKN YY P
Sbjct: 1 MKLSYEDKIKIYELRQSGQSIKNLSNQFTISESVIQYMLRLIDRYGINIVKKGKNTYYPP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVL+EG S +V+LDYALP+ G LPNWIAQYKKN YTI+EKTRGRPPKMGRK
Sbjct: 61 ELKQEMIDKVLIEGLSLNQVALDYALPNRGTLPNWIAQYKKNGYTILEKTRGRPPKMGRK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
PKK ++ +R + +ER+R
Sbjct: 121 PKKTWEEMTELERLQEENERLR 142
>gi|81097010|ref|ZP_00875327.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
gi|80976934|gb|EAP40500.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
Length = 178
Score = 160 bits (405), Expect = 3e-38, Method: Composition-based stats.
Identities = 97/168 (57%), Positives = 123/168 (73%), Gaps = 4/168 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+YEDK+ IYEL+ G S++ LSN+F I S + YM++LID YGI IVKKGKN Y P
Sbjct: 1 MKLSYEDKIEIYELRQSGQSIKNLSNQFTISESVIQYMLRLIDRYGINIVKKGKNTYSPP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVLL+ +S + VSLDYALP+ G LPNWIAQYKKN YTI+EKTRGRPPKMGRK
Sbjct: 61 ELKQEMIDKVLLQKQSSLSVSLDYALPNRGTLPNWIAQYKKNGYTILEKTRGRPPKMGRK 120
Query: 140 PKK---KIGRNDRARATSERIRISESGECCSKKVERTPIEGRKRARRK 184
PKK ++ +R + +ER+R +E+ + R E R++ R K
Sbjct: 121 PKKTWEEMTELERLQEENERLR-TENAYLKKLRALRLRDEAREQERLK 167
>gi|116627004|ref|YP_819623.1| Transposase [Streptococcus thermophilus LMD-9]
gi|116100281|gb|ABJ65427.1| Transposase [Streptococcus thermophilus LMD-9]
Length = 172
Score = 159 bits (403), Expect = 6e-38, Method: Composition-based stats.
Identities = 93/142 (65%), Positives = 110/142 (77%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ G + QLS +FG+ S L YM +LI+ YGIEI+KKGK+RY SP
Sbjct: 1 MKLTYEDKVQIYELRKHGQTFNQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKHRYDSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
+LKQE+IDKVLLEGRSQ VSLDY L S GMLPNWIAQYKKN YT++EK GR PKMGRK
Sbjct: 61 DLKQEMIDKVLLEGRSQKSVSLDYCLSSGGMLPNWIAQYKKNGYTLLEKRGGRVPKMGRK 120
Query: 140 PKKK---IGRNDRARATSERIR 158
PKKK + +R +A +E +R
Sbjct: 121 PKKKPEEMTELERLQAENEYLR 142
>gi|55820139|ref|YP_138581.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736124|gb|AAV59766.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 152
Score = 158 bits (400), Expect = 1e-37, Method: Composition-based stats.
Identities = 92/142 (64%), Positives = 109/142 (76%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ G + QLS +FG+ S L YM++LI+ YGIEI+KKGK+RY SP
Sbjct: 1 MKLTYEDKVQIYELRKHGQTFNQLSKRFGVDASGLRYMMRLIERYGIEIIKKGKHRYDSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVLLEGRSQ VSLDY L S GMLPNWIAQ KKN YT++EK GR PKMG K
Sbjct: 61 ELKQEMIDKVLLEGRSQKSVSLDYCLSSGGMLPNWIAQNKKNGYTLLEKRGGRVPKMGSK 120
Query: 140 PKKK---IGRNDRARATSERIR 158
PKKK + +R +A +E +R
Sbjct: 121 PKKKPEEMTELERLQAENEYLR 142
>gi|77409605|ref|ZP_00786281.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77171780|gb|EAO74973.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
Length = 182
Score = 154 bits (389), Expect = 3e-36, Method: Composition-based stats.
Identities = 85/146 (58%), Positives = 112/146 (76%), Gaps = 3/146 (2%)
Query: 16 GVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNR 75
G F +L+YEDK+ IYEL+ G S Q+S ++ ++ISNL YMIKL+D YG+EIV+KG+N
Sbjct: 1 GCFSDELSYEDKLEIYELRKIGMSWSQISQRYDVRISNLKYMIKLMDRYGVEIVEKGRNE 60
Query: 76 YYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPK 135
YY PELKQE+IDKVL+ G SQ+ VSLDYAL + +L NW++Q+KKN YTIVEKTRGRP K
Sbjct: 61 YYPPELKQEMIDKVLIHGCSQLSVSLDYALSNCSILTNWLSQFKKNGYTIVEKTRGRPSK 120
Query: 136 MGRKPKK---KIGRNDRARATSERIR 158
MGRK KK ++ +R + +ER+R
Sbjct: 121 MGRKRKKTWEEMTELERLQEENERLR 146
>gi|55822832|ref|YP_141273.1| ISSpn1, transposase, IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55738817|gb|AAV62458.1| ISSpn1, transposase, IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 257
Score = 153 bits (387), Expect = 5e-36, Method: Composition-based stats.
Identities = 85/141 (60%), Positives = 94/141 (66%), Gaps = 36/141 (25%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFWG+FIMKLTYEDKV IYEL+
Sbjct: 1 MNCTPKVRQKKSNFWGIFIMKLTYEDKVQIYELR-------------------------- 34
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKK 120
K+GKNRYYSP+LKQE+IDK+LLEG SQ V LDY L + G+L NWIAQY K
Sbjct: 35 ---------KQGKNRYYSPKLKQEMIDKILLEGCSQQSVCLDYGLSNQGLLNNWIAQY-K 84
Query: 121 NRYTIVEKTRGRPPKMGRKPK 141
N YTIVEKTRGRPPK+GRK K
Sbjct: 85 NGYTIVEKTRGRPPKIGRKRK 105
>gi|22537225|ref|NP_688076.1| IS861, transposase OrfA [Streptococcus agalactiae 2603V/R]
gi|22537669|ref|NP_688520.1| IS861, transposase OrfA [Streptococcus agalactiae 2603V/R]
gi|76787008|ref|YP_329141.1| IS861, transposase orfA [Streptococcus agalactiae A909]
gi|76787121|ref|YP_330155.1| IS861, transposase orfA [Streptococcus agalactiae A909]
gi|76799012|ref|ZP_00781209.1| IS861, transposase OrfA [Streptococcus agalactiae 18RS21]
gi|77407692|ref|ZP_00784447.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77407814|ref|ZP_00784567.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77407882|ref|ZP_00784634.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77407993|ref|ZP_00784742.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77408917|ref|ZP_00785641.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77409244|ref|ZP_00785952.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77409681|ref|ZP_00786349.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|22534091|gb|AAM99948.1|AE014240_19 IS861, transposase OrfA [Streptococcus agalactiae 2603V/R]
gi|22534556|gb|AAN00393.1|AE014261_21 IS861, transposase OrfA [Streptococcus agalactiae 2603V/R]
gi|76562065|gb|ABA44649.1| IS861, transposase orfA [Streptococcus agalactiae A909]
gi|76562178|gb|ABA44762.1| IS861, transposase orfA [Streptococcus agalactiae A909]
gi|76585642|gb|EAO62203.1| IS861, transposase OrfA [Streptococcus agalactiae 18RS21]
gi|77171714|gb|EAO74915.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77172157|gb|EAO75318.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77172459|gb|EAO75604.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77173355|gb|EAO76475.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77173527|gb|EAO76644.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77173561|gb|EAO76677.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
gi|77173691|gb|EAO76805.1| IS861, transposase OrfA [Streptococcus agalactiae COH1]
Length = 178
Score = 153 bits (386), Expect = 7e-36, Method: Composition-based stats.
