Sorting nexin 15 (Snx15)

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Finding cDNAs

UGID:894687 UniGene Rn.104898 Rattus norvegicus (Norway rat) Snx15

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Sorting nexin 15 (Snx15)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001019923.1	sorting nexin 15	R. norvegicus	100.0	337
NP_081188.1	sorting nexin 15	M. musculus	97.3	336
NP_037438.2	sorting nexin 15 isoform A	H. sapiens	92.0	337
NP_001090475.1	sorting nexin 15	X. laevis	61.4	334
NP_001104707.1	sorting nexin-15	D. rerio	55.7	386

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	heart; embryonic tissue; artery; prostate; dorsal root ganglion; placenta; connective tissue; uncharacterized tissue; lung; kidney; spleen; inner ear; ovary; mixed; pancreas; nerve; brain; liver

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
Map position:	1q43
UniSTS entry:		RH127982

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC097481.1	Rattus norvegicus sorting nexin 15, mRNA (cDNA clone MGC:114550 IMAGE:7459091), complete cds	PA
	NM_001024752.1	Rattus norvegicus sorting nexin 15 (Snx15), mRNA	PA

EST sequences (10 of 43) [Show all sequences]

AA859308.1	Clone UI-R-E0-cj-c-01-0-UI	embryonic tissue	3' read	A
AA900800.1	Clone UI-R-E0-dn-h-12-0-UI	embryonic tissue	3' read	A
AI175885.1	Clone ROVBG73	ovary	3' read	A
AI176075.1	Clone ROVBK26	ovary	3' read	A
AI578235.1	Clone UI-R-G0-ui-c-12-0-UI	nerve	3' read	A
AI598766.1	Clone REMDW26	embryonic tissue	3' read	A
AI714181.1	Clone UI-R-AG1-aag-f-07-0-UI	heart	3' read	A
AW141878.1	Clone RGICN39	ovary	5' read	P
AW530591.1	Clone UI-R-C4-ala-a-08-0-UI	mixed	3' read
BE112423.1	Clone UI-R-BJ1-avm-e-04-0-UI	heart	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria