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Sample GSM78668 Query DataSets for GSM78668
Status Public on Oct 22, 2005
Title Ovaries_MTX_1
Sample type RNA
 
Channel 1
Source Name Methotrexate treated ovaries
Organism(s) Drosophila melanogaster
Characteristics MTX treated ovaries dissected from adult flies.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source Name Untreated ovaries
Organism(s) Drosophila melanogaster
Characteristics Untreated ovaries from adult flies
Extracted molecule total RNA
Label Cy3
 
 
Description Comparision between untreated and MTX treated ovaries.
Data processing Normalized by overall median adjustment
 
Submission date Oct 19, 2005
Contact name Joslynn Gayle Affleck
Organization name Queen's University
Department Biology
Lab Walker
Street address 116 Barrie St.
City Kingston
State/province ON
ZIP/Postal code K7L 3N6
Country Canada
 
Platform ID GPL1473
Series (1)
GSE3495 Effects of methotrexate on S3 Drosophila cells and Drosophila ovaries

Data table header descriptions
ID_REF
CH1_RAW Raw fluorescence intensity - Cy5
CH1_BKD Raw background fluorescence intensity - Cy5
CH1_AREA Spot area - Cy5
CH1_Signal_Noise_Ratio Signal to noise ratio - Cy5
CH2_RAW Raw fluorescence intensity - Cy3
CH2_BKD Raw background fluorescence intensity - Cy3
CH2_AREA Spot area - Cy3
CH2_Signal_Noise_Ratio Signal to noise ratio - Cy3
VALUE The ratio of CH2_Raw to CH1_Raw

Data table
ID_REF CH1_RAW CH1_BKD CH1_AREA CH1_Signal_Noise_Ratio CH2_RAW CH2_BKD CH2_AREA CH2_Signal_Noise_Ratio VALUE
1 2365.887695 24.321428 8900 34.522292 1156.847412 84.98214 11800 7.446852 2.14399408
2 2132.179932 14.178572 10000 39.790884 1536.181763 110.964287 9900 9.504953 1.629494426
3 1810.598022 43.357143 10200 13.637595 1312.172363 102.053574 11600 6.609636 1.596178766
4 1648.453003 25.410715 11700 21.671844 1251.434082 79.85714 12900 9.372025 1.521729647
5 2881.990967 35.55357 11000 30.534392 1928.529907 99.303574 11700 12.11486 1.771931868
6 3128.280029 32.82143 12500 31.427291 2066.190918 141.607147 13100 7.449081 1.80163182
7 2413.564697 34.82143 10800 27.191729 1639.02478 140.321426 12100 7.564619 1.725056422
8 2503.559326 28.339285 11800 24.521686 1525.633545 87.553574 13100 10.733712 1.870000258
9 1559.65625 22.803572 9600 19.065805 1219.109253 96.625 11900 8.023092 1.475474825
10 1768.318237 20 8800 28.377471 1175.564087 108.785713 11700 7.231672 1.70336565
11 1560.69043 37.017857 8400 16.514012 1155.191528 137.196426 9400 7.102699 1.545637622
12 1680.835205 41.410713 9100 15.491882 2114.508057 270.803558 6300 7.232802 0.875735553
13 1967.352905 40.535713 10200 22.331499 2089.777832 301.339294 9900 6.276388 1.117931138
14 1973.411743 54.089287 10200 16.897413 2928.529297 555.428589 6800 7.791803 0.688730499
15 2346.167969 57.375 13100 19.153652 2205.565918 337.785706 12900 7.044351 1.302682589
16 2777.738525 38.55357 13000 27.69478 2024.37793 154.839279 12700 10.106137 1.656445309
17 8767.086914 15.803572 12600 159.541725 4265.65625 198.357147 12800 17.878543 2.356827305
18 8691.643555 53.55357 12900 68.139882 4290.054688 136.196426 12800 23.041628 2.33702945
19 7104.613281 34.285713 11900 74.336109 5199.161133 152.517853 12400 28.055971 1.799169197
20 8132.941406 12.607142 11900 227.608357 6624.688477 154.928574 12200 31.970914 1.682810398

Total number of rows: 16896

Table truncated, full table size 1448 Kbytes.




Supplementary data files not provided
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