Identities = 85/142 (59%), Positives = 111/142 (78%), Gaps = 3/142 (2%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+YEDK+ IYEL+ G S Q+S ++ ++ISNL YMIKL+D YG+EIV+KG+N YY P
Sbjct: 1 MKLSYEDKLEIYELRKIGMSWSQISQRYDVRISNLKYMIKLMDRYGVEIVEKGRNEYYPP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQE+IDKVL+ G SQ+ VSLDYAL + +L NW++Q+KKN YTIVEKTRGRP KMGRK
Sbjct: 61 ELKQEMIDKVLIHGCSQLSVSLDYALSNCSILTNWLSQFKKNGYTIVEKTRGRPSKMGRK 120
Query: 140 PKK---KIGRNDRARATSERIR 158
KK ++ +R + +ER+R
Sbjct: 121 RKKTWEEMTELERLQEENERLR 142
>gi|55820303|ref|YP_138745.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736288|gb|AAV59930.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 139
Score = 148 bits (374), Expect = 2e-34, Method: Composition-based stats.
Identities = 85/133 (63%), Positives = 103/133 (77%), Gaps = 3/133 (2%)
Query: 33 LKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLE 92
++ QG S +QLS +FG+ S L YM +LI+ YGIEI+KKGKN YYSPELKQE+IDKVLLE
Sbjct: 1 MRKQGESFKQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKNHYYSPELKQEMIDKVLLE 60
Query: 93 GRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPKKK---IGRNDR 149
GRSQ VSLDY L S GMLPNWIAQYKKN YT++EK RGR PKMGRKPKKK + +R
Sbjct: 61 GRSQKSVSLDYCLSSGGMLPNWIAQYKKNGYTLLEKRRGRVPKMGRKPKKKPEEMTELER 120
Query: 150 ARATSERIRISES 162
+A +E +R+ +
Sbjct: 121 LQAENEYLRVENA 133
>gi|15903384|ref|NP_358934.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
gi|15458987|gb|AAL00145.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
Length = 89
Score = 148 bits (373), Expect = 2e-34, Method: Composition-based stats.
Identities = 77/89 (86%), Positives = 82/89 (92%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 1 MNCTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
IDHYGIE VKKGKNRYYSP+LKQE+I KV
Sbjct: 61 IDHYGIEFVKKGKNRYYSPDLKQEMIHKV 89
>gi|55821438|ref|YP_139880.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55737423|gb|AAV61065.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 101
Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats.
Identities = 75/96 (78%), Positives = 83/96 (86%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFWGVFIMKLTYEDKV IYEL+ QG + QLS +FG+ S L YM +L
Sbjct: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVQIYELRKQGQTFNQLSKRFGVDASGLKYMTRL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQ 96
I+ YGIEI+KKGKN YYSPELKQE+IDKVLLEGRSQ
Sbjct: 61 IERYGIEIIKKGKNCYYSPELKQEMIDKVLLEGRSQ 96
>gi|55823364|ref|YP_141805.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55739349|gb|AAV62990.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 101
Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/96 (77%), Positives = 82/96 (85%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFWGVFIMKLTYEDKV IYEL+ G + QLS +FG+ S L YM +L
Sbjct: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVQIYELRKHGQTFNQLSKRFGVDASGLKYMTRL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQ 96
I+ YGIEI+KKGKN YYSPELKQE+IDKVLLEGRSQ
Sbjct: 61 IERYGIEIIKKGKNCYYSPELKQEMIDKVLLEGRSQ 96
>gi|15903491|ref|NP_359041.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
gi|15459104|gb|AAL00252.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
Length = 90
Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats.
Identities = 75/89 (84%), Positives = 80/89 (89%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFW VFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 2 MNCTPKVRQKKSNFWSVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 61
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYYSP+LKQE+I KV
Sbjct: 62 IDRYGIEFVKKGKNRYYSPDLKQEMIHKV 90
>gi|71903736|ref|YP_280539.1| transposase [Streptococcus pyogenes MGAS6180]
gi|71802831|gb|AAX72184.1| transposase [Streptococcus pyogenes MGAS6180]
Length = 177
Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/127 (62%), Positives = 97/127 (76%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQEII++VL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMG
Sbjct: 65 SPELKQEIINEVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|94994579|ref|YP_602677.1| Transposase [Streptococcus pyogenes MGAS10750]
gi|94548087|gb|ABF38133.1| Transposase [Streptococcus pyogenes MGAS10750]
Length = 177
Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats.
Identities = 79/127 (62%), Positives = 97/127 (76%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S++ YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDVKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQEII+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMG
Sbjct: 65 SPELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|94987805|ref|YP_595906.1| transposase [Streptococcus pyogenes MGAS9429]
gi|94991680|ref|YP_599779.1| Transposase [Streptococcus pyogenes MGAS2096]
gi|94541313|gb|ABF31362.1| transposase [Streptococcus pyogenes MGAS9429]
gi|94545188|gb|ABF35235.1| Transposase [Streptococcus pyogenes MGAS2096]
Length = 177
Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats.
Identities = 79/127 (62%), Positives = 97/127 (76%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNHYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQ+II+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMG
Sbjct: 65 SPELKQKIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|149013274|ref|ZP_01834032.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
gi|147762939|gb|EDK69885.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
Length = 89
Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats.
Identities = 74/89 (83%), Positives = 80/89 (89%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNC PKVRQKKSNFWGVFIMKL+Y+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 1 MNCPPKVRQKKSNFWGVFIMKLSYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYYSP+LKQE+I KV
Sbjct: 61 IDRYGIEFVKKGKNRYYSPDLKQEMIHKV 89
>gi|94988763|ref|YP_596864.1| transposase [Streptococcus pyogenes MGAS9429]
gi|94992588|ref|YP_600687.1| Transposase [Streptococcus pyogenes MGAS2096]
gi|94542271|gb|ABF32320.1| transposase [Streptococcus pyogenes MGAS9429]
gi|94546096|gb|ABF36143.1| Transposase [Streptococcus pyogenes MGAS2096]
Length = 177
Score = 140 bits (352), Expect = 5e-32, Method: Composition-based stats.
Identities = 79/127 (62%), Positives = 97/127 (76%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQ+II+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMG
Sbjct: 65 SPELKQKIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|50914405|ref|YP_060377.1| Transposase [Streptococcus pyogenes MGAS10394]
gi|50903479|gb|AAT87194.1| Transposase [Streptococcus pyogenes MGAS10394]
Length = 177
Score = 139 bits (350), Expect = 8e-32, Method: Composition-based stats.
Identities = 78/127 (61%), Positives = 96/127 (75%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQEII+KVL++G+SQ + SLDYALP+ ML W+AQYKKN YTI+EK RG P KMG
Sbjct: 65 SPELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWLAQYKKNGYTILEKPRGGPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|15902542|ref|NP_358092.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
gi|15458070|gb|AAK99302.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
Length = 91
Score = 137 bits (346), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/89 (83%), Positives = 80/89 (89%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKL
Sbjct: 3 MNYTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKL 62
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYYSP+LKQE+I KV
Sbjct: 63 IDRYGIEFVKKGKNRYYSPDLKQEMIHKV 91
>gi|149002248|ref|ZP_01827190.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP14-BS69]
gi|149005684|ref|ZP_01829423.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP18-BS74]
gi|149021530|ref|ZP_01835585.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
gi|147759563|gb|EDK66554.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP14-BS69]
gi|147762624|gb|EDK69584.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP18-BS74]
gi|147930226|gb|EDK81211.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
Length = 89
Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/89 (83%), Positives = 81/89 (91%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKL
Sbjct: 1 MNYTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYYSP+LKQE+I+KV
Sbjct: 61 IDRYGIEFVKKGKNRYYSPDLKQEMINKV 89
>gi|15674401|ref|NP_268575.1| conserved hypothetical protein, IS861 associated [Streptococcus
pyogenes M1 GAS]
gi|15675274|ref|NP_269448.1| conserved hypothetical protein - transposon IS861 associated
[Streptococcus pyogenes M1 GAS]
gi|13621492|gb|AAK33296.1| conserved hypothetical protein, IS861 associated [Streptococcus
pyogenes M1 GAS]
gi|13622449|gb|AAK34169.1| conserved hypothetical protein - transposon IS861 associated
[Streptococcus pyogenes M1 GAS]
Length = 171
Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 96/125 (76%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YYSP
Sbjct: 1 MKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNHYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQEII+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMGRK
Sbjct: 61 ELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMGRK 120
Query: 140 PKKKI 144
KK +
Sbjct: 121 RKKNL 125
>gi|71909986|ref|YP_281536.1| transposase [Streptococcus pyogenes MGAS5005]
gi|71910903|ref|YP_282453.1| transposase [Streptococcus pyogenes MGAS5005]
gi|71852768|gb|AAZ50791.1| transposase [Streptococcus pyogenes MGAS5005]
gi|71853685|gb|AAZ51708.1| transposase [Streptococcus pyogenes MGAS5005]
Length = 171
Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 96/125 (76%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YYSP
Sbjct: 1 MKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNHYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQEII+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMGRK
Sbjct: 61 ELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMGRK 120
Query: 140 PKKKI 144
KK +
Sbjct: 121 RKKNL 125
>gi|56807561|ref|ZP_00365479.1| COG2963: Transposase and inactivated derivatives [Streptococcus
pyogenes M49 591]
Length = 171
Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats.
Identities = 79/125 (63%), Positives = 96/125 (76%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YYSP
Sbjct: 1 MKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQEII+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMGRK
Sbjct: 61 ELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMGRK 120
Query: 140 PKKKI 144
KK +
Sbjct: 121 RKKNL 125
>gi|149012144|ref|ZP_01833253.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
gi|147763746|gb|EDK70680.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
Length = 89
Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats.
Identities = 74/89 (83%), Positives = 79/89 (88%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 1 MNYTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYY P+LKQE+I KV
Sbjct: 61 IDRYGIEFVKKGKNRYYPPDLKQEMIHKV 89
>gi|71902836|ref|YP_279639.1| transposase [Streptococcus pyogenes MGAS6180]
gi|71801931|gb|AAX71284.1| transposase [Streptococcus pyogenes MGAS6180]
Length = 177
Score = 136 bits (343), Expect = 6e-31, Method: Composition-based stats.
Identities = 78/127 (61%), Positives = 95/127 (74%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQEII+KVL++G+SQ + SLDYAL + ML WIAQYKKN YTI+EK RG P KMG
Sbjct: 65 SPELKQEIINKVLIDGQSQKQTSLDYALLTSSMLSRWIAQYKKNGYTILEKPRGGPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|15902399|ref|NP_357949.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
gi|15457914|gb|AAK99159.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
Length = 91
Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats.
Identities = 73/89 (82%), Positives = 80/89 (89%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKL+Y+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKL
Sbjct: 3 MNYTPKVRQKKSNFWGVFIMKLSYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKL 62
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYYSP+LKQE+I KV
Sbjct: 63 IDRYGIEFVKKGKNRYYSPDLKQEMIHKV 91
>gi|19746310|ref|NP_607446.1| hypothetical protein spyM18_1344 [Streptococcus pyogenes MGAS8232]
gi|19748501|gb|AAL97945.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 174
Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats.
Identities = 78/122 (63%), Positives = 95/122 (77%)
Query: 23 TYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPELK 82
T E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YYSPELK
Sbjct: 7 TQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYYSPELK 66
Query: 83 QEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPKK 142
QEII+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMGRK KK
Sbjct: 67 QEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMGRKRKK 126
Query: 143 KI 144
+
Sbjct: 127 NL 128
>gi|94990655|ref|YP_598755.1| Transposase [Streptococcus pyogenes MGAS10270]
gi|94544163|gb|ABF34211.1| Transposase [Streptococcus pyogenes MGAS10270]
Length = 121
Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/114 (62%), Positives = 87/114 (76%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRG 131
SPELKQEII+KVL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RG
Sbjct: 65 SPELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRG 118
>gi|139473619|ref|YP_001128335.1| insertion sequence IS861 putative transposase [Streptococcus
pyogenes str. Manfredo]
gi|134271866|emb|CAM30103.1| insertion sequence IS861 putative transposase [Streptococcus
pyogenes str. Manfredo]
Length = 171
Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats.
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MK E KV IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YYSP
Sbjct: 1 MKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYYSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
ELKQEII++VL++G+SQ + SLDYALP+ ML WIAQYKKN YTI+EK RG P KMGRK
Sbjct: 61 ELKQEIINEVLIDGQSQKQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGGPSKMGRK 120
Query: 140 PKKKI 144
KK +
Sbjct: 121 RKKNL 125
>gi|94989684|ref|YP_597784.1| Transposase [Streptococcus pyogenes MGAS10270]
gi|94543192|gb|ABF33240.1| Transposase [Streptococcus pyogenes MGAS10270]
Length = 177
Score = 134 bits (336), Expect = 3e-30, Method: Composition-based stats.
Identities = 76/127 (59%), Positives = 95/127 (74%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F MK E K+ IYEL+ G S++ +S KF + S+L YMI+LID YG+ IV+K KN YY
Sbjct: 5 FFMKFNQETKIKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYY 64
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
SPELKQ+II+KVL++G+SQ + SLDYAL + ML WIAQYKKN YTI+EK RG P KMG
Sbjct: 65 SPELKQKIINKVLIDGQSQKQTSLDYALLTSSMLSRWIAQYKKNGYTILEKPRGGPSKMG 124
Query: 138 RKPKKKI 144
RK KK +
Sbjct: 125 RKRKKNL 131
>gi|55822028|ref|YP_140469.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55738013|gb|AAV61654.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 123
Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats.
Identities = 75/113 (66%), Positives = 89/113 (78%), Gaps = 3/113 (2%)
Query: 49 IKISNLSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSH 108
+ +S L YM+KLIDHYGI I+KKGKNRYYSP+LK+E+IDKVLLEG SQ VSLDY L S
Sbjct: 1 MNVSGLKYMVKLIDHYGINIIKKGKNRYYSPKLKREMIDKVLLEGCSQQSVSLDYCLSSG 60
Query: 109 GMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPKKK---IGRNDRARATSERIR 158
GMLPNWIAQYKKN YT++EK GR PKM RKPKKK + +R +A +E +R
Sbjct: 61 GMLPNWIAQYKKNGYTLLEKRGGRVPKMERKPKKKPEEMTELERLQAENEYLR 113
>gi|116628473|ref|YP_821092.1| Transposase [Streptococcus thermophilus LMD-9]
gi|116101750|gb|ABJ66896.1| Transposase [Streptococcus thermophilus LMD-9]
Length = 94
Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats.
Identities = 68/94 (72%), Positives = 77/94 (81%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ QG + QLS +FG+ S L YM +LI+ YGIEI+KKGK+RY SP
Sbjct: 1 MKLTYEDKVQIYELRKQGQTFNQLSKRFGVDASGLRYMTRLIERYGIEIIKKGKHRYDSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPN 113
ELKQE+IDKVLLEGRSQ VSLDY LPS GMLPN
Sbjct: 61 ELKQEMIDKVLLEGRSQKSVSLDYCLPSGGMLPN 94
>gi|55821756|ref|YP_140198.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55822009|ref|YP_140450.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55823675|ref|YP_142116.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55737741|gb|AAV61383.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55737994|gb|AAV61635.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55739660|gb|AAV63301.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 94
Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats.
Identities = 68/94 (72%), Positives = 77/94 (81%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ QG + QLS +FG+ S L YM +LI+ YGIEI+KKGK+RY SP
Sbjct: 1 MKLTYEDKVQIYELRKQGQTFNQLSKRFGVVASELRYMKRLIERYGIEIIKKGKHRYDSP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPN 113
ELKQE+IDKVLLEGRSQ VSLDY LPS GMLPN
Sbjct: 61 ELKQEMIDKVLLEGRSQKSVSLDYCLPSGGMLPN 94
>gi|21910547|ref|NP_664815.1| putative transposase associated protein [Streptococcus pyogenes
MGAS315]
gi|21904747|gb|AAM79618.1| putative transposase associated protein [Streptococcus pyogenes
MGAS315]
Length = 155
Score = 123 bits (308), Expect = 7e-27, Method: Composition-based stats.
Identities = 69/108 (63%), Positives = 85/108 (78%)
Query: 37 GYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQ 96
G S++ + KF + S+L YMI+LID YG+ IV+K KN YYSPELKQEII+KVL++G+SQ
Sbjct: 2 GESIKSIPKKFDMAESDLKYMIRLIDRYGVTIVQKCKNNYYSPELKQEIINKVLIDGQSQ 61
Query: 97 IRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPKKKI 144
+ SLDYALP+ ML WIAQYKKN YTI+EK RGRP KMGRK KK +
Sbjct: 62 KQTSLDYALPTSSMLSRWIAQYKKNGYTILEKPRGRPSKMGRKRKKNL 109
>gi|148997654|ref|ZP_01825218.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP11-BS70]
gi|147756153|gb|EDK63195.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP11-BS70]
Length = 90
Score = 122 bits (307), Expect = 9e-27, Method: Composition-based stats.
Identities = 68/89 (76%), Positives = 73/89 (82%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNC PKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 2 MNCPPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 61
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKK K LKQE+I+KV
Sbjct: 62 IDRYGIEFVKKRKKSLLFSCLKQEMINKV 90
>gi|148988935|ref|ZP_01820335.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP6-BS73]
gi|147925432|gb|EDK76509.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP6-BS73]
Length = 89
Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats.
Identities = 67/89 (75%), Positives = 76/89 (85%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKV+ +K +G FIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 1 MNYTPKVKTEKILTFGCFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 60
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKV 89
ID YGIE VKKGKNRYYSP+LKQE+I+KV
Sbjct: 61 IDRYGIEFVKKGKNRYYSPDLKQEMINKV 89
>gi|148990524|ref|ZP_01821662.1| ORFA, transposon ISSsa2 [Streptococcus pneumoniae SP6-BS73]
gi|147924240|gb|EDK75337.1| ORFA, transposon ISSsa2 [Streptococcus pneumoniae SP6-BS73]
Length = 144
Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats.
Identities = 72/108 (66%), Positives = 85/108 (78%), Gaps = 3/108 (2%)
Query: 54 LSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPN 113
L YM+KLID YGIEIVKKGKNR+YS +LKQE++DK LLEG SQ +SLDYALP+ GML
Sbjct: 1 LKYMVKLIDRYGIEIVKKGKNRHYSSKLKQEMMDKALLEGCSQRSISLDYALPNQGMLSF 60
Query: 114 WIAQYKKNRYTIVEKTRGRPPKMGRKPKK---KIGRNDRARATSERIR 158
W AQYKKN YTIVEKTRGRP KMGRK KK ++ +R + +ER+R
Sbjct: 61 WPAQYKKNGYTIVEKTRGRPAKMGRKRKKTWEEMTELERLQEENERLR 108
>gi|28895759|ref|NP_802109.1| conserved hypothetical protein, IS861 associated [Streptococcus
pyogenes SSI-1]
gi|28811008|dbj|BAC63942.1| conserved hypothetical protein, IS861 associated [Streptococcus
pyogenes SSI-1]
Length = 142
Score = 117 bits (292), Expect = 5e-25, Method: Composition-based stats.
Identities = 65/93 (69%), Positives = 77/93 (82%)
Query: 52 SNLSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGML 111
S+L YMI+LID YG+ IV+K KN YYSPELKQEII+KVL++G+SQ + SLDYALP+ ML
Sbjct: 4 SDLKYMIRLIDRYGVTIVQKCKNNYYSPELKQEIINKVLIDGQSQKQTSLDYALPTSSML 63
Query: 112 PNWIAQYKKNRYTIVEKTRGRPPKMGRKPKKKI 144
WIAQYKKN YTI+EK RGRP KMGRK KK +
Sbjct: 64 SRWIAQYKKNGYTILEKPRGRPSKMGRKRKKNL 96
>gi|1196921|gb|AAA88574.1| unknown protein [Streptococcus agalactiae]
Length = 141
Score = 117 bits (292), Expect = 5e-25, Method: Composition-based stats.
Identities = 65/105 (61%), Positives = 83/105 (79%), Gaps = 3/105 (2%)
Query: 57 MIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIA 116
MIKL+D YG+EIV+KG+N YY PELKQE+IDKVL+ G SQ+ VSLDYAL + +L NW++
Sbjct: 1 MIKLMDRYGVEIVEKGRNEYYPPELKQEMIDKVLIHGCSQLSVSLDYALSNCSILTNWLS 60
Query: 117 QYKKNRYTIVEKTRGRPPKMGRKPKK---KIGRNDRARATSERIR 158
Q+KKN YTIVEKTRGRP KMGRK KK ++ +R + +ER+R
Sbjct: 61 QFKKNGYTIVEKTRGRPSKMGRKRKKTWEEMTELERLQEENERLR 105
>gi|55820833|ref|YP_139275.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736818|gb|AAV60460.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 92
Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/74 (75%), Positives = 67/74 (90%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+NQG S ++LSN+FG+ +S L YM+KLIDHYGI I+KKGKNRYYSP
Sbjct: 1 MKLTYEDKVQIYELRNQGESFKRLSNQFGVNVSGLKYMVKLIDHYGINIIKKGKNRYYSP 60
Query: 80 ELKQEIIDKVLLEG 93
+LK+E+IDKVLLEG
Sbjct: 61 KLKREMIDKVLLEG 74
>gi|55820119|ref|YP_138561.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736104|gb|AAV59746.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 86
Score = 112 bits (280), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/79 (69%), Positives = 66/79 (83%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
+NCTPKVRQK+SNFWGVFIMKLTYEDKV IYEL+ QG + +LS +FG+ S L YM +L
Sbjct: 8 LNCTPKVRQKQSNFWGVFIMKLTYEDKVQIYELRKQGQTFNKLSKRFGVDASGLRYMTRL 67
Query: 61 IDHYGIEIVKKGKNRYYSP 79
I+ YGIEI+KKGK+RY SP
Sbjct: 68 IERYGIEIIKKGKHRYDSP 86
>gi|50914079|ref|YP_060051.1| Transposase [Streptococcus pyogenes MGAS10394]
gi|50903153|gb|AAT86868.1| Transposase [Streptococcus pyogenes MGAS10394]
Length = 97
Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/97 (55%), Positives = 73/97 (75%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+Y+DK+ IY L+ G S +L+N+FG+ SNL Y ++L+D YG+EIVKK K + YS
Sbjct: 1 MKLSYQDKLEIYRLRKSGLSWPELANQFGVNPSNLRYTVRLMDRYGVEIVKKQKYQAYSS 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIA 116
E+KQE+I+KVL +G+S VSLDYA P+ G L NWIA
Sbjct: 61 EMKQEMINKVLKDGQSLFSVSLDYAFPNPGTLANWIA 97
>gi|81097358|ref|ZP_00875649.1| conserved hypothetical protein [Streptococcus suis 89/1591]
gi|80976600|gb|EAP40192.1| conserved hypothetical protein [Streptococcus suis 89/1591]
Length = 107
Score = 106 bits (264), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/87 (65%), Positives = 70/87 (80%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+YEDK+ IYEL+ G S++ LSN+F I S + YM++LID YGI IVKKGKN YY P
Sbjct: 1 MKLSYEDKIKIYELRQSGQSIKNLSNQFTISESVIQYMLRLIDRYGINIVKKGKNTYYPP 60
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALP 106
ELKQE+IDKVL+EG S +V+LDYALP
Sbjct: 61 ELKQEMIDKVLIEGLSLNQVALDYALP 87
>gi|148994340|ref|ZP_01823583.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
gi|147927271|gb|EDK78304.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
Length = 70
Score = 104 bits (259), Expect = 3e-21, Method: Composition-based stats.
Identities = 57/70 (81%), Positives = 62/70 (88%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDPYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|148988647|ref|ZP_01820080.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP6-BS73]
gi|149021713|ref|ZP_01835744.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
gi|147925848|gb|EDK76923.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP6-BS73]
gi|147930174|gb|EDK81160.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
Length = 70
Score = 103 bits (258), Expect = 4e-21, Method: Composition-based stats.
Identities = 57/70 (81%), Positives = 63/70 (90%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I+KV
Sbjct: 61 DLKQEMINKV 70
>gi|148983954|ref|ZP_01817273.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP3-BS71]
gi|148992315|ref|ZP_01822038.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
gi|148993379|ref|ZP_01822896.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
gi|148997076|ref|ZP_01824730.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP11-BS70]
gi|149004055|ref|ZP_01828861.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP14-BS69]
gi|147756776|gb|EDK63816.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP11-BS70]
gi|147757956|gb|EDK64964.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP14-BS69]
gi|147924101|gb|EDK75213.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP3-BS71]
gi|147927934|gb|EDK78954.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
gi|147928941|gb|EDK79953.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
Length = 70
Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats.
Identities = 57/70 (81%), Positives = 62/70 (88%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|15901436|ref|NP_346040.1| IS3-Spn1, hypothetical protein, interruption [Streptococcus
pneumoniae TIGR4]
gi|14973087|gb|AAK75680.1| IS3-Spn1, hypothetical protein, interruption [Streptococcus
pneumoniae TIGR4]
Length = 84
Score = 103 bits (256), Expect = 8e-21, Method: Composition-based stats.
Identities = 54/68 (79%), Positives = 61/68 (89%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIID 87
+LKQE+I+
Sbjct: 61 DLKQEMIN 68
>gi|149006658|ref|ZP_01830344.1| hypothetical protein CGSSp18BS74_05352 [Streptococcus pneumoniae
SP18-BS74]
gi|147761573|gb|EDK68537.1| hypothetical protein CGSSp18BS74_05352 [Streptococcus pneumoniae
SP18-BS74]
Length = 70
Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 63/70 (90%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I+KV
Sbjct: 61 DLKQEMINKV 70
>gi|149007210|ref|ZP_01830874.1| hypothetical protein CGSSp18BS74_05156 [Streptococcus pneumoniae
SP18-BS74]
gi|147761248|gb|EDK68215.1| hypothetical protein CGSSp18BS74_05156 [Streptococcus pneumoniae
SP18-BS74]
Length = 70
Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 63/70 (90%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+Y+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLSYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I+KV
Sbjct: 61 DLKQEMINKV 70
>gi|116516401|ref|YP_816003.1| hypothetical protein SPD_0499 [Streptococcus pneumoniae D39]
gi|148986077|ref|ZP_01819098.1| hypothetical protein CGSSp3BS71_11981 [Streptococcus pneumoniae
SP3-BS71]
gi|149010523|ref|ZP_01831894.1| hypothetical protein CGSSp19BS75_04192 [Streptococcus pneumoniae
SP19-BS75]
gi|116076977|gb|ABJ54697.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
gi|147765004|gb|EDK71933.1| hypothetical protein CGSSp19BS75_04192 [Streptococcus pneumoniae
SP19-BS75]
gi|147921911|gb|EDK73037.1| hypothetical protein CGSSp3BS71_11981 [Streptococcus pneumoniae
SP3-BS71]
Length = 70
Score = 102 bits (254), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 62/70 (88%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|148992515|ref|ZP_01822210.1| hypothetical protein CGSSp9BS68_08852 [Streptococcus pneumoniae
SP9-BS68]
gi|147928832|gb|EDK79845.1| hypothetical protein CGSSp9BS68_08852 [Streptococcus pneumoniae
SP9-BS68]
Length = 70
Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 62/70 (88%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+Y+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLSYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|148986317|ref|ZP_01819189.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP3-BS71]
gi|147921785|gb|EDK72916.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP3-BS71]
Length = 70
Score = 102 bits (253), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 62/70 (88%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL Y+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLNYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I+KV
Sbjct: 61 DLKQEMINKV 70
>gi|149010808|ref|ZP_01832179.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
gi|147765289|gb|EDK72218.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
Length = 70
Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 61/70 (87%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGY LE+LSNKFGI SNL YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYILEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|149021305|ref|ZP_01835551.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
gi|147930406|gb|EDK81390.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
Length = 70
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/70 (78%), Positives = 63/70 (90%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLI+ YGIE VKKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLINRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I++V
Sbjct: 61 DLKQEMINQV 70
>gi|116516093|ref|YP_815869.1| hypothetical protein SPD_0359 [Streptococcus pneumoniae D39]
gi|116076669|gb|ABJ54389.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
Length = 70
Score = 101 bits (251), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/70 (78%), Positives = 62/70 (88%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+Y+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLSYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|15902930|ref|NP_358480.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
gi|15458491|gb|AAK99690.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
Length = 65
Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats.
Identities = 53/62 (85%), Positives = 56/62 (90%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 3 MNYTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 62
Query: 61 ID 62
ID
Sbjct: 63 ID 64
>gi|149006680|ref|ZP_01830366.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP18-BS74]
gi|147761595|gb|EDK68559.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP18-BS74]
Length = 70
Score = 100 bits (248), Expect = 7e-20, Method: Composition-based stats.
Identities = 56/70 (80%), Positives = 61/70 (87%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKLID YGIE KKGKNRYYSP
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFGKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIYKV 70
>gi|15902795|ref|NP_358345.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
gi|15458345|gb|AAK99555.1| Degenerate transposase (orf1) [Streptococcus pneumoniae R6]
Length = 70
Score = 99.8 bits (247), Expect = 7e-20, Method: Composition-based stats.
Identities = 54/70 (77%), Positives = 61/70 (87%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKL+Y+DKV IYEL+ QGYSLE+LSNKFGI N+ YMIKLID YGIE VKKGKNRYYSP
Sbjct: 1 MKLSYDDKVQIYELRKQGYSLEKLSNKFGINNFNIRYMIKLIDRYGIEFVKKGKNRYYSP 60
Query: 80 ELKQEIIDKV 89
+LKQE+I KV
Sbjct: 61 DLKQEMIHKV 70
>gi|148984726|ref|ZP_01817994.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP3-BS71]
gi|149010370|ref|ZP_01831741.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
gi|147764851|gb|EDK71780.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP19-BS75]
gi|147923117|gb|EDK74232.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP3-BS71]
Length = 63
Score = 99.8 bits (247), Expect = 8e-20, Method: Composition-based stats.
Identities = 53/62 (85%), Positives = 56/62 (90%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 1 MNYTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 60
Query: 61 ID 62
ID
Sbjct: 61 ID 62
>gi|19704121|ref|NP_603683.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19704775|ref|NP_604337.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19714329|gb|AAL94982.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19715105|gb|AAL95636.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 169
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/122 (45%), Positives = 82/122 (67%)
Query: 21 KLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPE 80
KLT EDK+ I+E + G ++ L+ F I SN+ Y+I LI+ YG I++KGKNR YS E
Sbjct: 3 KLTREDKIEIFERRKMGETIASLAKAFNIHESNIKYLIALIEKYGNNILRKGKNRAYSKE 62
Query: 81 LKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKP 140
K + I++VL+ S +V++D L S G+L NW++++K+N Y +VEK +GR PK KP
Sbjct: 63 FKLQAINRVLVNYESVRQVAIDIGLASDGILHNWLSKFKENGYNVVEKKKGRKPKSMTKP 122
Query: 141 KK 142
KK
Sbjct: 123 KK 124
>gi|148988428|ref|ZP_01819875.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP6-BS73]
gi|149002535|ref|ZP_01827469.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP14-BS69]
gi|149019575|ref|ZP_01834894.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
gi|147759472|gb|EDK66464.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP14-BS69]
gi|147926109|gb|EDK77183.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP6-BS73]
gi|147930950|gb|EDK81930.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP23-BS72]
Length = 63
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/62 (83%), Positives = 56/62 (90%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKL
Sbjct: 1 MNYTPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKL 60
Query: 61 ID 62
ID
Sbjct: 61 ID 62
>gi|148998580|ref|ZP_01826020.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP11-BS70]
gi|147755578|gb|EDK62625.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP11-BS70]
Length = 63
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/62 (82%), Positives = 55/62 (88%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNC PKVRQKKSNFWGVFIMKLTY+DKV IYEL+ QGYSLE+LSNKF I SN+ YMIKL
Sbjct: 1 MNCPPKVRQKKSNFWGVFIMKLTYDDKVQIYELRKQGYSLEKLSNKFEINNSNIRYMIKL 60
Query: 61 ID 62
ID
Sbjct: 61 ID 62
>gi|148992881|ref|ZP_01822500.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
gi|147928333|gb|EDK79349.1| Degenerate transposase (orf1) [Streptococcus pneumoniae SP9-BS68]
Length = 63
Score = 97.8 bits (242), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/62 (83%), Positives = 55/62 (88%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MN TPKVRQKKSNFWGVFIMKL Y+DKV IYEL+ QGYSLE+LSNKFGI SNL YMIKL
Sbjct: 1 MNYTPKVRQKKSNFWGVFIMKLNYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKL 60
Query: 61 ID 62
ID
Sbjct: 61 ID 62
>gi|19705192|ref|NP_602687.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713135|gb|AAL93986.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 169
Score = 97.8 bits (242), Expect = 3e-19, Method: Composition-based stats.
Identities = 55/141 (39%), Positives = 89/141 (63%), Gaps = 4/141 (2%)
Query: 21 KLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPE 80
KLT E+K+ IYE + G + L+ F + SN+ Y+I LI +G +I++K KNR YS +
Sbjct: 3 KLTRENKIEIYERRKNGETFSSLAKAFDVHKSNIEYLIALIKKHGFDILRKDKNRLYSKD 62
Query: 81 LKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKP 140
K +II+++L+ S V++D P+ +L NW++++K+N Y +VEK +GR PK KP
Sbjct: 63 FKLQIINRILVNHESINSVAIDIGFPAPSILHNWLSKFKENEYNVVEKKKGRKPKSMTKP 122
Query: 141 KKKIGRNDRARATSERIRISE 161
KK ND+ + E+I++ E
Sbjct: 123 KK----NDKVLSEKEKIKLLE 139
>gi|55820912|ref|YP_139354.1| ISSpn1, transposase, IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736897|gb|AAV60539.1| ISSpn1, transposase, IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 72
Score = 96.7 bits (239), Expect = 7e-19, Method: Composition-based stats.
Identities = 59/105 (56%), Positives = 64/105 (60%), Gaps = 35/105 (33%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKL 60
MNCTPKVRQKKSNFWGVFIMKLTYEDKV IYEL+
Sbjct: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKVQIYELR-------------------------- 34
Query: 61 IDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYAL 105
K+GKNRYYSP+LK+E+IDKVLLEG SQ V LDY L
Sbjct: 35 ---------KQGKNRYYSPKLKREMIDKVLLEGCSQQSVCLDYGL 70
>gi|19703820|ref|NP_603382.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713970|gb|AAL94681.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 169
Score = 94.7 bits (234), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 80/122 (65%)
Query: 21 KLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPE 80
KLT E+K+ I+E + G ++ L+ F I SN+ Y+I LI+ YG I++KGKNR YS E
Sbjct: 3 KLTREEKIEIFERRKMGETISSLAKAFNIHESNIKYLIALIEKYGNNILRKGKNRAYSKE 62
Query: 81 LKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKP 140
K + I+++L+ S V+LD L S +L NW++++K+N Y +VEK +GR PK KP
Sbjct: 63 FKLQAINRILINHESINSVALDIGLVSASILHNWLSKFKENEYNVVEKKKGRKPKSMTKP 122
Query: 141 KK 142
KK
Sbjct: 123 KK 124
>gi|19704175|ref|NP_603737.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19714393|gb|AAL95036.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 169
Score = 94.7 bits (234), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/122 (44%), Positives = 80/122 (65%)
Query: 21 KLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPE 80
KLT E+K+ I+E + G ++ L+ F I SN+ Y+I LI+ YG I++KGKNR YS E
Sbjct: 3 KLTREEKIEIFERRKMGETIASLAKAFNIHESNIKYLIALIEKYGNNILRKGKNRAYSKE 62
Query: 81 LKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKP 140
K + I+++L+ S V+LD L S +L NW++++K+N Y +VEK +GR PK KP
Sbjct: 63 FKLQAINRILINHESINSVALDIGLVSASILHNWLSKFKENEYNVVEKKKGRKPKSMTKP 122
Query: 141 KK 142
KK
Sbjct: 123 KK 124
>gi|34762854|ref|ZP_00143838.1| Transposase [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27887462|gb|EAA24548.1| Transposase [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 169
Score = 89.7 bits (221), Expect = 7e-17, Method: Composition-based stats.
Identities = 52/122 (42%), Positives = 77/122 (63%)
Query: 21 KLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPE 80
KLT EDK+ IYE + +G ++ L+ F I S + Y I LI +G I++ GKNR YS E
Sbjct: 3 KLTKEDKIEIYERRLKGETIPALAKTFNITESKIKYFIALIKKHGYTILRNGKNRIYSKE 62
Query: 81 LKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKP 140
K + I+++L S V++D LPS +L NW+ ++K+N Y +VEK +GR PK+ KP
Sbjct: 63 FKLQAINRILSNYESVNSVAIDIGLPSDTILHNWLLKFKENGYNVVEKKKGRKPKVMTKP 122
Query: 141 KK 142
K+
Sbjct: 123 KE 124
>gi|55822736|ref|YP_141177.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55738721|gb|AAV62362.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 59
Score = 82.4 bits (202), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/57 (71%), Positives = 48/57 (84%)
Query: 49 IKISNLSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYAL 105
+ +S L YM+KLIDHYGI I+KKGKNRYYSP+LK+E+IDKVLLEG SQ V LDY L
Sbjct: 1 MNVSGLKYMVKLIDHYGINIIKKGKNRYYSPKLKREMIDKVLLEGCSQQSVCLDYGL 57
>gi|51860775|gb|AAU11512.1| transposase [Lactobacillus helveticus]
Length = 411
Score = 81.6 bits (200), Expect = 2e-14, Method: Composition-based stats.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 11/161 (6%)
Query: 21 KLTYEDKVLIY-ELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
K E K+ IY + K++ S+ QLS + + ++NL YM++LID +G +I+ K R YS
Sbjct: 3 KFNKEQKIEIYRKWKDEKISISQLSKAYKMNLANLDYMLRLIDMHGTDILNTRK-RVYSK 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
+ K++ I++ + +S +++SL+ S G L NW+ +YK+N Y + K +GRP + R
Sbjct: 62 KFKEQTIEQAIFGTKSDVQLSLELGFKSIGRLNNWLREYKENGYNFIIKQKGRPARGQRG 121
Query: 140 PKKKIGRNDR---------ARATSERIRISESGECCSKKVE 171
K G +R A A ERIR G K+ E
Sbjct: 122 SKIAQGTGERDPKAERRKLAIAYCERIRKKTEGLGSGKRSE 162
>gi|42519217|ref|NP_965147.1| hypothetical protein LJ1292 [Lactobacillus johnsonii NCC 533]
gi|41583505|gb|AAS09113.1| hypothetical protein LJ_1292 [Lactobacillus johnsonii NCC 533]
Length = 164
Score = 81.3 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 21 KLTYEDKVLIYE-LKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
KL+ +DK+ IY + SL QL ++ ++ NL Y+I+LID +G++I+ K + Y S
Sbjct: 3 KLSKQDKIYIYNNWERYHKSLSQLGREYRVRPDNLYYLIRLIDLHGLKILNKSYSSY-SV 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRK 139
E K+ I ++L+ +VSLD L S GM+ NW+ +YK++ ++ +GRP ++
Sbjct: 62 EFKKTAIKRILINDEPATQVSLDLGLRSSGMIFNWLRKYKEDEENVINHKKGRPSHEKQR 121
Query: 140 PKKKIGRNDRARATSERIRISESGECCSKKV 170
P N RA TS+R++ +ES C K++
Sbjct: 122 PT-----NPRASKTSKRLKTAESQAYCRKRI 147
>gi|116628158|ref|YP_820777.1| Transposase [Streptococcus thermophilus LMD-9]
gi|116101435|gb|ABJ66581.1| Transposase [Streptococcus thermophilus LMD-9]
Length = 69
Score = 80.1 bits (196), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 33 LKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLE 92
++ QG QLS +FG+ S L YM +LI+ YGIEI+KKGKN YYSPELKQE+IDKVLLE
Sbjct: 1 MRKQGQIFNQLSKRFGVDASGLKYMTRLIERYGIEIIKKGKNCYYSPELKQEMIDKVLLE 60
Query: 93 GRSQ 96
GRSQ
Sbjct: 61 GRSQ 64
>gi|116627244|ref|YP_819863.1| Transposase [Streptococcus thermophilus LMD-9]
gi|116100521|gb|ABJ65667.1| Transposase [Streptococcus thermophilus LMD-9]
Length = 63
Score = 79.0 bits (193), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
MKLTYEDKV IYEL+ QG S ++LS +FG+ S L YM +LID YGI I+KKGKNRYYSP
Sbjct: 1 MKLTYEDKVQIYELRKQGESFKRLSKRFGVDASGLRYMTRLIDRYGINIIKKGKNRYYSP 60
Query: 80 ELK 82
+LK
Sbjct: 61 KLK 63
>gi|149004324|ref|ZP_01829084.1| hypothetical protein CGSSp14BS69_05552 [Streptococcus pneumoniae
SP14-BS69]
gi|147757701|gb|EDK64717.1| hypothetical protein CGSSp14BS69_05552 [Streptococcus pneumoniae
SP14-BS69]
Length = 50
Score = 74.3 bits (181), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/50 (78%), Positives = 43/50 (86%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIV 69
MKLTY+DKV IYEL+ QGYSLE+LSNKFGI SN+ YMIKLID YGIE V
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNIRYMIKLIDRYGIEFV 50
>gi|19703480|ref|NP_603042.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19713564|gb|AAL94341.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 95
Score = 71.2 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 59/93 (63%)
Query: 21 KLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSPE 80
KLT EDK+ IYE + G ++ L+ F I S + Y+I LI +G +I++ GKNRYYS E
Sbjct: 3 KLTREDKIEIYERRKNGETISSLAKSFNIHESKIKYLIVLIKKHGYDILRNGKNRYYSRE 62
Query: 81 LKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPN 113
K + I++VL+ S +V++D L S G+L N
Sbjct: 63 FKLQTINRVLVNYESVRQVAIDIGLASDGILHN 95
>gi|58337980|ref|YP_194565.1| transposase [Lactobacillus acidophilus NCFM]
gi|58255297|gb|AAV43534.1| transposase [Lactobacillus acidophilus NCFM]
Length = 246
Score = 69.7 bits (169), Expect = 7e-11, Method: Composition-based stats.
Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 21 KLTYEDKVLIYE---LKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
KLT +DK+ I+E L+N+G + L K+GI+ N++Y+IKLI +G I+ K Y
Sbjct: 3 KLTKQDKIYIFEEWTLENRGGTY--LGKKYGIRRENVNYLIKLIKIHGFSILDKPYTNY- 59
Query: 78 SPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMG 137
S E K+ I +VL E + V+LD L S +L NW YK+N Y +V K +GR
Sbjct: 60 SKEYKERAIKRVLFENETVNAVALDLGLTSRSILSNWSHSYKENGYNVVIKKKGRLTHEQ 119
Query: 138 RKPKKKIGRNDRARATSERIRISESGEC---CSKKVERTP--IEGRKRARRKTEI 187
K DR RA ER + S E C K++ + + +++ KTEI
Sbjct: 120 EKV-------DRTRAAQERKHRAASPEFKAYCRKRIYKKIGCLGSKEKKPTKTEI 167
>gi|58336474|ref|YP_193059.1| transposase [Lactobacillus acidophilus NCFM]
gi|58253791|gb|AAV42028.1| transposase [Lactobacillus acidophilus NCFM]
Length = 413
Score = 69.7 bits (169), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 21 KLTYEDKVLIY-ELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
KL + ++ IY + +N SL ++++ + S L YM+ LID +GIEI K K ++
Sbjct: 3 KLNKKQRLKIYNDWRNGNKSLSVIASEIKLNRSTLQYMVNLIDRHGIEIYDKSK-ELFTK 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGR 132
E K++ I + L S ++SLD L S+G+L NWI +YKKN Y +V K +GR
Sbjct: 62 EFKEKAIVRSLTGNNSINQLSLDLGLRSNGILYNWIREYKKNGYNVVIKKKGR 114
>gi|58337741|ref|YP_194326.1| transposase [Lactobacillus acidophilus NCFM]
gi|58255058|gb|AAV43295.1| transposase [Lactobacillus acidophilus NCFM]
Length = 413
Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 21 KLTYEDKVLIY-ELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
KL + ++ IY + +N SL ++++ + S L YM+ LID +GIEI K K ++
Sbjct: 3 KLNKKQRLKIYNDWRNGNKSLSVIASEIKLNRSTLQYMVNLIDRHGIEIYDKSK-ELFTK 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGR 132
E K++ I + L S ++SLD L S+G+L NWI +YKKN Y +V K +GR
Sbjct: 62 EFKEKAIVRSLTGNNSINQLSLDLGLRSNGILYNWIREYKKNGYNVVIKKKGR 114
>gi|58338114|ref|YP_194699.1| transposase [Lactobacillus acidophilus NCFM]
gi|58255431|gb|AAV43668.1| transposase [Lactobacillus acidophilus NCFM]
Length = 460
Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 21 KLTYEDKVLIY-ELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
KL + ++ IY + +N SL ++++ + S L YM+ LID +GIEI K K ++
Sbjct: 3 KLNKKQRLKIYNDWRNGNESLSVIASEIKLNRSTLQYMVNLIDRHGIEIYDKSK-ELFTK 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGR 132
E K++ I + L S ++SLD L S+G+L NWI +YKKN Y +V K +GR
Sbjct: 62 EFKEKAIVRSLTGNNSINQLSLDLGLRSNGILYNWIREYKKNGYNVVIKKKGR 114
>gi|58336939|ref|YP_193524.1| transposase [Lactobacillus acidophilus NCFM]
gi|58337575|ref|YP_194160.1| transposase [Lactobacillus acidophilus NCFM]
gi|58254256|gb|AAV42493.1| transposase [Lactobacillus acidophilus NCFM]
gi|58254892|gb|AAV43129.1| transposase [Lactobacillus acidophilus NCFM]
Length = 460
Score = 69.3 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 21 KLTYEDKVLIY-ELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
KL + ++ IY + +N SL ++++ + S L YM+ LID +GIEI K K ++
Sbjct: 3 KLNKKQRLKIYNDWRNGNKSLSVIASEIKLNRSTLQYMVNLIDRHGIEIYDKSK-ELFTK 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGR 132
E K++ I + L S ++SLD L S+G+L NWI +YKKN Y +V K +GR
Sbjct: 62 EFKEKAIVRSLTGNNSINQLSLDLGLRSNGILYNWIREYKKNGYNVVIKKKGR 114
>gi|55823363|ref|YP_141804.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
gi|55739348|gb|AAV62989.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus CNRZ1066]
Length = 116
Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 3/63 (4%)
Query: 99 VSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPK---KKIGRNDRARATSE 155
VSLDY PS GMLPNWIAQYKKN YT++EK RGR PKMGRK K K++ +R + +E
Sbjct: 9 VSLDYCFPSGGMLPNWIAQYKKNGYTLLEKRRGRVPKMGRKRKKTWKEMTELERLQEENE 68
Query: 156 RIR 158
R+R
Sbjct: 69 RLR 71
>gi|58338194|ref|YP_194779.1| transposase [Lactobacillus acidophilus NCFM]
gi|58255511|gb|AAV43748.1| transposase [Lactobacillus acidophilus NCFM]
Length = 341
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 21 KLTYEDKVLIY-ELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYYSP 79
KL + ++ IY + +N SL ++++ + S L YM+ LID +GIEI K K ++
Sbjct: 3 KLNKKQRLKIYNDWRNGNKSLSVIASEIKLNRSTLQYMVNLIDRHGIEIYDKSK-ELFTK 61
Query: 80 ELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYKKNRYTIVEKTRGR 132
E K++ I + L S ++SLD L S+G+L NWI +YKKN Y +V K +GR
Sbjct: 62 EFKEKAIVRSLTGNNSINQLSLDLGLRSNGILYNWIREYKKNGYNVVIKKKGR 114
>gi|81097359|ref|ZP_00875650.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
gi|80976601|gb|EAP40193.1| IS861, transposase OrfA [Streptococcus suis 89/1591]
Length = 67
Score = 66.2 bits (160), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/56 (62%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
Query: 106 PSHGMLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPKK---KIGRNDRARATSERIR 158
P+ G LPNWIAQYKKN YTI+EKTRGRPPKMGRKPKK ++ +R + +ER++
Sbjct: 6 PNRGTLPNWIAQYKKNGYTILEKTRGRPPKMGRKPKKTWEEMTELERLQEENERLK 61
>gi|15146031|gb|AAK83661.1| transposase [Lactobacillus delbrueckii subsp. lactis]
Length = 420
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 57 MIKLIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIA 116
M+ LI +G +I+ + + +Y + K ID+VLL G + +VSLD L + G+L NW+
Sbjct: 1 MVDLIQKHGEDILDRPQQKY-TANFKLAAIDRVLLGGEALSQVSLDLGLTNTGILANWLR 59
Query: 117 QYKKNRYTIVEKTRGRPPKMGRKPKKKIGRNDRARATSERIRISESGECCSKKVERTPIE 176
+K++ YT++ K +GRPPK +K + + RA E + S C KK+ +
Sbjct: 60 SFKESGYTVITKKKGRPPKNAQKQGQTTDQR-AGRAGKE----AYSRACIHKKI--GGLN 112
Query: 177 GRKRARRKTEIVRGL 191
R RK E+ R +
Sbjct: 113 SRTEEPRKEELARAI 127
>gi|149006338|ref|ZP_01830050.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP18-BS74]
gi|147762115|gb|EDK69077.1| Degenerate transposase (orf1) [Streptococcus pneumoniae
SP18-BS74]
Length = 44
Score = 61.2 bits (147), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 37/43 (86%)
Query: 20 MKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLID 62
MKLTY+DKV IYEL+ QGYSLE+LSNKF I SNL YMIKLID
Sbjct: 1 MKLTYDDKVQIYELRKQGYSLEKLSNKFEINNSNLRYMIKLID 43
>gi|94500067|ref|ZP_01306602.1| putative protein, probably encoded by an unidentifed IS element
[Oceanobacter sp. RED65]
gi|94427925|gb|EAT12900.1| putative protein, probably encoded by an unidentifed IS element
[Oceanobacter sp. RED65]
Length = 194
Score = 59.3 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 1 MNCTPKVRQKKSNFWGVFIMKLTYEDKV-LIYELKNQGYSLEQLSNKFGIKISNLSYMIK 59
MNCTPKV + S+ WGVF+ K + E K+ I + SL+ +++K I +S+L ++
Sbjct: 5 MNCTPKVGHQ-SSLWGVFMSKYSKEQKIKAIQQFLKSNESLKSVADKLEIDLSSLKKWVR 63
Query: 60 LIDHYGIEIVKKGKNRYYSPELKQEIIDKVLLEGRSQIRVSLDYALPSHGMLPNWIAQYK 119
+G+ +K K Y+ K +++ V S + + + + +HG++ W QY+
Sbjct: 64 HYQQHGLAAFEK-KYTVYNAAFKLDVLKYVYSHNVSHQQAAAIFDIRNHGIIAKWRHQYQ 122
Query: 120 KNRY-TIVEKTRGRPPKMGRKP 140
+ + K +GR P +KP
Sbjct: 123 TGGFNALASKPKGRLPMTPKKP 144
>gi|55820913|ref|YP_139355.1| ISSpn1, transposase, IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736898|gb|AAV60540.1| ISSpn1, transposase, IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 184
Score = 54.3 bits (129), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/32 (78%), Positives = 27/32 (84%)
Query: 110 MLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPK 141
ML NWIAQYKKN YT++EK RGR PKMGRK K
Sbjct: 1 MLNNWIAQYKKNGYTLLEKRRGRVPKMGRKRK 32
>gi|19704778|ref|NP_604340.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19715113|gb|AAL95639.1| Transposase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 71
Score = 53.1 bits (126), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 18 FIMKLTYEDKVLIYELKNQGYSLEQLSNKFGIKISNLSYMIKLIDHYGIEIVKKGKNRYY 77
F+ KLT E+K+ IYE + G + L+ F + SN+ Y+I LI +G +I++K KNR Y
Sbjct: 4 FVSKLTRENKIEIYERRKNGETFSSLAKAFDVHKSNIEYLIALIKKHGFDILRKDKNRLY 63
Query: 78 SPELKQE 84
S E ++E
Sbjct: 64 SKEKRKE 70
>gi|55820832|ref|YP_139274.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
gi|55736817|gb|AAV60459.1| IS861, transposase (orf1), IS3 family, truncated [Streptococcus
thermophilus LMG 18311]
Length = 60
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Query: 110 MLPNWIAQYKKNRYTIVEKTRGRPPKMGRKPKKK---IGRNDRARATSERIR 158
ML NWIAQYKKN YT++EK RGR PKMGRKPKKK + +R +A +E +R
Sbjct: 1 MLNNWIAQYKKNGYTLLEKRRGRVPKMGRKPKKKPEEMTELERLQAENEYLR 52
Database: nr
Posted date: Sep 17, 2007 11:41 AM
Number of letters in database: 999,999,834
Number of sequences in database: 2,976,859
Database: /nucleus1/users/jsaw/ncbi/db/nr.01
Posted date: Sep 17, 2007 11:48 AM
Number of letters in database: 894,087,890
Number of sequences in database: 2,493,262
Lambda K H
0.318 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 691,174,425
Number of Sequences: 5470121
Number of extensions: 27921789
Number of successful extensions: 80524
Number of sequences better than 1.0e-05: 103
Number of HSP's better than 0.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 80417
Number of HSP's gapped (non-prelim): 105
length of query: 192
length of database: 1,894,087,724
effective HSP length: 125
effective length of query: 67
effective length of database: 1,210,322,599
effective search space: 81091614133
effective search space used: 81091614133
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)